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Homology
BLAST of mRNA_P-littoralis_Contig200.111.2 vs. uniprot
Match: A0A6H5JYC0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JYC0_9PHAE) HSP 1 Score: 250 bits (639), Expect = 3.450e-76 Identity = 172/299 (57.53%), Postives = 188/299 (62.88%), Query Frame = 1
Query: 148 MGNTLASQKDGRSADAPRAAKDLNDLLPALRERFEELAGLPAEAAXXXXXXXXXVESSTAPEVSAQRLQDPTTAPGAGGGEQENRYVLFDDWSELPGPRGAHVARRLYAVLDANGDGRLDFEEFASAACLLKGSPDESKLALLFKMYGDASKGGFVGREGLKAFILDVIAASPPLXXXXXXXXXXXXXXXXXGSDGVSETPRPSASKTVLPHEKRTEGRAGVVAAADAACAAVLPQPDLEKELGGVLAGMARVVLAEYDADNDGWLKEKEWRAYLKQEEGSVGVFLKTLSDSVGKLLLP 1044
MGNT ASQKD S +APRAAKDL+DLLPALRERFE+LAG+PA A V ++TA E ++ LPGPRGA VA+RLY VLDANGDGRL FEEFASAACLLKGSP ++KL LLF+MYGDAS+GG VGREGLKA ILDVIAASP XXXXXXXXXXXXXXXXX PD EKELGG+LA MA VVL E+DADNDG L EKEW+AYLKQEE SV FL TLSDSVG LLLP
Sbjct: 1 MGNTSASQKDS-SVNAPRAAKDLDDLLPALRERFEDLAGIPASEAPQQPPRGAAV-ATTASECHVRQXXXXXXXXXX------XXXXXXXXXXYLPGPRGAEVAKRLYGVLDANGDGRLSFEEFASAACLLKGSPHQTKLELLFRMYGDASRGGLVGREGLKALILDVIAASPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX---------------------PDFEKELGGILAKMADVVLTEHDADNDGLLTEKEWKAYLKQEEDSVIAFLDTLSDSVGNLLLP 270
BLAST of mRNA_P-littoralis_Contig200.111.2 vs. uniprot
Match: D7FPE9_ECTSI (EF-hand domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FPE9_ECTSI) HSP 1 Score: 137 bits (345), Expect = 1.050e-34 Identity = 83/158 (52.53%), Postives = 95/158 (60.13%), Query Frame = 1
Query: 148 MGNTLASQKDGRSADAPRAAKDLNDLLPALRERFEELAGLPAEAAXXXXXXXXXVESSTAPEVSAQRLQDPTTAPGAGGGEQENRYVLFDDWSELPGPRGAHVARRLYAVLDANGDGRLDFEEFASAACLLKGSPDESKLALLFKMYGDASKGGFVGR 621
MGNT ASQKD SA+APRAAKDL+DLLPALRERFEELAGLPA A V ++ S ++ W LPGPRGA VA+RLY VLDANGDGRL FEEFA AACLLKGSP ++KL + +A G VG+
Sbjct: 1 MGNTSASQKDS-SANAPRAAKDLDDLLPALRERFEELAGLPASEAPLPPPRGAAVATTA----SEGHVRXXXXXXXXXXXXXXXXXXXXXXWWYLPGPRGAEVAKRLYGVLDANGDGRLSFEEFAGAACLLKGSPHQTKLERCTETLAEA--GSSVGK 151
BLAST of mRNA_P-littoralis_Contig200.111.2 vs. uniprot
Match: D7FPF0_ECTSI (EF-hand domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FPF0_ECTSI) HSP 1 Score: 80.5 bits (197), Expect = 2.070e-15 Identity = 41/50 (82.00%), Postives = 41/50 (82.00%), Query Frame = 1
Query: 895 MARVVLAEYDADNDGWLKEKEWRAYLKQEEGSVGVFLKTLSDSVGKLLLP 1044
MA VVL EYDADNDG L EKEWRAYLKQEE SV FL TLSDSVG LLLP
Sbjct: 1 MADVVLTEYDADNDGLLTEKEWRAYLKQEEDSVIAFLDTLSDSVGNLLLP 50
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
| Stop | 1 |
| Start | 1 |
| Seed ortholog | 4098.XP_009621908.1 |
| Preferred name | CBL04 |
| PFAMs | EF-hand_1,EF-hand_5,EF-hand_7 |
| Model size | 1588 |
| Max annot lvl | 35493|Streptophyta |
| KEGG ko | ko:K06268 |
| KEGG Pathway | ko04010,ko04020,ko04022,ko04114,ko04218,ko04310,ko04360,ko04370,ko04380,ko04650,ko04658,ko04659,ko04660,ko04662,ko04720,ko04724,ko04921,ko04922,ko04924,ko05010,ko05014,ko05031,ko05152,ko05166,ko05167,map04010,map04020,map04022,map04114,map04218,map04310,map04360,map04370,map04380,map04650,map04658,map04659,map04660,map04662,map04720,map04724,map04921,map04922,map04924,map05010,map05014,map05031,map05152,map05166,map05167 |
| Hectar predicted targeting category | other localisation |
| Exons | 6 |
| Evalue | 0.00026 |
| EggNOG OGs | COG5126@1|root,KOG0034@2759|Eukaryota,37HX8@33090|Viridiplantae,3GB3C@35493|Streptophyta,44P9V@71274|asterids |
| Description | calcineurin B-like protein |
| Cds size | 900 |
| COG category | T |
| BRITE | ko00000,ko00001,ko01009 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
| 1680789984.6369426-UTR-P-littoralis_Contig200:345304..345845 | 1680789984.6369426-UTR-P-littoralis_Contig200:345304..345845 | Pylaiella littoralis U1_48 | UTR | P-littoralis_Contig200 345305..345845 - |
| 1680789984.7034419-UTR-P-littoralis_Contig200:349113..349134 | 1680789984.7034419-UTR-P-littoralis_Contig200:349113..349134 | Pylaiella littoralis U1_48 | UTR | P-littoralis_Contig200 349114..349134 - |
| 1680789984.7150698-UTR-P-littoralis_Contig200:350453..350579 | 1680789984.7150698-UTR-P-littoralis_Contig200:350453..350579 | Pylaiella littoralis U1_48 | UTR | P-littoralis_Contig200 350454..350579 - |
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
| 1680789984.6477191-CDS-P-littoralis_Contig200:345845..345917 | 1680789984.6477191-CDS-P-littoralis_Contig200:345845..345917 | Pylaiella littoralis U1_48 | CDS | P-littoralis_Contig200 345846..345917 - |
| 1680789984.6559055-CDS-P-littoralis_Contig200:346352..346409 | 1680789984.6559055-CDS-P-littoralis_Contig200:346352..346409 | Pylaiella littoralis U1_48 | CDS | P-littoralis_Contig200 346353..346409 - |
| 1680789984.6677039-CDS-P-littoralis_Contig200:346961..347308 | 1680789984.6677039-CDS-P-littoralis_Contig200:346961..347308 | Pylaiella littoralis U1_48 | CDS | P-littoralis_Contig200 346962..347308 - |
| 1680789984.6785815-CDS-P-littoralis_Contig200:347810..347868 | 1680789984.6785815-CDS-P-littoralis_Contig200:347810..347868 | Pylaiella littoralis U1_48 | CDS | P-littoralis_Contig200 347811..347868 - |
| 1680789984.6881795-CDS-P-littoralis_Contig200:348747..349113 | 1680789984.6881795-CDS-P-littoralis_Contig200:348747..349113 | Pylaiella littoralis U1_48 | CDS | P-littoralis_Contig200 348748..349113 - |
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig200.111.2 >prot_P-littoralis_Contig200.111.2 ID=prot_P-littoralis_Contig200.111.2|Name=mRNA_P-littoralis_Contig200.111.2|organism=Pylaiella littoralis U1_48|type=polypeptide|length=300bp
MGNTLASQKDGRSADAPRAAKDLNDLLPALRERFEELAGLPAEAAAAAAA VPIPVESSTAPEVSAQRLQDPTTAPGAGGGEQENRYVLFDDWSELPGPRG AHVARRLYAVLDANGDGRLDFEEFASAACLLKGSPDESKLALLFKMYGDA SKGGFVGREGLKAFILDVIAASPPLLAPPDLVVVADGDEGGGGSDGVSET PRPSASKTVLPHEKRTEGRAGVVAAADAACAAVLPQPDLEKELGGVLAGM ARVVLAEYDADNDGWLKEKEWRAYLKQEEGSVGVFLKTLSDSVGKLLLP* back to topmRNA from alignment at P-littoralis_Contig200:345305..350579- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_P-littoralis_Contig200.111.2 ID=mRNA_P-littoralis_Contig200.111.2|Name=mRNA_P-littoralis_Contig200.111.2|organism=Pylaiella littoralis U1_48|type=mRNA|length=5275bp|location=Sequence derived from alignment at P-littoralis_Contig200:345305..350579- (Pylaiella littoralis U1_48) GAGCAGCCCATCCCGGAGCTTGACCTAACACACATCATATCCTGCATCTT
CAGTGCGCACACCCATCTATCTCCGCAGCAACGGACAGCAGCTTCACGAT
CCTTGTCACTAAACTTACGGCGCCAAGTGGGTGTATGATACGAAGTATGT
GTTTGGTGTCTAACTCTCCATCCTCGAACTGCGGCAGGATAAGTCGCGTA
AGATATTATCCATTTGACCGATTTCGAACGCATATATTTATATAGCGCGG
TCCTCCACACATGAAATAGTAGTTCCGACCACCCATACCCCAAAGTGAAT
GACGCCAGAATTGATTGGAACGATACCGTCGAGATTCAATTCGTGGTCTT
TCCGAAAACGCACTATTTGATGTTTGATACTCTCTTGTCGTTCGGTCTGT
GTCTGTAGTCGACCCTTGAAAATCATTCTGAGGGCCGTGGTATACACCGT
CAAATACCGCATGGTGTTGTTTGTCTACTGCTGGCAGCATAGAGCCAATA
CTGCTGTAGTTCACTACCATTCAGTATTAAGCACACCCAACGCGTGTTCG
GGGACGCCGCAATCATATATATAGAAACTTCTCCTGGATAAATAAATAGG
CACTTCTACGTAGTACTGCTGCTGTGCTGTAGAAATCGCTTTGAAAACAC
CGAGTATGATCTAGACACCGTGCAAGCTGCTGTAGACACTGAAGGATGAC
AGGGCACATCGTCCTCGGTGTCTTCTTGCTTCTCTACAGCAGAAGAACCC
CTTCGATCGCTTCCACGAAAATGTAGCACATGCAGGGTCAGGCTTGGGCT
TGGCGACAACGTTTTGGCCGTGTGGAGCCAAGCCAATTTGAGCAGTGTCG
TACGTAGGTGTTATTCGGTTGAAGGGCCGCGCACGGTGTGATCTACAGTA
CCACTAGGTTGTGCCATCAATAAAATACCCGCAACAAGAGGAGCACCTGT
GGAAAGCAACGACGTACAGTATGTGTTGCATGTACGGTATGACCCGGTAG
ACTTTCGTGTACAGCAGTATCTAGCACAAAGCAATGGTGGGCCCCGTAAT
GTCTACAAATGCCAGAAATAAAACAGGAAGAAGTGGAGCTATGACACGCA
TACCCGTACCTCGTGGGAGACTGCTGATGTCCATGTGCATCAGGAAAATC
GGTCACCTCAGAGCGCTGATGATGGAGGATCGGTAGCTGTTATTGCTGCC
GTCGCGTGTGTGCCGTTGTTGGCGGCGTGCCGTAGTGCTGTCGCATCTTC
CACGCGCTCTTGATGGTTGAAAAAATCTGAACAACGTGGTACGGGTCATC
GTTCGGCTTACCGATCCATCGTTTCCGCCTCCGTGTCCACATCCCACACG
TTTGAGTGGCTACCTCTTCCCCCCTTCATTACTCCTCCCGCCTCTCGCTC
CTTGATTCCTCCCCAACTCTCGGCGACGACGATGGCTTGACACAGCGTAT
CTTACTTCAGATCCTCATGGGCAACACCTTGGCGTCCCAAAAGGACGGAA
GATCCGCGGACGCACCACGGGCAGCGAAGGACCTCAACGACCTTCTTCCC
GCCTTGCGCGAGCGATTCGAGGAGCTCGCGGGGCTCCCAGCAGAGGCAGC
AGCAGCAGCAGCAGCAGTACCAATACCAGTTGAATCATCAACAGCGCCCG
AGGTCAGCGCTCAGCGCCTGCAGGACCCCACGACAGCACCAGGAGCTGGG
GGGGGAGAGCAAGAGAATCGGTACGTCCTGTTCGACGACTGGTCGGAGCT
GCCGGGGCCGAGGGGTGCGCACGTAGCGAGGAGGCTGTACGCCGTTCTGG
ACGCCAATGGAGACGGCAGATTGGACTTCGAGGTATATACAGCAGCGTTT
TTCGATCTATTGGGTGCAACGGTGCGATGTGATGGGCACTGAGGTGAAAT
CCGTTCGAAGGGAGAGGGGAAAGGCAGAGAAATGAAAAAAGGTACACAGG
GAGAAGTACCGGCAGTCAGGCAAGGGGGGCGAGAGCCAGACGAGAGCGAG
GTAGCGAGAAATGATCGGCGAGATTCACTGACACGGCATGAAAGTTGACG
GAGCGGTGGCCGATACACGCGAATCATGTTTCGATTGCCAGCTCCAAACT
GCCTACGCCGTTTTCACGGTGCATCTACATACATATCCGGCGACGCATGC
ACAAGTACAGATGTCCTCCTCCCCGCGGCGGTGATGACTTTTACAATCGG
TGGAAACCTTCAACCATCATGTCGTCACGCCTAGAAACAAAAATACATAG
CCGGTCGGTGTCCACGGCAATCCTCCTGTCCTGTCGTGTGGAATGGAGGG
AAAGTGTGGCAGTTGTACGACACCAGCGCTACTGCTGCTATTGCAACATA
AGAGAGAGAGAGAGAGAGAGAGAGTGGGGCAGGGTGCAGCACAGCAGCAG
CTTGGAGCAGAACATGCGCGTACCCACATCAAATGTCGTCCATCAAGCTT
GCCTGAACAGCACGCTCCACCCCGCGCCACCCTGCTTATTTGATCTGCTT
CATCGAGCTTCTCCACCCGCTCCTCTCTCTCTCTCTCTCTCTCTCTCCCT
CTTTCTCTCTCTCTCTCTCTCCTTCGCGCTCTCTCTCTCGCCCCCCCATT
CACCTTTCTCTCACTCGCTCTGCGCACGAACTGAACACTTTGTACTTCAC
TGCGGCACTGTTAGTTACGTGTTTTTGCGGACGATGTATTGTGATGCGCC
ACTCCCACCAGGAATTTGCCAGCGCGGCATGTCTCCTCAAGGGCTCTCCC
GACGAAAGCAAGCTCGCACGTGAGCAGCCGTGTGACTCTGGTCTAATTTC
TGGGTGATTTAAGAAGAGGGGGAGAATTGCTTTGATTCGAACCTTTTTCG
GTATGGTGGGTGGGCCGCCGCCTGAGGAGGTCGACCATTTTATTGGTTCG
TGTGACCTTTATGGCGAGCAACGTGCACACGAATGACGCGAAGGACGAGA
CAGGTGTTGAGCTCTTGAGTTCTATGTTCGAAGTCCAGAGTCGGAGAAGA
GAGGGTGCATTTTGGCTCTACAGTGAGTGCTTTTATTCAAAACACCCGCG
GAAAAGGCACGTAACCCGAACCTGGAACAACTAAGCTGCCCCGTCTCAAG
TGAGATGCGCGGTCAACGGTCTATTCGCAGCGACAGCAGGAAGCAAGTAC
GCCCTCCCACACCCTCCCTCCCTCCCGCCTCCCATGGTTTACTTCGATTC
GCTCCGTTTTATTTGATTGATGGCGATTGGCTGGCGACGCGACGGCTGTC
AAATGTTTTTGGTGGTGCAAGTGTTGTTCAAGATGTACGGAGACGCTAGT
AAAGGTGGGTTTGTCGGGAGGGAAGGGCTGAAGGCCTTCATCCTCGACGT
CATCGCCGCGTCTCCTCCGTTACTCGCACCTCCGGATCTCGTTGTTGTTG
CCGATGGCGATGAAGGCGGCGGTGGTAGTGACGGCGTTAGCGAAACCCCT
CGCCCTTCGGCGAGTAAAACGGTGTTACCACACGAGAAGCGAACGGAGGG
CCGTGCCGGTGTCGTTGCCGCTGCGGATGCTGCGTGTGCTGCCGTGCTGC
CGCAGCCAGACCTGGAAAAGGAGCTGGGGGGCGTCCTCGCCGGGATGGCT
CGAGTGGTGTTGGCCGAGGTACACGCGAAAGGGTTTTCGGTGACAACCGA
CCCCTGTTTTCCGTTTCGACGTATCTCGTGGTAACTCCATCCCGTCTTTC
GAGCGACCGCTTGGTTTTCTGGTTCTCGGCTCGTTTTGGTTTGTGTGGTA
GGGCTGTCGAGATGTCGTTCGGCTGATCGCTGCATGGTCCGGTCTGTTGG
TTTGTCGTTTCGTTTACCAGTCGAGCCGTTGGCCCGCCCGCCGAAAGGTC
GGTCGGTCGAGTGATGTGTCCCCTGGCAAAAATCGATCGATCCGCTAGTC
ATGTTCAGAAATTGAATACAGGCAACCAATACGAAGCACAACTTAGCTTC
GTGTTTTTTCTGAAGTTCCCACTAATGCGGACACCTCTTGTTGTATCATC
CCTCGCCGACTGAGCCGGACACCCGATTTCATGGTTTTCATATCATGGTT
CTGCTAGTTCTGCTGCTGCGTTGGCGCTGATGTCTGACCATGAAAGAGGC
ATGATCCTGCTGGGCAGGCACGGATTATTATTGTTTTTACTGCGGGTGCC
GTTTCTCCTCTTACTCGCAGTACGACGCTGACAACGACGGTTGGCTGAAG
GAGAAGGAATGGAGAGCTTACCTGAAGGTGAGATTAATCTGATGGCTGCA
AAAATCGGTAGTACAGGACGCGGGGCGGTGGTGGGTGGCAAGAAGAGAAA
TCGAAACGGTATTTCTCTATGTTTATCATCTCACCCTGTTTGTTCCATTG
CCCCCTCCCTTCCCCTTCCCTCGCCCCCCCCCCTCTTTAACGTTTATGTA
GCGTCGTCCTCTGTTCGTTGGCCTCTTGCTGTTTGGGTCTGGTTCAACAG
CTCTAGAGGCGAAATAAACCTTCTTCAATAGTTGTTCCTGATATTTTGTG
AACACTGTGCAGAACGAGGGAACGACAACAGGAAGGTGTGTGTGCGTGTT
CACATGGCATCCTGAGAAACGGAATATGCGTCTTGCCACCTCCCCTTACC
CCCCCCCCCCCCACCCCCTCCACCACGTATTTTTTCCTGCTTTTTCGCCT
CCGCCCCTACAGCAAGAGGAAGGATCAGTGGGCGTTTTCCTCAAGACCCT
CAGCGACAGCGTCGGGAAGTTGCTCCTGCCGTAGAGAGAGAGAGTAAAAG
GGTTTCCAATTCCCTGCTAAATCTAGGACGCGTCGATCGAACAATCACAC
AACACAGGTATTTTTTTATCGTTCGTTGTGAATGATCTTGCATCGTGACA
GAGAGAGGTTTGACTGGTGGTAAATACTCCTCCTCAGGGCGTGAACCCGA
CAACGAATGCACCTCCGGCACAACACTGATATTCGTCGTGTGTTTGCGAG
GGCTCCTTAGGTTTGTGAAATGTTTTTTTTTTGTGTTCATAAAAATACGA
AGCATTTTCTTTCGTGTATACATGAACTACTTCGTATGTCTTTTTCCTTT
TGCTACTGCAGCAAATGACCGCAGGCGGCACAGCAGCAGCTCTACGTTTT
TGCCATCCTACCAATCCAATGGGGATGCACCACCCGGTGGACGAACAATA
CTCCTTGCGGGGTGCAAAACCGCACGATGTCACCGATGTAACTGTGTCAA
AGTATGCCAGTGCTACTCGTCGTTTATTTTCCACGGCGACCTCCAGAAAA
CCTTTCGTGCAGCTATGATAGGCTG back to topCoding sequence (CDS) from alignment at P-littoralis_Contig200:345305..350579- >mRNA_P-littoralis_Contig200.111.2 ID=mRNA_P-littoralis_Contig200.111.2|Name=mRNA_P-littoralis_Contig200.111.2|organism=Pylaiella littoralis U1_48|type=CDS|length=900bp|location=Sequence derived from alignment at P-littoralis_Contig200:345305..350579- (Pylaiella littoralis U1_48) ATGGGCAACACCTTGGCGTCCCAAAAGGACGGAAGATCCGCGGACGCACC ACGGGCAGCGAAGGACCTCAACGACCTTCTTCCCGCCTTGCGCGAGCGAT TCGAGGAGCTCGCGGGGCTCCCAGCAGAGGCAGCAGCAGCAGCAGCAGCA GTACCAATACCAGTTGAATCATCAACAGCGCCCGAGGTCAGCGCTCAGCG CCTGCAGGACCCCACGACAGCACCAGGAGCTGGGGGGGGAGAGCAAGAGA ATCGGTACGTCCTGTTCGACGACTGGTCGGAGCTGCCGGGGCCGAGGGGT GCGCACGTAGCGAGGAGGCTGTACGCCGTTCTGGACGCCAATGGAGACGG CAGATTGGACTTCGAGGAATTTGCCAGCGCGGCATGTCTCCTCAAGGGCT CTCCCGACGAAAGCAAGCTCGCACTGTTGTTCAAGATGTACGGAGACGCT AGTAAAGGTGGGTTTGTCGGGAGGGAAGGGCTGAAGGCCTTCATCCTCGA CGTCATCGCCGCGTCTCCTCCGTTACTCGCACCTCCGGATCTCGTTGTTG TTGCCGATGGCGATGAAGGCGGCGGTGGTAGTGACGGCGTTAGCGAAACC CCTCGCCCTTCGGCGAGTAAAACGGTGTTACCACACGAGAAGCGAACGGA GGGCCGTGCCGGTGTCGTTGCCGCTGCGGATGCTGCGTGTGCTGCCGTGC TGCCGCAGCCAGACCTGGAAAAGGAGCTGGGGGGCGTCCTCGCCGGGATG GCTCGAGTGGTGTTGGCCGAGTACGACGCTGACAACGACGGTTGGCTGAA GGAGAAGGAATGGAGAGCTTACCTGAAGCAAGAGGAAGGATCAGTGGGCG TTTTCCTCAAGACCCTCAGCGACAGCGTCGGGAAGTTGCTCCTGCCGTAG back to top
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