mRNA_P-littoralis_Contig198.96.1 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig198.96.1 vs. uniprot
Match: A0A6H5JR14_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JR14_9PHAE) HSP 1 Score: 296 bits (759), Expect = 5.740e-92 Identity = 146/216 (67.59%), Postives = 177/216 (81.94%), Query Frame = 2
Query: 128 RPRYARKKGLDKKAGYITSADDSKLEELMDILRFFEKWRCNLEEKTTLGDVTWKKHFITEYSWTDIRVSILGFVSMCRYLFEDDSRFKVSRLRDTPRYVNPRHHCQDVVENRFGHMRDGLGSHRNPTATQAKERAARGDLNRSLHGRSRANHNRNARRGQDYIASGYRARIMLPITEGERSATMRPSSWNTPAAVLFPRYISYDRPRAAPVVEGSA 775
R YAR+ GLDK+AGYI+SADDSKLEEL++++RFF+KWR +L+EKTT+GD TWKKHFITE+SWTDIRV ILGFVSMCRYLFE+DSRFKVS R P ++N R+ QDV+E+ FGHMR GLGSHRNPTA QAKER ARGD+ R LHG RAN+NRNAR+G+D++ASGYRA +MLP+ EGERS +R + ++ AVL P YIS P A PV +GSA
Sbjct: 554 RSEYARRNGLDKEAGYISSADDSKLEELINMVRFFDKWRSSLQEKTTMGDETWKKHFITEFSWTDIRVCILGFVSMCRYLFEEDSRFKVSPRRPWPHFINQRNCGQDVIEHCFGHMRQGLGSHRNPTAAQAKERGARGDILRGLHGPCRANYNRNARKGRDFVASGYRAEVMLPVGEGERSVRIRARTKDSDEAVLSPWYISVAAPGATPVADGSA 769
BLAST of mRNA_P-littoralis_Contig198.96.1 vs. uniprot
Match: A0A6H5JTX6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JTX6_9PHAE) HSP 1 Score: 226 bits (577), Expect = 6.320e-71 Identity = 127/203 (62.56%), Postives = 146/203 (71.92%), Query Frame = 2
Query: 137 YARKKGLDKKAGYITSADDSKLEELMDILRFFEKWRCNLEEKTTLGDVTWKKHFITEYSWTDIRVSILGFVSMCRYLFEDDSRFKVSRLRDTPRYVNPRHHCQDVVENRFGHMRDGLGSHRNPTATQAKERAARGDLNRSLHGRSRANHNRNARRGQDYIASGYRARIMLPITEGERSATMRPSSWNTPAAVLFPRYISYDRP 745
YARK GLDK GY SADDSKLE LMDILRFF++WR +LE + TLGD WK HFIT++SWTDIRV ILG VSMCRYLFE DSRFK+ L D P ++N R QD+VE+R+GHM LGSH NPTA QAKERAA+ DL RSLHG SRANH AR+G+D+IASG R RIMLP S R ++ A L RY+S D P
Sbjct: 44 YARKNGLDKMVGYTGSADDSKLEGLMDILRFFDEWRASLEARPTLGD--WKAHFITDHSWTDIRVCILGTVSMCRYLFEKDSRFKIYPLSDVPHFINLRCIGQDIVEHRYGHMCQCLGSHCNPTAAQAKERAAQEDLQRSLHGISRANH---ARKGEDFIASGIRGRIMLP------SDRRRAVCYD--AGALEERYLSCDVP 233
BLAST of mRNA_P-littoralis_Contig198.96.1 vs. uniprot
Match: A0A6H5K5I6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K5I6_9PHAE) HSP 1 Score: 168 bits (425), Expect = 1.740e-47 Identity = 98/210 (46.67%), Postives = 136/210 (64.76%), Query Frame = 2
Query: 128 RPRYARKKGLDKKAGYITSADDSKLEELMDILRFFEKWRCNLEEK---TTLGD-VTWKKHFITEYSWTDIRVSILGFVSMCRYLFEDDSRFKVSRLR-DTPRYVNPRHHCQDVVENRFGHMRDGLGSHRNPTATQAKERAARGDLNRSLHGRSRANHNRN--ARRGQDYIASG--YRARIMLPITEGERSATMRPSSWNTPAAVLFPRYI 730
R + RK G K G I S + + ++ L++IL FF+ W+ LE K + GD + WKKHFIT SW D+R+SILGFVSMCRYLFED RF++ L + R+++PR+ QD+ E+RF H+R LG+HRNPTA +AK+R+A GDL R+ +G+ R N +RN AR G D+ G + I+L +T+ E +R NTPA VL PRY+
Sbjct: 69 RSKVDRKDGSKKMVGCIRSFESAPMDRLLEILEFFDDWQSTLERKHIPSGEGDKLGWKKHFITHQSWFDLRLSILGFVSMCRYLFEDPERFQIDSLSPNCRRFLSPRNCSQDICEHRFSHIRAALGTHRNPTAREAKKRSAVGDLCRATNGKRRRNASRNPNARSGGDFEEHGDSEKKAIILAVTKVETGKEVRAWCRNTPAEVLCPRYM 278
BLAST of mRNA_P-littoralis_Contig198.96.1 vs. uniprot
Match: A0A6H5JS87_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JS87_9PHAE) HSP 1 Score: 156 bits (395), Expect = 1.700e-44 Identity = 97/196 (49.49%), Postives = 115/196 (58.67%), Query Frame = 2
Query: 170 GYITSADDSKLEELMDILRFFE----KWRCNLEEKTTLGDVTWKKHFITEYSWTDIRVSILGFVSMCRYLFEDDSRFKVSRLRDTPRYVNPRHHCQDVVENRFGHMRDGLGSHRNPTATQAKERAARGDLNRSLHGRSRANHNRNARRGQDYIASGYRARIMLPITEGERSATMRPSSWNTPAAVLFPRYISYDRP 745
GYI SADDSKLEELMDILRFF+ +WR + T G T S R S G D+VE+R+ HMR LGS+ NPTA QAKERAARGDL RSLHG SRANHN+N R+G+++IASG R RIMLP+T+ ERSATMR S N+ +AV+FPRYIS +P
Sbjct: 3 GYIRSADDSKLEELMDILRFFDDGGPRWRLDRRWATAPGRRT---------SSPTTRGSTSG---------------------------------PDIVEHRYAHMRQSLGSNSNPTAAQAKERAARGDLYRSLHGVSRANHNKNERKGEEFIASGIRGRIMLPVTDAERSATMRAPSRNSVSAVMFPRYISIHKP 156
BLAST of mRNA_P-littoralis_Contig198.96.1 vs. uniprot
Match: A0A6H5K5X1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K5X1_9PHAE) HSP 1 Score: 152 bits (385), Expect = 8.400e-39 Identity = 76/112 (67.86%), Postives = 90/112 (80.36%), Query Frame = 2
Query: 446 DVVENRFGHMRDGLGSHRNPTATQAKERAARGDLNRSLHGRSRANHNRNARRGQDYIASGYRARIMLPITEGERSATMRPSSWNTPAAVLFPRYISYDRPRAAPVVEGSASQ 781
D+ E+R+GHM GLGSH NPT +AKERA RGDL RSLHG SRA HN+NAR+G+D+IASG R RI+LP+T+ ERSATMR S N +AV+FPRYIS D+P A PVV GSASQ
Sbjct: 530 DIEEHRYGHMHQGLGSHSNPTCAEAKERAERGDLQRSLHGVSRAKHNQNARKGEDFIASGIRGRIILPVTDAERSATMRAPSKNPASAVMFPRYISIDKPHADPVVGGSASQ 641
BLAST of mRNA_P-littoralis_Contig198.96.1 vs. uniprot
Match: A0A6H5K630_9PHAE (Uncharacterized protein n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K630_9PHAE) HSP 1 Score: 139 bits (351), Expect = 2.730e-38 Identity = 72/103 (69.90%), Postives = 83/103 (80.58%), Query Frame = 2
Query: 473 MRDGLGSHRNPTATQAKERAARGDLNRSLHGRSRANHNRNARRGQDYIASGYRARIMLPITEGERSATMRPSSWNTPAAVLFPRYISYDRPRAAPVVEGSASQ 781
MR GLGSHRNPTATQAKERAARGDLNR L G SRANHNR +R+G D+IASG R +I+LP+T+ ERSATMR S N +AV+F RY+S +PRA P VEG ASQ
Sbjct: 1 MRQGLGSHRNPTATQAKERAARGDLNRGLRGGSRANHNRTSRKGSDFIASGVRGQIILPVTDEERSATMRAPSRNPASAVMFSRYLSVVKPRADPTVEGGASQ 103
BLAST of mRNA_P-littoralis_Contig198.96.1 vs. uniprot
Match: A0A6H5L2C2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L2C2_9PHAE) HSP 1 Score: 140 bits (352), Expect = 6.640e-38 Identity = 70/101 (69.31%), Postives = 83/101 (82.18%), Query Frame = 2
Query: 443 QDVVENRFGHMRDGLGSHRNPTATQAKERAARGDLNRSLHGRSRANHNRNARRGQDYIASGYRARIMLPITEGERSATMRPSSWNTPAAVLFPRYISYDRP 745
+D VE+RFGH R GLGSHRNPTATQAKERAARGDLNR L G SRANHNR +R+G D+IASG R +I+LP+T+ ERSATMR S N +AV+FPRY+S +P
Sbjct: 66 RDPVEHRFGHTRQGLGSHRNPTATQAKERAARGDLNRGLQGGSRANHNRTSRKGNDFIASGVRGQIILPVTDEERSATMRAPSRNPASAVMFPRYLSVVKP 166
BLAST of mRNA_P-littoralis_Contig198.96.1 vs. uniprot
Match: A0A6H5K7Z3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K7Z3_9PHAE) HSP 1 Score: 142 bits (358), Expect = 5.120e-35 Identity = 79/181 (43.65%), Postives = 108/181 (59.67%), Query Frame = 2
Query: 143 RKKGLDKKAGYITSADDSKLEELMDILRFFEKWRCNLEEKTTLGDVTWKKHFITEYSWTDIRVSILGFVSMCRYLFEDDSRFKVSRLRDTPRYVNPRHHCQDVVENRFGHMRDGLGSHRNPTATQAKERAARGDLNRSLHGRSRANHNRNARRGQDY-IASGYRARIMLPITEGERSATMR 682
RK+G +K+ GYIT AD L L++IL FF+ W+ +LE G W HFIT+YSWTD+R +ILGFV+MCRY+F+D+ L R++ PR QD++E+RF H+R G G+H+NPTA QA E A GD R HG R N +R+A G + + R P ER+ +R
Sbjct: 483 RKQGGNKRKGYITGADSPLLGRLLEILEFFDSWQVSLEAH--FGPKEWANHFITDYSWTDMRTTILGFVAMCRYVFKDED------LVSGGRFLYPRMFSQDILEHRFAHIRSGRGTHKNPTAMQAIEAARAGDTARMFHGTRRRNSSRSA--GMAFQLEDSQGVRAAFPANASERAQVVR 653
BLAST of mRNA_P-littoralis_Contig198.96.1 vs. uniprot
Match: A0A6H5KB63_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KB63_9PHAE) HSP 1 Score: 129 bits (324), Expect = 1.110e-34 Identity = 65/91 (71.43%), Postives = 74/91 (81.32%), Query Frame = 2
Query: 473 MRDGLGSHRNPTATQAKERAARGDLNRSLHGRSRANHNRNARRGQDYIASGYRARIMLPITEGERSATMRPSSWNTPAAVLFPRYISYDRP 745
MR LGSH NP A QAKER ARGDL RSLHG SRANHN+NAR+G+D+IASG R RIMLP+T+ ERSATMR S N +AV+FPRYIS D+P
Sbjct: 1 MRQSLGSHSNPIAAQAKERTARGDLQRSLHGVSRANHNKNARKGEDFIASGIRGRIMLPVTDAERSATMRAPSRNPVSAVMFPRYISIDKP 91
BLAST of mRNA_P-littoralis_Contig198.96.1 vs. uniprot
Match: A0A6H5JRH8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JRH8_9PHAE) HSP 1 Score: 140 bits (354), Expect = 2.730e-34 Identity = 67/108 (62.04%), Postives = 81/108 (75.00%), Query Frame = 2
Query: 137 YARKKGLDKKAGYITSADDSKLEELMDILRFFEKWRCNLEEKTTLGDVTWKKHFITEYSWTDIRVSILGFVSMCRYLFEDDSRFKVSRLRDTPRYVNPRHHCQDVVEN 460
YARK GLDK YI SADDSKLEE+MDIL F++WR +LE + TLGD WK HFIT++SWTDIRV ILG VSMCRY+FE+DS FK+ L D P ++N R+ Q +N
Sbjct: 434 YARKNGLDKMVSYIRSADDSKLEEVMDILLLFDEWRASLEARPTLGDGAWKAHFITDHSWTDIRVCILGTVSMCRYVFEEDSTFKIPPLSDVPHFINLRYIGQASQKN 541 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig198.96.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 19
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig198.96.1 >prot_P-littoralis_Contig198.96.1 ID=prot_P-littoralis_Contig198.96.1|Name=mRNA_P-littoralis_Contig198.96.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=252bp MLSTPEKDEGGPRTRSHTTPTTSDRALESDRCAPRPRYARKKGLDKKAGYback to top mRNA from alignment at P-littoralis_Contig198:429281..431247+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig198.96.1 ID=mRNA_P-littoralis_Contig198.96.1|Name=mRNA_P-littoralis_Contig198.96.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=1967bp|location=Sequence derived from alignment at P-littoralis_Contig198:429281..431247+ (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig198:429281..431247+ >mRNA_P-littoralis_Contig198.96.1 ID=mRNA_P-littoralis_Contig198.96.1|Name=mRNA_P-littoralis_Contig198.96.1|organism=Pylaiella littoralis U1_48|type=CDS|length=756bp|location=Sequence derived from alignment at P-littoralis_Contig198:429281..431247+ (Pylaiella littoralis U1_48)back to top |