mRNA_P-littoralis_Contig20.78.1 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig20.78.1 vs. uniprot
Match: D8LJP0_ECTSI (Sart3 protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LJP0_ECTSI) HSP 1 Score: 1196 bits (3093), Expect = 0.000e+0 Identity = 765/1142 (66.99%), Postives = 837/1142 (73.29%), Query Frame = 2
Query: 290 GGDGAVAPVSEAERFALLKGAVKDSPRDYTAHLSLVEYLRKERPGSLELRKARQGYPGPEAKLGWRHPRMCPRTTYSFSERFPLSPELWQEWIDDRRAAGGEDGVEDVLALFRRAFSDYQCAKLWPGYLEALEESLDEDDESGVSTMREAFELALGRVGVHPLLGGAAWRAFVRFEKEELEDAQETGAEDDEISNARERVKRLYRRQLSVPLVGNDGA--VEGAKEAFSGDDAGFEEACRAHAKASSMLVARMEHEQVIARCQKNDPGGPGTANAWETYAAMEAADGHPSRAVLVLERAESEGCCLHERLWVTHSDLLLAQMGAEDQEETLTARAVRNLPWSAELWCRRLRSLERSSESSSEFSSGEG--GAAAAFRRVWKEALGNALPSPDEYVKVLLAFCASFRRRLVSAVEGAVKEKSAPLTVTVPTAPGQXXXXXXXXXXXXXXXXGSGVALALESMRGAFDEAEAFVDKNYPGWDEGWLFIVQQRIQIEDEVIEDIADLGLDGVVVESEQARQQWGRVLRHSGKRLASWVEAVKWERRSTGDLDACRRLFVRGMKEVQDHPEAMYTSFLNFEQETGSLRDWDAANKEVFNSRAARGLLSRDLPLASRAWAGGAAAQPLHQPTQRQXXXXXXXXXXXXXXXXXXXXPGDRGSSNRRTDSNNKRSAPGSSASTVGESEDAYPGSSNNNIKKRARTGAGXXXXRDTLAXXXXXXXTGEMAGEKKGKGSQEXXXXXXXXXXXXXXXXXXXRPGEVESLTAFVINLPFSTTDAGLKGTFEACGAEVTGTRVLSDPKGRSKGLGYVTFATEEALAKALGLNGSDIDGRAISVQRSLPRGFRRGKGAARSDDSGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSGGIKWPVHPTTVFVRGLGMSATSKDLKEAFVWAGPVVEARVVQDKKTHETKGYGLVQFEEADAVEKALALDGTSMCGGTAKITRSRHPALVVAPXXXXXXXXXXXXXXAPGGVETPDGNEGAVVGGGGTRRANDWDCPGQDCDNVCFSFRTTCNRCGTGKDGTPPSKEFRQGGXXXXXXXXXAGQPVVATLHRPRLQLGAAIKPRALRNERSANGAGHKPAGTG 3703
GG GAVAP S+AE+FALLKGAVKD P DYTAHL LV++LR ERPGSLEL KARQ FSERFPL PELWQEWIDDRRAAGGEDG ED+LAL+RRAF+DYQCAKLWPGYLE LE SLDEDDE GVS MREAFE AL RVGVHP+LGGA WR+ +RFE EELEDA+E G D EI+ AR+RVKR+YRRQLSVPL+GND + +E KEAFSGDDAG +E +AHAKAS ML ARMEHEQ + RCQ+ DPGGPG ANAWE YAAMEAADGHPSRA L LERAESEGCCLHER+WVTHSDLLLAQMGA+D+EE LTARAVRNLPWSAELWCRRLRSLERSSE + SGEG GA AA RRVWKEALG++LPSPDEYVK+LLA+CASFRRRL+ AV+ VK K P TV T+ G +G+A ALE+MRGAFDEAEAFVDKNYPGWDEGWL +V++RIQIEDE++EDIADL LDGV ES QAR+QW RVLRHSGKRL SW EA+KWERRSTGDL ACRRL+ R + EVQD+PEA T++LNFE+E GSL DWDAANK VFNSRA+RGLLSRDLPLASR+WAGG AA+PLHQPTQRQXXXXXXXXXXXXXXXXXXXX XXXX XXXXXXX KGKG PG VE LT FV+NLPFS DAGL+G F+ CG EV TRVL+ P GRSKGLGYVTFA EEALAKAL L+G+D+DGR +SVQRSLPRG R KG + XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX + GIKWP HPTTVFVRGLG+SATS+DL+EAFV GP+VEARVV+DK+T ETKGYGLVQFEE +AVEKALALDGTSMCGGTA+ITRSRHPA+V APXXXXXXXXXXXXXX DG RRANDWDCP DCDNVCFSFRT CNRCG GKDGTPP KE + XX VVAT HRPRLQLGAAI+PRALRNERS NGA KP G G
Sbjct: 10 GGGGAVAPASKAEQFALLKGAVKDCPGDYTAHLFLVKHLRGERPGSLELLKARQ----------------------DFSERFPLGPELWQEWIDDRRAAGGEDGAEDILALYRRAFADYQCAKLWPGYLETLEASLDEDDEGGVSAMREAFEEALTRVGVHPVLGGAVWRSLLRFEMEELEDAEEMGVGDGEIAKARDRVKRVYRRQLSVPLIGNDESRLLEDMKEAFSGDDAGLKEVAQAHAKASKMLAARMEHEQAVKRCQEKDPGGPGEANAWEAYAAMEAADGHPSRAALALERAESEGCCLHERIWVTHSDLLLAQMGAKDEEEKLTARAVRNLPWSAELWCRRLRSLERSSEEAGG-PSGEGTAGAEAAMRRVWKEALGSSLPSPDEYVKILLAYCASFRRRLLLAVDAVVKAKPLPGTVEASTSDGARRSR-------------AGIAQALEAMRGAFDEAEAFVDKNYPGWDEGWLCVVRRRIQIEDELVEDIADLDLDGVAAES-QARRQWDRVLRHSGKRLVSWEEAIKWERRSTGDLAACRRLYARSLNEVQDYPEAACTAYLNFEEEIGSLEDWDAANKGVFNSRASRGLLSRDLPLASRSWAGGVAARPLHQPTQRQXXXXXXXXXXXXXXXXXXXXXXXX-------------------XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXADKGKG------------LPGNQAAAGGGPGGVEGLTVFVMNLPFSAADAGLRGVFQGCG-EVASTRVLTGPNGRSKGLGYVTFANEEALAKALALDGTDMDGRTLSVQRSLPRGSRSVKGGS-------------------XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEGEVVVAASGIKWPAHPTTVFVRGLGLSATSQDLREAFVGVGPMVEARVVEDKRTRETKGYGLVQFEEGEAVEKALALDGTSMCGGTAQITRSRHPAVVAAPXXXXXXXXXXXXXXXXXXXXXADGKG---------RRANDWDCPSPDCDNVCFSFRTKCNRCGMGKDGTPPPKELQX---------XXXXNSVVATQHRPRLQLGAAIRPRALRNERSTNGAARKPVGGG 1045
BLAST of mRNA_P-littoralis_Contig20.78.1 vs. uniprot
Match: A0A835Z6Q0_9STRA (RRM domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z6Q0_9STRA) HSP 1 Score: 274 bits (701), Expect = 2.450e-71 Identity = 204/617 (33.06%), Postives = 298/617 (48.30%), Query Frame = 2
Query: 341 LKGAVKDSPRDYTAHLSLVEYLRKERPGSLE-LRKARQGYPGPEAKLGWRHPRMCPRTTYSFSERFPLSPELWQEWIDDRRAAGGEDGVEDVLALFRRAFSDYQCAKLWPGYLEALEESLDEDD-----------ESGVSTMREAFELALGRVGVHPLLGGAAWRAFVRFEKEELEDAQETGAEDDEISNARERVKRLYRRQLSVPLVGNDGAVEGAKEAFSGDDAGFEEACRAHAKASSMLVARMEHEQVIARCQKNDPGGPGTANA-WETYAAMEAADGH-PSRAVLVLERAESEG-CCLHERLWVTHSDLLLAQMGAED-----------------QEETLTARAVRNLPWSAELWCRRLRSLERSSESSSEFSSGEGGAAAAFRRVWKEALGNALPSPDE-YVKVLLAFCASFRRRLVSAVEGAVKEKSAPLTVTVPTAPGQXXXXXXXXXXXXXXXXGSGVALALESMRGAFDEAEAFVDKNYPGWDEGWLFIVQQRIQIEDEVIEDIADLGLDGVVVESE-----QARQQWGRVLRHSGKRLASWVEAVKWERRSTGDLDACRRLFVRGMKEVQDHP-EAMYTSFLNFEQETG-SLRDWDAANKEVFNSRA 2071
L AVK +PR Y AHL+LV+ LR E LR+AR+ +F++ FPLSPELW +WI D +A GG DV AL+ RAF DYQCA LWPGYLE L+E D +D E + +R+A E AL VGVHP +G W A+ FE++EL+D +ETGA +DE++ R R+ L RQL+VPL GN+ ++ A A S D A+ A E +++ ++ + G A A W Y E A+ P+RA + ERA SEG CCL + W ++DLLL + A+ QE + RAVRN+PWS+ LWCR LRS ER + + EG +A + ++AL + P+P++ ++++L+A C RR + +A A + P P Q V A++ MR AF EA F++ YP W+EGWL ++ +++ E ++++ + +A+Q W + + A+W+ W R G ACR L R + + P +A+ + L FE +T SL +WD V RA
Sbjct: 49 LHKAVKANPRSYDAHLTLVQTLRTAGVEHREALRQARE----------------------TFAKAFPLSPELWADWIADEKAGGGN--AADVKALYERAFKDYQCAALWPGYLELLDEMSDNEDLAAMEQGQAPEELSETELRQAHEAALTAVGVHPTVGPQVWAAYRTFEQDELQDLEETGASEDELAAVRTRIMALLSRQLTVPLPGNETVLQLAV-ALSQD------------LAADAASAEKEAKRLREAHRRTEAGDASLALARWLEYCEFERAEERQPARAQFLYERALSEGGCCLFDTAWERYADLLLCDLKAKTXXXXXXXXXXXXXXXXAQELQVMRRAVRNVPWSSSLWCRLLRSEERCTPDA------EGRVSAVLAVLGEQALPSTFPTPEQDHLRLLMAGCDVARRAVAAATASAADVR--------PQHPSQMTKDKAATL----------VKDAVQRMREAFIEALGFLEHRYPRWEEGWLALLAYKVETEMQLVKPXXXXXXXXXXXXTSSDLRCEAKQDWEVAVNRWRQSAAAWLSYAAWLRTQPGGAAACRALLRRALTALSGEPLQAVCAAALEFESQTSASLDEWDDTYSRVRQRRA 604
BLAST of mRNA_P-littoralis_Contig20.78.1 vs. uniprot
Match: UPI000A2A8923 (squamous cell carcinoma antigen recognized by T-cells 3 n=1 Tax=Exaiptasia diaphana TaxID=2652724 RepID=UPI000A2A8923) HSP 1 Score: 162 bits (411), Expect = 6.350e-37 Identity = 142/576 (24.65%), Postives = 252/576 (43.75%), Query Frame = 2
Query: 353 VKDSPRDYTAHLSLVEYLRKERPGSLE-LRKARQGYPGPEAKLGWRHPRMCPRTTYSFSERFPLSPELWQEWI-DDRRAAGGEDGVEDVLALFRRAFSDYQCAKLWPGYLEALEESLDEDDESGVSTMREAFELALGRVGVHPLLGGAAWRAFVRFEK------EELEDAQETGAEDDEISNARERVKRLYRRQLSVPLVGNDGAVEGAKEAFSGDDAGFEEACRAHAKASSMLVARMEHEQVIARCQKNDPGGPGTANAWETYAAMEAADGHPSRAVLVLERAESEGCCLHERLWVTHSDLLLAQMGAEDQEETLTARAVRNLPWSAELWCRRLRSLERSSESSSEFSSGEGGAAAAFRRVWKEALGNALP----SPDEYVKVLLAFCASFRRRLVSAVEGAVKEKSAPLTVTVPTAPGQXXXXXXXXXXXXXXXXGSGVALALESMRGAFDEAEAFVDKNYPGWDEGWLFIVQQRIQIEDEVIEDIADLGLDGVVVESEQARQQWGRVLRHSGKRLASWVEAVKWERRSTGDLDACRRLFVRGMKEVQDHPEAMYTSFLNFEQETGSLRDWDAA 2044
V+ +P Y +HL L++ +R G L+ LR+ RQ + S+ FPL+ ELW EWI D+ A + + +L+LF DYQ KLW Y + + ++++ DD G+S +R+ FE A+ G+H G + W + FE E++ + +++I + +ERVK L+RRQ+++PL+G G + ++ ++ E +AHAKA + L + +E +A + P + +Y E G P+R + ERA E C + + LW+ ++ L ++ + RA+RN PW + LW +++LERS A KE L AL + +Y+++ +C+ RR++ + +P V +++R F A +++ + + + + +IE + DI E+A++ W +V+ + L W+E R S L CR++ R ++ D+PE + L+FE E G+L +WDA+
Sbjct: 40 VQANPYKYDSHLQLIKLVRAS--GDLDKLREIRQ----------------------NMSKIFPLTEELWLEWIKDELPLACLPEHRKMILSLFEHGVKDYQSVKLWIEYCQFIMDNMEGDD--GLSNVRDVFEKAIVAAGLHVTEGSSIWDGYRDFEMAILDSFEQMLTDENKNTMEEKIESQKERVKSLFRRQVAIPLLGMQGTMRDFEDWVEDEEEIPEAVEQAHAKALAKLEEIIPYEDTVASAE------PPKLTEYRSYLEYEVKKGDPARIQCLYERAIKENCLVGD-LWIEYTGYLDTKLKMSSVVLPVYERALRNCPWVSVLWQNYMKALERSK---------------AKETTMKETLDKALTCGFTNAQDYLQLWHCYCSFLRRQI---------QNWSPDNEQV------------------------------KALREGFQSAIDYIEHYFGKDGDSTNLLRRYWARIEAFKMNDI------------EEAQKLWEKVMTGHARELEYWLEYANLAR-SCRSLSLCRKILQRAVQSASDNPEGATQALLSFEDEEGTLDEWDAS 515
BLAST of mRNA_P-littoralis_Contig20.78.1 vs. uniprot
Match: A0A8B7YUR8_ACAPL (LOW QUALITY PROTEIN: squamous cell carcinoma antigen recognized by T-cells 3-like n=1 Tax=Acanthaster planci TaxID=133434 RepID=A0A8B7YUR8_ACAPL) HSP 1 Score: 159 bits (403), Expect = 7.190e-36 Identity = 152/575 (26.43%), Postives = 238/575 (41.39%), Query Frame = 2
Query: 341 LKGAVKDSPRDYTAHLSLVEYLRKERPGSLELRKARQGYPGPEAKLGWRHPRMCPRTTYSFSERFPLSPELWQEWIDDRRAAGGEDGVEDVLALFRRAFSDYQCAKLWPGYLEALEESLDEDDESGVSTMREAFELALGRVGVHPLLGGAAWRAFVRFEKEELEDAQETGAEDDEISNARERVKRLYRRQLSVPLVGNDGAVEGAKEAFSGDDAGFEEACRAHAKASSMLVARMEHEQVIARCQKNDPGGPGTANAWETYAAMEAADGHPSRAVLVLERAESEGCCLHERLWVTHSDLLLAQMGAEDQEETLTARAVRNLPWSAELWCRRLRSLERSSESSSEFSSGEGGAAAAFRRVWKEALGNALPSPDEYVKVLLAFCASFRRRLVSAVEGAVKEKSAPLTVTVPTAPGQXXXXXXXXXXXXXXXXGSGVALALESMRGAFDEAEAFVDKNYPGWDEGWLFIVQQ-RIQIEDEVIEDIADLGLDGVVVESEQARQQWGRV--LRHSGKRLASWVEAVKWERRSTGDLDACRRLFVRGMKEVQDHPEAMYTSFLNFEQETGSLRDWDAANKEV 2056
L+ V +P +Y H+ L++ LR R G + R+C S+ FPL+ ELW WI D+ A DG E+V LF RA DY +W Y + + + G+ R FE A+ VG+H G W + FE L + Q ERV ++RRQLSVPL+ + + + S + E +A+ KA + L R HEQ + + + P ++ Y E +G+P+R + ERA ++ C L LW ++ L +++ + + ARAVRN PWS+ELW L ++ER E S + +++ALG S EY+++ RRR+ GS L +R ++A + Y G D + +QQ ++E + ++ E AR QW + L H+ + W+E V ER S GD CR++ R + V D+PE ++ + +NFE+E G+ W+ A K V
Sbjct: 54 LESQVSSNPYEYNGHIELIKLLR--RAGEWD--------------------RLC-HAYQRMSDLFPLTAELWLGWIKDQSACTRLDGREEVYKLFERAVMDYVSPDVWLEYGQFSIGGIGTPE--GIEKARSVFERAIAAVGLHVTRGSEVWEVYREFENALLRNWQT------------ERVSAIFRRQLSVPLMDMEDTYKEYESWLS--EPVSENVRKAYEKAFAQLKKREPHEQQLLKAE------PPVFAVYQPYLEYERREGNPARIQCLYERALTDNC-LQIELWKDYTKYLDSELKVKSVVLPVYARAVRNCPWSSELWIGYLVTMERYQEPHST-------------KPFEKALGAGFSSASEYLQLWQTHIDYLRRRI---------------------------------------DWGSEHEEELSQLRATLEKAGEHL-ATYFGVDGDPVRSLQQYSARMEAKHCGNM------------EAARSQWNEIMALGHANE-AQMWLEYVNLER-SYGDAKHCRKILHRAVAAVSDYPECLFEALINFEREEGTFETWENALKRV 515
BLAST of mRNA_P-littoralis_Contig20.78.1 vs. uniprot
Match: A0A8D0BQR5_9SAUR (Spliceosome associated factor 3, U4/U6 recycling protein n=1 Tax=Salvator merianae TaxID=96440 RepID=A0A8D0BQR5_9SAUR) HSP 1 Score: 157 bits (397), Expect = 3.760e-35 Identity = 154/580 (26.55%), Postives = 245/580 (42.24%), Query Frame = 2
Query: 371 DYTAHLSLVEYLRKERPGSL-ELRKARQGYPGPEAKLGWRHPRMCPRTTYSFSERFPLSPELWQEWIDDR-RAAGGEDGVEDVLALFRRAFSDYQCAKLWPGYLEALEESLDEDDESGVSTMREAFELALGRVGVHPLLGGAAWRAFVRFEKEELEDAQETG-----AEDDEISNAR-ERVKRLYRRQLSVPLVGNDGAVEGAKEAFSGDDAGFEEACRAHAKASSMLVARMEHEQVIARCQKNDPGGPGTANAWETYAAMEAADGHPSRAVLVLERAESEGCCLHERLWVTHSDLLLAQMGAEDQEETLTARAVRNLPWSAELWCRRLRSLERSSESSSEFSSGEGGAAAAFRRVWKEALGNALPSPDEYVKVLLAFCASFRRRLVSAVEGAVKEKSAPLTVTVPTAPGQXXXXXXXXXXXXXXXXGSGVALALESMRGAFDEAEAF----VDKNYPGWDEGWLFIVQQRIQIEDEVIEDIADLGLDGVVVESEQARQQWGRVLRHSGKRLAS-WVEAVKWERRSTGDLDACRRLFVRGMKEVQDHPEAMYTSFLNFEQETGSLRDWDAANKEVFNSRA 2071
DY HL L++ L +E G L +LR+ARQ SE FPL+ E+W +W+ D R A E + LF RA DY C +LW Y + + + E G+ +R FE AL VG+H G A W A+ FE LE Q G AE + ++A+ E++ L+RRQLS+PL+ D A+ ++ EE + + KAS + +E+ + + P A ++ Y E G P+R L+ ERA ++ C + + LW+ ++ L Q+ ++ + RAVRN PW+ LW L +LER ++ AL +YV++ A+ RRR V + + KE LE +R AF A + V++ + + I+Q +IE + ++ ++AR+ W ++ + A+ W+E ER + GD CR+ R ++ D+PE + L E+ G+L DWDAA ++ N A
Sbjct: 66 DYNCHLDLIKLLHQE--GELVKLRRARQ----------------------KMSELFPLTEEIWLDWLKDEIRMASENSEREKIYELFERAVKDYICPELWLEYAQYSIGGIGQ--EGGIENVRSVFERALTAVGLHVSKGAAIWEAYREFENAILETMQPAGGSISSAERQQATSAQLEKIXTLFRRQLSIPLL--DMETTYAEYEEWSEEPVPEEVIKNYKKASQQMEKYKPYEEALLVAET-----PKLAE-YQAYIDFEMKAGDPARIQLIYERALADNCLVPD-LWLRYTQYLDRQLKVKELVLSAHERAVRNCPWTVRLWNHYLLALERHHVEHQ-----------LIAETFENALNAGFIQATDYVEIWQAYLDYLRRR-VDFTQDSSKE--------------------------------------LEDLRSAFAHAVEYLKQEVEERFSESGDPSCTIMQTWARIEARLCNNM------------QKARELWDHIMTKGNAKYANMWLEYYNLER-AHGDTQHCRKALHRAVQCTSDYPEHVCEVLLMLERIEGTLEDWDAAVQKTENRLA 547
BLAST of mRNA_P-littoralis_Contig20.78.1 vs. uniprot
Match: A0A646QC13_9MYRI (Squamous cell carcinoma antigen recognized by T-cells 3 n=1 Tax=Hemiscolopendra marginata TaxID=943146 RepID=A0A646QC13_9MYRI) HSP 1 Score: 156 bits (394), Expect = 7.960e-35 Identity = 147/589 (24.96%), Postives = 245/589 (41.60%), Query Frame = 2
Query: 326 ERFALLKGAVKDSPRDYTAHLSLVEYLRKERPGSLELRKARQGYPGPEAKLGWRHPRMCPRTTYSFSERFPLSPELWQEWIDDRRAAGGEDGVEDVLA-LFRRAFSDYQCAKLWPGYLEALEESLDEDD-ESGVSTMREAFELALGRVGVHPLLGGAAWRAFVRFEKEELEDAQETGAEDD----EISNARERVKRLYRRQLSVPLVGNDGAVEGAKEAFSGDDAGFEEACRA-HAKASSMLVARMEHEQVIARCQKNDPGGPGTANAWETYAAMEAADGHPSRAVLVLERAESEGCCLHERLWVTHSDLLLAQMGAEDQEETLTARAVRNLPWSAELWCRRLRSLERSSESSSEFSSGEGGAAAAFRRVWKEALGNALPSPDEYVKVLLAFCASFRRRLVSAVEGAVKEKSAPLTVTVPTAPGQXXXXXXXXXXXXXXXXGSGVALALESMRGAFDEAEAFVDKNYPGWDEGWLFIVQQRIQIEDEVIEDIADLGLDGVVVESEQARQQWGRVLRHSGKRLAS-WVEAVKWERRSTGDLDACRRLFVRGMKEVQDHPEAMYTSFLNFEQETGSLRDWDAANKEVFNSR 2068
+R + L+ +K +P Y H+ L++ L+KE G LE +A + Y S+ FPL+ +LW +WI D + D+++ LF RA DY ++W LE + S+ D ++GV+ +R FE A+ VG+H + G W A+ FE L Q G E D EI R+R+ L++RQLS+PL+ + E E G + + R + KA + L HE + ++ A+E Y E + P+R + ERA E C + LW ++D L +++ + + RAVRN PWS ELW + ++ER + + + + ALG + E+ ++ + + RRR+ + E + K T + GS + + EA+ KN +E+ R+ W ++ R A W+E ER GD RRL+ + ++ V + PE + +++NFE++ GSL W+AA + +N+R
Sbjct: 35 QRISYLQDQIKTNPYCYDPHVELIKLLKKE--GELEQLRAAREY---------------------MSKIFPLTEDLWLDWIRDEEKLATSEAERDIVSKLFERAILDYMSVEIW---LEYAQYSIGRMDMKNGVNNIRSIFEKAITAVGLHVVKGSIIWEAYREFENAMLITMQPKGEEGDSDTEEIQQQRQRIINLFKRQLSIPLIDMEKTFEELHEWLEGKE--LDSTIRPLYEKALAKLRKLRPHEDELLSSSRH------RLAAFEDYIIYELKENEPARIQCIFERALVENCLIPS-LWKRYTDYLESKLKIDSVSLPVFERAVRNCPWSVELWENYILAMERHKQPHEK-----------VKELVDRALGAGFTTAPEFRQLWIIYLDYLRRRIDWSKEHKTELKELQSTFL------RAHNHLVECFGKDADPTGS--------ILRYWARIEAYYCKN-------------------------------------AEKMRELWNEIMMLGNSRKAEHWLEYANLER-ICGDSQHLRRLYQKALQVVDNWPEMIGEAWINFERDEGSLEQWEAAGAK-YNAR 524
BLAST of mRNA_P-littoralis_Contig20.78.1 vs. uniprot
Match: A0A852KD14_UROIN (SART3 protein (Fragment) n=2 Tax=Coliidae TaxID=57385 RepID=A0A852KD14_UROIN) HSP 1 Score: 155 bits (392), Expect = 1.460e-34 Identity = 151/580 (26.03%), Postives = 243/580 (41.90%), Query Frame = 2
Query: 371 DYTAHLSLVEYLRKERPGSL-ELRKARQGYPGPEAKLGWRHPRMCPRTTYSFSERFPLSPELWQEWIDDRRAAGGEDGV-EDVLALFRRAFSDYQCAKLWPGYLEALEESLDEDDESGVSTMREAFELALGRVGVHPLLGGAAWRAFVRFEKEELEDAQETGA------EDDEISNARERVKRLYRRQLSVPLVGNDGAVEGAKEAFSGDDAGFEEACRAHAKASSMLVARMEHEQVIARCQKNDPGGPGTANAWETYAAMEAADGHPSRAVLVLERAESEGCCLHERLWVTHSDLLLAQMGAEDQEETLTARAVRNLPWSAELWCRRLRSLERSSESSSEFSSGEGGAAAAFRRVWKEALGNALPSPDEYVKVLLAFCASFRRRLVSAVEGAVKEKSAPLTVTVPTAPGQXXXXXXXXXXXXXXXXGSGVALALESMRGAFDEAEAF----VDKNYPGWDEGWLFIVQQRIQIEDEVIEDIADLGLDGVVVESEQARQQWGRVLRHSGKRLAS-WVEAVKWERRSTGDLDACRRLFVRGMKEVQDHPEAMYTSFLNFEQETGSLRDWDAANKEVFNSRA 2071
DY HL L++ LR+E G L +LR+ARQ SE FPL+ E+W +W+ D E E V LF RA DY C ++W Y + + + E G+ +R FE AL VG+H G A W A+ FE LE AQ + + + E++ L+RRQL +PL+ + + +E ++ E + + KA L +E+ + + P A ++ Y E G P+R L+ ERA +E C + + LW ++ L Q+ +D + RAVRN PW+ LW R L ++ER S S ++++AL +YV++ A+ RRR V + + KE LE +R AF A + V++ + + I+Q ++E + ++ ++AR+ W ++ + A+ W+E ER + GD CR+ R ++ D+PE + L E+ G+L DWDAA ++ N A
Sbjct: 69 DYNCHLDLIKLLRQE--GELVKLRRARQ----------------------KMSELFPLTEEIWLDWLKDEMKMAVESSEREKVYELFERAVRDYICPEIWLEYAQYSIGGIGQ--EGGIERVRSIFERALTAVGLHVTKGTALWEAYREFENAILETAQPAPGSVPSPEQQQMLCSQLEKIHTLFRRQLGIPLLDMEASYAEYEE--WSEEPIPETIIKNYKKALQQLEKCKPYEEALLSAET-----PKLAE-YQAYIDFETKAGDPARIQLIYERALAENCLVPD-LWARYNQYLDRQLKVKDLVLSAHDRAVRNCPWTVGLWIRYLLAMERHRVDHSVIS-----------EMFEKALNAGFIQATDYVEIWQAYLDYLRRR-VDFTQDSSKE--------------------------------------LEELRSAFARAVEYLKQEVEERFSESGDPSCTIMQNWARVEARLCNNM------------QKARELWDNIMTKGNAKYANMWLEYYNLER-AHGDTQHCRKALHRAVQCTSDYPEHVCEVLLTLERIEGTLEDWDAAVQKTENRLA 550
BLAST of mRNA_P-littoralis_Contig20.78.1 vs. uniprot
Match: A0A2D0PNJ9_ICTPU (squamous cell carcinoma antigen recognized by T-cells 3 n=5 Tax=Siluroidei TaxID=1489793 RepID=A0A2D0PNJ9_ICTPU) HSP 1 Score: 155 bits (391), Expect = 1.960e-34 Identity = 155/572 (27.10%), Postives = 240/572 (41.96%), Query Frame = 2
Query: 371 DYTAHLSLVEYLRKERPGSL-ELRKARQGYPGPEAKLGWRHPRMCPRTTYSFSERFPLSPELWQEWIDDR--RAAGGEDGVEDVLALFRRAFSDYQCAKLWPGYLEALEESLDEDDESGVSTMREAFELALGRVGVHPLLGGAAWRAFVRFEKEELEDAQE-----TGAEDDEISNAR-ERVKRLYRRQLSVPLVGNDGAVEGAKEAFSGDDAGFEEACRAHAK-ASSMLVARMEHEQVIARCQKNDPGGPGTANAWETYAAMEAADGHPSRAVLVLERAESEGCCLHERLWVTHSDLLLAQMGAEDQEETLTARAVRNLPWSAELWCRRLRSLERSSESSSEFSSGEGGAAAAFRRVWKEALGNALPSPDEYVKVLLAFCASFRRRLVSAVEGAVKEKSAPLTVTVPTAPGQXXXXXXXXXXXXXXXXGSGVALALESMRGAFDEAEAFVDKNYPGWDEGWLFIVQQRIQIEDEVIEDIADLG--LDGVVVESEQ-ARQQWGRVLRHSGKRLAS-WVEAVKWERRSTGDLDACRRLFVRGMKEVQDHPEAMYTSFLNFEQETGSLRDWDAA 2044
DY H+ L++ LR+E G L LRKARQ SE FPL+ E+W +W+ D G E E + LF +A +DY C +W Y + + G++ +R FE AL VG+H G A W AF FE L Q + E E NA+ ER+ L+RRQL++PL+ + E D G E H K A L +R +E+ + + P +++Y E DG P+R ++ ERA E C + + LW ++ L Q+ +D + RAVRN PW+ LW L +LER S V+++AL +YV++ ++ RRR+ + EG+ + LE +R AF A ++ ++ V++R ++ I + ++ + ++ Q AR+ W ++ + A+ W+E ER S GD CR+ R ++ D+PE + L FE+ GSL DWDAA
Sbjct: 76 DYNCHVDLIKLLRQE--GKLYRLRKARQ----------------------KMSELFPLTEEIWLDWLKDEIGLVEGDEAEREKIYELFEKAVTDYICPDIWLEYAQYSIGGMGA--AGGIARVRTTFERALTAVGLHMTKGAALWEAFREFEIAILSTLQPPPGSVSSLEQQEQVNAQLERIHTLFRRQLAIPLMDMESTYT---EYSDWTDEGVPETVTQHYKRALQQLESRRPYEEALLVSE------PPKMAEYQSYIEYEIKDGDPARVQIIFERALGENCLVPD-LWAKYTIYLDRQLKIKDLVLSCHERAVRNCPWTMGLWKSYLLALERHCAEHHIVSD-----------VFEKALNAGFIQATDYVEIWQSYLDYLRRRVDFSKEGSRE---------------------------------------LEELRAAFTRALDYLKQD-----------VEERFTESGDLSCTIMQIWARIEALHCKNMQKARELWDHIMTKGNAKYANMWLEYYNLER-SYGDAAHCRKALHRAVQCTSDYPEHVCEVLLAFERVEGSLEDWDAA 549
BLAST of mRNA_P-littoralis_Contig20.78.1 vs. uniprot
Match: A0A851FFY6_PITSO (SART3 protein (Fragment) n=3 Tax=Neognathae TaxID=8825 RepID=A0A851FFY6_PITSO) HSP 1 Score: 154 bits (389), Expect = 3.340e-34 Identity = 150/580 (25.86%), Postives = 244/580 (42.07%), Query Frame = 2
Query: 371 DYTAHLSLVEYLRKERPGSL-ELRKARQGYPGPEAKLGWRHPRMCPRTTYSFSERFPLSPELWQEWIDDRRAAGGEDGV-EDVLALFRRAFSDYQCAKLWPGYLEALEESLDEDDESGVSTMREAFELALGRVGVHPLLGGAAWRAFVRFEKEELEDAQETGA------EDDEISNARERVKRLYRRQLSVPLVGNDGAVEGAKEAFSGDDAGFEEACRAHAKASSMLVARMEHEQVIARCQKNDPGGPGTANAWETYAAMEAADGHPSRAVLVLERAESEGCCLHERLWVTHSDLLLAQMGAEDQEETLTARAVRNLPWSAELWCRRLRSLERSSESSSEFSSGEGGAAAAFRRVWKEALGNALPSPDEYVKVLLAFCASFRRRLVSAVEGAVKEKSAPLTVTVPTAPGQXXXXXXXXXXXXXXXXGSGVALALESMRGAFDEAEAF----VDKNYPGWDEGWLFIVQQRIQIEDEVIEDIADLGLDGVVVESEQARQQWGRVLRHSGKRLAS-WVEAVKWERRSTGDLDACRRLFVRGMKEVQDHPEAMYTSFLNFEQETGSLRDWDAANKEVFNSRA 2071
DY HL L++ LR+E G L +LR+ARQ SE FPL+ E+W +W+ D E E V LF RA DY C ++W Y + L + E G+ +R FE AL VG+H G A W A+ FE LE AQ + + + +++ L+RRQL +PL+ + + +E ++ E +++ KA L +E+ + + P A ++ Y E G P+R L+ ERA +E C + + LW ++ L Q+ ++ + RAVRN PW+ LW R L ++ER S S ++++AL +YV++ A+ RRR V + + KE LE +R AF A + V++ + + I+Q ++E + ++ ++AR+ W ++ + A+ W+E ER + GD CR+ R ++ D+PE + L E+ G+L DWDAA ++ N A
Sbjct: 73 DYNCHLDLIKLLRQE--GELVKLRRARQ----------------------KMSELFPLTEEIWLDWLKDEMKMASESCEREKVYELFERAVKDYICPEIWLEYAQYSIGGLGQ--EGGIERVRSIFERALTAVGLHVTKGTALWEAYREFENAILETAQPAPGTVPSPEQQQVLCSQLDKIHTLFRRQLGIPLLDMEASYAEYEE--WSEEPIPETTVKSYKKALQELERCKPYEEALLGAET-----PKLAE-YQAYIDFEMKAGDPARIQLIFERALAENCLVPD-LWARYNQYLDRQLKVKELVLSAHDRAVRNCPWTVGLWIRYLLAMERHRLEHSTIS-----------EMFEKALNAGFIQATDYVEIWQAYLDYLRRR-VDFTQDSSKE--------------------------------------LEELRSAFARAVEYLKQEVEERFSESGDPSCTIMQNWARVEARLCNNM------------QKARELWDNIMTKGNAKYANMWLEYYNLER-AHGDTQHCRKALHRAVQCTSDYPEHVCEVLLTLERIEGTLEDWDAAVQKTENRLA 554
BLAST of mRNA_P-littoralis_Contig20.78.1 vs. uniprot
Match: A0A151NS24_ALLMI (Squamous cell carcinoma antigen recognized by T-cells 3 n=7 Tax=Crocodylia TaxID=1294634 RepID=A0A151NS24_ALLMI) HSP 1 Score: 153 bits (386), Expect = 8.180e-34 Identity = 153/580 (26.38%), Postives = 241/580 (41.55%), Query Frame = 2
Query: 371 DYTAHLSLVEYLRKERPGSL-ELRKARQGYPGPEAKLGWRHPRMCPRTTYSFSERFPLSPELWQEWIDDR-RAAGGEDGVEDVLALFRRAFSDYQCAKLWPGYLEALEESLDEDDESGVSTMREAFELALGRVGVHPLLGGAAWRAFVRFEKEELEDAQE------TGAEDDEISNARERVKRLYRRQLSVPLVGNDGAVEGAKEAFSGDDAGFEEACRAHAKASSMLVARMEHEQVIARCQKNDPGGPGTANAWETYAAMEAADGHPSRAVLVLERAESEGCCLHERLWVTHSDLLLAQMGAEDQEETLTARAVRNLPWSAELWCRRLRSLERSSESSSEFSSGEGGAAAAFRRVWKEALGNALPSPDEYVKVLLAFCASFRRRLVSAVEGAVKEKSAPLTVTVPTAPGQXXXXXXXXXXXXXXXXGSGVALALESMRGAFDEAEAF----VDKNYPGWDEGWLFIVQQRIQIEDEVIEDIADLGLDGVVVESEQARQQWGRVLRHSGKRLAS-WVEAVKWERRSTGDLDACRRLFVRGMKEVQDHPEAMYTSFLNFEQETGSLRDWDAANKEVFNSRA 2071
DY HL L++ LR+E G L +LR+ARQ SE FPL+ E+W +W+ D R A E V LF RA DY C ++W Y + + E G+ +R FE AL VG+H G A W A+ FE LE AQ T + + E++ L+RRQL +PL+ D A+ +D E + + KA L +E+ + + P A ++ Y E G P+R L+ ERA +E C + + LW ++ L Q+ ++ + RAVRN PW+ LW R L ++ER S ++++AL +YV++ A+ RRR V + + KE LE +R AF A + V++ + + I+Q ++E + ++ ++AR+ W ++ + A+ W+E ER + GD CR+ R ++ D+PE + L E+ G+L DWDAA ++ N A
Sbjct: 91 DYNCHLDLIKLLRQE--GELVKLRRARQ----------------------KMSELFPLTEEIWLDWLKDEIRMASENADREKVYDLFERAVKDYICPEIWLEYAQYSIGGIGL--EGGIERVRSVFERALTAVGLHVTKGAAIWEAYREFENAILETAQPAPGSIPTPEQQQTLREQLEKIHTLFRRQLGIPLL--DMETTYAEYEEWSEDPIPEAVIKNYKKALQQLEKCRPYEEALLVAET-----PKLAE-YQAYIDFEMKVGDPARIQLIYERALAENCLVPD-LWARYNQYLDRQLKVKELVLSAHDRAVRNCPWTVGLWIRYLLAMERHRVGHRTISD-----------IFEKALNAGFIQAMDYVEIWQAYLDYLRRR-VDFTQDSSKE--------------------------------------LEELRSAFARAVEYLKQEVEERFSESGDPSCTIMQNWARVEARLCNNM------------QKARELWDSIMTKGNAKYANMWLEYYNLER-AHGDTQHCRKALHRAVQCTSDYPEHVCDVLLTLERIEGTLEDWDAAVQKTENRLA 572 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig20.78.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig20.78.1 >prot_P-littoralis_Contig20.78.1 ID=prot_P-littoralis_Contig20.78.1|Name=mRNA_P-littoralis_Contig20.78.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=1237bp MPKTSRTPCCTATDAAAESSGTHSHQRTPHPHAASKERKTMEVDGEGSGGback to top mRNA from alignment at P-littoralis_Contig20:300000..321954+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig20.78.1 ID=mRNA_P-littoralis_Contig20.78.1|Name=mRNA_P-littoralis_Contig20.78.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=21955bp|location=Sequence derived from alignment at P-littoralis_Contig20:300000..321954+ (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig20:300000..321954+ >mRNA_P-littoralis_Contig20.78.1 ID=mRNA_P-littoralis_Contig20.78.1|Name=mRNA_P-littoralis_Contig20.78.1|organism=Pylaiella littoralis U1_48|type=CDS|length=3711bp|location=Sequence derived from alignment at P-littoralis_Contig20:300000..321954+ (Pylaiella littoralis U1_48)back to top |