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Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Stop | 1 |
| Start | 1 |
| Model size | 3645 |
| Hectar predicted targeting category | other localisation |
| Exons | 3 |
| Cds size | 2640 |
Relationships
The following UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1680789985.215598-UTR-P-littoralis_Contig200:386454..387451 | 1680789985.215598-UTR-P-littoralis_Contig200:386454..387451 | Pylaiella littoralis U1_48 | UTR | P-littoralis_Contig200 386455..387451 - |
| 1680789985.2647011-UTR-P-littoralis_Contig200:391460..391468 | 1680789985.2647011-UTR-P-littoralis_Contig200:391460..391468 | Pylaiella littoralis U1_48 | UTR | P-littoralis_Contig200 391461..391468 - |
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1680789985.2273998-CDS-P-littoralis_Contig200:387451..389074 | 1680789985.2273998-CDS-P-littoralis_Contig200:387451..389074 | Pylaiella littoralis U1_48 | CDS | P-littoralis_Contig200 387452..389074 - |
| 1680789985.238783-CDS-P-littoralis_Contig200:389970..390591 | 1680789985.238783-CDS-P-littoralis_Contig200:389970..390591 | Pylaiella littoralis U1_48 | CDS | P-littoralis_Contig200 389971..390591 - |
| 1680789985.253953-CDS-P-littoralis_Contig200:391064..391460 | 1680789985.253953-CDS-P-littoralis_Contig200:391064..391460 | Pylaiella littoralis U1_48 | CDS | P-littoralis_Contig200 391065..391460 - |
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig200.122.2 >prot_P-littoralis_Contig200.122.2 ID=prot_P-littoralis_Contig200.122.2|Name=mRNA_P-littoralis_Contig200.122.2|organism=Pylaiella littoralis U1_48|type=polypeptide|length=880bp
MELAKARRKREALEESDSEATSSLSSENENDCHGDRVVATNRLARTLTVS
PPRSTIAPNPRVSVATPAVAGEVLFPTGRQTTIKTPDRDVGRRLTRIRGV
VVRKTWETSIGWDMMARHVGGIEPEPGNNLPKVSVEIAKARREREAKEES
DSASDSSSSKAENDSDGHGGGGVAKNGFATKPTVSPPRPTIAVSSRLTIK
ALEPTGESLLPISRQAVTKTPETDVGRRHTKNRDVIGGDNDCEKEKCSTG
LDPRVRHDGGIAPEPARSIRKISPIVGEPSYSASAGTTKTMTPRGGKCGG
EDSDQDAIASKTEPREGKITTPGTLSERCVRESLHHRTVASSGFHANVLR
PLSRDNALRKALGDTVPALETSTSTSSGSTLEKPDVSADGTGLGREKNAG
RRPEAAQRPPGDRPQPEGKLEQQSGVQTHFPRPQTRAKGAENEETGGQEE
LRSNNQTTVSPAHSGDVDSDERAQVSSSNAEGAEANEKSPSQARSPMAPV
DISPQRGSNPVNTMGQEISRSTRVNAQAGSTLFPDLYLSPALQQNIVFFP
VSLNAISPPTTLPVLAGDRGSHSDGNEDSPMGVLDMARCSARHDGGSGKS
WASEPEAQRARIVAEATATLANVGSVRKSPSISSTELKCRGGGVRCNEKL
KNDRRAMMPSSWRPALIIAKERAPLVRDPWCVRILVEAAATLASSVKRSI
AIPSARTNAGVLSSGEDNGRDDVVKRKCQESSGDGSVYSSKSRKQCHFSV
TAQSRNSKSGVTTLHRWTFCGSRPSLQLPVIVDFGSCGLGGSSPRRPVRS
GRTNSPGEDSPGWRRSFQLPLITDFGSCGPGGSAPHRLVSRGRTRDHGKA
SPGSRHRPIGWSPPRKEVPAVGSEEGKHE* back to topmRNA from alignment at P-littoralis_Contig200:386455..391468- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_P-littoralis_Contig200.122.2 ID=mRNA_P-littoralis_Contig200.122.2|Name=mRNA_P-littoralis_Contig200.122.2|organism=Pylaiella littoralis U1_48|type=mRNA|length=5014bp|location=Sequence derived from alignment at P-littoralis_Contig200:386455..391468- (Pylaiella littoralis U1_48)
AGGCCACAATGGAGCTCGCGAAAGCTAGACGGAAGCGCGAAGCTTTGGAA
GAATCGGACTCTGAGGCTACTTCCTCACTGTCATCAGAAAATGAAAATGA
CTGCCACGGCGACAGGGTCGTGGCGACGAATAGGTTGGCCAGAACATTGA
CGGTGTCGCCCCCCCGGTCTACTATTGCGCCAAACCCGAGAGTCTCAGTC
GCGACACCAGCGGTAGCGGGGGAGGTTCTCTTTCCGACCGGCCGCCAAAC
GACCATCAAGACTCCAGATAGAGACGTCGGGCGTAGGCTCACTCGAATCC
GTGGTGTTGTTGTCCGGAAGACATGGGAAACTTCTATCGGTTGGGACATG
ATGGCTCGTCACGTCGGCGGTATCGAACCGGAACCAGGGAATAATCTACC
TAAGGTATCGCCTTTGATACATAGTTTTGTAACCCATGCCGTTGATCGTC
TATGTATCAAAGGACACGGGTGACAGCATGATACGGTGGGAAACTTCTAA
TTCAAGACATGGTCATTCAAATATATCAACCAACATGGTCAGATTAAACA
GGACGAGATCTTCTTTTCAAGCGTATTTTACGTAAGTTGTCGGATGTGTT
GGACCGACGCATACCGGTCGACAATTTGAATTGTATGACCATACATTCAG
ATCATCCGACCATGCCAGTCCGCATACAAGTGTAACGAATAACATCCTGC
CCAATTCGCAGTCATCAGATACACCCAGAATCTGCGCACGAGGTACATGT
TGGTCACACGCAAAAGCCTTCCGCGGTGAGTGAATCGTCAGGCTCCTCGC
GTATCACGTGGGTTGCGTCCCACCAATGCCCCCACTACGCTGTTGCACCC
GTTTCATCTTTCTCAATCCACACGTAGGTTTCAGTCGAAATCGCGAAGGC
TAGACGGGAGCGCGAAGCTAAGGAAGAATCAGACTCAGCCTCGGATTCTT
CGTCGTCAAAAGCAGAAAATGATAGCGACGGTCACGGTGGCGGGGGCGTA
GCGAAGAATGGGTTCGCGACAAAACCGACGGTCTCGCCTCCACGGCCGAC
TATTGCGGTAAGCTCGCGACTTACGATCAAGGCGCTAGAACCAACTGGGG
AGAGTCTATTACCGATCAGCCGGCAAGCCGTCACGAAGACTCCAGAAACA
GACGTCGGGCGTAGGCACACCAAAAATCGTGATGTTATTGGCGGTGACAA
CGACTGTGAAAAAGAGAAATGCTCTACTGGTTTGGACCCAAGGGTCCGCC
ACGATGGCGGTATTGCACCAGAACCTGCGAGAAGCATCCGCAAGATATCG
CCTATAGTGGGGGAGCCGAGCTACAGTGCTTCGGCTGGCACGACGAAGAC
GATGACACCAAGAGGAGGAAAGTGCGGCGGTGAAGATAGTGATCAGGATG
CGATTGCATCGAAAACAGAACCAAGGGAGGGCAAAATCACCACCCCGGGA
ACCTTGAGTGAGCGCTGTGTACGAGAAAGCCTCCATCATCGAACGGTGGT
GAGAAAGAGAAAACAAAATACTCCGGAGTATATTTTTTGTCCTGTGTTGT
AGGCGGTGCATCAGATCCGCGCGAGAAATCAAGTACCCGGAGGTGGCAGG
ACTGTTCAAACCCACAGGCCAGGAAGGTAGCTGGTGTGTAAATGTGTTGT
ATTGGTTTGAAGGCAGTGTGAACACCTGCCCCGACTTTTGTCGCCAACAG
AGGCGATTTGGTACATGTTGTTTGCTTGATCGGCAACTATACCAGAGTGC
CACATTCTGGTGAGTGTACGTTGATATGGCATGGAGGCAATGGAATATAC
CGTCGTTGTCCTGACGACAACGTAGACGCTGAGTGCGCAATCGAATAATT
GCTCACTGCGGGAGTTGAAGCCGTCACCAATCTCCCGAATGGGCGCTATA
TTTCGTGCTTGTCTCATAATCAATCGCTATTGTCGTCGCCCCGCTGGAAC
ATGGAGTGGTCCCAGGCCGGCAGAAGTCAGACCCTGATACACACAATAAT
GGATACCTGACAATTTTTAATTTCCTGGTGTCTCAATAATCATCGGAACG
CCATTCCTTCACAAAGCACTTGTTTTGTACGGAATCCTGGGTGACCGTAA
GAGCCCCAGCGATGAGTACTTTCGTACGCTGCAGAAGCAGCAAGAAGTTA
GACCGTATGATAGCGCTTAACACCGCCGTTCATCAAGGTCAAAGCTTTGC
TGCGCATGAGAAAGTTAGGGATGTGCCGCGAATGCTTGAAGCTTCTCTTC
TCGTCATTTAGAGAGAAAGCGCAAGCAAGCAGTAGAACAAATGATTCCAT
CACAAGATCACCTGGACCCCTTCGCTGCTACCGTGATAAATCCGTCGCAC
GAAACCCTTCGTTTGCTGCGGTGGGCGTCGCTCTTCTTAATCAGGCGAGC
TCGGGATTTCACGCCAACGTACTGCGACCCCTTTCAAGGGATAACGCGCT
ACGCAAAGCTTTAGGTGACACTGTCCCGGCGTTGGAAACAAGTACAAGCA
CCTCGTCGGGATCAACTCTTGAGAAACCCGATGTAAGTGCAGATGGCACA
GGATTGGGTAGGGAGAAAAACGCGGGGCGACGGCCAGAGGCAGCTCAAAG
GCCGCCAGGGGATCGACCTCAGCCAGAGGGGAAACTGGAGCAGCAGAGCG
GAGTGCAAACTCATTTTCCACGGCCACAGACTCGTGCAAAGGGCGCAGAG
AACGAAGAGACGGGAGGGCAGGAGGAATTACGAAGCAATAATCAAACTAC
GGTGTCGCCGGCCCACTCAGGAGATGTCGACTCTGACGAAAGGGCGCAAG
TGTCATCGTCGAACGCCGAGGGTGCAGAAGCGAACGAGAAGTCGCCCAGC
CAAGCCAGATCGCCTATGGCGCCTGTTGACATTTCTCCACAGCGAGGAAG
TAACCCTGTCAACACGATGGGACAGGAGATTTCCCGATCAACGCGGGTCA
ACGCCCAGGCGGGCAGTACGTTATTCCCGGATCTTTACCTCTCACCAGCG
CTTCAGCAGAACATCGTTTTTTTCCCAGTTTCGCTCAACGCGATTTCGCC
CCCGACTACGTTGCCGGTGTTGGCTGGGGATAGGGGCAGCCATAGCGATG
GGAACGAAGATAGTCCGATGGGGGTATTGGATATGGCACGTTGCAGTGCT
CGCCACGATGGTGGTTCCGGGAAGTCGTGGGCTTCGGAGCCAGAAGCACA
GCGTGCAAGGATTGTAGCGGAGGCAACAGCAACGTTGGCCAATGTAGGAA
GTGTGAGGAAATCACCATCAATATCATCTACCGAATTGAAGTGCCGTGGT
GGTGGCGTTCGCTGTAATGAAAAATTGAAAAACGACAGAAGGGCTATGAT
GCCGTCAAGCTGGCGGCCAGCATTAATAATAGCAAAAGAGAGGGCTCCTC
TCGTCAGAGACCCATGGTGTGTGAGGATTCTTGTGGAAGCAGCGGCAACG
TTGGCGAGTTCTGTGAAGAGATCAATAGCTATTCCATCCGCCCGAACGAA
TGCCGGTGTTCTGTCATCCGGAGAAGACAACGGCCGCGACGACGTTGTGA
AGAGAAAGTGCCAAGAAAGCAGCGGCGACGGCAGTGTCTACTCCTCTAAG
AGTCGCAAGCAATGCCATTTCTCAGTCACCGCGCAGTCTAGGAATAGCAA
GAGCGGCGTCACAACTTTGCACCGATGGACGTTTTGTGGGTCGAGGCCGT
CACTTCAGCTCCCAGTGATCGTTGACTTTGGTTCGTGTGGACTTGGCGGT
TCGTCTCCGCGGCGACCTGTTCGTAGCGGGAGAACTAATTCTCCAGGGGA
AGACAGCCCGGGATGGAGGCGATCATTTCAGCTTCCACTCATCACTGACT
TTGGATCGTGTGGACCTGGCGGTTCAGCACCGCACCGACTCGTGAGTCGC
GGGCGTACACGTGATCACGGCAAAGCCAGCCCGGGATCCCGACACAGACC
AATAGGGTGGTCCCCCCCTCGCAAGGAAGTTCCTGCCGTCGGCAGCGAAG
AAGGGAAACACGAGTAAGAGAAAACCTGCCCGATCCCAGCTAAACACAGC
GTTTGACACCATGTGTGTCGCGAGCATCTTTAGAGATAAGGGTTTAGCCG
CCGGTGGGGCTCAAGATAGGGCACGGACATGCACTTCAGATTTTGGGGCA
TCATCGTCATATTTTCGGCGGCCTGTTGAACGGGTAATGGTGGGAGCGGC
GGTGGCAGCGGCGATTCCATCTCAGGGGGTCACAGACAGCGCCTTTCTCT
ACCCATCTCTCGAATATTGAGCAGCACGAGCTTCTCGAGCAACCCTCCAC
GGGAAAAGTTTCCCCGGGCTGCGCCTGTGGCAGCCTTAAGTACCGTTGAG
CTCGGTCCGCTTAAGGCTTGACTACCCAGTGTCACACGCACTCGTGTCTG
GCCGCCGTGTGGTGGACAAAGACCCGGGAACCTGAGCCTCTGCTTACAAG
ACAAGGATAGCCAACGGCACCCAGGGAAAGGTAAAAACAAGGGAGGAACG
TGCCCTACGTTATCACCCCCCCCTCCACCCCCGGCAGGACACAATCTGCT
CGGCAACCTGATTGTGTGAGAACGTCACGGGGACGAACAGCTTGTACTTC
GCAACACATGTCATCCATTTCTGGGCCTAATGAGGGCGATACAACTTCGA
AACCTATACCGCGTTTGCGGCCGGTGGCCCTACTGTTGTTACCCTGTACG
TTTTTCGCTTTGGTGTACGAGTTGAGCGCGGGGTTTCTAGCTGAGCAATG
AAAAACGACTACAATGGCAAAGAAAAGAAAAATGAATAGCTGTATTTCCA
GTTGGAGGTGGAACCCCGTATACGTCAGGCTCGCCCTACAAGAAACTTTG
TATTTTGGAGCGAGTAAAGCTGGCTAGATTATATTGGGACACAATTCGAA
GCACTTGCGGCAACACCTGGGTCAAGAGCGGAAAGCGACATTTCTTTGAT
GAGTTTCACTGGACGCAAGTTGCAGTACACTTAAAACGAGGCTGGAGAAA
CAGCTCATGGCCAA back to topCoding sequence (CDS) from alignment at P-littoralis_Contig200:386455..391468- >mRNA_P-littoralis_Contig200.122.2 ID=mRNA_P-littoralis_Contig200.122.2|Name=mRNA_P-littoralis_Contig200.122.2|organism=Pylaiella littoralis U1_48|type=CDS|length=2640bp|location=Sequence derived from alignment at P-littoralis_Contig200:386455..391468- (Pylaiella littoralis U1_48)
ATGGAGCTCGCGAAAGCTAGACGGAAGCGCGAAGCTTTGGAAGAATCGGA
CTCTGAGGCTACTTCCTCACTGTCATCAGAAAATGAAAATGACTGCCACG
GCGACAGGGTCGTGGCGACGAATAGGTTGGCCAGAACATTGACGGTGTCG
CCCCCCCGGTCTACTATTGCGCCAAACCCGAGAGTCTCAGTCGCGACACC
AGCGGTAGCGGGGGAGGTTCTCTTTCCGACCGGCCGCCAAACGACCATCA
AGACTCCAGATAGAGACGTCGGGCGTAGGCTCACTCGAATCCGTGGTGTT
GTTGTCCGGAAGACATGGGAAACTTCTATCGGTTGGGACATGATGGCTCG
TCACGTCGGCGGTATCGAACCGGAACCAGGGAATAATCTACCTAAGGTTT
CAGTCGAAATCGCGAAGGCTAGACGGGAGCGCGAAGCTAAGGAAGAATCA
GACTCAGCCTCGGATTCTTCGTCGTCAAAAGCAGAAAATGATAGCGACGG
TCACGGTGGCGGGGGCGTAGCGAAGAATGGGTTCGCGACAAAACCGACGG
TCTCGCCTCCACGGCCGACTATTGCGGTAAGCTCGCGACTTACGATCAAG
GCGCTAGAACCAACTGGGGAGAGTCTATTACCGATCAGCCGGCAAGCCGT
CACGAAGACTCCAGAAACAGACGTCGGGCGTAGGCACACCAAAAATCGTG
ATGTTATTGGCGGTGACAACGACTGTGAAAAAGAGAAATGCTCTACTGGT
TTGGACCCAAGGGTCCGCCACGATGGCGGTATTGCACCAGAACCTGCGAG
AAGCATCCGCAAGATATCGCCTATAGTGGGGGAGCCGAGCTACAGTGCTT
CGGCTGGCACGACGAAGACGATGACACCAAGAGGAGGAAAGTGCGGCGGT
GAAGATAGTGATCAGGATGCGATTGCATCGAAAACAGAACCAAGGGAGGG
CAAAATCACCACCCCGGGAACCTTGAGTGAGCGCTGTGTACGAGAAAGCC
TCCATCATCGAACGGTGGCGAGCTCGGGATTTCACGCCAACGTACTGCGA
CCCCTTTCAAGGGATAACGCGCTACGCAAAGCTTTAGGTGACACTGTCCC
GGCGTTGGAAACAAGTACAAGCACCTCGTCGGGATCAACTCTTGAGAAAC
CCGATGTAAGTGCAGATGGCACAGGATTGGGTAGGGAGAAAAACGCGGGG
CGACGGCCAGAGGCAGCTCAAAGGCCGCCAGGGGATCGACCTCAGCCAGA
GGGGAAACTGGAGCAGCAGAGCGGAGTGCAAACTCATTTTCCACGGCCAC
AGACTCGTGCAAAGGGCGCAGAGAACGAAGAGACGGGAGGGCAGGAGGAA
TTACGAAGCAATAATCAAACTACGGTGTCGCCGGCCCACTCAGGAGATGT
CGACTCTGACGAAAGGGCGCAAGTGTCATCGTCGAACGCCGAGGGTGCAG
AAGCGAACGAGAAGTCGCCCAGCCAAGCCAGATCGCCTATGGCGCCTGTT
GACATTTCTCCACAGCGAGGAAGTAACCCTGTCAACACGATGGGACAGGA
GATTTCCCGATCAACGCGGGTCAACGCCCAGGCGGGCAGTACGTTATTCC
CGGATCTTTACCTCTCACCAGCGCTTCAGCAGAACATCGTTTTTTTCCCA
GTTTCGCTCAACGCGATTTCGCCCCCGACTACGTTGCCGGTGTTGGCTGG
GGATAGGGGCAGCCATAGCGATGGGAACGAAGATAGTCCGATGGGGGTAT
TGGATATGGCACGTTGCAGTGCTCGCCACGATGGTGGTTCCGGGAAGTCG
TGGGCTTCGGAGCCAGAAGCACAGCGTGCAAGGATTGTAGCGGAGGCAAC
AGCAACGTTGGCCAATGTAGGAAGTGTGAGGAAATCACCATCAATATCAT
CTACCGAATTGAAGTGCCGTGGTGGTGGCGTTCGCTGTAATGAAAAATTG
AAAAACGACAGAAGGGCTATGATGCCGTCAAGCTGGCGGCCAGCATTAAT
AATAGCAAAAGAGAGGGCTCCTCTCGTCAGAGACCCATGGTGTGTGAGGA
TTCTTGTGGAAGCAGCGGCAACGTTGGCGAGTTCTGTGAAGAGATCAATA
GCTATTCCATCCGCCCGAACGAATGCCGGTGTTCTGTCATCCGGAGAAGA
CAACGGCCGCGACGACGTTGTGAAGAGAAAGTGCCAAGAAAGCAGCGGCG
ACGGCAGTGTCTACTCCTCTAAGAGTCGCAAGCAATGCCATTTCTCAGTC
ACCGCGCAGTCTAGGAATAGCAAGAGCGGCGTCACAACTTTGCACCGATG
GACGTTTTGTGGGTCGAGGCCGTCACTTCAGCTCCCAGTGATCGTTGACT
TTGGTTCGTGTGGACTTGGCGGTTCGTCTCCGCGGCGACCTGTTCGTAGC
GGGAGAACTAATTCTCCAGGGGAAGACAGCCCGGGATGGAGGCGATCATT
TCAGCTTCCACTCATCACTGACTTTGGATCGTGTGGACCTGGCGGTTCAG
CACCGCACCGACTCGTGAGTCGCGGGCGTACACGTGATCACGGCAAAGCC
AGCCCGGGATCCCGACACAGACCAATAGGGTGGTCCCCCCCTCGCAAGGA
AGTTCCTGCCGTCGGCAGCGAAGAAGGGAAACACGAGTAA back to top
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