prot_P-littoralis_Contig200.111.2 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_P-littoralis_Contig200.111.2
Unique Name	prot_P-littoralis_Contig200.111.2
Type	polypeptide
Organism	Pylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length	300

Homology

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BLAST of mRNA_P-littoralis_Contig200.111.2 vs. uniprot
Match: A0A6H5JYC0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JYC0_9PHAE)

HSP 1 Score: 251 bits (641), Expect = 1.550e-79
Identity = 172/299 (57.53%), Postives = 188/299 (62.88%), Query Frame = 0

Query:    1 MGNTLASQKDGRSADAPRAAKDLNDLLPALRERFEELAGLPAEAAXXXXXXXXXVESSTAPEVSAQRLQDPTTAPGAGGGEQENRYVLFDDWSELPGPRGAHVARRLYAVLDANGDGRLDFEEFASAACLLKGSPDESKLALLFKMYGDASKGGFVGREGLKAFILDVIAASPPLXXXXXXXXXXXXXXXXXGSDGVSETPRPSASKTVLPHEKRTEGRAGVVAAADAACAAVLPQPDLEKELGGVLAGMARVVLAEYDADNDGWLKEKEWRAYLKQEEGSVGVFLKTLSDSVGKLLLP 299
            MGNT ASQKD  S +APRAAKDL+DLLPALRERFE+LAG+PA  A         V ++TA E   ++                           LPGPRGA VA+RLY VLDANGDGRL FEEFASAACLLKGSP ++KL LLF+MYGDAS+GG VGREGLKA ILDVIAASP  XXXXXXXXXXXXXXXXX                                            PD EKELGG+LA MA VVL E+DADNDG L EKEW+AYLKQEE SV  FL TLSDSVG LLLP
Sbjct:    1 MGNTSASQKDS-SVNAPRAAKDLDDLLPALRERFEDLAGIPASEAPQQPPRGAAV-ATTASECHVRQXXXXXXXXXX------XXXXXXXXXXYLPGPRGAEVAKRLYGVLDANGDGRLSFEEFASAACLLKGSPHQTKLELLFRMYGDASRGGLVGREGLKALILDVIAASPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX---------------------PDFEKELGGILAKMADVVLTEHDADNDGLLTEKEWKAYLKQEEDSVIAFLDTLSDSVGNLLLP 270

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BLAST of mRNA_P-littoralis_Contig200.111.2 vs. uniprot
Match: D7FPE9_ECTSI (EF-hand domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FPE9_ECTSI)

HSP 1 Score: 137 bits (346), Expect = 9.130e-37
Identity = 83/158 (52.53%), Postives = 95/158 (60.13%), Query Frame = 0

Query:    1 MGNTLASQKDGRSADAPRAAKDLNDLLPALRERFEELAGLPAEAAXXXXXXXXXVESSTAPEVSAQRLQDPTTAPGAGGGEQENRYVLFDDWSELPGPRGAHVARRLYAVLDANGDGRLDFEEFASAACLLKGSPDESKLALLFKMYGDASKGGFVGR 158
            MGNT ASQKD  SA+APRAAKDL+DLLPALRERFEELAGLPA  A         V ++     S   ++                      W  LPGPRGA VA+RLY VLDANGDGRL FEEFA AACLLKGSP ++KL    +   +A  G  VG+
Sbjct:    1 MGNTSASQKDS-SANAPRAAKDLDDLLPALRERFEELAGLPASEAPLPPPRGAAVATTA----SEGHVRXXXXXXXXXXXXXXXXXXXXXXWWYLPGPRGAEVAKRLYGVLDANGDGRLSFEEFAGAACLLKGSPHQTKLERCTETLAEA--GSSVGK 151

[Close]

BLAST of mRNA_P-littoralis_Contig200.111.2 vs. uniprot
Match: D7FPF0_ECTSI (EF-hand domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FPF0_ECTSI)

HSP 1 Score: 80.9 bits (198), Expect = 3.320e-16
Identity = 41/50 (82.00%), Postives = 41/50 (82.00%), Query Frame = 0

Query:  250 MARVVLAEYDADNDGWLKEKEWRAYLKQEEGSVGVFLKTLSDSVGKLLLP 299
            MA VVL EYDADNDG L EKEWRAYLKQEE SV  FL TLSDSVG LLLP
Sbjct:    1 MADVVLTEYDADNDGLLTEKEWRAYLKQEEDSVIAFLDTLSDSVGNLLLP 50

The following BLAST results are available for this feature:

BLAST of mRNA_P-littoralis_Contig200.111.2 vs. uniprot

BLAST of mRNA_P-littoralis_Contig200.111.2 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3


Match Name	E-value	Identity	Description
A0A6H5JYC0_9PHAE	1.550e-79	57.53	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
D7FPE9_ECTSI	9.130e-37	52.53	EF-hand domain-containing protein n=1 Tax=Ectocarp...	[more]
D7FPF0_ECTSI	3.320e-16	82.00	EF-hand domain-containing protein n=1 Tax=Ectocarp...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	1.10.238.10		coord: 80..289 e-value: 1.0E-15 score: 59.7
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 61..81
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 187..207
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..24
IPR018247	EF-Hand 1, calcium-binding site	PROSITE	PS00018	EF_HAND_1	coord: 112..124
IPR002048	EF-hand domain	PROSITE	PS50222	EF_HAND_2	coord: 99..134 score: 10.97069
IPR011992	EF-hand domain pair	SUPERFAMILY	47473	EF-hand	coord: 101..281

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
P-littoralis_Contig200	contig	P-littoralis_Contig200:345846..349113 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
Pylaiella littoralis U1_48 OGS1.0	2022-07-08

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_P-littoralis_Contig200.111.2	mRNA_P-littoralis_Contig200.111.2	Pylaiella littoralis U1_48	mRNA	P-littoralis_Contig200 345305..350579 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_P-littoralis_Contig200.111.2 ID=prot_P-littoralis_Contig200.111.2|Name=mRNA_P-littoralis_Contig200.111.2|organism=Pylaiella littoralis U1_48|type=polypeptide|length=300bp
MGNTLASQKDGRSADAPRAAKDLNDLLPALRERFEELAGLPAEAAAAAAA
VPIPVESSTAPEVSAQRLQDPTTAPGAGGGEQENRYVLFDDWSELPGPRG
AHVARRLYAVLDANGDGRLDFEEFASAACLLKGSPDESKLALLFKMYGDA
SKGGFVGREGLKAFILDVIAASPPLLAPPDLVVVADGDEGGGGSDGVSET
PRPSASKTVLPHEKRTEGRAGVVAAADAACAAVLPQPDLEKELGGVLAGM
ARVVLAEYDADNDGWLKEKEWRAYLKQEEGSVGVFLKTLSDSVGKLLLP*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR018247	EF_Hand_1_Ca_BS
IPR002048	EF_hand_dom
IPR011992	EF-hand-dom_pair