mRNA_P-littoralis_Contig200.70.2 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig200.70.2 vs. uniprot
Match: A0A7S3HJ49_9STRA (Hypothetical protein n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3HJ49_9STRA) HSP 1 Score: 244 bits (622), Expect = 4.460e-79 Identity = 111/145 (76.55%), Postives = 131/145 (90.34%), Query Frame = 3
Query: 303 PAMADQFYCRYYVGHKGKFGHEFMEFEFSSTGKLRYANNSNYKNDTMIRKEVTVSQAVLDEVRRIIQEADIIAEDDHNWPEPDRVGRQELEVKLGKEHISFTCSKIGSLLDVQESNDPEGLRIFYYLIQDLKCLVFSLITLHFKV 737
P M+D FYCRYYVGHKGKFGHEF+EFE +S G+LRYANNSNYKNDTMIRKEV +S V++E++RII E++I EDD NWPEPD++GRQELE+K+ KEHISFT SKIGSLL+VQES+DPEG RIFYYL+QDLKCLVFSLI+LHFK+
Sbjct: 3 PKMSDDFYCRYYVGHKGKFGHEFLEFEITSDGRLRYANNSNYKNDTMIRKEVKLSPLVIEEIKRIISESEITKEDDRNWPEPDKIGRQELEIKINKEHISFTASKIGSLLNVQESSDPEGFRIFYYLVQDLKCLVFSLISLHFKI 147
BLAST of mRNA_P-littoralis_Contig200.70.2 vs. uniprot
Match: A0A7S2BC10_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2BC10_9STRA) HSP 1 Score: 243 bits (620), Expect = 1.030e-78 Identity = 112/140 (80.00%), Postives = 128/140 (91.43%), Query Frame = 3
Query: 318 QFYCRYYVGHKGKFGHEFMEFEFSSTGKLRYANNSNYKNDTMIRKEVTVSQAVLDEVRRIIQEADIIAEDDHNWPEPDRVGRQELEVKLGKEHISFTCSKIGSLLDVQESNDPEGLRIFYYLIQDLKCLVFSLITLHFKV 737
+FYCRYY GHKGKFGHEFMEFEF G LRYAN+SNYKN MIRKEVTVS AVLDE++RII+E++I EDD+NWPEPDRVGRQELE+K+G EHISFTCSKIGSLLDVQ+S+DP+GLRIFYYL+QDLKC VFSLI+LHFK+
Sbjct: 12 EFYCRYYTGHKGKFGHEFMEFEFQPNGNLRYANDSNYKNAVMIRKEVTVSSAVLDELKRIIEESEITKEDDNNWPEPDRVGRQELEIKIGSEHISFTCSKIGSLLDVQDSSDPDGLRIFYYLVQDLKCFVFSLISLHFKI 151
BLAST of mRNA_P-littoralis_Contig200.70.2 vs. uniprot
Match: D7FPG1_ECTSI (Mago nashi n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FPG1_ECTSI) HSP 1 Score: 241 bits (614), Expect = 3.510e-78 Identity = 120/121 (99.17%), Postives = 121/121 (100.00%), Query Frame = 3
Query: 372 MEFEFSSTGKLRYANNSNYKNDTMIRKEVTVSQAVLDEVRRIIQEADIIAEDDHNWPEPDRVGRQELEVKLGKEHISFTCSKIGSLLDVQESNDPEGLRIFYYLIQDLKCLVFSLITLHFK 734
MEFEFSSTGKLRYANNSNYKNDTMIRKEVTVSQ+VLDEVRRIIQEADIIAEDDHNWPEPDRVGRQELEVKLGKEHISFTCSKIGSLLDVQESNDPEGLRIFYYLIQDLKCLVFSLITLHFK
Sbjct: 1 MEFEFSSTGKLRYANNSNYKNDTMIRKEVTVSQSVLDEVRRIIQEADIIAEDDHNWPEPDRVGRQELEVKLGKEHISFTCSKIGSLLDVQESNDPEGLRIFYYLIQDLKCLVFSLITLHFK 121
BLAST of mRNA_P-littoralis_Contig200.70.2 vs. uniprot
Match: A0A7S2Y0B6_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2Y0B6_9STRA) HSP 1 Score: 242 bits (618), Expect = 4.320e-78 Identity = 113/141 (80.14%), Postives = 129/141 (91.49%), Query Frame = 3
Query: 315 DQFYCRYYVGHKGKFGHEFMEFEFSSTGKLRYANNSNYKNDTMIRKEVTVSQAVLDEVRRIIQEADIIAEDDHNWPEPDRVGRQELEVKLGKEHISFTCSKIGSLLDVQESNDPEGLRIFYYLIQDLKCLVFSLITLHFKV 737
++FYCRYYVGHKGK+GHEFMEFEF+ G LRYANNSNYKND MIRKEV S AV++E++RIIQE++I EDD+ WPEPDRVGRQELEVK+G EHISFTC+KIGSLLDVQES+DPEGLRIFYYL+QDLKCLVFSLI LHFK+
Sbjct: 33 EEFYCRYYVGHKGKYGHEFMEFEFNPDGLLRYANNSNYKNDIMIRKEVNCSPAVIEELKRIIQESEITREDDNQWPEPDRVGRQELEVKIGNEHISFTCAKIGSLLDVQESSDPEGLRIFYYLVQDLKCLVFSLIGLHFKI 173
BLAST of mRNA_P-littoralis_Contig200.70.2 vs. uniprot
Match: A0A061R5Q6_9CHLO (Protein mago nashi n=1 Tax=Tetraselmis sp. GSL018 TaxID=582737 RepID=A0A061R5Q6_9CHLO) HSP 1 Score: 240 bits (612), Expect = 1.330e-77 Identity = 111/143 (77.62%), Postives = 131/143 (91.61%), Query Frame = 3
Query: 309 MADQFYCRYYVGHKGKFGHEFMEFEFSSTGKLRYANNSNYKNDTMIRKEVTVSQAVLDEVRRIIQEADIIAEDDHNWPEPDRVGRQELEVKLGKEHISFTCSKIGSLLDVQESNDPEGLRIFYYLIQDLKCLVFSLITLHFKV 737
MAD+FY RYYVGHKGKFGHEF+EFEF GKLRYANNSNYKNDTMIRKEV VSQAV+DEV+RII++++I+ EDD +WPEPDR+GRQELEV +G +HISF +KIGSLL+VQ+S DPEGLRIFYYL+QDLKCLVFSL++LHFK+
Sbjct: 1 MADEFYVRYYVGHKGKFGHEFLEFEFRPDGKLRYANNSNYKNDTMIRKEVYVSQAVMDEVKRIIEDSEILNEDDDSWPEPDRIGRQELEVVMGNDHISFATTKIGSLLEVQQSKDPEGLRIFYYLVQDLKCLVFSLVSLHFKI 143
BLAST of mRNA_P-littoralis_Contig200.70.2 vs. uniprot
Match: H3HCT8_PHYRM (Uncharacterized protein n=16 Tax=Peronosporaceae TaxID=4777 RepID=H3HCT8_PHYRM) HSP 1 Score: 239 bits (610), Expect = 2.770e-77 Identity = 111/144 (77.08%), Postives = 128/144 (88.89%), Query Frame = 3
Query: 306 AMADQFYCRYYVGHKGKFGHEFMEFEFSSTGKLRYANNSNYKNDTMIRKEVTVSQAVLDEVRRIIQEADIIAEDDHNWPEPDRVGRQELEVKLGKEHISFTCSKIGSLLDVQESNDPEGLRIFYYLIQDLKCLVFSLITLHFKV 737
A D FY RYYVGH+GKFGHEFMEFEF + GKLRYANNSNYK D+MIRKEVTVSQ+V+DEV+RII +++I EDD WPEPDRVGRQELE+ LG +HISFTC+KIGSLLDVQ+S DPEGLR+ YYL+QDLKCLVFS+ITLHFK+
Sbjct: 2 ARDDDFYVRYYVGHRGKFGHEFMEFEFRADGKLRYANNSNYKKDSMIRKEVTVSQSVIDEVKRIISDSEITKEDDKEWPEPDRVGRQELEIVLGNDHISFTCAKIGSLLDVQDSKDPEGLRVLYYLVQDLKCLVFSMITLHFKI 145
BLAST of mRNA_P-littoralis_Contig200.70.2 vs. uniprot
Match: A0A8J2SV48_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2SV48_9STRA) HSP 1 Score: 238 bits (607), Expect = 7.660e-77 Identity = 114/140 (81.43%), Postives = 125/140 (89.29%), Query Frame = 3
Query: 318 QFYCRYYVGHKGKFGHEFMEFEFSSTGKLRYANNSNYKNDTMIRKEVTVSQAVLDEVRRIIQEADIIAEDDHNWPEPDRVGRQELEVKLGKEHISFTCSKIGSLLDVQESNDPEGLRIFYYLIQDLKCLVFSLITLHFKV 737
+FY RYYVGH+GKFGHEFMEFEF+STGKLRYANNSNYKND+MIRKEVTVS AVLDE+ RII +A+I EDD WPEPDRVGRQELEV EHISFTC+KIGSLLDVQES DPEGLR FYYL+QDLKC VFSLI+LHFK+
Sbjct: 5 EFYLRYYVGHRGKFGHEFMEFEFASTGKLRYANNSNYKNDSMIRKEVTVSDAVLDEIERIITDAEITKEDDSEWPEPDRVGRQELEVISNGEHISFTCAKIGSLLDVQESKDPEGLRCFYYLVQDLKCAVFSLISLHFKI 144
BLAST of mRNA_P-littoralis_Contig200.70.2 vs. uniprot
Match: K3WUL2_GLOUD (Uncharacterized protein n=4 Tax=Pythiaceae TaxID=4782 RepID=K3WUL2_GLOUD) HSP 1 Score: 235 bits (600), Expect = 9.160e-76 Identity = 110/141 (78.01%), Postives = 125/141 (88.65%), Query Frame = 3
Query: 315 DQFYCRYYVGHKGKFGHEFMEFEFSSTGKLRYANNSNYKNDTMIRKEVTVSQAVLDEVRRIIQEADIIAEDDHNWPEPDRVGRQELEVKLGKEHISFTCSKIGSLLDVQESNDPEGLRIFYYLIQDLKCLVFSLITLHFKV 737
D FY RYYVGHKGKFGHEFMEFEF GKLRYANNSNYK D+MIRKEVTVSQAV++E++RII++++I EDD WPEPDRVGRQELE+ L EHISFTC+KIGSLLDVQ+S DPEGLR+ YYL+QDLKC VFSLITLHFK+
Sbjct: 5 DDFYLRYYVGHKGKFGHEFMEFEFRGDGKLRYANNSNYKKDSMIRKEVTVSQAVIEELKRIIKDSEITKEDDREWPEPDRVGRQELEIILDDEHISFTCAKIGSLLDVQDSKDPEGLRVLYYLVQDLKCFVFSLITLHFKI 145
BLAST of mRNA_P-littoralis_Contig200.70.2 vs. uniprot
Match: F0W2T8_9STRA (Protein mago nashi putative n=2 Tax=Albugo TaxID=65356 RepID=F0W2T8_9STRA) HSP 1 Score: 235 bits (600), Expect = 9.160e-76 Identity = 110/142 (77.46%), Postives = 127/142 (89.44%), Query Frame = 3
Query: 312 ADQFYCRYYVGHKGKFGHEFMEFEFSSTGKLRYANNSNYKNDTMIRKEVTVSQAVLDEVRRIIQEADIIAEDDHNWPEPDRVGRQELEVKLGKEHISFTCSKIGSLLDVQESNDPEGLRIFYYLIQDLKCLVFSLITLHFKV 737
++ FY RYYVGH+GKFGHEFMEFEF S GKLRYANNSNYK D+MIRKEVTVS+AVL+EV+RIIQ+++I EDD +WPEPDRVGRQELEV EHISF CSKIGSLLDVQ+S DP+G+R+ YYL+QDLKCLVFSLITLHFK+
Sbjct: 4 SEDFYVRYYVGHRGKFGHEFMEFEFKSDGKLRYANNSNYKRDSMIRKEVTVSKAVLEEVKRIIQDSEITKEDDRHWPEPDRVGRQELEVVFDDEHISFNCSKIGSLLDVQDSKDPDGMRVLYYLVQDLKCLVFSLITLHFKI 145
BLAST of mRNA_P-littoralis_Contig200.70.2 vs. uniprot
Match: B6SJN3_MAIZE (Protein mago nashi n=4 Tax=Poaceae TaxID=4479 RepID=B6SJN3_MAIZE) HSP 1 Score: 235 bits (600), Expect = 1.560e-75 Identity = 112/140 (80.00%), Postives = 123/140 (87.86%), Query Frame = 3
Query: 318 QFYCRYYVGHKGKFGHEFMEFEFSSTGKLRYANNSNYKNDTMIRKEVTVSQAVLDEVRRIIQEADIIAEDDHNWPEPDRVGRQELEVKLGKEHISFTCSKIGSLLDVQESNDPEGLRIFYYLIQDLKCLVFSLITLHFKV 737
+FY RYYVGHKGKFGHEF+EFEF GKLRYANNSNYKNDTMIRKEV VS +VL E RRIIQE+DI+ EDD NWPEPDR+GRQELE+ +G EHISFT SKIGSL+DVQ S DPEGLRIFYYL+QDLKC VFSLI LHFK+
Sbjct: 21 EFYLRYYVGHKGKFGHEFLEFEFRPDGKLRYANNSNYKNDTMIRKEVFVSPSVLREARRIIQESDIMKEDDSNWPEPDRIGRQELEIVMGNEHISFTTSKIGSLVDVQSSKDPEGLRIFYYLVQDLKCFVFSLINLHFKI 160 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig200.70.2 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig200.70.2 >prot_P-littoralis_Contig200.70.2 ID=prot_P-littoralis_Contig200.70.2|Name=mRNA_P-littoralis_Contig200.70.2|organism=Pylaiella littoralis U1_48|type=polypeptide|length=153bp MADQFYCRYYVGHKGKFGHEFMEFEFSSTGKLRYANNSNYKNDTMIRKEVback to top mRNA from alignment at P-littoralis_Contig200:244204..249417- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig200.70.2 ID=mRNA_P-littoralis_Contig200.70.2|Name=mRNA_P-littoralis_Contig200.70.2|organism=Pylaiella littoralis U1_48|type=mRNA|length=5214bp|location=Sequence derived from alignment at P-littoralis_Contig200:244204..249417- (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig200:244204..249417- >mRNA_P-littoralis_Contig200.70.2 ID=mRNA_P-littoralis_Contig200.70.2|Name=mRNA_P-littoralis_Contig200.70.2|organism=Pylaiella littoralis U1_48|type=CDS|length=459bp|location=Sequence derived from alignment at P-littoralis_Contig200:244204..249417- (Pylaiella littoralis U1_48)back to top |