mRNA_P-littoralis_Contig1.148.1 (mRNA) Pylaiella littoralis U1_48

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-littoralis_Contig1.148.1
Unique NamemRNA_P-littoralis_Contig1.148.1
TypemRNA
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Homology
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BLAST of mRNA_P-littoralis_Contig1.148.1 vs. uniprot
Match: D8LNC5_ECTSI (Nuclear nucleic acid-binding protein C1D n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LNC5_ECTSI)

HSP 1 Score: 285 bits (729), Expect = 1.600e-88
Identity = 144/156 (92.31%), Postives = 149/156 (95.51%), Query Frame = 1 
Query:    1 MAGASEESKGVESLKNFERALGHVRNSVRPLTLMSREEVGTCVSAADRAKLNLQVAYGVSSLFYMFLKTQGVSPSTHPVKAELDRIRGYFGRLKQVGKPPEQRTLKVDAEASRRFINAALSSDSVWQNAKGTDPKSAQERRAAAGIGRSNPAGQPE 468
            MAGASEESKGVESLKNFERALGHVRNSVRPLTLMSREEVG CVSA DRA LNLQVAYGVSSLFYMFLKTQGVSPSTHPVK ELDRIRGYFGRLK VGKPPEQRTLKVD +ASRRFINAALS DSVWQNAKGTDPKSAQ++RA+AGIGR+NPAGQPE
Sbjct:    1 MAGASEESKGVESLKNFERALGHVRNSVRPLTLMSREEVGGCVSAKDRATLNLQVAYGVSSLFYMFLKTQGVSPSTHPVKGELDRIRGYFGRLKNVGKPPEQRTLKVDQDASRRFINAALSGDSVWQNAKGTDPKSAQQKRASAGIGRANPAGQPE 156
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BLAST of mRNA_P-littoralis_Contig1.148.1 vs. uniprot
Match: UPI001F04DAC0 (nuclear nucleic acid-binding protein C1D-like n=1 Tax=Xenia sp. Carnegie-2017 TaxID=2897299 RepID=UPI001F04DAC0)

HSP 1 Score: 97.1 bits (240), Expect = 6.440e-20
Identity = 49/130 (37.69%), Postives = 84/130 (64.62%), Query Frame = 1 
Query:   37 SLKNFERALGHVRNSVRPLTLMSREEVGTCVSAADRAKLNLQVAYGVSSLFYMFLKTQGVSPSTHPVKAELDRIRGYFGRLKQVGKPPEQRTLKVDAEASRRFINAALSSDSVWQNAKGTDPKSAQERRA 426
            ++K+F  + G V  ++ PL   S +E+   +   DRAKL+L V YG++++F+++L TQGV+P  H VK ELDRI+ Y  ++K V +  ++ ++K+D +A+RRF+  AL+      N K ++  S +E+RA
Sbjct:   18 AMKDFHHSFGSVEETLEPLLRSSNDELHEKLDVLDRAKLDLMVVYGINTMFWIYLITQGVNPKEHGVKHELDRIKNYMKKVKDVSER-KKASMKIDKDAARRFVKGALA------NPKASEVVSDKEKRA 140
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BLAST of mRNA_P-littoralis_Contig1.148.1 vs. uniprot
Match: A0A835ZH36_9STRA (Nuclear nucleic acid-binding protein C1D (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZH36_9STRA)

HSP 1 Score: 97.1 bits (240), Expect = 7.770e-20
Identity = 57/140 (40.71%), Postives = 87/140 (62.14%), Query Frame = 1 
Query:    7 GASEESKGVESLKNFERALGHVRNSVRPLTLMSREEVGTCVSAADRAKLNLQVAYGVSSLFYMFLKTQGVSPSTHPVKAELDRIRGYFGRLKQVGKPPEQRTLKVDAEASRRFINAALSSDSVWQNAKGTDPKSAQERRA 426
            G++  +  V  L N  +AL ++++ +RPLT  +REE+ + V+  + AKLN  +AYG+SSL+YM L+T+G   + H VK ELDRI+G  GRL+ V  P  QR + V+  A++RFI   L+ +      +G D    +ERRA
Sbjct:   14 GSNSATDFVAPLTNLHKALHNLKSKLRPLTETTREELASQVTKQEMAKLNAAMAYGISSLYYMLLRTKGCDTTDHGVKKELDRIKGAMGRLQMVKVP--QRGIVVNVAAAQRFIKHGLAGN------EGVD----EERRA 141
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BLAST of mRNA_P-littoralis_Contig1.148.1 vs. uniprot
Match: A0A2R2MU34_LINUN (Nuclear nucleic acid-binding protein C1D n=1 Tax=Lingula unguis TaxID=7574 RepID=A0A2R2MU34_LINUN)

HSP 1 Score: 96.7 bits (239), Expect = 2.280e-19
Identity = 60/167 (35.93%), Postives = 96/167 (57.49%), Query Frame = 1 
Query:    1 MAGASEE--SKGVESLKNFERALGHVRNSVRPLTLMSREEVGTCVSAADRAKLNLQVAYGVSSLFYMFLKTQGVSPSTHPVKAELDRIRGYFGRLKQVGKPPEQRTLKVDAEASRRFINAALSSDSVWQ--NAKGTDPKSAQERRAAAGIGRSNPAGQPEMINNTLE 489
            MAG SE+  S+  + L +F+ +L  V ++++PL +    EV   ++  D AK+NL  AY V+SLF+ +L  +G +P  HPVK ELDRIRGY  R+K++ +  +++  K+D  AS+RF+ +AL     WQ  +AK +  K      + A   R  P  + + +N   E
Sbjct:    5 MAGTSEDFPSEIQDQLSSFDDSLTKVEDTLKPLLMTPLNEVHEKLNPLDCAKVNLVAAYAVNSLFWTYLNVRGENPKEHPVKQELDRIRGYMNRVKEIQE--KEKAPKLDKPASKRFVKSAL-----WQAAHAKASAQKDDGASTSQADTSRLQPQPKRQRLNEQNE 164
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BLAST of mRNA_P-littoralis_Contig1.148.1 vs. uniprot
Match: A7SDV0_NEMVE (Nuclear nucleic acid-binding protein C1D n=1 Tax=Nematostella vectensis TaxID=45351 RepID=A7SDV0_NEMVE)

HSP 1 Score: 95.1 bits (235), Expect = 4.290e-19
Identity = 46/123 (37.40%), Postives = 79/123 (64.23%), Query Frame = 1 
Query:   31 VESLKNFERALGHVRNSVRPLTLMSREEVGTCVSAADRAKLNLQVAYGVSSLFYMFLKTQGVSPSTHPVKAELDRIRGYFGRLKQVGKPPEQRTLKVDAEASRRFINAALSSDSVWQNAKGTD 399
            V+S+++F  +LG++ ++++PL   S +++   +     AKLNL VAY ++SLF+M+L TQG+ P  HP+K ELDRI+ Y  ++K+V    E  ++++D  A++RF+ +AL     WQ     D
Sbjct:   16 VDSMESFHESLGNIEDALKPLLENSTDDMKESMGPLQLAKLNLVVAYSINSLFWMYLITQGMDPKEHPIKQELDRIKKYMVKVKEVQHKQEV-SMRIDKGAAKRFVKSAL-----WQPTSNED 132
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BLAST of mRNA_P-littoralis_Contig1.148.1 vs. uniprot
Match: UPI00138FBE06 (nuclear nucleic acid-binding protein C1D n=1 Tax=Nematostella vectensis TaxID=45351 RepID=UPI00138FBE06)

HSP 1 Score: 95.1 bits (235), Expect = 4.630e-19
Identity = 46/123 (37.40%), Postives = 79/123 (64.23%), Query Frame = 1 
Query:   31 VESLKNFERALGHVRNSVRPLTLMSREEVGTCVSAADRAKLNLQVAYGVSSLFYMFLKTQGVSPSTHPVKAELDRIRGYFGRLKQVGKPPEQRTLKVDAEASRRFINAALSSDSVWQNAKGTD 399
            V+S+++F  +LG++ ++++PL   S +++   +     AKLNL VAY ++SLF+M+L TQG+ P  HP+K ELDRI+ Y  ++K+V    E  ++++D  A++RF+ +AL     WQ     D
Sbjct:   16 VDSMESFHESLGNIEDALKPLLENSTDDMKESMGPLQLAKLNLVVAYSINSLFWMYLITQGMDPKEHPIKQELDRIKKYMVKVKEVQHKQEV-SMRIDKGAAKRFVKSAL-----WQPTSNED 132
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BLAST of mRNA_P-littoralis_Contig1.148.1 vs. uniprot
Match: A0A2D4BWA5_PYTIN (Nuclear nucleic acid-binding protein C1D n=2 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BWA5_PYTIN)

HSP 1 Score: 90.1 bits (222), Expect = 3.000e-17
Identity = 51/124 (41.13%), Postives = 79/124 (63.71%), Query Frame = 1 
Query:   31 VESLKNFERALGHVRNSVRPLTLMSREEVGTCVSAADRAKLNLQVAYGVSSLFYMFLKTQGVSPS----THPVKAELDRIRGYFGRLKQVGKPPEQRTLKVDAEASRRFINAALSSDSVWQNAK 390
            VE+L + ++ L  V   ++ L   S EE    +S  ++AK+ + +AY +++L Y++LKTQGVS      TH VK ELDR++G+  ++K   +  +  TLK+D EAS+RFIN ALS D V+ +AK
Sbjct:    6 VEALTSVDQTLAAVEEHLQVLKNKSLEEFLAELSPIEKAKVQVSLAYSINALLYVYLKTQGVSSKDIRQTH-VKQELDRVKGFIKKIKDTEELAKGPTLKLDKEASQRFINNALSGDQVYVDAK 128
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BLAST of mRNA_P-littoralis_Contig1.148.1 vs. uniprot
Match: C1D_XENLA (Nuclear nucleic acid-binding protein C1D n=2 Tax=Xenopus TaxID=8353 RepID=C1D_XENLA)

HSP 1 Score: 88.6 bits (218), Expect = 4.440e-17
Identity = 44/109 (40.37%), Postives = 71/109 (65.14%), Query Frame = 1 
Query:   34 ESLKNFERALGHVRNSVRPLTLMSREEVGTCVSAADRAKLNLQVAYGVSSLFYMFLKTQGVSPSTHPVKAELDRIRGYFGRLKQVGKPPEQRTLKVDAEASRRFINAAL 360
            E L  FE ++G V   ++ +  +SR E+   +   ++AKL+L  AY ++SLF+++L TQG++P  HPVK EL+RIRGY  R+K++     ++  ++D  A+RRFI  AL
Sbjct:   17 EYLMAFENSVGSVDEMLKKMMSVSRSELLQKIEPLEQAKLDLVSAYTLNSLFWIYLTTQGINPKEHPVKEELERIRGYMNRVKEI--TDRKKAARLDKGAARRFIKHAL 123
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BLAST of mRNA_P-littoralis_Contig1.148.1 vs. uniprot
Match: L8HHM1_ACACA (Nuclear nucleic acid-binding protein C1D n=1 Tax=Acanthamoeba castellanii str. Neff TaxID=1257118 RepID=L8HHM1_ACACA)

HSP 1 Score: 89.4 bits (220), Expect = 4.800e-17
Identity = 44/129 (34.11%), Postives = 81/129 (62.79%), Query Frame = 1 
Query:   37 SLKNFERALGHVRNSVRPLTLMSREEVGTCVSAADRAKLNLQVAYGVSSLFYMFLKTQGVSPSTHPVKAELDRIRGYFGRLKQVGKPPEQRTLKVDAEASRRFINAALSSDSVWQNAKGTDPKSAQERR 423
            ++   E+A+  V   +      S +E+   +S  D A+L++ +AY +++LFY++LKTQGV P+ HPVK E++R++ Y  +LKQ+ +P E  ++ +D +A+ RFI  A++S     NA+    ++A+E +
Sbjct:   16 TISTLEKAVSDVEKHIESYLKTSVDEITNDLSTEDGARLSVLLAYALNTLFYIYLKTQGVDPADHPVKDEIERVKEYIQKLKQLTQPKETPSMVLDKQAANRFIQHAVNS----ANAENERSEAAREEK 140
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BLAST of mRNA_P-littoralis_Contig1.148.1 vs. uniprot
Match: A0A673HC71_9TELE (Nuclear nucleic acid-binding protein C1D n=20 Tax=Cyprinidae TaxID=7953 RepID=A0A673HC71_9TELE)

HSP 1 Score: 88.2 bits (217), Expect = 6.210e-17
Identity = 43/109 (39.45%), Postives = 71/109 (65.14%), Query Frame = 1 
Query:   34 ESLKNFERALGHVRNSVRPLTLMSREEVGTCVSAADRAKLNLQVAYGVSSLFYMFLKTQGVSPSTHPVKAELDRIRGYFGRLKQVGKPPEQRTLKVDAEASRRFINAAL 360
            E+L +F+ +L  V+N V+ L  +SR      +   DRAKL+L  AY ++S+F+M+L TQGV+P  H +K ELDRIR Y  ++K++    +++  ++D +A+ RF+  AL
Sbjct:   16 ENLNDFDSSLSSVQNMVQTLVSVSRSHNLLKLDPLDRAKLDLMSAYALNSMFWMYLVTQGVNPKDHAIKQELDRIRTYMNKVKEI--TDKRKAARLDKDAASRFVRNAL 122
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig1.148.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LNC5_ECTSI1.600e-8892.31Nuclear nucleic acid-binding protein C1D n=1 Tax=E... [more]
UPI001F04DAC06.440e-2037.69nuclear nucleic acid-binding protein C1D-like n=1 ... [more]
A0A835ZH36_9STRA7.770e-2040.71Nuclear nucleic acid-binding protein C1D (Fragment... [more]
A0A2R2MU34_LINUN2.280e-1935.93Nuclear nucleic acid-binding protein C1D n=1 Tax=L... [more]
A7SDV0_NEMVE4.290e-1937.40Nuclear nucleic acid-binding protein C1D n=1 Tax=N... [more]
UPI00138FBE064.630e-1937.40nuclear nucleic acid-binding protein C1D n=1 Tax=N... [more]
A0A2D4BWA5_PYTIN3.000e-1741.13Nuclear nucleic acid-binding protein C1D n=2 Tax=P... [more]
C1D_XENLA4.440e-1740.37Nuclear nucleic acid-binding protein C1D n=2 Tax=X... [more]
L8HHM1_ACACA4.800e-1734.11Nuclear nucleic acid-binding protein C1D n=1 Tax=A... [more]
A0A673HC71_9TELE6.210e-1739.45Nuclear nucleic acid-binding protein C1D n=20 Tax=... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig1contigP-littoralis_Contig1:859989..868808 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Pylaiella littoralis U1_48 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog2880.D8LNC5
Preferred nameC1D
PFAMsSas10_Utp3
Model size1790
Max annot lvl2759|Eukaryota
KEGG koko:K12592
KEGG Pathwayko03018,map03018
Hectar predicted targeting categoryother localisation
GOsGO:0000176,GO:0000178,GO:0000459,GO:0000460,GO:0000466,GO:0000467,GO:0000469,GO:0000956,GO:0000972,GO:0000973,GO:0003674,GO:0003676,GO:0003677,GO:0003690,GO:0003712,GO:0003714,GO:0003723,GO:0003725,GO:0005102,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005730,GO:0006139,GO:0006355,GO:0006364,GO:0006396,GO:0006399,GO:0006401,GO:0006402,GO:0006403,GO:0006725,GO:0006807,GO:0006996,GO:0008134,GO:0008150,GO:0008152,GO:0008298,GO:0009056,GO:0009057,GO:0009889,GO:0009890,GO:0009892,GO:0009987,GO:0010467,GO:0010468,GO:0010556,GO:0010558,GO:0010605,GO:0010629,GO:0016043,GO:0016070,GO:0016071,GO:0016072,GO:0016073,GO:0016074,GO:0016075,GO:0016078,GO:0016180,GO:0016922,GO:0017053,GO:0019219,GO:0019222,GO:0019439,GO:0022613,GO:0030234,GO:0031123,GO:0031125,GO:0031126,GO:0031323,GO:0031324,GO:0031326,GO:0031327,GO:0031974,GO:0031981,GO:0032069,GO:0032991,GO:0033036,GO:0034470,GO:0034472,GO:0034475,GO:0034476,GO:0034641,GO:0034655,GO:0034660,GO:0034661,GO:0035257,GO:0042254,GO:0043144,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043628,GO:0043632,GO:0043633,GO:0043634,GO:0044085,GO:0044237,GO:0044238,GO:0044248,GO:0044260,GO:0044265,GO:0044270,GO:0044422,GO:0044424,GO:0044428,GO:0044446,GO:0044464,GO:0045892,GO:0045934,GO:0046483,GO:0046700,GO:0048519,GO:0048523,GO:0050789,GO:0050790,GO:0050794,GO:0051171,GO:0051172,GO:0051179,GO:0051252,GO:0051253,GO:0051276,GO:0051336,GO:0051427,GO:0051641,GO:0060255,GO:0060700,GO:0065007,GO:0065009,GO:0070013,GO:0070651,GO:0070727,GO:0071025,GO:0071027,GO:0071028,GO:0071029,GO:0071033,GO:0071034,GO:0071035,GO:0071038,GO:0071039,GO:0071042,GO:0071043,GO:0071046,GO:0071047,GO:0071051,GO:0071704,GO:0071840,GO:0080090,GO:0090304,GO:0090305,GO:0090501,GO:0090503,GO:0097159,GO:0098772,GO:0140110,GO:1901360,GO:1901361,GO:1901363,GO:1901575,GO:1901917,GO:1902494,GO:1902679,GO:1903506,GO:1903507,GO:1905354,GO:1905777,GO:2000112,GO:2000113,GO:2001141
Exons4
Evalue3.74e-93
EggNOG OGsKOG4835@1|root,KOG4835@2759|Eukaryota
Ec32 ortholog descriptionExosome-associated factor Rrp47/DNA strand repair C1D
Ec32 orthologEc-04_004370.1
Descriptionmaturation of 5.8S rRNA
Cds size933
COG categoryH
BRITEko00000,ko00001,ko03019
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789314.8406932-CDS-P-littoralis_Contig1:859988..8600681680789314.8406932-CDS-P-littoralis_Contig1:859988..860068Pylaiella littoralis U1_48CDSP-littoralis_Contig1 859989..860068 +
1680789314.8548007-CDS-P-littoralis_Contig1:864334..8644161680789314.8548007-CDS-P-littoralis_Contig1:864334..864416Pylaiella littoralis U1_48CDSP-littoralis_Contig1 864335..864416 +
1680789314.8629296-CDS-P-littoralis_Contig1:866576..8666741680789314.8629296-CDS-P-littoralis_Contig1:866576..866674Pylaiella littoralis U1_48CDSP-littoralis_Contig1 866577..866674 +
1680789314.8719954-CDS-P-littoralis_Contig1:867278..8679511680789314.8719954-CDS-P-littoralis_Contig1:867278..867951Pylaiella littoralis U1_48CDSP-littoralis_Contig1 867279..867951 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789314.8810272-UTR-P-littoralis_Contig1:867951..8688081680789314.8810272-UTR-P-littoralis_Contig1:867951..868808Pylaiella littoralis U1_48UTRP-littoralis_Contig1 867952..868808 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig1.148.1prot_P-littoralis_Contig1.148.1Pylaiella littoralis U1_48polypeptideP-littoralis_Contig1 859989..867951 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-littoralis_Contig1.148.1

>prot_P-littoralis_Contig1.148.1 ID=prot_P-littoralis_Contig1.148.1|Name=mRNA_P-littoralis_Contig1.148.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=311bp
MAGASEESKGVESLKNFERALGHVRNSVRPLTLMSREEVGTCVSAADRAK
LNLQVAYGVSSLFYMFLKTQGVSPSTHPVKAELDRIRGYFGRLKQVGKPP
EQRTLKVDAEASRRFINAALSSDSVWQNAKGTDPKSAQERRAAAGIGRSN
PAGQPEMINNTLEAAAAAVLGTPAAQDTPAGTTAKKAGRQRHQEQRRRQQ
QQQQQQESVPGLGGSGSKRKHAAAAAAAAGADGAGSAAGGGAAPSTVGGT
TGKTSTGGGKGGKVNSGEGPGAAKWGEGPDAVPGGSPPAVKKAKGSGRKN
KKKAAGHRSW*
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mRNA from alignment at P-littoralis_Contig1:859989..868808+

Legend: CDSpolypeptideUTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-littoralis_Contig1.148.1 ID=mRNA_P-littoralis_Contig1.148.1|Name=mRNA_P-littoralis_Contig1.148.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=8820bp|location=Sequence derived from alignment at P-littoralis_Contig1:859989..868808+ (Pylaiella littoralis U1_48)
ATGGCGGGTGCTAGCGAGGAGAGCAAAGGCGTGGAGTCGCTGAAGAACTT
CGAACGAGCTCTTGGACATGTGCGCAACAGGTGATGGAGCAATCCAAAGT
TGGGCCCGCGACTACACGGGTGGAATTTATATTTTCCGTCGTGTAAGCTT
TTCCCAGCTTGGTTGTAGTTGCTCGAGGGTGGACAGGGTTGCCCCCCCGA
GACCGTACTTGTACAAGTATAAGCGATTAAAAGTGCCAGATATAGATAAC
CTGAGACAGCAGATCAGTACGGACCGTATTTTAAACGTGTTGTGTGAAAA
AGTTGCTTCACACTAAAACTCTGTCCACGAGTACCATCCGTCCACTTCCA
CCCGTCGTATCATTCGCCTGTAAAATACTAGTGTAGTGGATCGGCGTTAA
TCAGTGTGCGTTGGAGGGCCGCTTATCAACATCTGCGTTAAGCCGTGTGC
GTTGCTGTTTGGTGGCGTGTATGCCCCCATGGCTGCAGCGCTGCTGCTGC
AGCAGAATAGCAGTTGTGATGTTCCGCCAGCACAACGAACACAAAACGCC
TCTGATCATTTTTCACAAAAAAGGGACACCGAAAATAAAAAGCCTCCTGC
AACATAGCTGTGCGCACAGGACACGGGCTGCGGTGAACCCAGCAGCAATG
GGTAGATCCTATTTACCTCATCAGTTGAAGCCCTTGGTGGTAACGATCTG
TGCTGAACTGGTGCCACAGTGTTTTAAAATGTGGCCATCATCTCGGACAC
ACACACACGACGCTGGAAGTACGTTCCTGTTGGTACTTCTGCTGTGACTG
CTGTAGTTCAGTGATGTACACCGCGTAGGAAGGTGTATCTTCTTCGGTCT
TTCTTGGGTTGTTGTTTTGTTGTTGATTCTCACATTAGCTCGTCGCCAAA
ATCTAGCCCGTGGTCACAAAAAGTGCTGAGCCCTAGGAAGATCCAAAAAA
CAGAAAGAAACTACAGGGGAATATCCGAGAAAGACCGAAGAAGATACACC
TTCCTACGCGGTGTGCATCACTGAACTACAGCAGTCACAGCAGTACCAAC
ATCAAAGTACTTCGAGCGTCGTTCATTTGACTACAACATCGTGTTCAGTC
TCCTCCCGCCCCACTTACAACTAATAACCTGCTGTTACAAGCAGTCAGTA
GGTAGCTGCAGACTACAGCAGTTAGTTGCTGTCTGGAGTGCTGCCTGCAA
TGTACAAGTAGCCCAGGGCAATCGGAGAAGACAGAAAAAGAAAAACACAA
AAACACACACGTATCAACAGGATAGTGTCTCCATGCCGTCCTTGCGACGC
TGGTGATGATGTCGTCCTAAACATTTCCTCCTTGTCTGGGTCCACGTTGC
TGTTGGCGTTGCCCAAGGCCACATCGCCAGCACCATGCTCTCGTAACGCT
TCTTCTTATTCCCTTGTAGTTTATTTTCTGTTTTTTGGATCCTCCTAGGG
CTCAGCACTTTTTGTGACCACGGGCTAGATTTTGGCGATGAGCTAATAAT
GTGAGAATCAACAACACAGACAGACAGACAGACAGACAGACACCATGAAC
CTCGATAATTAGAAAGAGACCCTGTCTCAAGTTTATTTTTTTATTTTTTT
ATTCGCACATACACTCACACGTACACATCACGACAAATCGGTATGAATTC
GAAGCAGTTCGACACCGAAGTTACACTTCGCTGCGCTCGTGCGCTCGTGG
ACTGCTTCTCAATACGAGATGAAAAGAGCACGCACAGGCGTTCCAGGTTA
CGAAGTACGAAGTACATCTTATGTGTCAAAAACGTCGTTATTTGTTTTGG
GCCGTTCGAATAATAACGTTTCCAACAGGCTCTGTTGAAGGACCGACACT
GTGTTCAAAACTGAACAGCAGGTAGTTTTATTTTATCAACTTTCGAAAAA
AAAAGTCTCTCCTGTTCGGCTGGGGCGGTTTGATAGTAGACAACTTGACT
CTCATGTTGCACTGCTGTAACCGGTTCGCTCTCTCGTCCACCACTCTCGA
ACGAAGCCACAGCAATGGTAAGGACATGCCGAGCTGGGTATATTGTCCTT
CTCCCGTGGTTTTGCTAGTGGATCGGGGTTGAGAAGCAGTGTGCGTTGGA
GGACCGCTTCTCAAATAACTGTGTGCACAACAAACACAACACGCCTCTCA
TCATTTTTCACAAAAAAGGGACCCCAATAATAACGCGACTCCGAAAAGAT
AGCTGTGCGCACAGGACACGGGCTGCGGTGAACCCAGCAGCAGTGAGTAG
ATGCTATTTACCTCATCAGTTCAAACCCTTGGTCGTAGCGATCTGTGCTG
AACTGGTGTGAAAGTGTTGCAAAATGTGGCCATTATCTCGGACAGACAGA
CACACAGACACCATCAACCTCAAAATTAAATAAAGTCACCCCTGTCTCCG
ATTTTTTTTTTTTTTATTCGCACACTCATACCTACACATCACGACAAAAT
CGGTATGAATTCGAAGCAGTTCGACACCGAAGTTACACTTCGCTGCGCGG
ACTGCTTCTCAAAAAAAGACCGCGAGGTATCGATAGACTGGCGAAAAAAG
GTTGCAAGCATCATCGATGACGTGTGAAGAAACGAAACAATATCGATGCA
GCTCACCAGCAGGTAGTGGTGATTTTTTCTTTTTCCACTGGCCATCAATT
CCTGCAATCCTCTTACGCCAGCCTATCGATGCCTCGCTGCTTCCGAGGAC
TACCGGAGGAGAGAGACCACGTGCACAGCTCGCGAGGCATGGCTTTACCA
TTGCTGTGGCTTCATTCGTTCGAGAGCAATCAACAGAAAATCAAACTGGT
GTGGCGGCAAAAAAAACGCTGCTGTGTTGAAGAGTTCAGAGGACAGCAGC
AGCAGCATCAGCTAGCTGCCAGCTCTCGTCCGATCCATTTTGGTTTTTGG
TCCATCGCTCTCGAACGAAATAACCCACAGCAATACTAAAGCCATCGGCC
TTGAGGTGTATGTATGGTCCTTCTCGTGCGTCGGGCATCAGAGGCCGCGG
GGAATCGATGGGCTACCAAAACAAATTTTGCAGGTCATCTCATCATGCAA
GGCTGACTGTAACTTGGGGTGTTCAAACTCCTTGACCCAAAAGATAACAG
GTTTCCGATAGGTGCAGGCTGTAAAAATTACTTTTTCTGATCGTTTGGGG
CTATGAGAAAAATGTATTCGAAAAGTCGCTGTCTAAAATGGCTGTTTCTA
ATCACATAAGATGCGCTCCGTTTCCGACCAATATTCAAAACAGCCAAAAA
ATTAAAAATACATGAAAACGATTCTGACACATAATATGTAGCCGTATTGT
AGGAGAAATCGAAAATGCCAGAAAAAAAAAAACAGTTTTTTGCAGACAAC
AATAAATGCTGGAATCACAACCCCCGGGGTTATTCCGCGTCCAAAGCTCG
GTTATTTTGCCACACCTCCCGGTGCTGATCCAAAATCATGCAAGAGCGGG
ATGTGTACTACAACGTGCCACCTCCATCCCTGGAGATTTCTGAGCCATTT
GGGTCACTATTCGAAGCTGACACCTCGGGTGAAGGTATACTTCGTATATA
TATTTATTTCGCGTGGCTTCTACGATGTTTGTCGAGGTAGCTGTATCATC
ATCCCCTTGGACTGCCAGATTGCGCCGCTCAAGACTGTGGAAGGTCGTAC
TCGATTTGGCTGATCTGGGGTGACTTTTGCAGGCCGGCGTCGGGCGCTGT
ACTGTAGTGCCGATCCAAAATTATGGAATCCCTGTCCGTGTTCTATGGTT
ATGTGACTATCTTGGGGTGGAGTATCGGCCGATTTGGGTGACTCTACGAA
GTTGCCGACTGGCGTGAAAGTTGCCTCCCGCGAGCTCCAACGGGCCGCAT
GAAACAGCAGCACTAGGTGATCACGCAGCGATTCTCCCGTTCAAAGCAAA
ATTAAAGCGTATCAACAGCTGTACGATGAGGGCTGTAACCAACTCTAGAT
GTCTACCGACTTCCGTGGCGACGCTTGGTCTGTGCGAAGAGCGCAAGGTG
ACGACCAAGTGTGTTCAGTAGCGGTGCAGCAGTGCCAAAATTCGGGGGGG
GGGGCTGGCAAATATTATTTTCCCGACTGAGCCAACACGCCTCCGATTTT
GTCTCTACTTTTTTTTCATCTCCTATAGACTGCAACGCCTTTGACGGCCT
TTGACCCTCGTGGACCCCTCCCCCCCCCTTTCTCTCTCTCTCTCTCTCTC
TCTCTCTATCTCTCTCTCTTATCTTCTGTCTCTTTCTAGCATATCTCCTC
GGCCTTACCAACATGCCCCCTTTTCCACCCTCTTTCGTGCCCACACCCTG
TGCCTTTATCCACCCCAATACGCTCGCCCGTCGTGTCCGCCGAAAGTGTG
CGGCCTTTGACGCTCATGAGCCGTGAGGAGGTCGGCACTTGCGTCAGCGC
TGCAGACCGCGCCAAGCTCAACTTGCAGGTATCGTAGGCCAGCCTCAAGA
CCGACTGCTCTTTTGGTACATACTTATGATATGATATGATACTGCTGGCA
CAATACATACGAAACGAAGTACTTGCGTGACCTTCACACGTCGTGTGGCT
TCTCATCCTCCAACAGCAGTTCGAGGCGTGATCACGATTATGTCTGTTGC
CTTGCTTGGTGTTCACTACTGTAGCAGCAAGGGCCCGGGGACAGCATGAC
TGCTGCTCTACCGGGCGCGGTGGGCGGACTCAGTCAGAAACACAAAACAA
GAGAGAACGAGAGCTGCTGCCATGACTATGTAATCTTTCTTACGAAGCAT
ATCCCGAGGTACACACATCGGATGTGTCTCGTCCCTGATGACGGTACAAA
ACATCCCTGCAGATGGTTATTCCGGGGACGGCTTTGGGATGACCCAAGCC
GACCACACAGAATAGTTCAGTCTAGGTATGATATTGTGATATACAAGGAC
TCCGGACTCCGCCGCCTTCAGGGTCCTCGTCGTCGGCTTTGGAGGGTCTG
AAAGAAGGCTTTCGGGTTTTCGTGGGATTTCCATACCAAGGAGGGAAGCT
CGAGACCATAGCAATGGCGGAGGCACGAGCGTGGAGAGGGGTGTATCGGC
GACGTCTTTTAGAAAAAAATAAAACCCGCCCCATCATCAAATCTGAAATT
CATGCCCAAACATGCGTTCTACGAAAAGCGTAAGCTATCCCCGCGGGTAC
AACCCTACGAATTCTGCGGCAACGCTCTCAAACGTTGACGACGCCGCTGC
TCTTTGAAGGCTGAAGAAGTGTGTACACGCGTGGGGTAGTAGTATAGGCG
CTGCCGCGGGAGGTTTGCCTACAGAGACAGATGGTTATCCAGTGGTGCAG
GCACAGAGCTGATCCGCGATCGATGTAGAGCATCGATCTACAGCAGCACG
TTTCTCACAGGTTTTTCTCCATGGTTGGCGTTCATAAAGGAAAAATGCAA
CGCGTCAGCTGGGACATCATGTCGCGGCACGCACGACTATACACCCACTC
GCGAAGAGCGACCGAACCACGCGCAGGTCTACACTGCAGTGAAACCCCTC
CGTCTTTTGTGTGTGCGCTGTGTGAGTGTGTGATGTGCGTGTGCGTAGAC
CGGGGCTGCTGCAGCAGCAGCAGCAGGAGCAGCAAGAGCAGCAGCAGCAG
CAGCAGCGAATCAAATATGCAGAAACTCACTTTATTGTCGTACCGTGTGT
GCGTAATGTCTGGGTATGGCACACTGGTCTCGGCAGCAGCAGCACCCGCA
GTACGTCTACAAGTAGTAGCGGTAAAGATCCAAACATCAGGTGTTAAAAT
GCCGAACCCGCCGGTGCTGATGCAGGAGGCTTGAGCGAAAGTTGCACTGC
TCTCGCTCACGCGTCAGACTGAAATCGCGACGCGCAGGCCAGCAACCAGT
GGGATTCCCAGGTTGGTACAGTATCACGAATCAAAGTGGTGTGTGACTGC
TGTGTGCGCGTGCGCGTATCGAACTGGTCAGCAGCAGCAGCAACACCACA
CGCAGCACCCTCCCGGCAGACGCGAGAAAGATCCAAACATGGAATAAAAA
TTGTCGTACTGCACGACCGCGAGGAGAAAGAGCCACGACCTGCTAATGTT
GGTGCAGGAGTATTTAAGCGAACCTCGCACTACTCTCGCTAACGCGTCAG
ATTTAACCGCGACGCGGGACCTGCGGGCCCTACCTCGATATACCGGTATT
CTCACGCTGAGGTTGGCGAAGGCAGCATAATTTTTTTTAAACGCGATTTC
AAGCTGATTCATATGCATCACCAAAAGCGTCTGGCTTAAAGTACGGACGA
AAATCAACGATGGTTGAGCAAATCGCTCTCAGGCCTCCGACATAATAACG
AAATATTTACAAGTCCTGAGTAGTCATGAATTAGTGTACATGACGCGTGT
TGCAAATTTGTCGGTGTTTGGTTTTTCGTGCCATAAAAGCCATGAGCAAA
CGTGGAAACGCCCTCACATTTCTTGGTACTGCTGTAGCTGCTGTCGCGTG
TCATAGCTATGATGTCATACGGTTGCGTCTGTACTCATAAGAGTACAGCA
GCAGCATGGCAATGAATTTTTTTATTCTGTTCACCACACATGACTGGGTT
GCCGGCTACTGCCATTCCTTGCCACACAAAATAACCAGGTGGCCTACGGC
GTAAGCTCCCTCTTCTACATGTTTTTGAAGACGCAGGGGGTTTCGCCTTC
GACTCACCCGGTGAAAGCCGAGCTCGATCGTATCCGGTGAGGAGAGCACA
CCATACTTTAGGAGCTTGCCGTAGTGTGTGTGCGTGTGTGTGCGTATCTG
TGCATGTGTTGTCTCCCACTGTTTCTGGACGCCAGTCCACAGTACACCTT
CCGGTGCATTATATTGGGCGCATCAGCTGGGGTCACAAGCGAGGTCAACA
CGGGGGTTTCGTTTTGTCCGGTGAATTTAATATATCCTCTTTAGTTTCTG
TTTTGGATTTTTTTCGTTAATTTCGTTTTTTTGCGAAGGTCAATAATAGA
AATCAACGTGTAGAGCTCCTTTCGTCTCAACATACGTATGCCGTGTCAAA
AGCTTCAGTTCAAACAACAAAACACGCGAAAAGTCCAATGAAGTCTGGCA
GTAAGCCTTTGCATTTCAATTTCAATCCAACCAACCCTGAAGCGTGCTCC
TACATGCACCGACCGACTCCTCGTTTCTTCGTCTTTCCTGGTCTCTCCCT
CACCACCCACCGCCGATCGCCAACTCGACACTTCTGTGGCATTGCTCTTC
CGGCGCGTGTGCGTTTGACCGCCCTCTTCAAAAACAACACACACACGACA
CACACACAAACAAACAACAACGGAACAACACGACAAGCAGCGGGTACTTC
GGGCGGCTGAAGCAGGTGGGAAAGCCGCCGGAGCAGCGTACCCTCAAGGT
CGACGCAGAGGCTAGTCGACGGTTCATAAACGCCGCTCTCTCTAGTGACA
GCGTCTGGCAGAACGCCAAGGGGACCGACCCCAAGAGTGCCCAGGAGAGG
CGCGCCGCCGCGGGCATCGGACGGAGCAACCCGGCCGGGCAGCCAGAGAT
GATCAACAACACGCTGGAAGCGGCGGCGGCGGCAGTGTTGGGAACACCAG
CAGCGCAGGACACACCGGCGGGAACAACAGCAAAAAAAGCCGGACGGCAG
CGGCACCAGGAGCAGCGGCGGCGGCAGCAGCAGCAGCAGCAGCAGCAGGA
GTCGGTGCCTGGGTTGGGTGGCAGCGGTAGCAAACGAAAACACGCTGCCG
CTGCCGCCGCCGCCGCTGGTGCTGATGGTGCAGGAAGTGCTGCGGGAGGC
GGCGCGGCGCCGTCGACCGTCGGAGGAACGACGGGCAAGACGAGCACTGG
TGGCGGTAAAGGTGGAAAAGTTAACAGTGGAGAAGGACCGGGGGCGGCGA
AGTGGGGAGAGGGACCAGACGCGGTGCCTGGGGGATCTCCGCCGGCAGTG
AAGAAGGCCAAGGGCTCCGGCCGGAAAAATAAGAAAAAAGCTGCGGGGCA
TCGCTCTTGGTAATCGTAATTGTAACTACCGGTGCTACGTATGGTGGTTT
TTTATTCGCTGATATGATTGCGTTGTCATCGGTGGCTGGTGCTCATGTGC
CAAAAAAAAACCCAAGCACATTCTTGCCTGCCGTGTTCGTTTTGAGCAGA
AACTCTTGTTGGTCGGGTCTGACCCATGAACCACACACACGGTAACACGG
GGGGGAGGGGTTGTTTTTTGGGCCTGTCTTCGTTCGGAACCGTAAAAAGT
TTTTGTAGGGCAACACATGCCTCCTACAGTATTACCAGCCAGCACCCAGA
GACGTTCGTGTGGAATTCAAAGAAAAATGTCTCAAGGAGTTGGGTTGCGT
AGTGTTTGATTCCGGTATTATTGAAATGCGAGATGGTGATGGTGCGAATG
AAGGAGAAGGAAGACTTGCTTTCTTGGGTGTTTGTTGTGTGAATATGTCT
CCGTCGCCTGTGATGCGACATATCATCCGCTGTTAGTGATACAGTAGAAG
TGCGCGTTGACTACATGCATTGCGTGCGCCGTGGTCCGTGTTGGTGTTCG
TCAAGTGATCGGGAACAACTCCAAGCCGATGCGTAGTTTGGTGTGAGATG
CATGTGCGCAGGTCGAGAGGACGGACGAGTGTGACTGAGATGCCCGTTTC
AGATTGACCGGGGGTAAATAAAGCGCTCAAAATACATCACGTGTCGCCCA
AATCACCACGAGCATAAATTCGCGCCAGCCACCATCAACCAATCGTCATC
CGATTACTCAAGTAAGCCCACGAAATCGTCATGAGCGCAAACCCCGTGAT
GTTACTATATTTAGCCAGCATTACGAACAAAACTTTTCATCATGGAATAT
CCTAAAAAAAAACGAGGAAG
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Coding sequence (CDS) from alignment at P-littoralis_Contig1:859989..868808+

>mRNA_P-littoralis_Contig1.148.1 ID=mRNA_P-littoralis_Contig1.148.1|Name=mRNA_P-littoralis_Contig1.148.1|organism=Pylaiella littoralis U1_48|type=CDS|length=933bp|location=Sequence derived from alignment at P-littoralis_Contig1:859989..868808+ (Pylaiella littoralis U1_48)
ATGGCGGGTGCTAGCGAGGAGAGCAAAGGCGTGGAGTCGCTGAAGAACTT
CGAACGAGCTCTTGGACATGTGCGCAACAGTGTGCGGCCTTTGACGCTCA
TGAGCCGTGAGGAGGTCGGCACTTGCGTCAGCGCTGCAGACCGCGCCAAG
CTCAACTTGCAGGTGGCCTACGGCGTAAGCTCCCTCTTCTACATGTTTTT
GAAGACGCAGGGGGTTTCGCCTTCGACTCACCCGGTGAAAGCCGAGCTCG
ATCGTATCCGCGGGTACTTCGGGCGGCTGAAGCAGGTGGGAAAGCCGCCG
GAGCAGCGTACCCTCAAGGTCGACGCAGAGGCTAGTCGACGGTTCATAAA
CGCCGCTCTCTCTAGTGACAGCGTCTGGCAGAACGCCAAGGGGACCGACC
CCAAGAGTGCCCAGGAGAGGCGCGCCGCCGCGGGCATCGGACGGAGCAAC
CCGGCCGGGCAGCCAGAGATGATCAACAACACGCTGGAAGCGGCGGCGGC
GGCAGTGTTGGGAACACCAGCAGCGCAGGACACACCGGCGGGAACAACAG
CAAAAAAAGCCGGACGGCAGCGGCACCAGGAGCAGCGGCGGCGGCAGCAG
CAGCAGCAGCAGCAGCAGGAGTCGGTGCCTGGGTTGGGTGGCAGCGGTAG
CAAACGAAAACACGCTGCCGCTGCCGCCGCCGCCGCTGGTGCTGATGGTG
CAGGAAGTGCTGCGGGAGGCGGCGCGGCGCCGTCGACCGTCGGAGGAACG
ACGGGCAAGACGAGCACTGGTGGCGGTAAAGGTGGAAAAGTTAACAGTGG
AGAAGGACCGGGGGCGGCGAAGTGGGGAGAGGGACCAGACGCGGTGCCTG
GGGGATCTCCGCCGGCAGTGAAGAAGGCCAAGGGCTCCGGCCGGAAAAAT
AAGAAAAAAGCTGCGGGGCATCGCTCTTGGTAA
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