prot_P-littoralis_Contig200.57.1 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_P-littoralis_Contig200.57.1
Unique Name	prot_P-littoralis_Contig200.57.1
Type	polypeptide
Organism	Pylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length	549

Homology

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BLAST of mRNA_P-littoralis_Contig200.57.1 vs. uniprot
Match: A0A6H5KTR9_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KTR9_9PHAE)

HSP 1 Score: 144 bits (364), Expect = 9.460e-34
Identity = 212/418 (50.72%), Postives = 233/418 (55.74%), Query Frame = 0

Query:    1 MSNRQKKPDARALFKQAKSRSGQSPAQK-----GGAASKSSSAELGGKYRGK--SKDELLALLKAKQAIAAASKANAAATAQKQKQGAKVG-RSSGSPAVAPTTVAARVATNQRSGERKPTVKVPVLATTSGAGRPNVEPAARGSAAAEIGGGLTGLLGIGASDSXXXXXXXXXXXXXXXXXXXXNIDGKRVPGAGTAAPAAAAVPEGLPADFFDNADDAEETSEAAAVESLEQKKKERVGKGAAAPAVEFGAERAAVLAAEAAVIAEADARREAERLAAIRAAGLAVPASDGAAAGGDGATGMMVNGGARAGAAPAPVANEDAAEAAPNGSALPEGFFDDPEIDAKSRGVDLKAKKKEDEQNEWKKFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEQATMMGRLAMLMNKSESL 410
            MSN QKKPDARALFKQAKSR G++  +      G A S  S A           SK+ELLAL +AK+                     +   +SSGSPA                  RKPTVKVPV+   SGAGRP+V+PA RG   AE G GLTGLLGIGA DS XXXXXXXXXXXXXXXXXX +      P +          PEGLPA FFD                          +  A P   FGAERAA LAAE          REAE+LAA+RAAGL V A+DGA             G A                 APNGSALPEGFFDDPE+DAKSRGVDLKA+KK          XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEQATMMGRLA+LMNKSES+
Sbjct:    1 MSNHQKKPDARALFKQAKSRKGENSGKNVVSAGGSAVSGRSGAXXXXXXXXXXXSKEELLALYRAKKXXXXXXXXXXXXXXXXXXXTQRPSDKSSGSPATG----------------RKPTVKVPVMTAASGAGRPSVQPAPRGQVQAE-GVGLTGLLGIGAGDSSXXXXXXXXXXXXXXXXXXRHPGTDAAPVSXXXXXXXXXXPEGLPAGFFDEDLAXXXXXXXXXXXXXXXXXXXXXXRPQAPPVGRFGAERAAELAAEXXXXXXXXXLREAEKLAAMRAAGLLVVAADGA-----------TGGAAADXXXXXXXXXXXXXXXAPNGSALPEGFFDDPEMDAKSRGVDLKAEKKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEQATMMGRLALLMNKSESI 390

[Close]

BLAST of mRNA_P-littoralis_Contig200.57.1 vs. uniprot
Match: A0A7S2V2Z8_9STRA (Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V2Z8_9STRA)

HSP 1 Score: 54.3 bits (129), Expect = 4.360e-5
Identity = 31/85 (36.47%), Postives = 42/85 (49.41%), Query Frame = 0

Query:  326 LPEGFFDDPEIDAKSRGVDLKAKKKEDEQNEWKKFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEQATMMGRLAMLMNKSESL 410
            LPE FFDDP  DAK++G+D++AKKKED + EW++F                               E    M RLA L++KSE +
Sbjct:   71 LPENFFDDPVADAKAKGIDVEAKKKEDARKEWEEFQKFAKTVEKAEQEEDLMIEEAAGEREHEQSLEHMAQMTRLADLLHKSEKV 155

The following BLAST results are available for this feature:

BLAST of mRNA_P-littoralis_Contig200.57.1 vs. uniprot

BLAST of mRNA_P-littoralis_Contig200.57.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2


Match Name	E-value	Identity	Description
A0A6H5KTR9_9PHAE	9.460e-34	50.72	Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2...	[more]
A0A7S2V2Z8_9STRA	4.360e-5	36.47	Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 360..394
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 70..110
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 17..34
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..44
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 408..440
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 68..234
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 220..234
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 317..490
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 160..178
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 332..375
IPR040050	Zinc finger protein 830-like	PANTHER	PTHR13278	UNCHARACTERIZED	coord: 192..436

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
P-littoralis_Contig200	contig	P-littoralis_Contig200:197229..206250 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
Pylaiella littoralis U1_48 OGS1.0	2022-07-08

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_P-littoralis_Contig200.57.1	mRNA_P-littoralis_Contig200.57.1	Pylaiella littoralis U1_48	mRNA	P-littoralis_Contig200 197110..206638 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_P-littoralis_Contig200.57.1 ID=prot_P-littoralis_Contig200.57.1|Name=mRNA_P-littoralis_Contig200.57.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=549bp
MSNRQKKPDARALFKQAKSRSGQSPAQKGGAASKSSSAELGGKYRGKSKD
ELLALLKAKQAIAAASKANAAATAQKQKQGAKVGRSSGSPAVAPTTVAAR
VATNQRSGERKPTVKVPVLATTSGAGRPNVEPAARGSAAAEIGGGLTGLL
GIGASDSSSSSGDDDDDDDDDDDDDDDNIDGKRVPGAGTAAPAAAAVPEG
LPADFFDNADDAEETSEAAAVESLEQKKKERVGKGAAAPAVEFGAERAAV
LAAEAAVIAEADARREAERLAAIRAAGLAVPASDGAAAGGDGATGMMVNG
GARAGAAPAPVANEDAAEAAPNGSALPEGFFDDPEIDAKSRGVDLKAKKK
EDEQNEWKKFMSFAEEVKKTEKEEEQEEEDKEENKEQYEELEQATMMGRL
AMLMNKSESLARKRKRPEEPAEGAGNEERERDKPERELENGGARAAAAAA
AAAAAGGQRSQLKQREPSGGGGGSGGGGETESGLEVEVAKTGTAMREVAV
ASAPADAAAAEISAMLRGRKRKKKKATEDAFAGEYVPIDPLDWRARGR*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR040050	ZNF830-like