mRNA_P-littoralis_Contig200.41.1 (mRNA) Pylaiella littoralis U1_48

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-littoralis_Contig200.41.1
Unique NamemRNA_P-littoralis_Contig200.41.1
TypemRNA
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Homology
[Close]
BLAST of mRNA_P-littoralis_Contig200.41.1 vs. uniprot
Match: D7FPG9_ECTSI (BTB (POZ) domain containing 9 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FPG9_ECTSI)

HSP 1 Score: 537 bits (1384), Expect = 1.290e-182
Identity = 315/578 (54.50%), Postives = 378/578 (65.40%), Query Frame = 1 
Query:  196 LVDSDTCDVTFVVVASGSGYHPDLSDTRARSTSMDGDGGEPRRGTPERARRQHESRTEHSTCSYSRSSSSAVSVEGVAGRDIAVEGVSDDRRRSSRQQVPSASTAATTEGIVRVAGRGGEREANRGGGG----GECEKEVDELRPGGPPTTTSSTPRIPA------TTATCGGCNSRREFRCHRLLFASCSEYFRALLYGGMSESETRKVELSDVAPEAFEAIMTYVYTGRVRLAADNVMDIFSLAHRFGMDKLLRACAEVLDQCINCDDVCRVLEVAEYYGHAELATKCWDLIKENTPRVLKTESFLELPWPFLLTLVSDGELQVDEADLFQAVNAWVSKDPADRRHRVDELSGHFRLPLMSLRELMSVVRPSELLAADFILDAVTYHADPDQWSGDSLMVRPRGKRFRWDSSSLAAGAWTADDNRTV----------TTSVGDWVGVYGDRTMRSGFHRWSVRANKVGRSERKSAWGAIIGVAPPRSLNDSRPYLPVTGFIIGTGDRKLGGHTALDDYASVVVADGDVVTVAYDADGGVLSFCVNGASLGEAYTGLPGPMVAALAVNAAGAMWEMV 1869
            +VD DTCDVTFVV +  S   P  S+      +          GTPERAR + E+  E  +      S   VS  G+A  D A    + +R R   Q+  +      T         GGE E++R G      G  +     +   G  ++T  +   PA      T+++ G   + REFRCHR+LFASCS YFRALLYGGMSESETR+VEL DV PE FEAIM YVYTG+V + A NVMDIFSLAHRFGM +LL+ACAEVLD+C+NCDDVCRVLE AEYYGH ELA KCWDLIK+NTPRVLK+ESFLEL    +L+LV +GELQV+EA+LF+AV AWVS+D A+RR  VDELS HFRLPLMSL+ELMSVVRP+ L+AAD ILDAVTYHADP +W+GD L  RPRGKR  WD+SSLAAGAWTADDNRT           T S     G  G  +  S            G S  ++A+    G       + +RPYLPVTGFI GTG  KLGG+TA+D+Y+S  + DGDVVTV YDADGGV++F VNG SLG+AY+GL GP VAA+AVNAAGA WE V
Sbjct:    1 MVDGDTCDVTFVVTSVASA--PSSSEGLIPQPA----------GTPERARPRTET-LEQGSHRGDNCSGKNVSGAGIADSDTAGSCENRERHRGEGQEALAGGAGGXTX--------GGELESDREGADKLTQGTTDVGTAAVTTSGSVSSTKLSSCSPAHDTSGNTSSSLG--TTSREFRCHRVLFASCSAYFRALLYGGMSESETRRVELRDVTPEGFEAIMRYVYTGKVSVDAANVMDIFSLAHRFGMGELLKACAEVLDECMNCDDVCRVLEAAEYYGHDELAAKCWDLIKDNTPRVLKSESFLELRCQQVLSLVREGELQVNEAELFKAVQAWVSRDTAERRRHVDELSRHFRLPLMSLKELMSVVRPTNLIAADAILDAVTYHADPTRWTGDCLTARPRGKRLAWDASSLAAGAWTADDNRTGLGFIGGPSERTRSAEPRSGALGQPSSESPDRIRRALEVVAGHSTLRNAFSCSTGCP-----STARPYLPVTGFIAGTGSSKLGGNTAVDEYSSTSITDGDVVTVMYDADGGVVTFFVNGTSLGQAYSGLSGPNVAAIAVNAAGAQWECV 550
[Close]
BLAST of mRNA_P-littoralis_Contig200.41.1 vs. uniprot
Match: A0A6H5L8F4_9PHAE (BTB domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L8F4_9PHAE)

HSP 1 Score: 421 bits (1082), Expect = 2.820e-138
Identity = 258/492 (52.44%), Postives = 309/492 (62.80%), Query Frame = 1 
Query:  115 EGKGGEKTAAAQSHVDHSDGVLAGLFELVDSDTCDVTFVVVASGSGYHPDLSDTRARSTSMDGDGGEPRRGTPERARRQHESRTEHSTCSYSRSSSSAVSVEGVAGRDIAVEGVSDDRRRSSRQQVPSASTAATTEGIVRVAGRGGEREANRGGGGGECEKEVDELRPGGPPTTTSSTPRIPATT-ATCGGCN------------SRREFRCHRLLFASCSEYFRALLYGGMSESETRKVELSDVAPEAFEAIMTYVYTGRVRLAADNVMDIFSLAHRFGMDKLLRACAEVLDQCINCDDVCRVLEVAEYYGHAELATKCWDLIKENTPRVLKTESFLELPWPFLLTLVSDGELQVDEADLFQAVNAWVSKDPADRRHRVDE----------------------------------LSGHFRLPLMSLRELMSVVRPSELLAADFILDAVTYHADPDQWSGDSLMVRPRGKRFRWDSSSLAAGAWTADDNRT 1449
            EG GG K    +  VDHS   L GLFE+VD DTCDVTFVV +  S             +S +G   +P  GTPERAR + E+  E  +      S   VS  G+A    A    + +R+R   Q+          +G  R A  GGE E  R     E  +++++   G   T  ++   + +T  +TC   +            + REFRCHR+LFASCS YFRALLYGGMSESETR+VEL DV PE FEAIM YVYTG+V + A NVMDIFSLAHRFGM +LL+ACAEVLD+C+NCDDVCRVLE AEYYGH ELA KCWDLIK+NTPRVLK+ESFL+L    +L+LV +GELQVDEA+LF+AV AWVS+D A+RR  VDE                                  LS HFRLPLMSL+ELMSVVRP+ L+AAD ILDAVTYHADP +W+GD LM RPRGKR  WD+SSLAAGAWT DDNRT
Sbjct:    2 EGTGGSK--GCRCDVDHSVARLNGLFEMVDDDTCDVTFVVTSVASAQ-----------SSSEGLLPQPA-GTPERARPRTET-LEQGSHRGDNCSDKNVSGAGIADNYRAGSCENRERQRGEGQEA--------WDGGGRGATGGGELETAR-----EGAEKLNQGTTGVGTTAVATXSSVSSTKLSTCSPAHDTSGSTSSSLGTTSREFRCHRVLFASCSAYFRALLYGGMSESETRRVELRDVTPEGFEAIMRYVYTGKVSVDAANVMDIFSLAHRFGMGELLKACAEVLDECLNCDDVCRVLEAAEYYGHDELAAKCWDLIKDNTPRVLKSESFLDLRSQQVLSLVREGELQVDEAELFKAVQAWVSRDTAERRRHVDEASCVRHAQWFAEVLCSAVLQKCARGRVVPPSQHRLSRHFRLPLMSLKELMSVVRPTNLIAADAILDAVTYHADPTRWTGDCLMARPRGKRLAWDASSLAAGAWTTDDNRT 465
[Close]
BLAST of mRNA_P-littoralis_Contig200.41.1 vs. uniprot
Match: A0A444UQ67_ACIRT (BTB/POZ domain-containing protein 9 n=2 Tax=Acipenser ruthenus TaxID=7906 RepID=A0A444UQ67_ACIRT)

HSP 1 Score: 160 bits (406), Expect = 3.920e-38
Identity = 87/214 (40.65%), Postives = 132/214 (61.68%), Query Frame = 1 
Query:  694 RREFRCHRLLFASCSEYFRALLYGGMSESETR-KVELSDVAPEAFEAIMTYVYTGRVRLAADN---VMDIFSLAHRFGMDKLLRACAEVLDQCINCDDVCRVLEVAEYYGHAELATKCWDLIKENTPRVLKTESFLELPWPFLLTLVSDGELQVDEADLFQAVNAWVSKDPADRRHRVDELSGHFRLPLMSLRELMSVVRPSELLAADFILDAV 1323
            ++ F  HR++ A+  +YFRALLYGGM ES+ + ++ L D   EAF  ++ Y+YTGRV L+++    ++D  SLAHR+G ++L  + +E L   +N  +VC + +VA  Y   +L+T C   I  N P VL +E FL L    LLT+V        E ++FQA+  W   + A++    +E+ G  RLPLMSL E+++VVRPS LL+ D +LDA+
Sbjct:   83 KKRFPAHRVILAARCQYFRALLYGGMKESQPQAEIPLEDTTAEAFSMLLQYIYTGRVSLSSEREEVLLDFLSLAHRYGFEQLEDSTSEYLRTILNTHNVCLIFDVASLYSLRKLSTTCCTYIDRNAPDVLASEGFLSLSKLALLTVVRRDSFAAPEKEIFQALCRWCRHNSAEKP---EEVMGAVRLPLMSLAEMLNVVRPSGLLSPDALLDAI 293
[Close]
BLAST of mRNA_P-littoralis_Contig200.41.1 vs. uniprot
Match: A0A444U0N6_ACIRT (BTB/POZ domain-containing protein 9 n=5 Tax=Acipenseroidei TaxID=186622 RepID=A0A444U0N6_ACIRT)

HSP 1 Score: 157 bits (397), Expect = 3.110e-37
Identity = 84/219 (38.36%), Postives = 131/219 (59.82%), Query Frame = 1 
Query:  694 RREFRCHRLLFASCSEYFRALLYGGMSESETR-KVELSDVAPEAFEAIMTYVYTGRVRLAADN---VMDIFSLAHRFGMDKLLRACAEVLDQCINCDDVCRVLEVAEYYGHAELATKCWDLIKENTPRVLKTESFLELPWPFLLTLVSDGELQVDEADLFQAVNAWVSKDPADRRHRVDELSGHFRLPLMSLRELMSVVRPSELLAADFILDAVTYHAD 1338
            ++ F  HR++ A+   YFRALLYGGM ES+ + ++ L D   EAF  ++ Y+YTGRV ++++    ++D  SLAHR+G ++L  + +E L   +N  +VC + +VA  Y   +L+T C   I  NT  VL +E FL +  P LL +V        E ++FQA+  W   +  +     +E+ G  RLPLMSL E+++VVRPS LL+ D +LDA+   ++
Sbjct:   44 KKRFPTHRVILAARCHYFRALLYGGMKESQPQAEIPLEDTTAEAFSMLLQYIYTGRVSMSSEREEVLLDFLSLAHRYGFEQLEDSTSEYLRTILNTHNVCLIFDVASLYSLRKLSTSCCTYIDRNTADVLASEGFLSMSKPALLIMVRRDSFAAPEKEIFQALCCWCRHNSTELP---EEVMGAVRLPLMSLEEMLNVVRPSGLLSPDALLDAIKIRSE 259
[Close]
BLAST of mRNA_P-littoralis_Contig200.41.1 vs. uniprot
Match: A0A8J1U5F6_OWEFU (BTB/POZ domain-containing protein 9 n=1 Tax=Owenia fusiformis TaxID=6347 RepID=A0A8J1U5F6_OWEFU)

HSP 1 Score: 157 bits (397), Expect = 3.950e-37
Identity = 81/213 (38.03%), Postives = 128/213 (60.09%), Query Frame = 1 
Query:  700 EFRCHRLLFASCSEYFRALLYGGMSESE--TRKVELSDVAPEAFEAIMTYVYTGRVRLA---ADNVMDIFSLAHRFGMDKLLRACAEVLDQCINCDDVCRVLEVAEYYGHAELATKCWDLIKENTPRVLKTESFLELPWPFLLTLVSDGELQVDEADLFQAVNAWVSKDPADRRHRVDELSGHFRLPLMSLRELMSVVRPSELLAADFILDAV 1323
            EF  HR++ AS S+YFRALL+GG+ ES+     +EL D  P+AF  ++ Y+YTGRV LA    +N++D+  L+H++G  +L  + ++ L   +N  +VC + ++A  YG A L   C++ I  N P VL+ E+FL L  P L  ++S       E D+F A+  W  ++P      V  +    RLPLM++ +L++ VRP+E ++ D ILDA+
Sbjct:   46 EFHAHRVILASRSDYFRALLFGGLRESQPGVSTIELKDTTPDAFRHLLKYIYTGRVNLADMKEENLLDVLGLSHQYGFLELESSISDYLKATLNIRNVCFIYDLANMYGLASLCKTCYEFIDRNAPDVLRGEAFLSLSGPALYDIISRDSFCAAEIDIFNAIKVWSERNP---EVDVAPIMSVVRLPLMTIPQLLNTVRPTEFVSPDSILDAI 255
[Close]
BLAST of mRNA_P-littoralis_Contig200.41.1 vs. uniprot
Match: A0A6P7XEI7_9AMPH (BTB/POZ domain-containing protein 9 n=2 Tax=Gymnophiona TaxID=8445 RepID=A0A6P7XEI7_9AMPH)

HSP 1 Score: 155 bits (392), Expect = 1.400e-36
Identity = 88/219 (40.18%), Postives = 128/219 (58.45%), Query Frame = 1 
Query:  694 RREFRCHRLLFASCSEYFRALLYGGMSESETR-KVELSDVAPEAFEAIMTYVYTGRVRLAADN---VMDIFSLAHRFGMDKLLRACAEVLDQCINCDDVCRVLEVAEYYGHAELATKCWDLIKENTPRVLKTESFLELPWPFLLTLVSDGELQVDEADLFQAVNAWVSKDPADRRHRVDELSGHFRLPLMSLRELMSVVRPSELLAADFILDAVTYHAD 1338
            +R F  HR++ A+  +YFRALLYGGM ES+ + ++ L D  PEAF  ++ Y+YTGRV L  +    ++D  SLAH++G  +L  + +E L   +N  +VC + +VA  Y   +L   C   I  N   VL +E FL L    LL +V+       E D+FQA+ +W  K+  +  H   E+    RLPLMSL EL++VVRPS LL+ D ILDA+   ++
Sbjct:   44 KRRFPAHRVILAARCQYFRALLYGGMRESQPKAEIPLEDTTPEAFTMLLKYIYTGRVTLRDEKEEVLLDFLSLAHKYGFPELEDSTSEYLCTILNVQNVCMIYDVASLYSLPKLTCTCCMFIDRNAQEVLSSEGFLTLSKAALLNIVTRDSFAAPEKDIFQALTSWC-KNNGNENHT--EVMQAVRLPLMSLTELLNVVRPSGLLSPDAILDAIKIRSE 259
[Close]
BLAST of mRNA_P-littoralis_Contig200.41.1 vs. uniprot
Match: A0A8C5RET3_LATLA (BTB domain containing 9 n=2 Tax=Sauria TaxID=32561 RepID=A0A8C5RET3_LATLA)

HSP 1 Score: 150 bits (379), Expect = 3.010e-36
Identity = 84/219 (38.36%), Postives = 124/219 (56.62%), Query Frame = 1 
Query:  694 RREFRCHRLLFASCSEYFRALLYGGMSESETR-KVELSDVAPEAFEAIMTYVYTGRVRLAADN---VMDIFSLAHRFGMDKLLRACAEVLDQCINCDDVCRVLEVAEYYGHAELATKCWDLIKENTPRVLKTESFLELPWPFLLTLVSDGELQVDEADLFQAVNAWVSKDPADRRHRVDELSGHFRLPLMSLRELMSVVRPSELLAADFILDAVTYHAD 1338
            ++ F  HR++ A+  +YFRALLYGGM ES+   ++ L D   EAF  ++ Y+YTGR  L  +    ++D  SLAH++G  +L  + +E L   +N  +VC   +VA  Y   +L   C+  +  N   VL +E FL L  P LL++V        E D+FQA+  W   +P +      E+    RLPLMSL EL++VVRPS LL+ D ILDA+   ++
Sbjct:   44 KKRFPAHRVILAARCQYFRALLYGGMRESQPEAEIPLHDTTAEAFTMLLKYIYTGRATLRDEKEEVLLDFLSLAHKYGFPELEDSTSEYLCTILNIQNVCMTYDVANLYSLPKLTCMCFIFMDRNAQEVLSSEGFLSLSKPALLSIVLRDSFAAPEKDIFQALMNWCKHNPKENHA---EIMKAVRLPLMSLTELLNVVRPSGLLSPDAILDAIKVRSE 259
[Close]
BLAST of mRNA_P-littoralis_Contig200.41.1 vs. uniprot
Match: A0A6P8PVN7_GEOSA (BTB/POZ domain-containing protein 9 n=6 Tax=Tetrapoda TaxID=32523 RepID=A0A6P8PVN7_GEOSA)

HSP 1 Score: 154 bits (389), Expect = 3.300e-36
Identity = 86/219 (39.27%), Postives = 125/219 (57.08%), Query Frame = 1 
Query:  694 RREFRCHRLLFASCSEYFRALLYGGMSESETR-KVELSDVAPEAFEAIMTYVYTGRVRLAADN---VMDIFSLAHRFGMDKLLRACAEVLDQCINCDDVCRVLEVAEYYGHAELATKCWDLIKENTPRVLKTESFLELPWPFLLTLVSDGELQVDEADLFQAVNAWVSKDPADRRHRVDELSGHFRLPLMSLRELMSVVRPSELLAADFILDAVTYHAD 1338
            +R F  HR++ A+  +YFRALLYGGM ES+ + ++ L D  PEAF  ++ Y+YTGRV L  +    ++D  SLAH++G  +L  + +E L   +N  +VC + +VA  Y   +L   C   I  N   VL +E FL L    LL +V        E D+FQA+ +W   +  +      E+    RLPLMSL EL++VVRPS LL+ D ILDA+   ++
Sbjct:   44 KRRFPAHRVILAARCQYFRALLYGGMRESQPKAEIPLEDTTPEAFTMLLKYIYTGRVTLRDEKEEVLLDFLSLAHKYGFPELEDSTSEYLCTILNVQNVCMIYDVASLYSLPKLTCTCCMFIDRNAQEVLSSEGFLTLSKAALLNIVMRDSFAAPEKDIFQALTSWCKSNGKENH---TEVMHAIRLPLMSLTELLNVVRPSGLLSPDAILDAIKIRSE 259
[Close]
BLAST of mRNA_P-littoralis_Contig200.41.1 vs. uniprot
Match: V8NQV2_OPHHA (BTB/POZ domain-containing protein 9 (Fragment) n=1 Tax=Ophiophagus hannah TaxID=8665 RepID=V8NQV2_OPHHA)

HSP 1 Score: 150 bits (379), Expect = 6.940e-36
Identity = 84/219 (38.36%), Postives = 124/219 (56.62%), Query Frame = 1 
Query:  694 RREFRCHRLLFASCSEYFRALLYGGMSESETR-KVELSDVAPEAFEAIMTYVYTGRVRLAADN---VMDIFSLAHRFGMDKLLRACAEVLDQCINCDDVCRVLEVAEYYGHAELATKCWDLIKENTPRVLKTESFLELPWPFLLTLVSDGELQVDEADLFQAVNAWVSKDPADRRHRVDELSGHFRLPLMSLRELMSVVRPSELLAADFILDAVTYHAD 1338
            ++ F  HR++ A+  +YFRALLYGGM ES+   ++ L D   EAF  ++ Y+YTGR  L  +    ++D  SLAH++G  +L  + +E L   +N  +VC   +VA  Y   +L   C+  +  N   VL +E FL L  P LL++V        E D+FQA+  W   +P +      E+    RLPLMSL EL++VVRPS LL+ D ILDA+   ++
Sbjct:   96 KKRFPAHRVILAARCQYFRALLYGGMRESQPEAEIPLHDTTAEAFTMLLKYIYTGRATLRDEKEEVLLDFLSLAHKYGFPELEDSTSEYLCTILNIQNVCMTYDVANLYSLPKLTCMCFIFMDRNAQEVLSSEGFLSLSKPALLSIVLRDSFAAPEKDIFQALMNWCKHNPKENHA---EIMKAVRLPLMSLTELLNVVRPSGLLSPDAILDAIKVRSE 311
[Close]
BLAST of mRNA_P-littoralis_Contig200.41.1 vs. uniprot
Match: A0A6P9CKX8_PANGU (BTB/POZ domain-containing protein 9 n=5 Tax=Amniota TaxID=32524 RepID=A0A6P9CKX8_PANGU)

HSP 1 Score: 150 bits (378), Expect = 2.520e-35
Identity = 84/219 (38.36%), Postives = 124/219 (56.62%), Query Frame = 1 
Query:  694 RREFRCHRLLFASCSEYFRALLYGGMSESETR-KVELSDVAPEAFEAIMTYVYTGRVRLAADN---VMDIFSLAHRFGMDKLLRACAEVLDQCINCDDVCRVLEVAEYYGHAELATKCWDLIKENTPRVLKTESFLELPWPFLLTLVSDGELQVDEADLFQAVNAWVSKDPADRRHRVDELSGHFRLPLMSLRELMSVVRPSELLAADFILDAVTYHAD 1338
            ++ F  HR++ A+  +YFRALLYGGM ES+   ++ L D   EAF  ++ Y+YTGR  L  +    ++D  SLAH++G  +L  + +E L   +N  +VC   +VA  Y   +L   C+  +  N   VL +E FL L  P LL++V        E D+FQA+  W   +P +      E+    RLPLMSL EL++VVRPS LL+ D ILDA+   ++
Sbjct:   44 KKRFPAHRVILAARCQYFRALLYGGMRESQPEAEIPLHDTTAEAFTMLLKYIYTGRATLRDEKEEVLLDFLSLAHKYGFPELEDSTSEYLCTILNIQNVCMTYDVANLYSLPKLTCMCFIFMDRNAQEVLSSEGFLSLSKPALLSIVLRDSFAAPEKDIFQALMNWCKHNPKESHA---EIMKAVRLPLMSLTELLNVVRPSGLLSPDAILDAIKVRSE 259
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig200.41.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FPG9_ECTSI1.290e-18254.50BTB (POZ) domain containing 9 n=1 Tax=Ectocarpus s... [more]
A0A6H5L8F4_9PHAE2.820e-13852.44BTB domain-containing protein n=1 Tax=Ectocarpus s... [more]
A0A444UQ67_ACIRT3.920e-3840.65BTB/POZ domain-containing protein 9 n=2 Tax=Acipen... [more]
A0A444U0N6_ACIRT3.110e-3738.36BTB/POZ domain-containing protein 9 n=5 Tax=Acipen... [more]
A0A8J1U5F6_OWEFU3.950e-3738.03BTB/POZ domain-containing protein 9 n=1 Tax=Owenia... [more]
A0A6P7XEI7_9AMPH1.400e-3640.18BTB/POZ domain-containing protein 9 n=2 Tax=Gymnop... [more]
A0A8C5RET3_LATLA3.010e-3638.36BTB domain containing 9 n=2 Tax=Sauria TaxID=32561... [more]
A0A6P8PVN7_GEOSA3.300e-3639.27BTB/POZ domain-containing protein 9 n=6 Tax=Tetrap... [more]
V8NQV2_OPHHA6.940e-3638.36BTB/POZ domain-containing protein 9 (Fragment) n=1... [more]
A0A6P9CKX8_PANGU2.520e-3538.36BTB/POZ domain-containing protein 9 n=5 Tax=Amniot... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig200contigP-littoralis_Contig200:164461..170157 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Pylaiella littoralis U1_48 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog2880.D7FPG9
PFAMsBACK,BTB
Model size1927
Max annot lvl2759|Eukaryota
KEGG koko:K10480
Hectar predicted targeting categoryother localisation
Exons7
Evalue3.24e-183
EggNOG OGsKOG4350@1|root,KOG4350@2759|Eukaryota
Descriptioncircadian sleep/wake cycle, non-REM sleep
Cds size1812
COG categoryS
BRITEko00000,ko04121
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig200.41.1prot_P-littoralis_Contig200.41.1Pylaiella littoralis U1_48polypeptideP-littoralis_Contig200 164510..170091 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789982.512038-UTR-P-littoralis_Contig200:164460..1645091680789982.512038-UTR-P-littoralis_Contig200:164460..164509Pylaiella littoralis U1_48UTRP-littoralis_Contig200 164461..164509 -
1680789982.6013181-UTR-P-littoralis_Contig200:170091..1701571680789982.6013181-UTR-P-littoralis_Contig200:170091..170157Pylaiella littoralis U1_48UTRP-littoralis_Contig200 170092..170157 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789982.525105-CDS-P-littoralis_Contig200:164509..1647751680789982.525105-CDS-P-littoralis_Contig200:164509..164775Pylaiella littoralis U1_48CDSP-littoralis_Contig200 164510..164775 -
1680789982.5367444-CDS-P-littoralis_Contig200:165273..1653831680789982.5367444-CDS-P-littoralis_Contig200:165273..165383Pylaiella littoralis U1_48CDSP-littoralis_Contig200 165274..165383 -
1680789982.5474172-CDS-P-littoralis_Contig200:165603..1657371680789982.5474172-CDS-P-littoralis_Contig200:165603..165737Pylaiella littoralis U1_48CDSP-littoralis_Contig200 165604..165737 -
1680789982.5566852-CDS-P-littoralis_Contig200:166724..1668711680789982.5566852-CDS-P-littoralis_Contig200:166724..166871Pylaiella littoralis U1_48CDSP-littoralis_Contig200 166725..166871 -
1680789982.5660233-CDS-P-littoralis_Contig200:167554..1677111680789982.5660233-CDS-P-littoralis_Contig200:167554..167711Pylaiella littoralis U1_48CDSP-littoralis_Contig200 167555..167711 -
1680789982.5760942-CDS-P-littoralis_Contig200:168502..1686921680789982.5760942-CDS-P-littoralis_Contig200:168502..168692Pylaiella littoralis U1_48CDSP-littoralis_Contig200 168503..168692 -
1680789982.587255-CDS-P-littoralis_Contig200:169283..1700911680789982.587255-CDS-P-littoralis_Contig200:169283..170091Pylaiella littoralis U1_48CDSP-littoralis_Contig200 169284..170091 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-littoralis_Contig200.41.1

>prot_P-littoralis_Contig200.41.1 ID=prot_P-littoralis_Contig200.41.1|Name=mRNA_P-littoralis_Contig200.41.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=604bp
MDFILKISKKSSFLPQEGKGGEKTAAAQSHVDHSDGVLAGLFELVDSDTC
DVTFVVVASGSGYHPDLSDTRARSTSMDGDGGEPRRGTPERARRQHESRT
EHSTCSYSRSSSSAVSVEGVAGRDIAVEGVSDDRRRSSRQQVPSASTAAT
TEGIVRVAGRGGEREANRGGGGGECEKEVDELRPGGPPTTTSSTPRIPAT
TATCGGCNSRREFRCHRLLFASCSEYFRALLYGGMSESETRKVELSDVAP
EAFEAIMTYVYTGRVRLAADNVMDIFSLAHRFGMDKLLRACAEVLDQCIN
CDDVCRVLEVAEYYGHAELATKCWDLIKENTPRVLKTESFLELPWPFLLT
LVSDGELQVDEADLFQAVNAWVSKDPADRRHRVDELSGHFRLPLMSLREL
MSVVRPSELLAADFILDAVTYHADPDQWSGDSLMVRPRGKRFRWDSSSLA
AGAWTADDNRTVTTSVGDWVGVYGDRTMRSGFHRWSVRANKVGRSERKSA
WGAIIGVAPPRSLNDSRPYLPVTGFIIGTGDRKLGGHTALDDYASVVVAD
GDVVTVAYDADGGVLSFCVNGASLGEAYTGLPGPMVAALAVNAAGAMWEM
VVP*
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mRNA from alignment at P-littoralis_Contig200:164461..170157-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-littoralis_Contig200.41.1 ID=mRNA_P-littoralis_Contig200.41.1|Name=mRNA_P-littoralis_Contig200.41.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=5697bp|location=Sequence derived from alignment at P-littoralis_Contig200:164461..170157- (Pylaiella littoralis U1_48)
CCGGTACACAGGACAGCCGTAGCAGCAACATCAGCAGGGTGTAATAGGGA
CATTCAATTACTCGACATGGACTTCATTTTGAAAATATCCAAAAAATCCT
CATTCTTGCCACAGGAAGGGAAAGGCGGGGAGAAGACGGCGGCTGCTCAA
TCCCACGTAGACCACTCCGACGGTGTGTTGGCGGGGTTGTTCGAGTTGGT
GGACTCGGACACCTGTGACGTCACTTTTGTGGTGGTTGCCTCCGGCAGCG
GTTATCATCCTGATTTGTCTGACACTCGTGCTCGGTCGACGTCGATGGAT
GGAGATGGCGGCGAACCAAGGCGTGGGACACCAGAACGAGCTAGGAGACA
GCACGAATCGCGCACTGAGCACAGCACTTGCAGCTACAGCAGGAGCAGCA
GCAGCGCTGTTAGTGTTGAAGGGGTCGCGGGTAGAGACATTGCTGTTGAG
GGTGTTAGTGACGACAGGAGGAGGAGCAGCAGGCAACAAGTACCGTCGGC
ATCAACAGCAGCAACGACTGAAGGGATAGTAAGGGTGGCAGGACGCGGAG
GGGAAAGAGAGGCAAATAGAGGAGGAGGAGGAGGAGAATGCGAAAAAGAG
GTGGACGAGCTGAGACCTGGAGGCCCACCAACGACGACGTCGAGCACCCC
TCGTATTCCTGCCACTACTGCTACGTGTGGCGGTTGTAATAGCCGCAGGG
AATTCCGCTGCCATCGCCTCCTGTTCGCCTCGTGCTCTGAGTACTTCCGG
GCTCTCCTGTATGGCGGTATGAGCGAGTCGGAGACGAGGAAGGTCGAGCT
GAGCGACGTGGCGCCCGAAGCGTTCGAGGCCATCATGACCTACGTCTACA
CCGGCCGTGTGAGGCTGGCCGCGGGTGAGCGGATAAGAAAGAGTCCGATG
AGAGAGGAACCTACAGGAAACTGCCACGAGTATCTACTGCTTTTTTCGTA
TACACCGCTTTGCCTCATTTCCTTTCTAGAGCCGGATGAGATGAGAACAG
ATTGATTTACAATCATGCATATACTATCGCATCTGCTGCTGCTGCTGCTG
CTGCTGCTGCTGCTACTGCTTAATACAGCAGGTACCCGCCATTTTTCATA
AACCGACTGACTCAAAACAGCAAATGCTATCGCATCTGCTGCTGCTACTC
GTACATATTACCTGGTAGGACTTACCATCCATTCTCCATACCTCGTATCA
TAGTCCGGAGTTGCCATACACAACTTCTGCATTGTGTTGGTATGGTTTCC
CTGGGTGCTTTGTCCACGGCCTCAAAACAACAAGCAACCCAACCCGTATA
TTCATGTCTGGTGGTCATGTGTTTATCCCATAGCGTACACCGTACATTGT
ACACAAAGCGGCAAAGCGGCCAACGACTACTCATATAAACAAATGTACAT
TTATACGATCTCCTAACACACCAACAATTTTTGTTCTGAACAAAAACCTA
ACAACCAATCTCCAGACAACGTGATGGATATTTTCTCTCTGGCGCATCGC
TTCGGGATGGACAAGCTCCTAAGAGCGTGCGCGGAGGTTTTGGACCAGTG
CATAAACTGCGACGACGTCTGTCGGGTCCTGGAGGTGGCGGAGTACTACG
GACACGCCGAGCTGGCGACAAAGTGCTGGGATCTCATCAAGGAGAACACG
CCCAGGTATGATGCCCCACGAAGATTGGTGTCGGTCCGGATTTGTTTTTT
CACCGAATTTGTTTTTGTTTCATGCAGTCAGTAGAAAAAAAAAACACTTT
TGCGACCGATGCGATGCGGTTTCTACTTCGCAGCTACCATACGATTCTAC
TCCGTAATAAATGGATATGACTACGAACCGAAAAAGCGGGAACATATTAT
AGCTGCTTGACGTATTAATTACAATTGGGTGTTCGTTGCGACTCGTACTG
TACCGTAGTTTGTTCTGTTTCCTCGTCTCCTGCTGTTGCCAGAGACGAAC
ACTATGCCTGTGCTCAGAAATCCGTATATAAACTTGTGTATACTTCGCAA
GAATATATATATATATCGCCCAGTGGTGCCGGGAGTGCAGTACAGCCTGC
GCTCGACCTCGCAACGAAATTATGCTTGGGGGGATTTACACAACGGAGTA
CAAGTCATGCATAGCGTCGCCAGTGCGATGTTTGCGTGATACCTCTGCAG
CACAGAAAGAATCACGAAAAAACCGACCGACCGGCTGCTATGATCGAGGA
AGATTATGATTATGATTATGATTATGACACCAAGGTCAGTAAACACACGG
TATTGGTTCTTCCGGCGGAAAATCAACCCTCTTCTGATGCTGCAGTGCAT
ATTTGGCATGGTAAAACTAGCAAGAGTAAACGTTGATGAAGCACCGCAAA
CCTTCGTCCCCCCCCCCTCCCTCCCTCCCCTCCCACTGCCTTCCCTTCCC
CCTTCTTTCCCCATAACATGTTCCAAACTCGATTGATTGACACCAGAGTG
TTGAAGACCGAGAGCTTTTTGGAGCTACCTTGGCCTTTCCTGCTAACTCT
AGTTAGCGACGGGGAGTTGCAGGTCGACGAGGCCGATCTTTTTCAGGCCG
TGAATGCTTGGGTGTCCAAAGACCCGGCCGACCGGCGGCATCGCGTGGAC
GAGGTACCGCACGGATTTGATGCTATGTTCTAGCTTTTCTTTTCTTTTCT
TTTCTTTTCTTTGCCGCACGTTACTCAAACCATACCATGTTATACTCGAG
ATCAATTTTTGCACGGTAGTGTGTGGTGACTGTTCTATGGTCTGTGTAAA
GATGTACAGATGTCTACTGAACTACTAGTCTGCGACTGACTGGTGATTCG
GTGGATGTGTGCACATCTGAACGAACGTACAACCAGCCGGGTTGTAGTGT
ACACCTCAATTAGTGAGGGTACCTGGTGCAGTGAGAGTGTTGGAGTGCAT
TCACTGCTTTAGCTAACCACCACGCACCCGGCTGGCTGCAGTACTCTGCA
CAGTGCCATATGTGCCTCCCCCGCACCGCGCTCTCTACCGGTACACAGCC
GCACCTGTTCACACACCTACGGTTGCGATACCTCGTGGTGCTGCTCGAGC
GTCTACCTTGTACTTCGAGTATATATTAGTCCGCTTTGCAGATTTTATTT
TCTACGCTCAATCTTTACCAACAAAATCATAAAAAAAAACGCGTGGTATC
CCTCACTTCCTCCCCCGCCCCTCCTCCCTCTGCCTGCTCCATCATGATGC
AATTCCCACCCCTGCGCGCGCACACACACCAATCGTGCGGGGGGGCTTAT
TTTTTTTCCGCCCTGGACAACAAACAAAAACATCAGCTGTCCGGCCACTT
CCGCCTCCCTCTCATGTCTCTGAGAGAGCTCATGTCAGTGGTCCGCCCAT
CCGAACTGCTGGCGGCCGATTTCATTCTCGACGCTGTCACCTACCATGCG
GATCCGGATCAGTGGTCGGGTGACTCGCTCATGGTGAGAGCCGGGTCGAA
TTGGTTCTGGTCGAATTCGTCGCCATTCGTTTTTGCTCATAAATAGAAGA
AGCCTGGTGTGACAGGAAGACAATGAAACCTGGGGGTGACGTGTTGTGTG
TGTACCAGGTATGTATGTGCGCGGAGAAAACGACAGCTCGCAAGCAGAGA
GAAAAGGAGAAACCATCACCTTGTAAAAATACCATGTTTTGTCGTCACGT
CGTAAAAAATTGTGCTTCAGGCTGGGTCGGTGTGTGTTGACTGGGTCGAT
TTGTAGGTTAGCTGGTGGAATGATCACTTGGTTCGTCGCGTATGGATCGC
ACTGTTCGTGCGCCCTTCTATCATTCTCGGCATGGCTTCTGTATGCCTAC
TCCGTACATGTACGAGTATGCACGTTTCGGAACCGCTGTATTTGTTTTAC
GGTCTAACTGTGGTTGACTTTCGATTGGATTCGTTGCGTTTGTTTTAAGA
GCTCATTGCAACCGCACCCTAGTCGGTTCGATTGTTGTCGTACCTTGGCG
AGGAAAATGATGTGCGTTCCCCCGCTCGTGCTTGCTTCGCTGCTGCCGCT
GCTGCTGTGGACTATCACCCTCTCGTCGTTGATATTCTTTGCGGACTCCA
AACTTACTACCCTGTTGCTGCATCGCCTCTCGCTTTTGTCGCCAGGTTTG
TTCTTGTTCCTCTCTACCTCGATTTGTCACGTTGTATTTTACGTCGGCAG
CACTGCGTTGTACAGCTATTTTTTTATTTGCTACTACCGGTGGGAGCACT
GCGGTACTATATGAACACAATAACCGCAGATTACGTGGATGTTTTTGAAA
GAGTGAGACGTCTCGACCCTAGCTGACGCCCCTCCCCCCCCTCCCCCCCA
AAGCATTTTTTCATAACTCAGACTTCGAAGGACAAAAAACCGACCGATTT
AGAAAAACTGCGGGCACTCAGAAGTACCTCTAATTTATACCAACAAAGCT
TCAATCTCGTATTTTCAAAGGTCCGCCCACGCGGAAAGAGGTTCAGGTGG
GACTCGTCAAGCCTGGCTGCAGGAGCGTGGACAGCCGACGATAACAGGAC
CGTCACGACCTCGGTGGGCGACTGGGTTGGCGTGTACGGAGATCGGACCA
TGAGGTGCGCGGCTTGGTCGGTGGGTAGGTGGGATCTGTTTTGGTTTTGT
GGCTGTGGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTTCTC
TCAATCTATCACCATTGTACTTTTTTGTGTTCCGCGCCGTTGTGGTTTGT
TCATGTCCTATTTTTTACTTGCGTTATTCCTGTTGCTGCCGGCGTGGTCG
TCTGTGACTTGATATCGACAACAGGTCTGGATTTCACCGGTGGTCCGTGC
GAGCGAACAAGGTCGGCCGTTCCGAGAGAAAGTCGGCTTGGGGGGCCATC
ATCGGGGTCGCCCCTCCGCGTTCGCTGAACGACTGTGAGGAGCCCGATTC
TGTCTGCGCTGCTGCATACGCGTGTGCCTTTTTTTATCGTGTTGTCAGCA
TGCATGGTAGATCGAACCGCGCTCAACGACCAACCCAATGAAAAACCGTC
AGCCCCGAGTTTTGAGTTTAACCAGACACGCCTTTCGTCAATCATGGTCT
CTTTCTACTCCTCCTGCTCCCCCCCCTCCTCCTCCTCCTCTTCCTCTTCC
TCTTGTGTTCGGTTGCACATCTATTTATGATTCATTTATTTGCTTTTACG
TTTCCACAGTAAATACCCATGCCAGCGCTGCGTGTTGACTGACAGAAATT
TGTTCGTGGTCTTTTACTTGTCTTTTCTCGTCTCGTCTCTCTCATCTCTT
TTTTCGTTTTTTTCAAGCCGCACGTATTCCGAACCAGCTCCGTTTGCCCC
CGCCTCCGCCTCCGCCCCCGCCCCCGCCCCCCCCCCCGTCCCCCCCCCCC
CGCTCCGCCTTTCCCGCGAAACGCACAAGCAGCCCGACCGTACCTGCCGG
TTACGGGCTTCATTATCGGCACGGGCGACCGCAAGCTGGGCGGCCACACG
GCCCTGGACGACTACGCTTCCGTCGTCGTGGCGGACGGGGACGTGGTCAC
GGTGGCGTACGACGCCGACGGAGGCGTCCTGTCTTTCTGCGTGAACGGGG
CGAGTCTGGGAGAGGCGTACACGGGGTTGCCGGGGCCGATGGTGGCCGCG
CTTGCGGTCAACGCGGCGGGCGCCATGTGGGAGATGGTCGTACCGTAATA
TCCTCTGTCATGGCTGCCCCCCCCCCCCAAACAAAAATCTTACCCCC
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Coding sequence (CDS) from alignment at P-littoralis_Contig200:164461..170157-

>mRNA_P-littoralis_Contig200.41.1 ID=mRNA_P-littoralis_Contig200.41.1|Name=mRNA_P-littoralis_Contig200.41.1|organism=Pylaiella littoralis U1_48|type=CDS|length=1812bp|location=Sequence derived from alignment at P-littoralis_Contig200:164461..170157- (Pylaiella littoralis U1_48)
ATGGACTTCATTTTGAAAATATCCAAAAAATCCTCATTCTTGCCACAGGA
AGGGAAAGGCGGGGAGAAGACGGCGGCTGCTCAATCCCACGTAGACCACT
CCGACGGTGTGTTGGCGGGGTTGTTCGAGTTGGTGGACTCGGACACCTGT
GACGTCACTTTTGTGGTGGTTGCCTCCGGCAGCGGTTATCATCCTGATTT
GTCTGACACTCGTGCTCGGTCGACGTCGATGGATGGAGATGGCGGCGAAC
CAAGGCGTGGGACACCAGAACGAGCTAGGAGACAGCACGAATCGCGCACT
GAGCACAGCACTTGCAGCTACAGCAGGAGCAGCAGCAGCGCTGTTAGTGT
TGAAGGGGTCGCGGGTAGAGACATTGCTGTTGAGGGTGTTAGTGACGACA
GGAGGAGGAGCAGCAGGCAACAAGTACCGTCGGCATCAACAGCAGCAACG
ACTGAAGGGATAGTAAGGGTGGCAGGACGCGGAGGGGAAAGAGAGGCAAA
TAGAGGAGGAGGAGGAGGAGAATGCGAAAAAGAGGTGGACGAGCTGAGAC
CTGGAGGCCCACCAACGACGACGTCGAGCACCCCTCGTATTCCTGCCACT
ACTGCTACGTGTGGCGGTTGTAATAGCCGCAGGGAATTCCGCTGCCATCG
CCTCCTGTTCGCCTCGTGCTCTGAGTACTTCCGGGCTCTCCTGTATGGCG
GTATGAGCGAGTCGGAGACGAGGAAGGTCGAGCTGAGCGACGTGGCGCCC
GAAGCGTTCGAGGCCATCATGACCTACGTCTACACCGGCCGTGTGAGGCT
GGCCGCGGACAACGTGATGGATATTTTCTCTCTGGCGCATCGCTTCGGGA
TGGACAAGCTCCTAAGAGCGTGCGCGGAGGTTTTGGACCAGTGCATAAAC
TGCGACGACGTCTGTCGGGTCCTGGAGGTGGCGGAGTACTACGGACACGC
CGAGCTGGCGACAAAGTGCTGGGATCTCATCAAGGAGAACACGCCCAGAG
TGTTGAAGACCGAGAGCTTTTTGGAGCTACCTTGGCCTTTCCTGCTAACT
CTAGTTAGCGACGGGGAGTTGCAGGTCGACGAGGCCGATCTTTTTCAGGC
CGTGAATGCTTGGGTGTCCAAAGACCCGGCCGACCGGCGGCATCGCGTGG
ACGAGCTGTCCGGCCACTTCCGCCTCCCTCTCATGTCTCTGAGAGAGCTC
ATGTCAGTGGTCCGCCCATCCGAACTGCTGGCGGCCGATTTCATTCTCGA
CGCTGTCACCTACCATGCGGATCCGGATCAGTGGTCGGGTGACTCGCTCA
TGGTCCGCCCACGCGGAAAGAGGTTCAGGTGGGACTCGTCAAGCCTGGCT
GCAGGAGCGTGGACAGCCGACGATAACAGGACCGTCACGACCTCGGTGGG
CGACTGGGTTGGCGTGTACGGAGATCGGACCATGAGGTCTGGATTTCACC
GGTGGTCCGTGCGAGCGAACAAGGTCGGCCGTTCCGAGAGAAAGTCGGCT
TGGGGGGCCATCATCGGGGTCGCCCCTCCGCGTTCGCTGAACGACTCCCG
ACCGTACCTGCCGGTTACGGGCTTCATTATCGGCACGGGCGACCGCAAGC
TGGGCGGCCACACGGCCCTGGACGACTACGCTTCCGTCGTCGTGGCGGAC
GGGGACGTGGTCACGGTGGCGTACGACGCCGACGGAGGCGTCCTGTCTTT
CTGCGTGAACGGGGCGAGTCTGGGAGAGGCGTACACGGGGTTGCCGGGGC
CGATGGTGGCCGCGCTTGCGGTCAACGCGGCGGGCGCCATGTGGGAGATG
GTCGTACCGTAA
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