mRNA_P-littoralis_Contig200.129.4 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig200.129.4 vs. uniprot
Match: D7FPE3_ECTSI (Set and mynd domain containing n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FPE3_ECTSI) HSP 1 Score: 844 bits (2180), Expect = 2.390e-297 Identity = 460/576 (79.86%), Postives = 485/576 (84.20%), Query Frame = 1
Query: 1 MRFPGSGQTQILPENSHNGGXXXXXXXXXXXXXXR-----YSGCPSSXXXXXXXXXLRVPYRHGVCNSSSSKSKNN----HGSGCSSAGCSF--ARRRGQLDPRFQVRRNPARPLRGRGVFAVEAVPAGTQVLVAKQAAALPKSRYRPAFCRRCLTLLDKSLLIKCRRCEDRFCGKECVIAAAGEGTHEATCDFVEGLGEECLEKLGQRDNAAATEKEILRLTIECLSRRGAGLSDEEEWIEIDDLVLPEEEREGGCEGYDGADDGTLDGSVIREAQARLNSRGLGVSAEEIQTVHRRLRHNFHLVQPEPLGRLLPSTVIGVFPAASLVNHSCAANACFHSRRAGPGEPPLEYVLRCTTDVAAGEEVCVSYLAHCADAATKEGRRELLQNVWGFSCDCPRCENDSEPGASSGDWRVTRMLSNIEALLENAQSCSVREIQAGLRSQLEQGLQMLLAGPDISSRLQLQLAMRIDEVAIRRRMHGSLRFRSAQELADRLVRLGLDSGYTADLRFTMHREALRWAADARLEGSYRRGEQMMRASRDGLEEAIKVAAVCLGEGHPKTRALIECLRRFSPFA 1695
M FPG QTQ++ E S XXXXXXXXXXX Y S L VPYRH S SKNN HGSGCS ARRRGQLDPRFQVRRNPARP RGRG+FAVEAVPAGT+VLVAKQAAALP+ RYRPAFCRRCLTLLDKSLLIKCRRCEDRFCGKECVIAAAGEGTHE TC VEGLGEE L +LG+ DNAAATE +ILRLT+EC+SRRGAGLSDEEEWIEIDDLVLPE+E GG EG G GTL+ VIREAQARLN GL VSAEEIQTVHRRLR NFH VQPEPLGRLLP TV+GVFPAASLVNHSC NACFHSRRAGP PPLE LRCTTDV+AGEEVCVSYLAHCADAATKEGRRELLQNVWGFSCDCPRCE+D++PGASSGDWRVT+ML NIEALLENAQ+ SVREIQAGLR+QLEQGLQMLLAGPD+SSRLQLQLAMRIDEVA RRRMHGSLRFRSAQELADRLVR GLD+GYTADLRFTMHREALRWAADAR+EGSYRR EQ+ RASRD LEEAIKVAAVCLGEGHPKTRAL+ECLRRFSPFA
Sbjct: 19 MGFPGGSQTQVVAETSXXXXXXXXXXXXXXXIGSSSTTISYGDTASPTATAGRTLPLTVPYRHARITWSEPNSKNNGSSKHGSGCSXXXXXXXCARRRGQLDPRFQVRRNPARPKRGRGIFAVEAVPAGTEVLVAKQAAALPRDRYRPAFCRRCLTLLDKSLLIKCRRCEDRFCGKECVIAAAGEGTHEVTCGLVEGLGEEQLSELGRGDNAAATETDILRLTVECMSRRGAGLSDEEEWIEIDDLVLPEDE--GGGEGSGG---GTLEPDVIREAQARLNDGGLEVSAEEIQTVHRRLRRNFHTVQPEPLGRLLPPTVVGVFPAASLVNHSCEPNACFHSRRAGPEGPPLELALRCTTDVSAGEEVCVSYLAHCADAATKEGRRELLQNVWGFSCDCPRCEDDTKPGASSGDWRVTKMLQNIEALLENAQNRSVREIQAGLRAQLEQGLQMLLAGPDLSSRLQLQLAMRIDEVATRRRMHGSLRFRSAQELADRLVRQGLDTGYTADLRFTMHREALRWAADARVEGSYRRAEQLTRASRDSLEEAIKVAAVCLGEGHPKTRALVECLRRFSPFA 589
BLAST of mRNA_P-littoralis_Contig200.129.4 vs. uniprot
Match: A0A6H5KH60_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KH60_9PHAE) HSP 1 Score: 342 bits (876), Expect = 4.820e-106 Identity = 211/299 (70.57%), Postives = 224/299 (74.92%), Query Frame = 1
Query: 1 MRFPGSGQTQILPENSHNGGXXXXXXXXXXXXXXR------YSGCPSSXXXXXXXXXLRVPYRHGVCNSSSSKSKNN----HGSGCSSAGCSF--ARRRGQLDPRFQVRRNPARPLRGRGVFAVEAVPAGTQVLVAKQAAALPKSRYRPAFCRRCLTLLDKSLLIKCRRCEDRFCGKECVIAAAGEGTHEATCDFVEGLGEECLEKLGQRDNAAATEKEILRLTIECLSRRGAGLSDEEEWIEIDDLVLPEEEREGGCEGYDGADDGTLDGSVIREAQARLNSRGLGVSAEEIQTVHRR 861
M FPG QTQ++ E S G XXXXXXXXXXXXXX Y S L VPYRH S SKNN HGSGCS ARRRGQLDPRFQVRRNPARP RGRG+FAVEAVPAGT+VLVA+QAAALP+ RYRPAFCRRCLTLLDKSLLIKCRRCEDRFCGKECVIAAAGEGTHE TC VEGLGEE L +LG+ DNAAATE +ILRLT+EC+SRRGAGLSDEEEWIEIDDLVLPE+E G G GTL+ VIREAQARLN GL VSAEEIQTVHRR
Sbjct: 19 MGFPGGSQTQVVAETSETGSXXXXXXXXXXXXXXXXSTTISYGDTASPTATAGRTIPLTVPYRHARITWSEPNSKNNGSSKHGSGCSXXXXXXXCARRRGQLDPRFQVRRNPARPKRGRGIFAVEAVPAGTEVLVARQAAALPRDRYRPAFCRRCLTLLDKSLLIKCRRCEDRFCGKECVIAAAGEGTHEVTCGMVEGLGEEQLSELGRGDNAAATETDILRLTVECMSRRGAGLSDEEEWIEIDDLVLPEDE--GXXXXXXG---GTLEPDVIREAQARLNDGGLEVSAEEIQTVHRR 312
BLAST of mRNA_P-littoralis_Contig200.129.4 vs. uniprot
Match: D7FPE5_ECTSI (SET and MYND domain containing 1b n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FPE5_ECTSI) HSP 1 Score: 134 bits (338), Expect = 1.340e-29 Identity = 115/361 (31.86%), Postives = 169/361 (46.81%), Query Frame = 1
Query: 247 FARRRGQLDPRFQVRRNPARPLRGRGVFAVEAVPAGTQVLVAKQAAALPKSRYRPAFCRRCLTLLDK-SLLIKCRRCEDRFCG--KECVIAAAGEGTHE-ATCDFVEGLGEECLEKLGQRDNAAATEKEILRLTIECLSRRGAGLSDEEEWIEIDDLVLPEEEREGGCEGYDGADDGTLDGSVIREAQARLNSR-GLGVSAEEIQTVHRRLRHNFHLVQPEPLGRLLPSTVIGVFPAASLVNHSCAANACFH--SRRAGP-GEPPLEYVLRCTTDVAAGEEVCVSYLAHCADAATKEGRRELLQNVWGFSCDCPRCENDSEPGA------SSGDWRVTRML---SNIEALLENAQSCSVRE 1278
+ARR LD R +VR +P R GRG+FA+ +PAGT+V+ AAA+ R R C CL D L C FC K+ G H ATC+ + L C + +K+ LRL + RR AGL D+ EW ++ L + E A +L + + + + +S E++Q ++RR+ N H V P S V G+FP +LVNHSC N FH + + P G P ++ VLR ++ AG+E+C SYL+ + T RR+LL WGF C C RC +++E + D R +ML + I AL + + ++RE
Sbjct: 27 YARRTANLDARVEVRFDPKR---GRGLFALRDIPAGTEVMRVPAAAAVLLDRSRKGSCSGCLLPTDTVGSLEACHGFPLSFCAACKKATTVGGVSGVHNSATCELTKELNTICA-------TSGGIDKDSLRLAADVFVRRKAGLFDDSEWGLLNSLESHDNE----------AHTMSLAPAELHKCTRLFKTLVDTNISDEDVQAMYRRITRNAHTVSPNTSKPGFGS-VQGLFPCGALVNHSCLPNTFFHCVTESSSPEGRPVVKQVLRSIRNIRAGDELCYSYLSSGSAVGTVSERRDLLMG-WGFRCACARCLSEAEEEKRLRRQRTPIDERALKMLERLAQISALGQRENAPALRE 365
BLAST of mRNA_P-littoralis_Contig200.129.4 vs. uniprot
Match: A0A6A4UYV8_AMPAM (Histone-lysine N-trimethyltransferase SMYD5 n=4 Tax=Amphibalanus amphitrite TaxID=1232801 RepID=A0A6A4UYV8_AMPAM) HSP 1 Score: 68.2 bits (165), Expect = 3.460e-8 Identity = 40/128 (31.25%), Postives = 67/128 (52.34%), Query Frame = 1
Query: 808 NSRGLGVSAEEIQTVHRRLRHNFHLVQPEPLGRLLPSTVIGVFPAASLVNHSCAANACFHSRRAGPGEP--PLEYVLRCTTDVAAGEEVCVSYLAHCADAATKEGRRELLQNVWGFSCDCPRCENDSE 1185
N L + AEE + + + + + ++ E G L + ++P S NHSC NA PG P + V+ T D+AAGE++CVSYL CA ++ R ++L+ + F+C C RC ++++
Sbjct: 264 NCTNLDLPAEEHEKLDQVINQLYDDLEKEA-GCFLNNEGSALYPLQSSCNHSCTPNAM-------PGFPCDNFDLVMSATQDIAAGEQICVSYLDECALERSRHSRNKILRGNYLFNCQCARCRSEAD 383
BLAST of mRNA_P-littoralis_Contig200.129.4 vs. uniprot
Match: F2U089_SALR5 (Uncharacterized protein n=1 Tax=Salpingoeca rosetta (strain ATCC 50818 / BSB-021) TaxID=946362 RepID=F2U089_SALR5) HSP 1 Score: 66.6 bits (161), Expect = 1.190e-7 Identity = 39/89 (43.82%), Postives = 50/89 (56.18%), Query Frame = 1
Query: 919 TVIGVFPAASLVNHSCAANACFH----SRRAGPGEPPLEYVLRCTTDVAAGEEVCVSYLAHCADAATKEGRRELLQNVWGFSCDCPRCE 1173
T G + + NHSC NAC + S RA P + VLR +D+A GEEVC+SY+ D T RRE LQ ++ F+C CPRCE
Sbjct: 171 TTYGFYLRMAFCNHSCRPNACQYIDPNSTRARLNSPSI--VLRAVSDIAEGEEVCISYI-ELMD--TTPERREALQELYYFTCQCPRCE 254
BLAST of mRNA_P-littoralis_Contig200.129.4 vs. uniprot
Match: A0A813J9H5_POLGL (Hypothetical protein n=1 Tax=Polarella glacialis TaxID=89957 RepID=A0A813J9H5_POLGL) HSP 1 Score: 64.3 bits (155), Expect = 2.200e-7 Identity = 40/106 (37.74%), Postives = 51/106 (48.11%), Query Frame = 1
Query: 931 VFPAASLVNHSCAANACFHSRRAGPGEPPLEYVLRCTTDVAAGEEVCVSYLAHCADAATKEGR---RELLQNVWGFSCDCPRCENDSEPGASSGDWRVTRMLSNIE 1239
+F L+NHSCA N F R G L L DVAAGEE+ +SYL+ A E R R+ L+ VWGF C C RC ++ + T LS +E
Sbjct: 170 MFQVCRLMNHSCAPNVDFQIRWGEEGVATLR--LAAQRDVAAGEELNISYLSSAPGEALGEARSVRRKRLREVWGFDCACERCLAEAGEPENGSSRASTPSLSGLE 273
BLAST of mRNA_P-littoralis_Contig200.129.4 vs. uniprot
Match: A0A366PG95_VERDA (SET domain-containing protein n=4 Tax=Verticillium TaxID=1036719 RepID=A0A366PG95_VERDA) HSP 1 Score: 65.5 bits (158), Expect = 2.570e-7 Identity = 47/147 (31.97%), Postives = 69/147 (46.94%), Query Frame = 1
Query: 928 GVFPAASLVNHSCAANACFHSRRAGPGEPPLEYVLRCTTDVAAGEEVCVSYLAHCADAATKEGRRELLQNVWGFSCDCPRCENDSEPGASSGDWRVTRMLSNIEALLENAQSCSVREIQAGLRSQLEQGLQMLLAGPDISSRLQLQL 1368
GVFPA S +NH C NA + + G L + + D+AAGEE+ +SY+ A A RR + WGF C C RC E D RV + + L + A ++ +I+ L E+GL+ +AG ++ L L
Sbjct: 230 GVFPAISRLNHDCGPNAAAWTDKTG-----LVHRAFASKDIAAGEEISISYVDALAPRAE---RRARMAGSWGFECGCRRCAAGDE-----SDARVAEIKALEARLGDVAAKVTMGDIERYLELMKEEGLEGKMAGAYTTAALNYSL 363
BLAST of mRNA_P-littoralis_Contig200.129.4 vs. uniprot
Match: UPI001C7EF713 (uncharacterized protein n=1 Tax=Diaporthe citri TaxID=83186 RepID=UPI001C7EF713) HSP 1 Score: 64.7 bits (156), Expect = 3.080e-7 Identity = 35/84 (41.67%), Postives = 44/84 (52.38%), Query Frame = 1
Query: 928 GVFPAASLVNHSCAANACFHSRRAGPGEPPLEYVLRCTTDVAAGEEVCVSYLAHCADAATKEGRRELLQNVWGFSCDCPRCEND 1179
GV+P+AS NH+C N R G +V R D+AAGEE+C+SYL + +E R LL WGF C C RC D
Sbjct: 265 GVWPSASYFNHNCDPNT--DKERVG-----RTWVFRAKRDIAAGEEICISYLGNDM-GILREERSALLNKTWGFDCICRRCRGD 340
BLAST of mRNA_P-littoralis_Contig200.129.4 vs. uniprot
Match: A0A0G2I9J1_9PEZI (SET domain-containing protein n=1 Tax=Diaporthe ampelina TaxID=1214573 RepID=A0A0G2I9J1_9PEZI) HSP 1 Score: 65.5 bits (158), Expect = 4.370e-7 Identity = 36/90 (40.00%), Postives = 46/90 (51.11%), Query Frame = 1
Query: 928 GVFPAASLVNHSCAANACFHSRRAGPGEPPLEYVLRCTTDVAAGEEVCVSYLAHCADAATKEGRRELLQNVWGFSCDCPRCENDSEPGAS 1197
GV+P+AS NH+C N R G +V R D+AAGEE+C+SYL +E R LL+ WGF C C RC+ D S
Sbjct: 265 GVWPSASYFNHNCDPNT--DKERVG-----RTWVFRAKRDIAAGEEICISYLGKDM-GILREERTALLKKTWGFDCICQRCKGDDRSAHS 346
BLAST of mRNA_P-littoralis_Contig200.129.4 vs. uniprot
Match: A0A2J8DI53_VERDA (SET domain-containing protein n=3 Tax=Verticillium TaxID=1036719 RepID=A0A2J8DI53_VERDA) HSP 1 Score: 65.5 bits (158), Expect = 5.000e-7 Identity = 47/147 (31.97%), Postives = 69/147 (46.94%), Query Frame = 1
Query: 928 GVFPAASLVNHSCAANACFHSRRAGPGEPPLEYVLRCTTDVAAGEEVCVSYLAHCADAATKEGRRELLQNVWGFSCDCPRCENDSEPGASSGDWRVTRMLSNIEALLENAQSCSVREIQAGLRSQLEQGLQMLLAGPDISSRLQLQL 1368
GVFPA S +NH C NA + + G L + + D+AAGEE+ +SY+ A A RR + WGF C C RC E D RV + + L + A ++ +I+ L E+GL+ +AG ++ L L
Sbjct: 696 GVFPAISRLNHDCGPNAAAWTDKTG-----LVHRAFASKDIAAGEEISISYVDALAPRAE---RRARMAGSWGFECGCRRCAAGDE-----SDARVAEIKALEARLGDVAAKVTMGDIERYLELMKEEGLEGKMAGAYTTAALNYSL 829 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig200.129.4 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig200.129.4 >prot_P-littoralis_Contig200.129.4 ID=prot_P-littoralis_Contig200.129.4|Name=mRNA_P-littoralis_Contig200.129.4|organism=Pylaiella littoralis U1_48|type=polypeptide|length=566bp MRFPGSGQTQILPENSHNGGGGGGDSSGSSTATARYSGCPSSRSSSSTSTback to top mRNA from alignment at P-littoralis_Contig200:409009..416790+ Legend: polypeptideCDSUTR Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig200.129.4 ID=mRNA_P-littoralis_Contig200.129.4|Name=mRNA_P-littoralis_Contig200.129.4|organism=Pylaiella littoralis U1_48|type=mRNA|length=7782bp|location=Sequence derived from alignment at P-littoralis_Contig200:409009..416790+ (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig200:409009..416790+ >mRNA_P-littoralis_Contig200.129.4 ID=mRNA_P-littoralis_Contig200.129.4|Name=mRNA_P-littoralis_Contig200.129.4|organism=Pylaiella littoralis U1_48|type=CDS|length=1698bp|location=Sequence derived from alignment at P-littoralis_Contig200:409009..416790+ (Pylaiella littoralis U1_48)back to top |