prot_P-littoralis_Contig20.32.1 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig20.32.1
Unique Nameprot_P-littoralis_Contig20.32.1
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length66
Homology
BLAST of mRNA_P-littoralis_Contig20.32.1 vs. uniprot
Match: D8LG80_ECTSI (40S ribosomal protein S30 n=2 Tax=PX clade TaxID=569578 RepID=D8LG80_ECTSI)

HSP 1 Score: 124 bits (312), Expect = 3.320e-36
Identity = 64/65 (98.46%), Postives = 64/65 (98.46%), Query Frame = 0
Query:    1 MGKVHGSLARAGKVKGQTPKIDKIEKKKQPRGRAKKRMQYNRRFVNVVTGVGGKALGPNSNAAKV 65
            MGKVHGSLARAGKVKGQTPKIDKIEKKKQPRGRAKKRMQYNRRFVNVVTGVGGK LGPNSNAAKV
Sbjct:    1 MGKVHGSLARAGKVKGQTPKIDKIEKKKQPRGRAKKRMQYNRRFVNVVTGVGGKRLGPNSNAAKV 65          
BLAST of mRNA_P-littoralis_Contig20.32.1 vs. uniprot
Match: K0R2S3_THAOC (Uncharacterized protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0R2S3_THAOC)

HSP 1 Score: 110 bits (276), Expect = 5.430e-30
Identity = 55/65 (84.62%), Postives = 61/65 (93.85%), Query Frame = 0
Query:    1 MGKVHGSLARAGKVKGQTPKIDKIEKKKQPRGRAKKRMQYNRRFVNVVTGVGGKALGPNSNAAKV 65
            MGKVHGSLARAGKVKGQTPK++  EKKKQPRGRAKKRMQYNRR+VNVVTG+GGK +GPNSNA K+
Sbjct:   58 MGKVHGSLARAGKVKGQTPKVEAQEKKKQPRGRAKKRMQYNRRYVNVVTGMGGKKVGPNSNADKM 122          
BLAST of mRNA_P-littoralis_Contig20.32.1 vs. uniprot
Match: A0A7S2V4V4_9STRA (Hypothetical protein n=3 Tax=Ochrophyta TaxID=2696291 RepID=A0A7S2V4V4_9STRA)

HSP 1 Score: 107 bits (266), Expect = 2.920e-28
Identity = 55/64 (85.94%), Postives = 59/64 (92.19%), Query Frame = 0
Query:    2 GKVHGSLARAGKVKGQTPKIDKIEKKKQPRGRAKKRMQYNRRFVNVVTGVGGKALGPNSNAAKV 65
            GKVHGSLARAGKVKGQTPK++  EKKK+  GRAKKRMQYNRRFVNVVTGVGGK LGPNSNA+KV
Sbjct:   77 GKVHGSLARAGKVKGQTPKVEAQEKKKKLTGRAKKRMQYNRRFVNVVTGVGGKKLGPNSNASKV 140          
BLAST of mRNA_P-littoralis_Contig20.32.1 vs. uniprot
Match: A0A1E7F7Q1_9STRA (40S ribosomal protein S30 n=4 Tax=Bacillariophyta TaxID=2836 RepID=A0A1E7F7Q1_9STRA)

HSP 1 Score: 103 bits (257), Expect = 8.690e-28
Identity = 53/66 (80.30%), Postives = 61/66 (92.42%), Query Frame = 0
Query:    1 MGKVHGSLARAGKVKGQTPKIDKIEK-KKQPRGRAKKRMQYNRRFVNVVTGVGGKALGPNSNAAKV 65
            MGKVHGSLARAGKVK QTPK++K E+ KKQPRGRAKKR+QYNRR+VNVVTG+GGK +GPNSNA K+
Sbjct:    1 MGKVHGSLARAGKVKNQTPKVEKQEEGKKQPRGRAKKRLQYNRRYVNVVTGMGGKRVGPNSNADKM 66          
BLAST of mRNA_P-littoralis_Contig20.32.1 vs. uniprot
Match: A0A4D9D2L7_9STRA (Ubiquitin-like domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9D2L7_9STRA)

HSP 1 Score: 102 bits (254), Expect = 2.050e-26
Identity = 51/64 (79.69%), Postives = 58/64 (90.62%), Query Frame = 0
Query:    2 GKVHGSLARAGKVKGQTPKIDKIEKKKQPRGRAKKRMQYNRRFVNVVTGVGGKALGPNSNAAKV 65
            GKVHGSLARAGKVKGQTPK++K EK+K PRGRAKKR+ Y+RRF+NV TGVGGK LGPNSNA K+
Sbjct:   77 GKVHGSLARAGKVKGQTPKVEKQEKRKTPRGRAKKRVLYSRRFLNVATGVGGKRLGPNSNADKM 140          
BLAST of mRNA_P-littoralis_Contig20.32.1 vs. uniprot
Match: A0A8J2X0V5_9STRA (Hypothetical protein n=3 Tax=Pelagomonadales TaxID=54409 RepID=A0A8J2X0V5_9STRA)

HSP 1 Score: 102 bits (253), Expect = 9.470e-26
Identity = 52/61 (85.25%), Postives = 54/61 (88.52%), Query Frame = 0
Query:    2 GKVHGSLARAGKVKGQTPKIDKIEKKKQPRGRAKKRMQYNRRFVNVVTGVGGKALGPNSNA 62
            GKVHGSLARAGKVKGQTPK++K EKKK P GRAKKRM YNRRFVNVV GVGGK  GPNSNA
Sbjct:   91 GKVHGSLARAGKVKGQTPKVEKQEKKKLPTGRAKKRMLYNRRFVNVVAGVGGKRFGPNSNA 151          
BLAST of mRNA_P-littoralis_Contig20.32.1 vs. uniprot
Match: A0A2P6VFJ9_9CHLO (40S ribosomal protein S30 n=1 Tax=Micractinium conductrix TaxID=554055 RepID=A0A2P6VFJ9_9CHLO)

HSP 1 Score: 97.1 bits (240), Expect = 2.920e-25
Identity = 48/60 (80.00%), Postives = 53/60 (88.33%), Query Frame = 0
Query:    1 MGKVHGSLARAGKVKGQTPKIDKIEKKKQPRGRAKKRMQYNRRFVNVVTGVGGKALGPNS 60
            MGKVHGSLARAGKV+GQTPK+ K EKKK P+GRA+KR+QYNRRFVNVV G GGK  GPNS
Sbjct:    1 MGKVHGSLARAGKVRGQTPKVPKQEKKKTPKGRARKRLQYNRRFVNVVVGFGGKKKGPNS 60          
BLAST of mRNA_P-littoralis_Contig20.32.1 vs. uniprot
Match: A0A2R5GNZ5_9STRA (Ubiquitin n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5GNZ5_9STRA)

HSP 1 Score: 98.2 bits (243), Expect = 1.280e-24
Identity = 50/65 (76.92%), Postives = 57/65 (87.69%), Query Frame = 0
Query:    2 GKVHGSLARAGKVKGQTPKIDKI-EKKKQPRGRAKKRMQYNRRFVNVVTGVGGKALGPNSNAAKV 65
            GKVHGSLARAGKVKGQTPK++K  +KKK PRGRAKKR+QYNRRFVNVV   GGK LGPN+NA ++
Sbjct:   77 GKVHGSLARAGKVKGQTPKVEKQGDKKKDPRGRAKKRLQYNRRFVNVVRAPGGKTLGPNNNAERI 141          
BLAST of mRNA_P-littoralis_Contig20.32.1 vs. uniprot
Match: A0A484DSZ2_BRELC (Uncharacterized protein n=1 Tax=Bremia lactucae TaxID=4779 RepID=A0A484DSZ2_BRELC)

HSP 1 Score: 95.5 bits (236), Expect = 2.270e-24
Identity = 53/65 (81.54%), Postives = 54/65 (83.08%), Query Frame = 0
Query:    2 GKVHGSLARAGKVKGQTPKIDKIE-KKKQPRGRAKKRMQYNRRFVNVVTGVGGKALGPNSNAAKV 65
            GKVHGSLARAGKVKGQTPK+ K E  KK   GRAKKR QYNRRFVNVV G GGK LGPNSNAAKV
Sbjct:   21 GKVHGSLARAGKVKGQTPKVPKQEDSKKALTGRAKKRWQYNRRFVNVVAGSGGKKLGPNSNAAKV 85          
BLAST of mRNA_P-littoralis_Contig20.32.1 vs. uniprot
Match: G4YM34_PHYSP (Uncharacterized protein n=14 Tax=Peronosporaceae TaxID=4777 RepID=G4YM34_PHYSP)

HSP 1 Score: 95.1 bits (235), Expect = 3.320e-24
Identity = 52/64 (81.25%), Postives = 54/64 (84.38%), Query Frame = 0
Query:    2 GKVHGSLARAGKVKGQTPKIDKIE-KKKQPRGRAKKRMQYNRRFVNVVTGVGGKALGPNSNAAK 64
            GKVHGSLARAGKVKGQTPK+ K E  KK   GRAKKR QYNRRFVNVV G+GGK LGPNSNAAK
Sbjct:   22 GKVHGSLARAGKVKGQTPKVPKQEDSKKALTGRAKKRWQYNRRFVNVVAGMGGKKLGPNSNAAK 85          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig20.32.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LG80_ECTSI3.320e-3698.4640S ribosomal protein S30 n=2 Tax=PX clade TaxID=5... [more]
K0R2S3_THAOC5.430e-3084.62Uncharacterized protein n=1 Tax=Thalassiosira ocea... [more]
A0A7S2V4V4_9STRA2.920e-2885.94Hypothetical protein n=3 Tax=Ochrophyta TaxID=2696... [more]
A0A1E7F7Q1_9STRA8.690e-2880.3040S ribosomal protein S30 n=4 Tax=Bacillariophyta ... [more]
A0A4D9D2L7_9STRA2.050e-2679.69Ubiquitin-like domain-containing protein n=2 Tax=M... [more]
A0A8J2X0V5_9STRA9.470e-2685.25Hypothetical protein n=3 Tax=Pelagomonadales TaxID... [more]
A0A2P6VFJ9_9CHLO2.920e-2580.0040S ribosomal protein S30 n=1 Tax=Micractinium con... [more]
A0A2R5GNZ5_9STRA1.280e-2476.92Ubiquitin n=1 Tax=Hondaea fermentalgiana TaxID=231... [more]
A0A484DSZ2_BRELC2.270e-2481.54Uncharacterized protein n=1 Tax=Bremia lactucae Ta... [more]
G4YM34_PHYSP3.320e-2481.25Uncharacterized protein n=14 Tax=Peronosporaceae T... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR006846Ribosomal protein S30PFAMPF04758Ribosomal_S30coord: 3..61
e-value: 2.1E-28
score: 98.3
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..33
NoneNo IPR availablePANTHERPTHR1265040S RIBOSOMAL PROTEIN S30/UBIQUITIN-LIKE PROTEIN FUBIcoord: 2..63

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig20contigP-littoralis_Contig20:142948..147598 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig20.32.1mRNA_P-littoralis_Contig20.32.1Pylaiella littoralis U1_48mRNAP-littoralis_Contig20 142948..147598 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig20.32.1 ID=prot_P-littoralis_Contig20.32.1|Name=mRNA_P-littoralis_Contig20.32.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=66bp
MGKVHGSLARAGKVKGQTPKIDKIEKKKQPRGRAKKRMQYNRRFVNVVTG
VGGKALGPNSNAAKV*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR006846Ribosomal_S30