prot_P-littoralis_Contig20.166.2 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig20.166.2
Unique Nameprot_P-littoralis_Contig20.166.2
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length429
Homology
BLAST of mRNA_P-littoralis_Contig20.166.2 vs. uniprot
Match: A0A6H5KZ97_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KZ97_9PHAE)

HSP 1 Score: 215 bits (548), Expect = 5.490e-62
Identity = 177/350 (50.57%), Postives = 207/350 (59.14%), Query Frame = 0
Query:    1 MFTCCALFNLAEDDPADTEHLDALDEVDPTKQGDIRISI-GEDGSRGSGEFDRTPLASSPRFSAALQGADDAGSAAQHAETEELMARVRMSEAEAEGRAAAEAETTAQDAARSAEXXXAPAGEPGAAAQTGTNTANAETMRALREAESAVQAAEGEAEQRRVXXXXXXXXXXXXXXXXXXXMWRAEESQKVKEQVGTQAAEEAREAHRIAREGVSEERXXKAELARRQAAAARTQKAKDHLMSKLLSDEGLRLQKHGRNGKSVFRTLKSSDSECATLTWGRTLHDLRLMQEVRKGTDADPANPGATGTSELRRSKAASAALERSFSLLFPSRSLDFTVASNAAKTKYKTC 349
            MF+CCALF+   D+PADTEHL ALD+VD   +G++ I + G++   GSGEFD TP+ASSPR  AA + ADDA SA Q AE E L A++ MS +E EG+AAAEAE  AQ+A R AE   A A E   AAQT                                XXXXXXXXXXXXXXXXXXX                                     XX          A R + A+ +L ++LLSDEG+RL KHGRNGKS+ RTL+  D EC TLTWG+TLHDLRLMQEVR+GT+ DP+ P  TGTSELRRSKA  AAL+RSFSLLFPSRSLDFTVAS       K C
Sbjct:    1 MFSCCALFSQT-DEPADTEHLKALDDVDAAGEGEMSIKVDGDNMMAGSGEFDGTPVASSPRVLAAQRSADDASSAMQIAEREVLQAKIEMSRSEVEGKAAAEAEAAAQEATREAEADVAAAEEARIAAQTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-XXXXXXXXXXXXXXXXXXXXXXXXTAVRMETARKYLTARLLSDEGVRLLKHGRNGKSMHRTLRCPDQECGTLTWGKTLHDLRLMQEVRRGTEVDPSEPNYTGTSELRRSKAGRAALDRSFSLLFPSRSLDFTVASKGKTNANKWC 348          
BLAST of mRNA_P-littoralis_Contig20.166.2 vs. uniprot
Match: D8LJL6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJL6_ECTSI)

HSP 1 Score: 99.0 bits (245), Expect = 2.060e-19
Identity = 110/246 (44.72%), Postives = 128/246 (52.03%), Query Frame = 0
Query:   46 GSGEFDRTPLASSPRFSAALQGADDAGSAAQHAETEELMARVRMSEAEAEGRAAAEAETTAQDAARSAEXXXAPAGEPGAAAQTGTNTANAETMRALREAESAVQAAEGEAEQRRVXXXXXXXXXXXXXXXXXXXMWRAEESQKVKEQVGTQAAEEAREAHRIAREGVSEERXXKAELARRQAAAARTQKAKDHLMSKLLSDEGLRLQKHGRNGKSVFRTLKSSDSECATLTWGRTLHDLRLMQEV 291
            GSGEFD TP++SSPR  +A + ADDA SA Q AE E L A++ MS +E EG+AAAEAE  AQ+A R AE   A A E   AAQ                                 XXXXXXXXXXXXXXXXXXX                                     XX          A R + A+ +L ++LLSDEG+RL KHGRNGKS+ RTL+  D EC TLTWG+TLHDLRLMQE 
Sbjct:    4 GSGEFDGTPVSSSPRVLSAQRSADDASSAMQVAEREVLQAKIEMSRSEVEGKAAAEAEAAAQEATREAEADVAAAEEARIAAQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX----TAVRMENARAYLTARLLSDEGVRLLKHGRNGKSMHRTLRCPDQECGTLTWGKTLHDLRLMQET 245          
BLAST of mRNA_P-littoralis_Contig20.166.2 vs. uniprot
Match: D7FVZ1_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FVZ1_ECTSI)

HSP 1 Score: 53.9 bits (128), Expect = 8.700e-5
Identity = 35/104 (33.65%), Postives = 50/104 (48.08%), Query Frame = 0
Query:  248 EGLRLQKHGRNGKSV------------FRTLKSSDSECATLTWGRTLHDLRLMQEVRKGTDADPANPGATGTSELRRSKAASAALERSFSLLFPSRSLDFTVAS 339
            EG  L KH R+GK+             FR  K      + L+ G     L  + +VR GTD DP +   TG++ LR+       L + FSL++ SR+LDF+  S
Sbjct:   55 EGFNLVKHSRSGKASNRVIYTVDNGVHFRMAKGKKGSLSKLSLGTQEFSLLSLAQVRMGTDKDPEHEDKTGSNPLRQGCPTEEDLRKGFSLVYLSRTLDFSCES 158          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig20.166.2 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A6H5KZ97_9PHAE5.490e-6250.57Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LJL6_ECTSI2.060e-1944.72Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7FVZ1_ECTSI8.700e-533.65Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 135..162
NoneNo IPR availableCOILSCoilCoilcoord: 214..234
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 81..98
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 153..171
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 292..313
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 347..364
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 19..185
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 345..364

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig20contigP-littoralis_Contig20:737539..766019 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig20.166.2mRNA_P-littoralis_Contig20.166.2Pylaiella littoralis U1_48mRNAP-littoralis_Contig20 737197..766220 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig20.166.2 ID=prot_P-littoralis_Contig20.166.2|Name=mRNA_P-littoralis_Contig20.166.2|organism=Pylaiella littoralis U1_48|type=polypeptide|length=429bp
MFTCCALFNLAEDDPADTEHLDALDEVDPTKQGDIRISIGEDGSRGSGEF
DRTPLASSPRFSAALQGADDAGSAAQHAETEELMARVRMSEAEAEGRAAA
EAETTAQDAARSAETETAPAGEPGAAAQTGTNTANAETMRALREAESAVQ
AAEGEAEQRRVEEEESAIAARQAESEAKQAMWRAEESQKVKEQVGTQAAE
EAREAHRIAREGVSEEREEKAELARRQAAAARTQKAKDHLMSKLLSDEGL
RLQKHGRNGKSVFRTLKSSDSECATLTWGRTLHDLRLMQEVRKGTDADPA
NPGATGTSELRRSKAASAALERSFSLLFPSRSLDFTVASNAAKTKYKTCP
PPPPPPRPSPLPSPLPAASPLVFILNLHLDRGHFLCNNCSSRANRSPLLL
PAGRAANDKQTQEAFCVRGGGYLGTVLE*
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