prot_P-littoralis_Contig20.57.1 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig20.57.1
Unique Nameprot_P-littoralis_Contig20.57.1
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length295
Homology
BLAST of mRNA_P-littoralis_Contig20.57.1 vs. uniprot
Match: D7FK72_ECTSI (Rab32L, RAB family GTPase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FK72_ECTSI)

HSP 1 Score: 461 bits (1186), Expect = 5.320e-162
Identity = 237/297 (79.80%), Postives = 260/297 (87.54%), Query Frame = 0
Query:    1 MVVSKASEGRKAKGATTTPQDGRSAGSAPPGRRLPPEREGSMARIHSRAQKFAESSPTMKSRDKMIKFMFLGDSETGKTAIVTRFATDVFNPTYNPTMDVDFTQSNVMVGEQRLRVGLWQVSEKKEGTIATNTFRGLHGAFIVADISRQETFHGVAKFRKIIDDKLAEVGATSLPVVLLANKSDRLGEDGVSLNKSSMDKLCKRHRLHGWYATSAKDNTNIDLALKGVLRQALQGGAKTAFSELMPGDVAALDAEL---NGPGADRERSPGQQMLRDHQWFGTQKVAAKQGCACVIS 294
            MVV+K S+ R+AK  + +P DG  A SAPPGRRLPPEREGSMARI+SRAQKFA+S     S   M+KFMFLGDSE GKTAIVTRFAT  F+P Y PTMDVDFTQSNVMVGEQRLRV LWQVSEKKEG++ATNTFRGLHGAFIVADI+RQETFHGVAKFR+IID+KLAEVGA SLPVVLLANKSDRLGEDGVSLNKSSMDKLCKRHRLHGWYATSAKDN+NIDLA+K VLR+ALQG A++AF EL   DV ALD EL   NGPG+DRERSPGQQ+LRDHQWFGTQ V+ KQGCACV+S
Sbjct:    1 MVVNKVSDSRRAKSTSGSPGDGLPAVSAPPGRRLPPEREGSMARINSRAQKFADSPGAKSSGTTMVKFMFLGDSECGKTAIVTRFATGTFDPVYKPTMDVDFTQSNVMVGEQRLRVALWQVSEKKEGSLATNTFRGLHGAFIVADIARQETFHGVAKFRQIIDEKLAEVGAGSLPVVLLANKSDRLGEDGVSLNKSSMDKLCKRHRLHGWYATSAKDNSNIDLAIKEVLRRALQGSARSAFGELEQDDVDALDEELTQLNGPGSDRERSPGQQILRDHQWFGTQNVSTKQGCACVVS 297          
BLAST of mRNA_P-littoralis_Contig20.57.1 vs. uniprot
Match: A0A835YX00_9STRA (P-loop containing nucleoside triphosphate hydrolase protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YX00_9STRA)

HSP 1 Score: 141 bits (355), Expect = 1.580e-36
Identity = 77/211 (36.49%), Postives = 129/211 (61.14%), Query Frame = 0
Query:   42 MARIHSRAQKFAESSPTMKSRDKMIKFMFLGDSETGKTAIVTRFATDVFNPTYNPTMDVDFTQSNVMVGEQRLRVGLWQVSEKKEGT--IATNTFRGLHGAFIVADISRQETFHGVAKFRKIIDDKLAEVGATSLPVVLLANKSDRLGEDGVSLNKSSMDKLCKRHRLHGWYATSAKDNTNIDLALKGVLRQALQGGAKTAFSELMPGDVA 250
            M R  SRA+K+   SP +      +K + LGDS TGKTA+  RFA++ F+P + PT+ VDF+Q+++ VG Q +R+ LW ++EKKEGT  +  N F+G+HGAFIV DI++  T   + +++ +ID+ +A+V                        +K+++D+LC+++++  W+ATSAK N NI+LA+K ++   L G   + F  ++ G ++
Sbjct:    1 MNRRSSRAEKY--DSPHL--GPAKLKILLLGDSATGKTAVTQRFASNRFDPAHKPTVAVDFSQTSITVGTQMVRLALWNLAEKKEGTQQVNGNHFQGVHGAFIVVDITQPHTVAKMLQWKALIDETVAQV----------------------QFSKATLDRLCEKYQVDSWFATSAKTNVNIELAMKQMVLSVLSGPYHSNFQRVLTGGLS 185          
BLAST of mRNA_P-littoralis_Contig20.57.1 vs. uniprot
Match: A0A024TU36_9STRA (Ras-related protein Rab n=6 Tax=Aphanomyces TaxID=100860 RepID=A0A024TU36_9STRA)

HSP 1 Score: 116 bits (290), Expect = 1.150e-27
Identity = 65/174 (37.36%), Postives = 98/174 (56.32%), Query Frame = 0
Query:   62 RDKMIKFMFLGDSETGKTAIVTRFATDVFNPTYNPTMDVDFTQSNVMVGEQRLRVGLWQVSEKKEGTIATNTF-RGLHGAFIVADISRQETFHGVAKFRKIIDDKLAEVGATSLPVVLLANKSDRLGEDGVSLNKSSMDKLCKRHRLHGWYATSAKDNTNIDLALKGVLRQALQ 234
            +D ++K + LGD+ TGKT+I+ R+  +VF+  +  T+ VDF    V V    LR+ LW ++ ++        + +   GA +V D+SRQ+TF  V K++K ID K+       LPVVL  NK+D  G+    ++   M+  C  H   GW+ TSAKDN NID A K ++   LQ
Sbjct:   16 QDAVVKVLVLGDAATGKTSIIKRYVHNVFSEHHKTTIGVDFALKPVTVQNTTLRLQLWDIAGQEHFRALNRVYYKDALGALVVYDLSRQDTFESVLKWKKEIDTKVELPNRKPLPVVLCGNKADLAGD----IDHEFMNDFCATHGFAGWFDTSAKDNKNIDEANKALVAAVLQ 185          
BLAST of mRNA_P-littoralis_Contig20.57.1 vs. uniprot
Match: A0A485L2U4_9STRA (Ras-related protein Rab n=2 Tax=Aphanomyces TaxID=100860 RepID=A0A485L2U4_9STRA)

HSP 1 Score: 115 bits (287), Expect = 2.720e-27
Identity = 64/174 (36.78%), Postives = 99/174 (56.90%), Query Frame = 0
Query:   62 RDKMIKFMFLGDSETGKTAIVTRFATDVFNPTYNPTMDVDFTQSNVMVGEQRLRVGLWQVSEKKEGTIATNTF-RGLHGAFIVADISRQETFHGVAKFRKIIDDKLAEVGATSLPVVLLANKSDRLGEDGVSLNKSSMDKLCKRHRLHGWYATSAKDNTNIDLALKGVLRQALQ 234
            +D ++K + LGD+ TGKT+I+ R+  +VF+  +  T+ VDF    V V    LR+ LW ++ ++        + +   GA +V D+SRQ+TF  V K++K ID K+       LPV+L  NK D  GE    +++  MD  C+ +   GW+ TSAKDN NI+ A K ++   LQ
Sbjct:   11 QDAVVKVLVLGDAATGKTSIIKRYVHNVFSEHHKTTIGVDFALKPVTVQNTTLRLQLWDIAGQEHFRALNRVYYKDALGALVVYDMSRQDTFESVLKWKKEIDTKVELPNRKPLPVILCGNKCDLAGE----VDREFMDAFCETNGFAGWFDTSAKDNKNIEEANKALVSAVLQ 180          
BLAST of mRNA_P-littoralis_Contig20.57.1 vs. uniprot
Match: A0A3B3R5J7_9TELE (Ras-related protein Rab n=2 Tax=Paramormyrops kingsleyae TaxID=1676925 RepID=A0A3B3R5J7_9TELE)

HSP 1 Score: 112 bits (281), Expect = 1.820e-26
Identity = 69/209 (33.01%), Postives = 114/209 (54.55%), Query Frame = 0
Query:   62 RDKMIKFMFLGDSETGKTAIVTRFATDVFNPTYNPTMDVDFTQSNVMVGEQR--LRVGLWQVS-EKKEGTIATNTFRGLHGAFIVADISRQETFHGVAKFRKIIDDKLAEVGATSLPVVLLANKSDRLGEDGVSLNKSSMDKLCKRHRLHGWYATSAKDNTNIDLALKGVLRQALQGGAKTAFSELMPGDVAALDAELNGPGADRERSP 267
            ++ + K + +GD   GKT+I+ R+   +F+  Y  T+ VDF    V+  + R  +R+ LW ++ +++ G +    +R   GA +V D++R  TF  V K++  +D K++      +PVVLLANKSD+   +G+S     +D  CK H   GW+ TSAK+NTNI+ A++ +++  L     T     +  DV  L A LN    +R   P
Sbjct:    3 KEHLFKVLVIGDLGVGKTSIIKRYVHQIFSQHYRATIGVDFALK-VLTWDNRTVIRLQLWDIAGQERYGNMTRVYYREAVGALLVFDVTRTSTFQAVLKWKADLDGKVSLANGKPVPVVLLANKSDQ-SREGLSSQLPKLDAFCKEHGFVGWFETSAKENTNINAAVRCLVQNILANEQSTEAG--LDLDVQVLPA-LNDVTKERSSPP 206          
BLAST of mRNA_P-littoralis_Contig20.57.1 vs. uniprot
Match: UPI001D0797D1 (ras-related protein Rab-38 isoform X2 n=1 Tax=Coccinella septempunctata TaxID=41139 RepID=UPI001D0797D1)

HSP 1 Score: 113 bits (282), Expect = 7.990e-26
Identity = 66/196 (33.67%), Postives = 106/196 (54.08%), Query Frame = 0
Query:   41 SMARIHSRAQKFAESSPTMKSRDKMIKFMFLGDSETGKTAIVTRFATDVFNPTYNPTMDVDFTQSNVMVGEQR-LRVGLWQVS-EKKEGTIATNTFRGLHGAFIVADISRQETFHGVAKFRKIIDDKLAEVGATSLPVVLLANKSDRLGEDGVSLNKSSMDKLCKRHRLHGWYATSAKDNTNIDLALKGVLRQALQ 234
            S +R     Q  + +   ++ RD + K + +GD  TGKT+I+ R+    F+  Y  T+ VDF    +   E   +R+ LW ++ +++ G +    F+   GAFIV D +R  TF  V  ++  +D K+     + +P VLLANK D+  ++G+  N   MD+ CK      W+ATSAKDN NID A K ++ + L+
Sbjct:   68 SQSRTSGHNQLSSANQTQIRRRDHLYKVLVIGDLATGKTSIIKRYVHRFFSQNYRATIGVDFALKVINWDENTVIRLQLWDIAGQERYGNMTRVYFKEAVGAFIVFDCTRMNTFESVKNWKTDLDSKVLLADGSKIPCVLLANKCDQ-PKEGIVNNSHQMDEYCKTEGFAAWFATSAKDNINIDEAAKVLIERILE 262          
BLAST of mRNA_P-littoralis_Contig20.57.1 vs. uniprot
Match: UPI001E275648 (ras-related protein Rab-32 isoform X2 n=1 Tax=Harmonia axyridis TaxID=115357 RepID=UPI001E275648)

HSP 1 Score: 113 bits (282), Expect = 8.150e-26
Identity = 67/185 (36.22%), Postives = 104/185 (56.22%), Query Frame = 0
Query:   55 SSPT---MKSRDKMIKFMFLGDSETGKTAIVTRFATDVFNPTYNPTMDVDFTQSNVMVGEQR-LRVGLWQVS-EKKEGTIATNTFRGLHGAFIVADISRQETFHGVAKFRKIIDDKLAEVGATSLPVVLLANKSDRLGEDGVSLNKSSMDKLCKRHRLHGWYATSAKDNTNIDLALKGVLRQALQ 234
            SSP    ++ RD + K + +GD  TGKT+I+ R+    F+  Y  T+ VDF    +   E   +R+ LW ++ +++ G +    F+   GAFIV D +R  TF  V  ++  +D K+     + +P VLLANK D+  ++G+  N S MD+ CK      W+ATSAKDN NID A K ++ + L+
Sbjct:   80 SSPNQIHVRRRDHLYKVLVIGDLATGKTSIIKRYVHRFFSQNYRATIGVDFALKVINWDENTVIRLQLWDIAGQERYGNMTRVYFKEAVGAFIVFDCTRVNTFESVKNWKTDLDSKVLLADGSKIPCVLLANKCDQ-PKEGIVNNNSQMDEYCKTEGFAAWFATSAKDNINIDEAAKILIEKILE 263          
BLAST of mRNA_P-littoralis_Contig20.57.1 vs. uniprot
Match: A0A397BPL7_9STRA (Ras-related protein Rab n=3 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A397BPL7_9STRA)

HSP 1 Score: 111 bits (277), Expect = 8.710e-26
Identity = 66/174 (37.93%), Postives = 98/174 (56.32%), Query Frame = 0
Query:   62 RDKMIKFMFLGDSETGKTAIVTRFATDVFNPTYNPTMDVDFTQSNVMVGEQRLRVGLWQVSEKKEGTIATNTF-RGLHGAFIVADISRQETFHGVAKFRKIIDDKLAEVGATSLPVVLLANKSDRLGEDGVSLNKSSMDKLCKRHRLHGWYATSAKDNTNIDLALKGVLRQALQ 234
            +D ++K + LGD+ TGKT+I+ R+  +VF+  +  T+ VDF    V V    LR+ LW ++ ++        + +   GA +V D+SRQ+TF  V K  K ID K+       LPVVL  NK+D  GE    ++   M+  C+ +   GW+ATSAKDN NID A K ++   LQ
Sbjct:   16 QDAVVKVLVLGDAATGKTSIIKRYVHNVFSEHHKTTIGVDFALKPVTVQNTTLRLQLWDIAGQEHFRALNRVYYKDALGALVVYDLSRQDTFESVLK--KEIDTKVELPNRKPLPVVLCGNKADLAGE----VDHEFMNDFCETNGFAGWFATSAKDNKNIDEANKALVAAVLQ 183          
BLAST of mRNA_P-littoralis_Contig20.57.1 vs. uniprot
Match: UPI001D065B66 (ras-related protein Rab-38 isoform X3 n=2 Tax=Coccinella septempunctata TaxID=41139 RepID=UPI001D065B66)

HSP 1 Score: 112 bits (279), Expect = 8.760e-26
Identity = 63/175 (36.00%), Postives = 98/175 (56.00%), Query Frame = 0
Query:   62 RDKMIKFMFLGDSETGKTAIVTRFATDVFNPTYNPTMDVDFTQSNVMVGEQR-LRVGLWQVS-EKKEGTIATNTFRGLHGAFIVADISRQETFHGVAKFRKIIDDKLAEVGATSLPVVLLANKSDRLGEDGVSLNKSSMDKLCKRHRLHGWYATSAKDNTNIDLALKGVLRQALQ 234
            RD + K + +GD  TGKT+I+ R+    F+  Y  T+ VDF    +   E   +R+ LW ++ +++ G +    F+   GAFIV D +R  TF  V  ++  +D K+     + +P VLLANK D+  ++G+  N   MD+ CK      W+ATSAKDN NID A K ++ + L+
Sbjct:   46 RDHLYKVLVIGDLATGKTSIIKRYVHRFFSQNYRATIGVDFALKVINWDENTVIRLQLWDIAGQERYGNMTRVYFKEAVGAFIVFDCTRMNTFESVKNWKTDLDSKVLLADGSKIPCVLLANKCDQ-PKEGIVNNSHQMDEYCKTEGFAAWFATSAKDNINIDEAAKVLIERILE 219          
BLAST of mRNA_P-littoralis_Contig20.57.1 vs. uniprot
Match: A0A8H7UMP0_9FUNG (Uncharacterized protein n=1 Tax=Umbelopsis vinacea TaxID=44442 RepID=A0A8H7UMP0_9FUNG)

HSP 1 Score: 117 bits (292), Expect = 1.100e-25
Identity = 66/171 (38.60%), Postives = 104/171 (60.82%), Query Frame = 0
Query:   62 RDKMIKFMFLGDSETGKTAIVTRFATDVFNPTYNPTMDVDFTQSNVMVG-EQRLRVGLWQVS-EKKEGTIATNTFRGLHGAFIVADISRQETFHGVAKFRKIIDDKLA---EVGATSLPVVLLANKSDRLGED-GVSLNKSSMDKLCKRHRLHGWYATSAKDNTNIDLALK 226
            R+ + KF+ +GD  TGKT+I+ R+  ++F+  Y  T+ VDF    +    E  +R+ LW ++ +++ G +    ++   GAF+V D++R +TF GV K++  +D K++     G  ++PVVLLANKSD +GE  G   N + MD  CK +    W+ TSAKDNTNID A +
Sbjct:  484 REYLYKFLVVGDLGTGKTSIIKRYVHNIFSMHYKSTIGVDFALKVIQWSPEIVVRLQLWDIAGQERFGNMTRVYYKEALGAFVVYDVTRPQTFEGVRKWKADLDSKISLPEAWGGGNIPVVLLANKSDLIGEGHGQHANPTEMDTFCKENGFIKWFETSAKDNTNIDEAAR 654          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig20.57.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FK72_ECTSI5.320e-16279.80Rab32L, RAB family GTPase n=1 Tax=Ectocarpus silic... [more]
A0A835YX00_9STRA1.580e-3636.49P-loop containing nucleoside triphosphate hydrolas... [more]
A0A024TU36_9STRA1.150e-2737.36Ras-related protein Rab n=6 Tax=Aphanomyces TaxID=... [more]
A0A485L2U4_9STRA2.720e-2736.78Ras-related protein Rab n=2 Tax=Aphanomyces TaxID=... [more]
A0A3B3R5J7_9TELE1.820e-2633.01Ras-related protein Rab n=2 Tax=Paramormyrops king... [more]
UPI001D0797D17.990e-2633.67ras-related protein Rab-38 isoform X2 n=1 Tax=Cocc... [more]
UPI001E2756488.150e-2636.22ras-related protein Rab-32 isoform X2 n=1 Tax=Harm... [more]
A0A397BPL7_9STRA8.710e-2637.93Ras-related protein Rab n=3 Tax=Aphanomyces astaci... [more]
UPI001D065B668.760e-2636.00ras-related protein Rab-38 isoform X3 n=2 Tax=Cocc... [more]
A0A8H7UMP0_9FUNG1.100e-2538.60Uncharacterized protein n=1 Tax=Umbelopsis vinacea... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePRINTSPR00449RASTRNSFRMNGcoord: 89..105
score: 26.7
coord: 66..87
score: 35.23
coord: 172..185
score: 35.8
coord: 210..232
score: 27.15
NoneNo IPR availableSMARTSM00175rab_sub_5coord: 66..235
e-value: 2.3E-13
score: 57.2
NoneNo IPR availableSMARTSM00173ras_sub_4coord: 63..235
e-value: 1.1E-5
score: -27.5
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..41
NoneNo IPR availablePANTHERPTHR24073:SF862RAS-RELATED PROTEIN RAB-32coord: 58..237
NoneNo IPR availablePANTHERPTHR24073DRAB5-RELATEDcoord: 58..237
NoneNo IPR availablePROSITEPS51419RABcoord: 61..291
score: 18.567469
IPR027417P-loop containing nucleoside triphosphate hydrolaseGENE3D3.40.50.300coord: 53..245
e-value: 5.0E-32
score: 112.7
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 62..233
IPR001806Small GTPasePFAMPF00071Rascoord: 67..233
e-value: 1.6E-23
score: 83.1
IPR001806Small GTPasePROSITEPS51421RAScoord: 59..293
score: 9.222277

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig20contigP-littoralis_Contig20:242428..267525 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig20.57.1mRNA_P-littoralis_Contig20.57.1Pylaiella littoralis U1_48mRNAP-littoralis_Contig20 242348..267946 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig20.57.1 ID=prot_P-littoralis_Contig20.57.1|Name=mRNA_P-littoralis_Contig20.57.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=295bp
MVVSKASEGRKAKGATTTPQDGRSAGSAPPGRRLPPEREGSMARIHSRAQ
KFAESSPTMKSRDKMIKFMFLGDSETGKTAIVTRFATDVFNPTYNPTMDV
DFTQSNVMVGEQRLRVGLWQVSEKKEGTIATNTFRGLHGAFIVADISRQE
TFHGVAKFRKIIDDKLAEVGATSLPVVLLANKSDRLGEDGVSLNKSSMDK
LCKRHRLHGWYATSAKDNTNIDLALKGVLRQALQGGAKTAFSELMPGDVA
ALDAELNGPGADRERSPGQQMLRDHQWFGTQKVAAKQGCACVIS*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR027417P-loop_NTPase
IPR001806Small_GTPase