mRNA_P-littoralis_Contig20.129.1 (mRNA) Pylaiella littoralis U1_48

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-littoralis_Contig20.129.1
Unique NamemRNA_P-littoralis_Contig20.129.1
TypemRNA
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Homology
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BLAST of mRNA_P-littoralis_Contig20.129.1 vs. uniprot
Match: D8LJM7_ECTSI (C3H1-type domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LJM7_ECTSI)

HSP 1 Score: 660 bits (1703), Expect = 5.100e-236
Identity = 332/432 (76.85%), Postives = 363/432 (84.03%), Query Frame = 1 
Query:    1 SSRGGRYSSXXXXXXXXGDGSYDGGRGRGGRASVGGRGMGRGHG-----GDTITFSLCKFYAAGHCDRSASCRHRHAVQKVSEAQVSAQADGFTGAVRSLVQWKDKPDHVFSACDDGTIKMWSTTDGSTWVQVTSVQTHEWRHVGALQEVNGTLFVGYGSPYTHSPDVTVDALRVLDLGGGSAEEVVNPVTGFAHSSRINCVAVVKVGADTRIYSGDEQGRITAWARPTPGAPFAQMAQLDGHARAVTSLISTTSNGMLWSSSEDATIRIWNTATNTCEHTITKENGGHEGMVVALAIGQSAVEGNLAEYVISGSKDGTMGVFQAADGALTYKHKCGTGVSTIAAFDPTPGTSALLLVGYEDGTIAVRNFPEFALAFELHPDSIYVGHSKRVHALLPFNNPAIEDCYFLSAGEEGKMLCWKVHKLTDEAPVK 1281
            S RGGRYSS        GD SY+G  GRGG    G              GDTITFS+CKFYAAG+CDR+ASCRHRHAVQKVSEA VS ++DGF GAVRSLVQWKDKPDHVFSACDDGT+KMWSTTDGSTW QVTSVQ  EWRHVG LQEV G L+VGYG+PY H  DVTVDALRV+DL  GS +EVV+ VTGFAH+SRIN + V KVGA+ R+Y+GDE+GRITAWARP+PGAPFAQ+AQL+GHARA+TSL+ST SNGMLWSSSED TIRIWNT TN C HTITK+NGGHEG V ALAIGQSA EG LAEYVISGSKDGTMGVFQAADG LTYKHKCGTGVS IAAFDPTPGTSALLLVGYEDGTIAVRNFPEFALAFE+HP S+YVGHSK V ALLPFNNP+I+D YFLSAGE+G M+CW VHKLTD +P K
Sbjct:   17 SGRGGRYSSRGG-----GDSSYEGRGGRGGYNPAGXXXXXXXXXXXXXXGDTITFSVCKFYAAGNCDRAASCRHRHAVQKVSEAVVSEESDGFRGAVRSLVQWKDKPDHVFSACDDGTVKMWSTTDGSTWTQVTSVQMTEWRHVGDLQEVEGVLYVGYGTPYAHLADVTVDALRVMDLTSGSTQEVVSSVTGFAHASRINRIMVAKVGAEPRVYTGDEEGRITAWARPSPGAPFAQLAQLEGHARAITSLVSTASNGMLWSSSEDGTIRIWNTGTNACVHTITKDNGGHEGPVAALAIGQSAAEGTLAEYVISGSKDGTMGVFQAADGGLTYKHKCGTGVSAIAAFDPTPGTSALLLVGYEDGTIAVRNFPEFALAFEIHPTSLYVGHSKPVLALLPFNNPSIDDGYFLSAGEDGTMMCWNVHKLTDPSPAK 443
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BLAST of mRNA_P-littoralis_Contig20.129.1 vs. uniprot
Match: A0A835YKE1_9STRA (WD40-repeat-containing domain protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YKE1_9STRA)

HSP 1 Score: 150 bits (378), Expect = 1.900e-37
Identity = 102/283 (36.04%), Postives = 149/283 (52.65%), Query Frame = 1 
Query:  418 GALQEVNGTLFVGYGSPYTHSPDVTVDALRVLDLGGG---SAEEVVNPVTGFAHSSRINCVAVVKVGADTRI-YSGDEQGRITAWARPTPGAPFAQMAQLDGHARAVTSLISTTSNGMLWSSSEDATIRIWNTATNTCEHTITKENG-GHEGMVVALAIGQSAVEGNLAEYVISGSKDGTMGVFQAADGALTYKHKCGTGVSTIAAFDPTPGTSALLLVGYEDGTIAVRNFPEFALAFELHPDSIYVGHSKRVHALLPFNNPAIEDCYFLSAGEEGKMLCWKV 1251
            GA   + G    G   P      +TV  +R+L+L GG   + E V++    +AH+  INC+A +K  A   + +SG ++G I AW     G  F     L+GH R VT L       MLWS+S+D T+R+W+TAT  C   I    G GH+G V  +A G  ++EG   EY+++GS D +                    V+ +  F  +P +  LLL+G +DG+IA+R+FP F+LAFEL    + VGH   V ALLP   P   + YF+S  E+GKM+ W++
Sbjct:  130 GAPGALRGDDAAGALQPPRAERMITVGMIRMLNLRGGEPAAVEVVISDKVPYAHTHPINCLAQLKDAAGALVLFSGGDEGLIRAWK--AQGTGFQLGGVLEGHVRGVTCLCMV--GNMLWSASKDHTVRVWDTATMACLGIIGSTGGLGHKGAVTCMA-GPLSIEGEQGEYMVTGSADKS--------------------VTALTCFKTSP-SGPLLLIGSDDGSIALRDFPGFSLAFELSAAVLNVGHRTPVRALLPLEIPG-PNLYFMSGAEDGKMMMWQM 385
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BLAST of mRNA_P-littoralis_Contig20.129.1 vs. uniprot
Match: A0A6U5LIP5_9STRA (Hypothetical protein n=1 Tax=Corethron hystrix TaxID=216773 RepID=A0A6U5LIP5_9STRA)

HSP 1 Score: 102 bits (254), Expect = 5.170e-20
Identity = 97/328 (29.57%), Postives = 139/328 (42.38%), Query Frame = 1 
Query:  313 VFSACDDGTIKMWSTTDGSTWVQVTSVQTHEWRHVGALQEVNGTLFVGYGSPYTHSPDVTVDALRVLDLGGGSA--------EEVVNPVTGFAHSSRINCVAVVKVGAD-TRIYSGDEQGRITAWARPTPGAPFAQMAQLDGHARAVTSLISTTSNGMLWSSSEDATIRIWNTATNTCEHTITKENGGHEGMVVALAIGQSAVEGNLAEYVISGSKDGTMGVFQAADGALTYKHKCGTGVSTIAAFDPTPGTSALLLVGYEDGTIAVRNFP------EFALAFELHPDSIYVGHSKR-VHALLPFNNPAIEDCYFLSAGEEGKMLCWK 1248
            +FS C DGT ++W +            +      VGAL   N  LF G+       P V V ++   +L   ++        +  V+P   +AH   +  +  V  GA    + S  E G I  W   T    F     L GHARAV+ L    S G+LWS SED +IR+W+ +  +C   I   + GH G V +L    S     L  +V S S DGT+  +  A G +      G GV TI       G + LL+ G E G I VR+ P         L  +L  D     H+   V  +     PA     F S+G++GK++ W+
Sbjct:  133 LFSGCHDGTWRLWDSAASFR----KQFENEMGGRVGALVVSNNLLFCGFEKECPLLPGVKVGSIHAWNLQNAASPPQEFHAEDSAVHP---YAHGRIVTSLLPVPDGAGGVAVVSSSEDGLIRVWRFDTGTGKFMVFRSLMGHARAVSGLAY--SEGLLWSGSEDHSIRMWDMSKGSCGKVIAGGSEGHSGPVTSLLAWGSE---KLGAFVFSSSLDGTIKAWDPA-GKMLKMESHGDGVMTIVTTTDEAG-NPLLVCGLERGNIMVRSLPGAGDLPALTLLIKLS-DQYTCSHTNGPVRCVQAGAGPA---GIFYSSGDDGKLMVWQ 442
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BLAST of mRNA_P-littoralis_Contig20.129.1 vs. uniprot
Match: A0A7S3HF87_9STRA (Hypothetical protein n=2 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3HF87_9STRA)

HSP 1 Score: 96.3 bits (238), Expect = 5.380e-18
Identity = 94/383 (24.54%), Postives = 170/383 (44.39%), Query Frame = 1 
Query:  124 GHGGDTITFSLCKFYA-AGHCDRSASCRHRHAVQKVSEAQVSAQADGFTGAVRSLVQWKDKPDHVFSACDDGTIKMWSTTDGSTWVQVTSVQTHEWRHVGALQ--EVNGTLFV-GYGSPYTHS-PDVTVDALRVLDLGGGSAEEVVNPVT-GFAHS-SRINCVAVVKVGADTRIYSGDEQGRITAWARPTPGAPFAQMAQLDGHARAVTSLISTTSNGMLWSSSEDATIRIWNTATNTCEHTITKENGGHEGMVVALAIGQSAVEGNLAEYVISGSKDGTMGVFQAADGALTYKHKCGTGVSTIAAFDPTPGTSALLLVGYEDGTIAVRNFPEFALAFELHPDSIYVGHSKRVHALLPFNNPAIEDCYFLSAGEEGKMLCWKV 1251
            G G +  T+++C F A  G C R ++CR+ H +  V+    + +         +L+   D P  + S   D  +K+ +            + T      GA++  EV+GT  +     P +   PD TV  + +L+    S   +       + H    I    +  +   T + +   +G I  W        F Q+  L+GH RAVT+++   +  +LWS S D+T+R+W+ A+  C  T+   NGG  G   A+   +         ++ SG+ D  + ++    G+L +    G  V+++ AF  T G   +LL+G  DGTI VR+     + F L      + H+K + +++       + C F +  ++G+++ WKV
Sbjct:   59 GTGQEPATYNICSFDARGGSCSRGSACRYTHNLATVAFTIPANKEQPQPIKSLALLTMPDGP-KLLSGSTDSIVKVHNLASEKPGEDSVPIPT-----TGAVEHIEVSGTTIMWSVDEPISPDMPDNTVGMVYLLNSADMSTIAIKRSEDFPYTHPFGEIRSFTIAVIDGVTFVITAGGEGLIRTWRFDASKGGFEQIMVLEGHIRAVTTVL--LNGALLWSGSVDSTLRVWDLASGKCLATLAAANGG-PGHTQAVTCLEFVPNTGAEPFIASGAADNAVKLW-GTTGSLLHTVTHGAMVTSLKAFKDTLGGIQVLLIGLLDGTIHVRSCMSMKILFTLDAS---ICHTKAIWSIVDLG----QSC-FGAGSDDGQIVVWKV 423
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BLAST of mRNA_P-littoralis_Contig20.129.1 vs. uniprot
Match: A0A7R9WQC1_9STRA (Hypothetical protein n=1 Tax=Craspedostauros australis TaxID=1486917 RepID=A0A7R9WQC1_9STRA)

HSP 1 Score: 75.1 bits (183), Expect = 1.420e-11
Identity = 78/254 (30.71%), Postives = 112/254 (44.09%), Query Frame = 1 
Query:  550 PVTGFAHSSRINCVAVVKVGADTRIYSGDEQGRITAW---ARPTPG-APFAQMAQLDGHARAVTSLISTTSNGMLWSSSEDATIRIWNTATNTCEHTIT------KENG--------GHEGMVVALAIGQSAVEGNLAEYVISGSKDGTMGVFQAADGALTYKHKCGTGVSTIA-AFDPTPGTSALLLVGYEDGTIAVRNF------PEFALAFELHPDSIYVGHSKRVHALLPFNNPAIEDCYFLSAGEEGKM 1236
            P+  ++H++R++ + V+      ++ SG   G I  W   A    G   F     L GHAR VT L    +  +LWSSS D +IRIW+ A+  C+H IT      +++G        GH+  V  L    S        ++++ S DG +  +  + G        G GV TIA A D     + +LL+G E G I VRN       P F L   L      VGH   V AL     P+     F S G +GK+
Sbjct:   16 PMIAYSHATRVSALNVI---GGQKVISGSRDGCIRLWTFEASSNQGKGGFVLSKTLAGHAREVTGLA--VAENVLWSSSIDGSIRIWDLASGNCQHAITNSGTNAQQSGQPPAGGGQGHKDAVTCLIPFPSPS----GTFILTSSLDGDIKAWNGSTGQCVASESHGEGVVTIAMAADQK--NNQVLLIGLESGNIMVRNLLQTPNMPAFTLIMMLSLQ-YSVGHRGPVKALA--QGPSST---FYSGGGDGKV 252
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BLAST of mRNA_P-littoralis_Contig20.129.1 vs. uniprot
Match: UPI000B76F7ED (zinc finger CCCH domain-containing protein 48-like n=1 Tax=Hevea brasiliensis TaxID=3981 RepID=UPI000B76F7ED)

HSP 1 Score: 60.1 bits (144), Expect = 3.130e-6
Identity = 60/241 (24.90%), Postives = 101/241 (41.91%), Query Frame = 1 
Query:  154 LCKFYAAGHCDRSASCRHRHA-VQKVSEAQVSAQADGFTGAVRSLVQWKDKPDHVFSACDDGTIKMWSTTDGSTWVQVTSVQTHEWRHVGALQEVNGTLFVGYGSPYTHSPDVTVDALRVLDLGGGSAEEVVNPVTGFAHSSRINCVAVVKVGADTRIYSGDEQGRITAWARPTPGAPFAQMAQLDGHARAVTSLISTTSNGMLWSSSEDATIRIWNTATNTCEHTITKENGGHEGMVVAL 873
            +CKF+  G C    +C+  H+  Q  +   + A+ +G   +V   V      D +++   DGT+++W    G               HV  L    G+L       +   P++    +RV +L     +E       F     I  V  + V  D  +++G   G I  W       PFA++A L GH +AV  L   +    L+S S D T+ +W+  T  C+ T+     GH+ +V++L
Sbjct:   39 ICKFWVKGKCAYKNNCKFLHSWFQSGNGFSMLARLEGHKKSVVG-VALPSGSDKLYTGSRDGTVRVWDGNSGKC------------DHVFNLGFEIGSLICEGSWVFIGLPNL----VRVWNLSSEGNKE-------FCLDGPIGQVYALAVYKDL-LFAGTANGDILVWRGSFEANPFAKVATLRGHQKAVVCLNIGSGVNSLYSGSMDNTVTVWDLETLQCKQTL----NGHKDVVMSL 250
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BLAST of mRNA_P-littoralis_Contig20.129.1 vs. uniprot
Match: A0A7S0CBB5_9STRA (Hypothetical protein (Fragment) n=1 Tax=Proboscia inermis TaxID=420281 RepID=A0A7S0CBB5_9STRA)

HSP 1 Score: 57.4 bits (137), Expect = 4.360e-6
Identity = 51/166 (30.72%), Postives = 75/166 (45.18%), Query Frame = 1 
Query:  562 FAHSSRINCVAVVKVGADTRIYSGDEQGRITAW-------ARPTPGA--------PFAQMAQLDGHARAVTSLISTTSNGMLWSSSEDATIRIWNTATNTCEHTIT------------------KENGGHEGMVVALAIGQSAVEGNLAEYVISGSKDGTMGVFQA 960
            +AH+  ++ + V K   D  + SG + G I  W       A  TPGA         F  +  L GHAR +T L+   +  M+WSSS D TIR+W+  T  C+H IT                  +   GH   V +L + +S  EG   E+++S S DG +  + A
Sbjct:    1 YAHAMGVSSLLVTK---DMVVVSGSKDGTIRIWKFTTTNPAVATPGAVAPASPASEFLLLNTLFGHAREITGLV-LINMSMIWSSSTDYTIRLWDANTGQCQHLITSAEEKTPPPGGNMLAPADRAKKGHTHAVTSLLVWKS--EGG--EFILSSSLDGKVMAWSA 158
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig20.129.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 7
Match NameE-valueIdentityDescription
D8LJM7_ECTSI5.100e-23676.85C3H1-type domain-containing protein n=2 Tax=Ectoca... [more]
A0A835YKE1_9STRA1.900e-3736.04WD40-repeat-containing domain protein n=1 Tax=Trib... [more]
A0A6U5LIP5_9STRA5.170e-2029.57Hypothetical protein n=1 Tax=Corethron hystrix Tax... [more]
A0A7S3HF87_9STRA5.380e-1824.54Hypothetical protein n=2 Tax=Spumella elongata Tax... [more]
A0A7R9WQC1_9STRA1.420e-1130.71Hypothetical protein n=1 Tax=Craspedostauros austr... [more]
UPI000B76F7ED3.130e-624.90zinc finger CCCH domain-containing protein 48-like... [more]
A0A7S0CBB5_9STRA4.360e-630.72Hypothetical protein (Fragment) n=1 Tax=Proboscia ... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig20contigP-littoralis_Contig20:517283..527455 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Pylaiella littoralis U1_48 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog2880.D8LJM7
PFAMsF-box-like,WD40,zf-CCCH,zf-RING_UBOX
Model size1303
Max annot lvl2759|Eukaryota
KEGG koko:K10267,ko:K10646
Hectar predicted targeting categoryother localisation
Exons10
Evalue6.98e-236
EggNOG OGsKOG0274@1|root,KOG0274@2759|Eukaryota
EC2.3.2.27
DescriptionSCF-dependent proteasomal ubiquitin-dependent protein catabolic process
Cds size1170
COG categoryM
BRITEko00000,ko01000,ko04121
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig20.129.1prot_P-littoralis_Contig20.129.1Pylaiella littoralis U1_48polypeptideP-littoralis_Contig20 517397..527436 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789977.1693459-UTR-P-littoralis_Contig20:517282..5173961680789977.1693459-UTR-P-littoralis_Contig20:517282..517396Pylaiella littoralis U1_48UTRP-littoralis_Contig20 517283..517396 +
1680789977.2898092-UTR-P-littoralis_Contig20:527436..5274551680789977.2898092-UTR-P-littoralis_Contig20:527436..527455Pylaiella littoralis U1_48UTRP-littoralis_Contig20 527437..527455 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789977.1860456-CDS-P-littoralis_Contig20:517396..5174851680789977.1860456-CDS-P-littoralis_Contig20:517396..517485Pylaiella littoralis U1_48CDSP-littoralis_Contig20 517397..517485 +
1680789977.1981332-CDS-P-littoralis_Contig20:518719..5188611680789977.1981332-CDS-P-littoralis_Contig20:518719..518861Pylaiella littoralis U1_48CDSP-littoralis_Contig20 518720..518861 +
1680789977.2108061-CDS-P-littoralis_Contig20:521560..5216471680789977.2108061-CDS-P-littoralis_Contig20:521560..521647Pylaiella littoralis U1_48CDSP-littoralis_Contig20 521561..521647 +
1680789977.220545-CDS-P-littoralis_Contig20:522807..5228811680789977.220545-CDS-P-littoralis_Contig20:522807..522881Pylaiella littoralis U1_48CDSP-littoralis_Contig20 522808..522881 +
1680789977.230069-CDS-P-littoralis_Contig20:523414..5234831680789977.230069-CDS-P-littoralis_Contig20:523414..523483Pylaiella littoralis U1_48CDSP-littoralis_Contig20 523415..523483 +
1680789977.239145-CDS-P-littoralis_Contig20:524650..5247531680789977.239145-CDS-P-littoralis_Contig20:524650..524753Pylaiella littoralis U1_48CDSP-littoralis_Contig20 524651..524753 +
1680789977.2512124-CDS-P-littoralis_Contig20:525129..5252861680789977.2512124-CDS-P-littoralis_Contig20:525129..525286Pylaiella littoralis U1_48CDSP-littoralis_Contig20 525130..525286 +
1680789977.2619712-CDS-P-littoralis_Contig20:525987..5262201680789977.2619712-CDS-P-littoralis_Contig20:525987..526220Pylaiella littoralis U1_48CDSP-littoralis_Contig20 525988..526220 +
1680789977.2709389-CDS-P-littoralis_Contig20:526597..5266801680789977.2709389-CDS-P-littoralis_Contig20:526597..526680Pylaiella littoralis U1_48CDSP-littoralis_Contig20 526598..526680 +
1680789977.2794898-CDS-P-littoralis_Contig20:527303..5274361680789977.2794898-CDS-P-littoralis_Contig20:527303..527436Pylaiella littoralis U1_48CDSP-littoralis_Contig20 527304..527436 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-littoralis_Contig20.129.1

>prot_P-littoralis_Contig20.129.1 ID=prot_P-littoralis_Contig20.129.1|Name=mRNA_P-littoralis_Contig20.129.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=390bp
MGRGHGGDTITFSLCKFYAAGHCDRSASCRHRHAVQKVSEAQVSAQADGF
TGAVRSLVQWKDKPDHVFSACDDGTIKMWSTTDGSTWVQVTSVQTHEWRH
VGALQEVNGTLFVGYGSPYTHSPDVTVDALRVLDLGGGSAEEVVNPVTGF
AHSSRINCVAVVKVGADTRIYSGDEQGRITAWARPTPGAPFAQMAQLDGH
ARAVTSLISTTSNGMLWSSSEDATIRIWNTATNTCEHTITKENGGHEGMV
VALAIGQSAVEGNLAEYVISGSKDGTMGVFQAADGALTYKHKCGTGVSTI
AAFDPTPGTSALLLVGYEDGTIAVRNFPEFALAFELHPDSIYVGHSKRVH
ALLPFNNPAIEDCYFLSAGEEGKMLCWKVHKLTDEAPVK*
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mRNA from alignment at P-littoralis_Contig20:517283..527455+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-littoralis_Contig20.129.1 ID=mRNA_P-littoralis_Contig20.129.1|Name=mRNA_P-littoralis_Contig20.129.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=10173bp|location=Sequence derived from alignment at P-littoralis_Contig20:517283..527455+ (Pylaiella littoralis U1_48)
AGCAGCAGAGGAGGCCGGTACTCCTCTAGAGGCGGGAGCTACGACGGGAG
GGGGGACGGCAGTTACGATGGGGGTAGGGGTAGGGGGGGAAGAGCAAGCG
TCGGCGGTCGAGGCATGGGCCGCGGGCACGGGGGCGACACCATCACCTTC
AGCTTGTGCAAGTTTTATGCTGCCGGGCACTGCGACCGTTCGGCTAGCTG
CCGGTGAGTTTTCGTTGGGGGGGGGGGCAGGCGTACTCACTAAATCCTTG
CCTTAACCCTTTTACCCCCTCTGTGAAAAATCATGGAACCTTTTTTTTTA
AAGCTCTATAAATAAAGGCAAGTGAAGTGCGTCACTAAAAAAATGGCGAC
GCGTTCTCTTGCTCATAGAATGCGTTTGAGAATTGAGCGGTTAGCGAGGT
AAAAAATTAGCTATTGGGAGTCGCGTGATATTCCAAGTTACAAAAAACAA
AATGGCGACCCAAAATGGCGACATTTGGCTACCTGGGGGTAAGAGGGTCA
AGCCATCTGACCGTTCATCGCGCATTCAACCCTTCCGAACACGGACAAAC
AAAAGCACCAGCCGTACCTACCAGAGTCACCACCCGACACTACCAAACGA
TCGTATCGGAGCTCTCTCATGTACACCTTCGCTTCCCTCTCATCGACTGG
CCTCTCTCTCGTGGTCCGATATGTAAGTAATAGGCCAGCATCAGCGGTGT
TCTTGTCTTGTCTTCTTTTATGTTTTGCCTCTCCGTTGTGTTCTGGTGTC
TCGCCACATGCTCTAGCGTCATGTAGCATGTAGTAGCATTTGACCACGAA
TCTCAGGGGATGTCATCTCCGAAAGCATAGATGTAAGTTGTCTGTCTGGG
AGGTGTATGTTCTAGACTAGAGGGGGGACCGCCTACCGGTGGTGTTGTTC
GGGGGAGCTCGGTTGACCATCATGTCGCAAGCGGTCAAGTCGGTTGACCA
TTATGAGGGCAGGGCAGAGGAGGAGGGGAAAGAGCGTCGGGTGCGTGGCT
GGAGCTCGGGGGGGGGGGTGCACTCGTATAACTGCATCATTGGCTGTTTT
TCTGAAAACCCCCGGCCCTGTAAGATAATGCCTCCTCTGAATGAACAGCC
TTCCGCGACAAATACAGACCTAAATGGTGCTCCTCGTATACGCTCACCGC
GCTGTGCCTCTGCCCTCACGAATTGTGTTGTATCTCGCGTGTCTTGGTGT
TTGCTCTGTGTCTATCTTTGTGTCAGGCTGTGCCTTGGCGTCTGTTTGAT
GTCACACTCTTTTTATCTCTACAAACGCGTCTGTGTGTTATGCCTGCTGT
GTGTATGCGTGTTTGGCGTGATATCTGTCACACCCTGTCTCATTTGTTTC
TCTCGTCTCTCCGTCTGTGTATTTTAATACGTATGCTTTTCTCTCTCTCT
CCCTCTCTCTTTTTTTTTCTTCGTTTCCGTCAACCAGGCACCGACACGCG
GTCCAAAAGGTAAGCGAGGCACAGGTGTCCGCGCAGGCGGATGGGTTCAC
GGGAGCGGTTAGATCCCTGGTGCAGTGGAAGGACAAGCCGGATCACGTGT
TCTCGGCGTGCGACGATGGCACGATAAAGGTGGGCGGGGTTAGGTGGGTA
TCAAAGACTCAATTTGCTCACCTCACCGTCTTACCGTTGAGCAAAATCCT
CTGTGTGTGTCGTCCGTCCCCCCCCCTCGTCGCCTCTCGTTTCGAGTCTT
TTACGCTCGATGGTATCCCTGCAGCAGCAGCAGTGTCGATGCCAGTCAGG
GAGGGTACATAGCGCTTGAAAGACCTCGTTCAGGTACGAGTATAGGCTCA
TGAGCTATTCGCTACGAACAAGTTTTCGGCGAGAAGACGGAGGGGAAGTC
GAAGAAGTAGGCGGGGTGCTGCCGTTGCATGATACGAACATGTGACAATA
CTGATTTTGTCAAATCTTGTGATGTGGCACAGGGTGGATGGATGGGTGTA
GACGAAACGTGACTGCTATGTTGTGCGTGCGAAGTACGTTTTTTTTTACC
GGGGAATCGAGATGTAATTGTTTTGGGGTGAAATTTATACAAAACGTTGG
TCGACTGCTGTGATATCATATCGTACACAAATATGTTATCATACGTAACG
CTCTTGTACGTGTATCCACTGCTGTTTTGCAATGCGTCGTGTGCGGTGGC
GGCGGCGGCGGTTGGGTAGACGGTCCTGGGCAACGTACTGCTTTTCATGT
AAAACGACCACATGCGTACATGGTTTCAATGGATACACTACCAATTGCAC
GCTTGTATGCATCCCCGAATAGCATCAATGTAAAGCATGTATCGATCGTC
TTTGTTTGACCCGCCACGGGTGACACAGCTCTTTCCTTCAAAGCGCACAA
AAAAGGCTTTTCTGAGACGACGGAAAGGGCGGGAGGCTGAAAAGAACACC
GCACGGAAGAATATGATATACTTCAAGTATATCATATCGTGTTGTTGTCA
TCGCGGGTGCTTCGCTCGGGTGCCCGCCCGCACGCCCCCCGGCTGCAGCA
CCCACCCGCGCCGCCCGCGGTCTGGGGCTGCTGCGGCGGTCACGCCTTCA
CCTCGGGCCGCCTGTCATCGCGGGTGGCGTGGCTGCCGGCGCAGGCGCAG
GCGCGGCCGGCGCAGCCGCAACCGTAGGCGGCGCGGCGGGTGCAGCCGGG
CCGGGCCGGGAGGGCGGGCGGGCGCCCGGGCGAAGCACCCGCGATGATGA
ATACGATATCATATCATATTCTTCCGCATCGCTCAGAAGACCTCCTGGTT
GTTCCGCAGCCTCACTAAGTGTTTTTTTTTTTGCGATTGCTTCAGCTCCA
GCGGGAGAGAGCCAGATGCGATCGAAGCCTGGATTTCGTTGCCCAGGTTG
TCTAAAGCGGGTCAAATTTTTGGCCAAGTTATATAAGGCGGGTCAGAAGT
TGAACCACGCATGCTCCGTGCTGAATCTTGCTCCATCTGCTGGGTTCGTT
CGTAATTATTTTTGTTTTTTTCGAGGATGACGCGGCTATTTGTTTTTTTA
ATTTTTTTGGGAAGGCACACTTGTGATTGTTATCACCTGGTACATAAATG
AGTGATATACACCATTTTGAATGAACCAGGATCGACCGGAATACTGTAGC
AAACACGAAGCGAACCTAAAGCTCGTTTAAGCACTCTGGAGCAGGAAGAA
AGCGTCGGCGCTGCATCGAAAAGTTGAGGGTGATCGATCGCCAGAGGACC
CGTCTACAGCACAGCAGTATATATATATCTCTTGGAGAGTTTTCCAAAAA
TGTACAGTAGTACGATAGGCACCGTTCGATGTTCGTGGGCATGAATAGTA
GTTCGAAGTAGTACTCTGAAAGGAAGATAACAGGTTATGAGCCACGCCGA
CGAGCATCAAACGATGCCTAATGCTTTGCCTGTACCGCATGTATTTCTTT
GACTGCCTGTGTTTACACCATTTTTGGACGAAGATCCACACAGACGAGAA
GCGAGCACCAAACAAAGCGTGCTTCCACGTATCACCTACCTGCTAAAATC
TATGATATTCCCATCATGTCGTGCGATTCGAAGCAATTGCTCAGTAAGCT
GCATGCCCTCTGCTGCTGTGGTATGTATGTAGCAAGAGCAGTTTTGAATG
TGCAAGGAGTATCATGAGACAAGGAGGAAACCTGTTGTGGCAGGGGTGGG
AGTGGACATGTTTTGAGCCGGGGTGGGAAATGCAGTGTGGGGTGAACGTG
TGAGTCAATAACAGCATCATCGTCATCAACAGCAACAACAACAGCAACGC
ATGCCCTGCTCGCCACCAGAGCAACTTTGTCACTGCTCGTCGCACCCCGC
TGTGTTGTTCATGTGCAGTGAGTGTCGAAAGTGTTCTTACAGAAATCAAG
TTCTTACAGAAATCACGGCGTACATTTTGCATTTTGATTTTTTTCTAACC
TATGTCTTGATACTTGCCGCTACAGCTGTGCACTGAAATACAACAAAATG
CCACTTCGTATATTTTAATCGCCATTCTTATACTAGGCATCGTTTTTTTT
TTACTTCGAACACCTTTTCTAACGCTATTTCTAACATAATCTCATGTGAT
TTTTCATCTTGAATCACATGATCACATGTTACTTCTAACATTTTTCGGTA
CGATTTTCAGCAATTTTTTTAGTATTATTTCCAGTCCGATTCTAAGAACC
TACCCTTTCGAATACTTTTTCTGGTACTCCGGAGTATTAGTTTTTGGATG
GAAATGAATTCCTTTGTGTTTAGTGAAATGTCTCATGTTATTTCTAAAAT
TAGTTCCCTCGATCGGAACTGTGTCTAGATGTGGTCGACTACAGACGGAT
CGACCTGGGTACAAGTGACTTCGGTACAGACGCACGAGTGGCGACACGTC
GGTGCTCTCCAGGAGGTAAGAGGGCAGTGAGGAACTCTCGTGCCATGCGG
TCGAGGAAAAGTACCGTAGGTTGCATAAGATGCCACACCGGTGTGGTAAC
ATTTTGGATCTAAAAATATATATCAAAAAGAAAACACCGTAAAGTAGGCT
GCATAAGATGCCACACCGGTGTGGTAACATTTTGGATCTCGAAAAATACC
GCACCGGTGTGGTATTGCATTTTTGGATCGAGAAAAATGTCACACCGGTG
TGGTATCGTTTAATTTATTACCTGGGGTGTGGTTTCTTATGTCACCCTTA
AATTAAATGTATGTGTACAGAGCTATTTTCTGGATATTGTTGAATAAGTC
GGTGTAATATTTCGGTGTGCCATCTTGTGAAAGTATGACGTCTTGTGTTA
CCTACGGTGTGTAGCGGCAAGCACCCGTCGACTCAACCGATGTCTCGAAG
TTTGGTTTGTGTAGCCTGTTGTTTCGTTTCGTTTCGTTTCGTTTCGTGTT
GGGATTGATAAAAATAAAAAATCGTGTTGTGCGCTTGCCTTCAGCAGCTT
TGTCTTGCACGTTTGTTGCTCCACATTTTTCCTTGCGACAACAATAAAAT
ACATATCTCGGCCCGACATGACTCGCTCTACATACCTGTAGCGCCCCTCT
CTGTCAGCACCAAAAACTACTCTGCTGCTAATGTTGGTCCCGATTTCAGC
GAGGTATCATCCCGCTGATTTCACCCACACGTGTACTCTTCGTTGCCCGC
ACGCGTACTGGGGTTGCACACCGTCAGTTTTTTTTGGCTGGTCTCGGCTT
ACTGTATCGTTTTGCTCTCCAGCAAACACGAAAAAATGTGTGTCTGCCTA
TGGCACGAGGCGCACCTTTTACGTCACCCTCTCCTCCATTGACGCTTTTG
TGCGTGCACCCCAACCTACTTCCTGTCGTCGACGACTATGGCACGTGGAC
TGCTGGCTGCTCATGCATGTACTGTGTGTTATTTACACCTCCATACGCAT
GCTGCTGCAACTGCTGTTGCCTGTATGTATGATACCGCCGTCTGGTATCC
TCCGCATCGTGTACCCCCGCCCCCCGCCCCCCCCCTCCCCCCCGCTATGT
ACTCCGAACGCCTCAATTCTACTGCCGCGCATCCGTGTACACATGCACTT
TTTTTGTTTTTTTGCCGTGCGCAAGGTGAACGGCACGCTCTTTGTGGGTT
ACGGCTCACCGTACACACACTCGCCGGATGTCACGGTGGACGCCTTAAGG
TTGGTGGCGGTTTTGTGTCGGTGTTTGGTGTTGGTGATGGTGTCGCAGGC
GGTGTTGGTGTTGGAGAGGGTGTTGAAATTTTTTGTTGTTGCTTCACTCT
CGCCAGAGTATCACGGTGGGCGTGTCAGGGTTCACGGTAGTTGTTGTGTT
GGTGTTGGGGTGTTGCTGGTGGTGATGCTGCTGTCGACATGATCTTGCCG
TTTCACACTCTCCGGATGTTACCGTGGACGCTTCGAGGTTTGTGGTGGTT
GGTGTTGGATGCCGGTGTTGTTGCTGCTACTGCTGGTGTTGCTGTTGCTG
TATCTGTATCTGTTGCTGGTGTTTCTGCTGTTCTTGTTGCCGCTACTGCC
GCTGCTGTTGTTGCTGCTCCCTCCTCGACTGGAAACTCGACTCCTGTTCC
CATTCCTGCAGAAACAAGACAACACAGCACGCTTCTCTCTCTCTCTCTCT
CTCTCTCTCTCTCTTTCTCTATCTCTCCCCCTCTCTCTCATCCTGAAATC
GTTCATTTCCGTGCATGCACACGCACACGCAGAGTTCTGGACCTGGGTGG
TGGCAGCGCGGAAGAGGTCGTAAACCCTGTCACTGGATTCGCCCACTCCT
CGTAAGTTTCAGTAGTTGTCGTCGTCGTTGCTTGATTCGCCAACTCCTCG
TCAGTCACCGCTGCCGTTGTCGCCATTTATTGCTACGCTTCTCGCGATAA
AAACTTTTAGGCAAGCACCTCAGGAGGGAGATACCGTTGTAAGGGAAAAA
ATCAAACAAAATTTGTTGGCCTTTCTCCTGAGTGTGATCAAGCCCCCCTG
GCGCGCTCTAACGAAGTAACTTCCGGAGAGGTGCACCCGTCGCCCAATAA
TGATGGGTTGGCAACACGCACACACTCCGGTTTGTACCTTTTTTTGACGA
GCTTTGGAGGATGGGAGGAACACCTAACGCCTGCCTTCGCATTCGTTTTA
TCACAGTGAAGTGAATCGGGGGTACCAGGAACACCCCCGCATTCTCGTGA
CTCCCGATTTTACCACACACCAAGTAGGATCATAGTGCATGTATTGCAGG
GATTTGCCTTCGCTTTTCTTTATTGTGGTGGTGTGGTGGGATGAAAGCCC
AACAACTACCGACCGTACCGTGTTACCGTGTTACGACGGTGAAAACGCAG
GAATCTTTCTGTGGGAATAAACGGTGTTGGCACATATCATATCGCGGCAG
CGTTTTCCGCTCGTTGTCGCGAGTCCCAAAGGTGTACTCCTATGTTTACT
GCTGTCCTCGTATCGCTGCTGAACGGGTGGAAATTCGTTGGTACGTTCAT
TTACTTGTTTTAAAATGCATTGATGTGGAAGAGAATCCCTTCATAGGGGG
CACGAGTACATTCCCACAACGTCTGTCGAGGACGGATTCCCTCTTTTTAT
ATATATACGAAGTATACATTTATTTATTTATTTAATTCTATATTTTTGTA
TGATTTTATTTATTTACTTGTTTATTTGGAGTCATTTATTTATTTTGGCA
CATTCGCGACCTCTGCTGCTGTTGCTCGGGGCGATTGCGTCCCCTTTCTT
GGCGACAGACGCGCCAACTGTGGGAGCGGACACGAGAACCTACTCGTATT
GAATTATTGACTTTTTTTATTTATTGGTATTATTAATATTATTTTTTCCA
TTTATTTATTTATTCATTCGTTTATTTTTTTGTTTTTTTCGGCACATTCG
TGACCTCTACTGTGCCGATTGGTTTTGCCTTTGCTCGGGGCGATTGCGTC
CCCTCTCCTTCGCGACAGACGCATCAACTGTGTAGCGGTGGTGAAGGTGG
GAGCGGACACGAGGATCTACTCGGGTGATGAGCAGGGCCGGATTACCGCG
TGGGCCCGACCAACACCCGGGGTGAGCTAGAGATCGTCTGGAGGTTCGAC
TTGTTTGAGCTGCATTCGATCGTGAGCGTGTCCGCCACAGCGCATGCTTG
TTGTCTTGGTGTTGTTGTCGTTGTTGTTGTTGTTGGTGGTGGTGGTGGTG
GTGGTTGTGGTGGTGGTGGTGGTGGTGGTGGTGGTTGTGGTGGTGGTGGT
GGTTGTGGTGGTGGTGGTGGTGCTGTTGTTGTTGATGTTGGTGTTGGTGT
TGGTGTTGGTGTTGGTGTTGGTGCTGTCGCTGTTGTTGTTGTTGTTGACG
CTGTTTTCTTCAAATTGATATCCGTTTCAGCCTCAATATCCCGCGCCGTT
TCCTCACGTCTGCTCCTGTGTCTCTTTTTCGTTTGTTTCTGTTTCAGGCG
CCGTTCGCCCAGATGGCTCAACTCGACGGCCACGCGAGAGCGGTAACATC
CCTCATCTCAACGACTAGCAACGGCATGCTCTGGTCCTCCTCCGAAGACG
CCACCATCAGAATCTGGAACACCGCCACCAACACGTGCGAGCACACCATC
ACAAGTGAGGGGAGGGGAGGAAGCCGGTGTGCCTCTGTGTGCGCGTGTTT
TCTGTTTTCTGTTTTGCGTATATAGCTCACCAAGATCACCACCACCACCA
CGTTCCACTGCACCACTGCGAGACAAGACAGGAAATGGAAGATATGTTTA
CACTCAAAGTACAAAGTAAATATGTCGAAGGGTTTAGATAAACGTAGCAT
CTCGTGTAGTATTGTCGCCAACGCAACCCCCCCCCCCCAATAAAAAAAAA
TTAACACCCTTTCCTGGCCCGCCCCCAGAGCACATCCTCGCCCCCCCCCC
CGGCCCGCGTCATTGCCTTCTTCTCCTATATTTGCCGTCCCCCAGGCCAC
GTACTCCCCGTCTCCCCCTCGCCGCCCCGAAACCCTAATATCACCTCCTT
GCCGTCTTCTCCCAACCCCTTCCCCCCCAAGCCAACACCATCATCATGAA
CTCGGCTTGCCTCTCACATGACACGGCATGACATGACGTGACGTGACATG
ACATGACATGACATGACATGACATAATATCACAAGACATGACATGACATA
ACATGACACAGCATGACATAGCATGACATAACATGACATGACGTGACATG
ACGTGACATAGCGTTACATGATGGGACATGAAATGGCATGAAATGGCATA
ACATGACGTGGCATAACATGACATTACATGACGGGACATGATCTACCCAA
ACCAGAGGAAAACGGAGGGCACGAGGGGATGGTGGTCGCCCTGGCGATCG
GCCAGAGCGCCGTCGAGGGTAACCTGGCGGAGTACGTCATAAGCGGCAGC
AAGGACGGCACGATGGGCGTGTTTCAGGCGGCGGACGGGGCTCTGACCTA
CAAGCACAAGTGCGGCACAGGGGTTTCGACCATAGCGGCGTTTGATCCCA
CCCCGGGGACGAGCGCTCTCTTGCTCGTGGGCTACGAGGTGTGTGGCACT
CGCAAGACTAGTTGTTTGTTTCCGTGTTTTGGTAAGTGACATGCGTGGCC
TTGGTTTCATTCGCGTGTATTTTTTTTTTCATGTTGAGTCGAATTTTGAA
CATTTGGTGACAATCTTTCAGTATTTACTTCCAAGTGCATTTTTTTTTTT
TTTATCGTTTTGGTATGCAGTGCAGTCGTCGCACGTGTATACTCGTGTCG
AATCACGGTCGGTTTCTAGACAAAGTAGATGCGTATGGTGCAACAAACAC
CCGAAGGCTCAAGCCAGACGTCGACGAGTTTGTATTTTGCCCGTATCCCC
CCCCCCCCATCCGCCCGCTTTGGAACGCCACTACTTACCGCTTCGCGTTC
GTCTTGTGCGTGCAGGACGGTACGATCGCGGTAAGAAATTTCCCAGAGTT
TGCGCTGGCGTTCGAGCTGCACCCTGACTCCATCTACGTGGGACACTCGT
GAGTTCATTGCTGCAAATCAGGTGTTGTCGTATTTTTTTTTTTGTGGTGA
TGGTGGTAGTGGTGGTGGTGGCAATCGAGATGTCGTTGGTGTCGTTAGCA
CCGTTTTGGTGGTTGGTTGGTTGGTTGGTTAGTTGGTTGGTTGGTTGGTT
GGTTGGTTGGTTAGTTAGTTAGTTGGTTATTTGGTTGATTGAGTTGTTCG
TTCGTTCGTTCGTTCGTTGGCCGCTTCGTTGCTTGCTTGCGTGCTTGCTG
TTTGGCGGCGTAGAGTGGTGGTGTCGATGCTTTTTTGTGTCGTTGGTGTT
ATTGGTGTCGGTAGTTGTACCCGGGGGCAAGCTGGTGGAGGGCTATCGCA
TCATATTCGCTGTTTTTGTCGATTGAATGTTCGTGGGGTCGGTCTTGTTT
GTTCTCTCTTTCAACAACCCTGGCGACCGAGGGCTTCGAACAGTACCGGG
TGTGTGTTGTATCTGAAAGCTGAAAACCAGCTCAAAGAAAAAAATGGGAA
AGGCTTACACAGTGAATTGAACCCTCAAACCCCTTCCTGCCCCCCCTTCT
TACGGAAATTTTTGAACGTGTGGTACCGTCAAACACTACATACGCATCGA
AACGTACGTGTGCACATGCAGGAAAAGGGTGCACGCTCTCCTCCCGTTCA
ACAACCCGGCAATCGAGGATTGCTACTTCCTGTCGGCCGGAGAGGAGGGC
AAGATGCTCTGCTGGAAGGTGCACAAGCTCACGGATGAAGCCCCAGTAAA
GTAGAGCCTGTTTGGAACGCCGG
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Coding sequence (CDS) from alignment at P-littoralis_Contig20:517283..527455+

>mRNA_P-littoralis_Contig20.129.1 ID=mRNA_P-littoralis_Contig20.129.1|Name=mRNA_P-littoralis_Contig20.129.1|organism=Pylaiella littoralis U1_48|type=CDS|length=1170bp|location=Sequence derived from alignment at P-littoralis_Contig20:517283..527455+ (Pylaiella littoralis U1_48)
ATGGGCCGCGGGCACGGGGGCGACACCATCACCTTCAGCTTGTGCAAGTT
TTATGCTGCCGGGCACTGCGACCGTTCGGCTAGCTGCCGGCACCGACACG
CGGTCCAAAAGGTAAGCGAGGCACAGGTGTCCGCGCAGGCGGATGGGTTC
ACGGGAGCGGTTAGATCCCTGGTGCAGTGGAAGGACAAGCCGGATCACGT
GTTCTCGGCGTGCGACGATGGCACGATAAAGATGTGGTCGACTACAGACG
GATCGACCTGGGTACAAGTGACTTCGGTACAGACGCACGAGTGGCGACAC
GTCGGTGCTCTCCAGGAGGTGAACGGCACGCTCTTTGTGGGTTACGGCTC
ACCGTACACACACTCGCCGGATGTCACGGTGGACGCCTTAAGAGTTCTGG
ACCTGGGTGGTGGCAGCGCGGAAGAGGTCGTAAACCCTGTCACTGGATTC
GCCCACTCCTCACGCATCAACTGTGTAGCGGTGGTGAAGGTGGGAGCGGA
CACGAGGATCTACTCGGGTGATGAGCAGGGCCGGATTACCGCGTGGGCCC
GACCAACACCCGGGGCGCCGTTCGCCCAGATGGCTCAACTCGACGGCCAC
GCGAGAGCGGTAACATCCCTCATCTCAACGACTAGCAACGGCATGCTCTG
GTCCTCCTCCGAAGACGCCACCATCAGAATCTGGAACACCGCCACCAACA
CGTGCGAGCACACCATCACAAAGGAAAACGGAGGGCACGAGGGGATGGTG
GTCGCCCTGGCGATCGGCCAGAGCGCCGTCGAGGGTAACCTGGCGGAGTA
CGTCATAAGCGGCAGCAAGGACGGCACGATGGGCGTGTTTCAGGCGGCGG
ACGGGGCTCTGACCTACAAGCACAAGTGCGGCACAGGGGTTTCGACCATA
GCGGCGTTTGATCCCACCCCGGGGACGAGCGCTCTCTTGCTCGTGGGCTA
CGAGGACGGTACGATCGCGGTAAGAAATTTCCCAGAGTTTGCGCTGGCGT
TCGAGCTGCACCCTGACTCCATCTACGTGGGACACTCGAAAAGGGTGCAC
GCTCTCCTCCCGTTCAACAACCCGGCAATCGAGGATTGCTACTTCCTGTC
GGCCGGAGAGGAGGGCAAGATGCTCTGCTGGAAGGTGCACAAGCTCACGG
ATGAAGCCCCAGTAAAGTAG
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