mRNA_P-littoralis_Contig198.69.1 (mRNA) Pylaiella littoralis U1_48

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-littoralis_Contig198.69.1
Unique NamemRNA_P-littoralis_Contig198.69.1
TypemRNA
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Homology
BLAST of mRNA_P-littoralis_Contig198.69.1 vs. uniprot
Match: D8LDN4_ECTSI (Protein kinase domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LDN4_ECTSI)

HSP 1 Score: 385 bits (988), Expect = 7.220e-117
Identity = 233/407 (57.25%), Postives = 272/407 (66.83%), Query Frame = 1
Query:  547 QVSCLEGEVMRIPLSGKTVPFRVVKRRGRGFSSVVFECEREEKDSGGTVMEQDEGQGGGAGVLQVVTVKVMSGGKSGMGACLHEVETLAFLKVKREEAGLTQDRSRFAELASWFYKRSAAGGVDHVCLVFRGGGVSLREAMSARSPPPFGSPGGVKHGGTGGSSSPSPSTASSPPSLAWGAQEVVEVARGLLEGIAFLHSVGLIHADIKPENVALYPPPQPSPSSALTADRADP------APFDLRLIDLGNAVFAAEAVPGVTAGTPSYLSPEAREGLPWGPAVDVWAVGCIMYEIITGARVGAAGAGDTVPGGSSTYSGXXXXXXXXXXXDREVIGRGGDCGVDNGGVGAFEGVGVARGPDVRAGSGGASTRGVTAAVVGLMERLLTEDPDRRPSAAEALKGAIF 1749
            QVS   GEVM +PL+GK+VPFRVVKRR +GF+SVVFEC  E++++ G    +          L+VVTVKV+SGG+SGMGACLHEVETLAFLKVKR+EAGLT++RSRFAELASWFY+RSA GGVDHVCLVFRGGG+SLREAMSARSPP       +    +G ++S  PS+A  P  LAW A EVVEVARGLLEGIAFLHSVGL+HADIKP+NVALYP                       APFDLRLIDLGNAVFA++ VPGVTAGTPSYLSPEA  GL WGP VDVWAVGC+++EI+TG RVGAA A                            IG  G  G  +G   +    G++    + AGSG   T      VVGL++RLL ED   RPSA EALK  +F
Sbjct:   80 QVSMNVGEVMSVPLAGKSVPFRVVKRRSKGFNSVVFECREEQEEAMGDEAYRP---------LRVVTVKVLSGGESGMGACLHEVETLAFLKVKRQEAGLTRERSRFAELASWFYRRSAVGGVDHVCLVFRGGGLSLREAMSARSPP-------ISTAQSGVTASNMPSSA--PVLLAWKAHEVVEVARGLLEGIAFLHSVGLVHADIKPDNVALYPXXXXXXXXXXXXXXXXXXXXXAQAPFDLRLIDLGNAVFASDTVPGVTAGTPSYLSPEASGGLAWGPPVDVWAVGCVLHEILTGGRVGAAAA--------------------------FTIGNEGRGGDSSGCATSGPSAGLSASAGLSAGSGPELT-----GVVGLVKRLLAEDVGVRPSAEEALKDVVF 437          
BLAST of mRNA_P-littoralis_Contig198.69.1 vs. uniprot
Match: A0A7S3UQ19_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3UQ19_HETAK)

HSP 1 Score: 90.9 bits (224), Expect = 1.910e-15
Identity = 79/261 (30.27%), Postives = 117/261 (44.83%), Query Frame = 1
Query:  742 VTVKVMSGGKSGMGACLHEVETLAFLKVKREEAGLTQDRSR-----FAELASWFYKRSAAGGVDHVCLVFRGGGVSLREAMSARSPPPFGSPGGVKHGGTGGSSSPSPSTASSPPSLAWGAQEVVEVARGLLEGIAFLHSVGLIHADIKPENVALYP-----PPQPSPSSALTADRADPAPFDLRLIDLGNAVF------------AAEAVP-----GVTAGTPSYLSPEAREGLPWGPAVDVWAVGCIMYEIITGARVGA 1443
            VT+KV   G       L EVE L +L +K   AG   D        FA L +W    +    ++ + LVF GGGVSLR+ + ++S          +H                       A+EV+E+   L+ G+ F H++GLIH DIKPEN+ L P     P + +   +L       A F ++ ID G+A F              EA+P      +   T SY +PE  E   W   +DVW++GC+++E + G +V A
Sbjct:   19 VTIKVYEVGDRWKSLGLKEVEILTYLHLK---AGYKNDEDGKNSLFFAPLVAWREDPT----LNTLFLVFPGGGVSLRDFLESQS----------EH---------------------LQAEEVLELFHCLVLGLDFFHNLGLIHTDIKPENIILTPAAAAVPARATQQQSLNLVTLRGALFRVQYIDFGSATFENATLNPENTNSCDEAMPTPPVHNMLVSTRSYRAPEVNENKCWSYGIDVWSLGCVVFETLFGQKVSA 241          
BLAST of mRNA_P-littoralis_Contig198.69.1 vs. uniprot
Match: A0A5J4XTC6_9CHLO (Serine threonine-kinase AFC3-like n=1 Tax=Trebouxia sp. A1-2 TaxID=2608996 RepID=A0A5J4XTC6_9CHLO)

HSP 1 Score: 87.4 bits (215), Expect = 5.190e-14
Identity = 71/234 (30.34%), Postives = 101/234 (43.16%), Query Frame = 1
Query:  742 VTVKVMSGGKSGMGACLHEVETLAFLKVKREEAGLTQDRSRFAELASWFYKRSAAGGVDHVCLVFRGGGVSLREAMSARSPPPFGSPGGVKHGGTGGSSSPSPSTASSPPSLAWGAQEVVEV-ARGLLEGIAFLHSVGLIHADIKPENVALYP----PPQPSPSSALTADRADPAPFDLRLIDLGNAVFAAEAVPGVTAGTPSYLSPEAREGLPWGPAVDVWAVGCIMYEIITG 1428
            V +K++   K    A + E+E L  L     E    Q+R     L  WF  R       HVC+VF   G+SL + +      PF                                 +VV    R LLE +A+LH + LIH D+KPEN+ L         P+P    TA R  P+  D+++ID G+A F+ E        T  Y +PE   GL W    D+W++GCI+ E++TG
Sbjct:  131 VAIKIVRNVKKYRDAAMIELEVLNTL-----EKNDPQNRWHCVHLQEWFDYRG------HVCMVFEKLGLSLYDFLRVNQYRPF-------------------------------RIDVVRAFGRQLLESVAYLHGLDLIHTDLKPENILLAACDDDRKSPTPGIRKTAPR-QPSTSDIKVIDFGSATFS-EQYHSTIVSTRHYRAPEVILGLGWSFEADIWSIGCILVELVTG 320          
BLAST of mRNA_P-littoralis_Contig198.69.1 vs. uniprot
Match: UPI00192225A6 (serine/threonine-protein kinase AFC2-like isoform X1 n=2 Tax=Hibiscus syriacus TaxID=106335 RepID=UPI00192225A6)

HSP 1 Score: 85.9 bits (211), Expect = 1.490e-13
Identity = 81/286 (28.32%), Postives = 123/286 (43.01%), Query Frame = 1
Query:  598 TVPFRVVKRRGRGFSSVVFEC-EREEKDSGGTVMEQDEGQGGGAGVLQVVTVKVMSGGKSGMGACLHEVETLAFLKVKREEAGLTQDRSRFAELASWFYKRSAAGGVDHVCLVFRGGGVSLREAMSARSPPPFGSPGGVKHGGTGGSSSPSPSTASSPPSLAWGAQEVVEVARGLLEGIAFLHSVGLIHADIKPENVALYPPP------QPSPSSAL--TADRADPAPFDLRLIDLGNAVFAAEAVPGVTAGTPSYLSPEAREGLPWGPAVDVWAVGCIMYEIITG 1428
            T  +++ ++ G G    V EC +RE K+                    +V +KV+   K    A + E+E L +L       G      R  +L +WF  R      +H+C+VF   G SL + +   +  PF                        P  L      V E+ R LLE +AF+H + LIH D+KPEN+    P       +    SA+  T  R  P    +++IDLG+AVF  +    + + T  Y +PE   GL WG   D+W+VGCI+ E+ +G
Sbjct:   94 TSRYKIYRKVGEGTFGQVLECLDRETKE--------------------MVAIKVVRSIKKYREAAMMELEVLQYLGKHDRNGG------RCVQLLNWFDYR------NHICIVFEMLGPSLYDFLQKNNYRPF------------------------PVDL------VRELGRQLLECVAFIHDLHLIHTDLKPENILFVSPEYVKIPDEVISCSAIRDTCHRRLPKSSAIKVIDLGSAVFEHQDHNYIVS-TRHYRAPEVILGLGWGYPCDLWSVGCILVELCSG 316          
BLAST of mRNA_P-littoralis_Contig198.69.1 vs. uniprot
Match: A0A0H5QHK7_9EUKA (Protein kinase domain-containing protein n=1 Tax=Spongospora subterranea TaxID=70186 RepID=A0A0H5QHK7_9EUKA)

HSP 1 Score: 85.9 bits (211), Expect = 1.530e-13
Identity = 83/278 (29.86%), Postives = 110/278 (39.57%), Query Frame = 1
Query:  607 FRVVKRRGRGFSSVVFECEREEKDSGGTVMEQDEGQGGGAGVLQVVTVKVMSGGKSGMGACLHEVETLAFLKVKREEAGLTQDRSRFAELASWFYKRSAAGGVDHVCLVFRGGGVSLREAMSARSPPPFGSPGGVKHGGTGGSSSPSPSTASSPPSLAWGAQEVVEVARGLLEGIAFLHSVGLIHADIKPENVALYPPPQPSPSSALT----ADRADPAPFDLRLIDLGNAVFAAEAVPGVTAGTPSYLSPEAREGLPWGPAVDVWAVGCIMYEIITG 1428
            + +V   G+G    V EC           ++ + G       ++ V VK +   +  + A   E+E L FL  K      T ++S    L SWF  R      +HV LVF   G  L   M               HG                    +    V   AR LL+ + F HSV L H D+KPENV L        SS  T    + R  P   D+RLID G A F  E     T  T  Y +PE   GLPW    D+W++GCI  E++TG
Sbjct:   78 YEIVCVAGQGTFGTVLEC-----------LDHEHG-------MERVAVKAVRSVERYLDAASIEIEILQFLSAKD-----THNKSLCVRLLSWFSARHHHR--EHVFLVFEYLGRDLYTFMKRNG----------HHG--------------------FSLDHVRSFARQLLQAVQFCHSVKLCHTDLKPENVLLC-------SSDYTVCQVSSRRIPVSTDIRLIDFGGATFENERH-SRTIATRQYRAPEVILGLPWSYPSDIWSLGCIFVELLTG 292          
BLAST of mRNA_P-littoralis_Contig198.69.1 vs. uniprot
Match: A0A835LH45_9MAGN (Protein kinase domain-containing protein n=3 Tax=Coptis chinensis TaxID=261450 RepID=A0A835LH45_9MAGN)

HSP 1 Score: 82.8 bits (203), Expect = 6.880e-13
Identity = 74/275 (26.91%), Postives = 115/275 (41.82%), Query Frame = 1
Query:  607 FRVVKRRGRGFSSVVFEC-EREEKDSGGTVMEQDEGQGGGAGVLQVVTVKVMSGGKSGMGACLHEVETLAFLKVKREEAGLTQDRSRFAELASWFYKRSAAGGVDHVCLVFRGGGVSLREAMSARSPPPFGSPGGVKHGGTGGSSSPSPSTASSPPSLAWGAQEVVEVARGLLEGIAFLHSVGLIHADIKPENVALYPPPQPSPSSALTADRADPAPFDLRLIDLGNAVFAAEAVPGVTAGTPSYLSPEAREGLPWGPAVDVWAVGCIMYEIITG 1428
            ++++ + G G    V EC +RE +D                     V VKV+        A + E+  L FL  K E++ +        ++ SWF         +HVC+VF   G SL +     +  P+       H                          V E  R LLE +A++H + L+H D+KPEN+ L        SS     R +P    ++LID G+++F  E    + + T  Y +PE   GL W    D+W+VGCI++E+ TG
Sbjct:   31 YKILDKMGEGTFGQVLECWDRERQD--------------------YVAVKVVRSIPKYRDAAMMEINILEFLG-KHEDSDM-----HCVQIRSWFEYN------NHVCIVFEKLGPSLYDFQRKNNRCPY-------H-----------------------IDLVKEFGRQLLESVAYVHDLKLVHTDLKPENILLVSSEYVRISSRYNG-RWEPKESKIKLIDFGSSIFEDEHHSSIVS-TREYRAPEVILGLGWSYPCDIWSVGCILFELCTG 241          
BLAST of mRNA_P-littoralis_Contig198.69.1 vs. uniprot
Match: A0A0L9TQA5_PHAAN (Protein kinase domain-containing protein n=2 Tax=Vigna TaxID=3913 RepID=A0A0L9TQA5_PHAAN)

HSP 1 Score: 83.2 bits (204), Expect = 1.130e-12
Identity = 78/285 (27.37%), Postives = 120/285 (42.11%), Query Frame = 1
Query:  598 TVPFRVVKRRGRGFSSVVFEC-EREEKDSGGTVMEQDEGQGGGAGVLQVVTVKVMSGGKSGMGACLHEVETLAFLKVKREEAGLTQDRSRFAELASWFYKRSAAGGVDHVCLVFRGGGVSLREAMSARSPPPFGSPGGVKHGGTGGSSSPSPSTASSPPSLAWGAQEVVEVARGLLEGIAFLHSVGLIHADIKPENVALYPPPQPSPSSALTADRADPAPFD-------LRLIDLGNAVFAAEAVPGVTAGTPSYLSPEAREGLPWGPAVDVWAVGCIMYEIITG 1428
            T  +R+  + G G    V EC +RE KD                    +V +K++ G K    A + E++ L  L  K ++ G     +R  ++ +WF  R      +H+C+VF   G SL + +   +   F                        P  L      V E+ R LLE IAF+H + +IH D+KPEN+ L  P         +  R+  + F        ++LID G+  F  E    + + T  Y +PE   GL W    D+W+VGCI+ E+ TG
Sbjct:  117 TSRYRIHSKMGEGTFGKVLECWDRERKD--------------------MVAIKIIRGIKKYREAAMIEIQVLEQLG-KHDKGG-----NRCVQIRNWFDYR------NHICIVFEKLGPSLYDFLRKNNYRSF------------------------PIDL------VREIGRQLLECIAFMHDLRMIHTDLKPENILLVSPEYVKVPDYKSTTRSPGSYFKRVPKSSAIKLIDFGSTTFEREDQNYIVS-TRHYRAPEVILGLGWSYPCDIWSVGCILVELCTG 338          
BLAST of mRNA_P-littoralis_Contig198.69.1 vs. uniprot
Match: UPI00053C46F6 (serine/threonine-protein kinase AFC3 isoform X1 n=2 Tax=Tarenaya hassleriana TaxID=28532 RepID=UPI00053C46F6)

HSP 1 Score: 82.0 bits (201), Expect = 1.910e-12
Identity = 77/284 (27.11%), Postives = 119/284 (41.90%), Query Frame = 1
Query:  598 TVPFRVVKRRGRGFSSVVFEC-EREEKDSGGTVMEQDEGQGGGAGVLQVVTVKVMSGGKSGMGACLHEVETLAFLKVKREEAGLTQDRSRFAELASWFYKRSAAGGVDHVCLVFRGGGVSLREAMSARSPPPFGSPGGVKHGGTGGSSSPSPSTASSPPSLAWGAQEVVEVARGLLEGIAFLHSVGLIHADIKPENVALYPPP------QPSPSSALTADRADPAPFDLRLIDLGNAVFAAEAVPGVTAGTPSYLSPEAREGLPWGPAVDVWAVGCIMYEIITG 1428
            T  ++++ + G G    V EC +R+ K+                     V +KV+   K    A + EV+ L   K+ + + G    RSR  ++  WF  R      +H+C+VF   G SL + +      PF                        P +L      V +  R LLE +A++H + LIH D+KPEN+ L              +S  T  R  P    ++LID G+ V     + G    T  Y +PE   G+ W  + D+W+VGCI+YE+ TG
Sbjct:   60 TPRYKILSKMGEGTFGRVLECWDRQTKE--------------------YVAIKVVRSIKKYRDAAMIEVDVLQ--KLAKNDKG----RSRCVQIKDWFDYR------NHICIVFEKLGPSLFDFLKRNKYSPF------------------------PLAL------VRDFGRQLLESVAYMHDLKLIHTDLKPENILLVSSEYVKLMDHKRSASDETHFRCLPKSSAIKLIDFGSTVCD-NRIHGSIVQTRHYRAPEVILGVGWSYSCDLWSVGCILYELCTG 280          
BLAST of mRNA_P-littoralis_Contig198.69.1 vs. uniprot
Match: A0A218XZV8_PUNGR (serine/threonine-protein kinase AFC2-like isoform X1 n=2 Tax=Punica granatum TaxID=22663 RepID=A0A218XZV8_PUNGR)

HSP 1 Score: 82.4 bits (202), Expect = 1.970e-12
Identity = 75/287 (26.13%), Postives = 121/287 (42.16%), Query Frame = 1
Query:  598 TVPFRVVKRRGRGFSSVVFECEREEKDSGGTVMEQDEGQGGGAGVLQVVTVKVMSGGKSGMGACLHEVETLAFLKVKREEAGLTQDRSRFAELASWFYKRSAAGGVDHVCLVFRGGGVSLREAMSARSPPPFGSPGGVKHGGTGGSSSPSPSTASSPPSLAWGAQEVVEVARGLLEGIAFLHSVGLIHADIKPENVALYPPP----------QPSPSSALTADRADPAPFDLRLIDLGNAVFAAEAVPGVTAGTPSYLSPEAREGLPWGPAVDVWAVGCIMYEIITG 1428
            T  +++  + G G    V EC  +EK                    ++V +K++ G      A + E++ L   K+ R +    +D +R  ++ +WF  R      +H+C+VF   G S+ + +   S   F                        P  +      V E+ R LLE +AF+H + LIH D+KPEN+ L  P             SP S+    R  P    +++ID G+ V+ +      T  T  Y +PE   GL W  + D+W+VGCI+ E+ TG
Sbjct:   95 TSRYKIHSKMGEGTFGQVLECWDKEKK-------------------EMVAIKIVRGVSKYREAAMIEIDVLQ--KLGRHD----KDGNRCVQIRNWFDYR------NHICIVFEKLGPSIYDFLQKNSYRSF------------------------PIDI------VREIGRQLLECVAFMHELHLIHTDLKPENILLVSPEYVKVPEYRSTSRSPESSSYFKRV-PKSSAIKVIDFGSTVYESRDQ-DYTVSTRHYRAPEVILGLGWNYSCDIWSVGCILVELCTG 318          
BLAST of mRNA_P-littoralis_Contig198.69.1 vs. uniprot
Match: A0A4P1RNR3_LUPAN (Protein kinase domain-containing protein n=3 Tax=Lupinus TaxID=3869 RepID=A0A4P1RNR3_LUPAN)

HSP 1 Score: 82.0 bits (201), Expect = 1.980e-12
Identity = 78/297 (26.26%), Postives = 125/297 (42.09%), Query Frame = 1
Query:  562 EGEVMRIPLSGKTVPFRVVKRRGRGFSSVVFEC-EREEKDSGGTVMEQDEGQGGGAGVLQVVTVKVMSGGKSGMGACLHEVETLAFLKVKREEAGLTQDRSRFAELASWFYKRSAAGGVDHVCLVFRGGGVSLREAMSARSPPPFGSPGGVKHGGTGGSSSPSPSTASSPPSLAWGAQEVVEVARGLLEGIAFLHSVGLIHADIKPENVALY-------PPPQPSPSSALTADRADPAPFDLRLIDLGNAVFAAEAVPGVTAGTPSYLSPEAREGLPWGPAVDVWAVGCIMYEIITG 1428
            EG  + +     T  ++++ + G G    V EC +R+ K+                     V VKV+   +    A + EV+ L   ++ + + G     SR  ++ +WF  R      +H+C+VF   G SL + +      PF                        P  L      V E  R LLE +A++H + LIH D+KPEN+ L        P  +   SS  T  R  P    ++LID G+A F  ++   + + T  Y +PE   GL W    D+W++GCI+ E+ +G
Sbjct:   51 EGHYVFVLGENITPRYKILSKMGEGTFGQVLECWDRQTKE--------------------YVAVKVIRSTRKYRDAAMLEVDVLQ--QIAKNDRG----NSRCVQMRNWFDYR------NHICIVFEKLGPSLFDFLKRNKYCPF------------------------PVDL------VREFGRQLLESVAYMHELHLIHTDLKPENILLVSSEYVKLPSCKKRVSSDETQFRCLPKSSAIKLIDFGSAAFDNQSHSSIVS-TRHYRAPEIILGLGWSYPCDLWSIGCILIELCSG 284          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig198.69.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LDN4_ECTSI7.220e-11757.25Protein kinase domain-containing protein n=2 Tax=E... [more]
A0A7S3UQ19_HETAK1.910e-1530.27Hypothetical protein (Fragment) n=1 Tax=Heterosigm... [more]
A0A5J4XTC6_9CHLO5.190e-1430.34Serine threonine-kinase AFC3-like n=1 Tax=Trebouxi... [more]
UPI00192225A61.490e-1328.32serine/threonine-protein kinase AFC2-like isoform ... [more]
A0A0H5QHK7_9EUKA1.530e-1329.86Protein kinase domain-containing protein n=1 Tax=S... [more]
A0A835LH45_9MAGN6.880e-1326.91Protein kinase domain-containing protein n=3 Tax=C... [more]
A0A0L9TQA5_PHAAN1.130e-1227.37Protein kinase domain-containing protein n=2 Tax=V... [more]
UPI00053C46F61.910e-1227.11serine/threonine-protein kinase AFC3 isoform X1 n=... [more]
A0A218XZV8_PUNGR1.970e-1226.13serine/threonine-protein kinase AFC2-like isoform ... [more]
A0A4P1RNR3_LUPAN1.980e-1226.26Protein kinase domain-containing protein n=3 Tax=L... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig198contigP-littoralis_Contig198:348664..354137 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Pylaiella littoralis U1_48 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog2880.D8LDN4
PFAMsPkinase
Model size4636
Max annot lvl2759|Eukaryota
KEGG koko:K08287
Hectar predicted targeting categoryother localisation
Exons3
Evalue3.48e-127
EggNOG OGsKOG0667@1|root,KOG0671@2759|Eukaryota
Ec32 ortholog descriptionSerine/threonine/dual specificity protein kinase, catalytic domain
Ec32 orthologEc-19_001330.1
EC2.7.12.1
Descriptionprotein serine/threonine/tyrosine kinase activity
Cds size1563
COG categoryQ
BRITEko00000,ko01000
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789949.6017306-UTR-P-littoralis_Contig198:348663..3515381680789949.6017306-UTR-P-littoralis_Contig198:348663..351538Pylaiella littoralis U1_48UTRP-littoralis_Contig198 348664..351538 -
1680789949.6412632-UTR-P-littoralis_Contig198:353939..3541371680789949.6412632-UTR-P-littoralis_Contig198:353939..354137Pylaiella littoralis U1_48UTRP-littoralis_Contig198 353940..354137 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789949.6124334-CDS-P-littoralis_Contig198:351538..3521741680789949.6124334-CDS-P-littoralis_Contig198:351538..352174Pylaiella littoralis U1_48CDSP-littoralis_Contig198 351539..352174 -
1680789949.6211464-CDS-P-littoralis_Contig198:352510..3528821680789949.6211464-CDS-P-littoralis_Contig198:352510..352882Pylaiella littoralis U1_48CDSP-littoralis_Contig198 352511..352882 -
1680789949.632244-CDS-P-littoralis_Contig198:353384..3539391680789949.632244-CDS-P-littoralis_Contig198:353384..353939Pylaiella littoralis U1_48CDSP-littoralis_Contig198 353385..353939 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig198.69.1prot_P-littoralis_Contig198.69.1Pylaiella littoralis U1_48polypeptideP-littoralis_Contig198 351539..353939 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-littoralis_Contig198.69.1

>prot_P-littoralis_Contig198.69.1 ID=prot_P-littoralis_Contig198.69.1|Name=mRNA_P-littoralis_Contig198.69.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=521bp
MDAMETDDVGNTSGTPSTMPVVAVTSKRKSFRMSESSPPTPSLTQEVQGG
VFTCATATAATQCIPASIGGDKEAYIRASSRNPQQQQQIQQQQQQQQQQQ
QQQEQHQHQRKRDISIQVSCLEGEVMRIPLSGKTVPFRVVKRRGRGFSSV
VFECEREEKDSGGTVMEQDEGQGGGAGVLQVVTVKVMSGGKSGMGACLHE
VETLAFLKVKREEAGLTQDRSRFAELASWFYKRSAAGGVDHVCLVFRGGG
VSLREAMSARSPPPFGSPGGVKHGGTGGSSSPSPSTASSPPSLAWGAQEV
VEVARGLLEGIAFLHSVGLIHADIKPENVALYPPPQPSPSSALTADRADP
APFDLRLIDLGNAVFAAEAVPGVTAGTPSYLSPEAREGLPWGPAVDVWAV
GCIMYEIITGARVGAAGAGDTVPGGSSTYSGGSGAGDGVLGGDREVIGRG
GDCGVDNGGVGAFEGVGVARGPDVRAGSGGASTRGVTAAVVGLMERLLTE
DPDRRPSAAEALKGAIFLRA*
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mRNA from alignment at P-littoralis_Contig198:348664..354137-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-littoralis_Contig198.69.1 ID=mRNA_P-littoralis_Contig198.69.1|Name=mRNA_P-littoralis_Contig198.69.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=5474bp|location=Sequence derived from alignment at P-littoralis_Contig198:348664..354137- (Pylaiella littoralis U1_48)
TCACCTACCATTGCTCCCCCTCAAGACCCAAGACGTACCGCCACCCTTTC ACACGGCGAGCGCGCTCGCTCTCTCTACCCCAGCCGAAGAATGGTCGACG ACCGCTAGGGAATACTGACGGCTGTGGTCTTCCACTTCACTAGCTATTGC CAAAACTACACTAACGTCGGCGTCTCAACAACAACAGCATCAGGCAAGAT GGATGCAATGGAAACGGACGACGTCGGAAACACCTCGGGTACCCCCTCTA CCATGCCTGTTGTGGCTGTGACTTCCAAGCGAAAGAGCTTCAGGATGAGC GAGTCTTCCCCGCCGACACCCTCGCTGACACAAGAAGTACAGGGTGGAGT GTTCACCTGCGCCACCGCCACCGCCGCTACCCAGTGCATCCCCGCTTCGA TTGGAGGAGATAAAGAGGCTTACATCCGAGCCAGCTCTCGAAACCCCCAG CAGCAACAACAGATACAACAGCAACAGCAACAGCAACAGCAACAGCAACA GCAACAAGAGCAACACCAGCATCAGAGGAAGAGAGATATTTCGATCCAAG TCTCCTGTCTCGAGGGAGAGGTCATGCGCATCCCTCTGTCGGGGAAGACG GTTCCCTTTCGGGTCGTCAAGAGACGCGGTCGAGGCTTCTCCAGCGTGGT GTTTGAGTGTGAGCGCGAGGAAAAGGATTCGGGGGGAACTGTGATGGAGC AGGATGAGGGCCAAGGAGGAGGAGCGGGTGTTCTGCAGGTCGTTACTGTC AAGGTGTGGTTCGTTGAATTGTGGTTGTGGTTGTGGTTGTGGTTGTGGTT GTTGTCGTCTGTTTGTGGTGGTGTTGTTGTTGTTCTTGTTGTTGTTCTTG TTCTTGTTGTTCTTGTTGTTTTTCTTGTCTTGCTTTTTGAACCGTTCCGT CCTCTAGACTATCCGTCGGTTCCACATTCAGTACTGCGCCAACTTTTGAG CGAACGTATGCCACATATCGGCAGTTTTTCACACAGCAGTGCCACACAGA CAGCAGTGGTTAGTTTACCGTGTTAGTTTTATTCTTATTTGAACTTACTG TTCGCCGTGTACACTTCTGTTGTTGTGTTTACAGCAGTATCACGGTTGTA ACGGTGAATATGTTAGAATGGTCTCTTGTCATATCCTGCTCCTTTTTTTC AAAGCTACACCCCCGTGATCTGTGTTCTGCTGCAGTGTGCATAATCTTTT AACAACAAGCGTCGCCCAAACACCCTTCTCACCGGCACTGAATGCACACG CACAGGTCATGTCCGGGGGAAAGTCCGGCATGGGTGCATGCCTCCACGAG GTAGAAACCCTCGCTTTTCTCAAGGTCAAGCGAGAAGAGGCGGGCTTGAC GCAAGATCGGTCGCGCTTCGCCGAGCTAGCCTCGTGGTTCTATAAGCGGT CCGCAGCGGGTGGAGTGGACCACGTCTGTCTGGTTTTCCGCGGGGGAGGC GTGTCTCTCCGTGAAGCGATGTCTGCAAGATCGCCGCCGCCCTTCGGCAG CCCGGGGGGCGTGAAGCACGGCGGCACCGGTGGGTCATCGTCGCCGTCGC CGTCGACGGCGTCGTCTCCTCCTTCGCTGGCATGGGGCGCTCAGGAGGTG GTGGAGGTTGCGCGTGGTCTACTAGAGGTGCGTACGTGCGCGTTTGATTC GTCGCCCCCGACCGTGCCCCTCCCCCCCCCCTGTTTCGTGTTGAGGGAAG GACTTGGACGGCGTTTTTGCCGTGGGAGTGATTTTTTTGTGCGGAGGGAT CGAAATTGAAGTGTTGTGAGATGCCAACTGGCTGGTGCTGCTGGTGCTGC TGCTGCTGCTTCTAGGGCTGAATCTGGTTTTGTCGTAGGTGGTGAGCTAC CATCGACCCCGCACACAGACAGCGACTCCTTCACTGTTCCATGCTTCTAT GCTCACTTTCTGCCGATGAACCACCACCCGTCCCCTGGCCGCCTCCCACC TCGTCGTCCACAGGGCATCGCTTTCCTGCATTCGGTCGGCCTCATCCACG CGGACATCAAGCCAGAAAACGTCGCTCTCTACCCCCCACCCCAACCCTCC CCTTCCTCGGCGCTAACAGCAGATCGCGCCGACCCGGCTCCGTTCGATCT GCGTCTGATCGACCTCGGCAACGCCGTTTTTGCCGCGGAGGCCGTTCCAG GGGTGACCGCCGGGACGCCGTCGTACCTGTCGCCCGAGGCCAGGGAGGGG CTGCCTTGGGGCCCCGCCGTCGACGTGTGGGCCGTCGGGTGCATCATGTA CGAGATCATCACCGGGGCGCGGGTGGGAGCCGCCGGTGCGGGGGACACTG TACCCGGGGGCAGCAGTACGTACAGCGGCGGCAGCGGTGCCGGGGATGGA GTTCTGGGTGGTGACAGGGAGGTCATCGGGCGTGGTGGCGACTGCGGCGT AGACAACGGCGGTGTTGGTGCTTTTGAGGGTGTTGGAGTTGCCCGTGGGC CAGACGTTCGCGCGGGGTCAGGGGGGGCGTCGACGAGGGGTGTCACGGCG GCGGTGGTGGGGCTGATGGAGCGGTTGCTGACGGAGGATCCAGACAGGAG GCCGAGCGCCGCAGAGGCCCTGAAAGGCGCTATTTTCTTGCGGGCGTAGA GGAGAGGGGTAGCGAATGAGCTACCGCGTTTGTTGCTCCTCCAGCCAGGC CTCAAATGCTCGAACTTGTTTTAGTTTTTTTCTTGGGGGGTTGAGGGGGC GTGAGAGGGCGCGGATATTCGAGAGTCCCTACAATAGATGATGCTTCGTA TTTCACCGCCGTGTGTTATAGACCGGACGGTGTGATCGAGACGCTCTTTC GGGGTGTGTGACGTGATATCATAGAGGTCATGCAGAGGGGAAAGGGCACC GGTCAGCCTGTGCCGCAGCTGCGGCTGTTGTGGCCCTCTGCAGTACACTC GGTGCAATGGACACCGTATTGGCCATGGGATGGGATACGGTGAGATGGGA TGGACTGGGTGTCGCCGGCTGCTACGGTGTGTCCTCTGATGATCTAGGAC GGTATCGCGGGATGCTACGTGGGGTTTCGTCTCACGGGGCCAGTGCTAGG GTTGCTGTTGGGGTACCCAGACCTGGAAGCGGTGATGCAAATGGGTACAT GTAGCGTTCCTAAATCGCGAGCTTACCGGCTGATCACTGACCAGGTTCGG GTGATGCAAATGGGTACATGGGTTTTCGCTGTTATTTTATTTGTGCTTGT TTACTCAGTTTATTTCTTGTTTCAATATGTGAGGCCCGATAGAACGGCAG TATATATATATTGTATACCCTTGCACGACACGTGGGGGTAGTGACCCTCG TGCAAACTGGTTTGTACGTTTGTTTCAAGGTTTGGGGGGGAAGCGTGTGA TTTCCGTGGGAACCAATCGGAATATTTTTGATAGCTGGGTATGGTGTAGG TAGAAAGAAACCACTGGTTTCGAAGTATTGGGTGCGCAGAAACACGCACC CGGTGACAATATGTTGTTTAATGTTAGCGGGCGGCGTGTGCGTCTAATGC TCCCCTGTCAAGTCCTTCCTGTACCAAGATAGATGTTGGGCGCGAAGTGC GACCGCGTCCCAAGCCATGTGGTTCGTGTCCCGAGGAGTCATGTATTTAT TTTGTGCGGGGTGCGCCAAGCAAGTGGGTTTCCAGCAAGCCGTTTGCTGG GTTTGTGCGGGGCGCGTGAAACGTGCCGTCCACAACACCCCCATCGCATT TAGTTAGGCAGCGGTTTCACAATTTCACAAGAGGTCGCTGATAGTGATGA ATGATCTTATCATCGCCGGAAATGGTCATGGGTGTGGATGTTTCAGCAGA TGTGTTTCAGTTTCATTTGGTTTTGATATCATCGCTGCTCACTGCTGCGC AGTGTTTGTTTTGTAACTCCGTACTTTTTGTTCTTCCAGAGCGGAGTGAC GGTCAGACTAGCGGATGCTGCGGGGCAGCCTCTCTCTCTCTCTCTCTCCG CCTTTGCGACGTGTTTCTCTGCCCCCCCCTGGTCGAACGAGTTGTCATTC GTTGCTCTTCGTTGCTTGACAGTCGGTAGAATGTGTAGAAGTAGAGGCAG GCATGAACCATGTTCCGTTTCGCTTTTATTCCGGTGGGTAGCGCATCTTC TTGGTCGTGGAAAGCCGAAGGGACGGGCGCGAATCTCTTACCGCATGTAG CCGCGGGCTCCGGGTGCATTACGTGCTGTACACGTTAGTCAGCCTTTCGT GTAGTGTATTGGTTTGTATTCAGAGGTACCGATCGTCTAGCCTCAGCAGT TTGTGTGTGAGCGAGCATCACGCGGGTATTTTTGTTTTTCGATCGCCCTT TGTTTTCCAAGTATCATGTGTACGTTTTGGTCAAGAGCGGTTGGTTGTGT TGGTGCTGTTGTCTGTGTAGGCAGCGCCCCGACGGCTTATCTCTTCCTGA TCCTCGATCGGTGTGAGCTTGAGTAGAGTAGATTCTTGTAGTGAGTTATT ACGGTAGCTTTCCCTTGGCATCGAGGCCGAAAAAAGGCACATGCCTCGTG CTATGTGTCATCAGGTGCACCTTCGGTGGCCGCCTAGAGTGGAAGGGGGG ATAAACACGATATCGTTCGCGGCGTTGAATTGTGATCGCTCGCAGTCGGT CGTCTTTACCGTGGGTAGGGAAAATGGAAGGAAAATGAAAGGAGGCGTGT TGGTTGTGAACGGGAATCACTTCGTATATATAGCAGGTATGATTAGATGT GTGTGTACGTGTGCGTGTGGACCGGCGAATAGAATAGATTTGGGTACACA CCACGCAAGGGAGGAAAGAACGAATACAGAGAACATTCTCGCGACGCAGC TTCTCCTTGAGCAGTCTTGCTCATCGTGATGTATGCCGTAGAATTTGAAT AAAAAAAATGCGAAAAGAGCAAGCAAAATGGAACACTTGGTCGTCGTCAT GTGCTTTTTCGCTACACGAGGGGCTTGCACACCTGCTGCTGCCGTGCCCG TCAGGAGTAGCTTTGCTTTCGATCGAGTTGTTCGGATAGAAATGTGAGTG GGCGCGGCACTCTCCTCGATATTTCATATTTTGCCAACCCGGCAGAGCGG CGGCAGAAAGGACGAGATTGCGAGAGAGAGATAGAGAGCAAGAAAAAGGG ATATGAGTACAGTACAAGGAGAGTTGTGTTGCAAGGAACAAACGTTGTAC CAGGTAGTTTTGTGCTAGGGGCAAGTGTACCTCGCGTGATACGCACCTTA AAGCGAAACACCGTTGGGGAAGCATGATGAGACCAGGGTCCTCTCAGAAT TGTTGATTTCGTTGGTACTGCAGGATGTGCACATCCCATGCCACGTGTTT ATTGGCGGGTTTCGAGAACCGTCTCTCAAAGGGGGCTCGCTTTGCTGCTT CTAAAGCCCGCAGGTCAACATGTTTACAAGAGATGCCAATCGTAAGACGG TTCTTCTCGGAAAGGATGGGTACACATTTATCCCTCTACCGGCACTGAAC TCCATGACTGCATTTCCACTCGAG
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Coding sequence (CDS) from alignment at P-littoralis_Contig198:348664..354137-

>mRNA_P-littoralis_Contig198.69.1 ID=mRNA_P-littoralis_Contig198.69.1|Name=mRNA_P-littoralis_Contig198.69.1|organism=Pylaiella littoralis U1_48|type=CDS|length=1563bp|location=Sequence derived from alignment at P-littoralis_Contig198:348664..354137- (Pylaiella littoralis U1_48)
ATGGATGCAATGGAAACGGACGACGTCGGAAACACCTCGGGTACCCCCTC
TACCATGCCTGTTGTGGCTGTGACTTCCAAGCGAAAGAGCTTCAGGATGA
GCGAGTCTTCCCCGCCGACACCCTCGCTGACACAAGAAGTACAGGGTGGA
GTGTTCACCTGCGCCACCGCCACCGCCGCTACCCAGTGCATCCCCGCTTC
GATTGGAGGAGATAAAGAGGCTTACATCCGAGCCAGCTCTCGAAACCCCC
AGCAGCAACAACAGATACAACAGCAACAGCAACAGCAACAGCAACAGCAA
CAGCAACAAGAGCAACACCAGCATCAGAGGAAGAGAGATATTTCGATCCA
AGTCTCCTGTCTCGAGGGAGAGGTCATGCGCATCCCTCTGTCGGGGAAGA
CGGTTCCCTTTCGGGTCGTCAAGAGACGCGGTCGAGGCTTCTCCAGCGTG
GTGTTTGAGTGTGAGCGCGAGGAAAAGGATTCGGGGGGAACTGTGATGGA
GCAGGATGAGGGCCAAGGAGGAGGAGCGGGTGTTCTGCAGGTCGTTACTG
TCAAGGTCATGTCCGGGGGAAAGTCCGGCATGGGTGCATGCCTCCACGAG
GTAGAAACCCTCGCTTTTCTCAAGGTCAAGCGAGAAGAGGCGGGCTTGAC
GCAAGATCGGTCGCGCTTCGCCGAGCTAGCCTCGTGGTTCTATAAGCGGT
CCGCAGCGGGTGGAGTGGACCACGTCTGTCTGGTTTTCCGCGGGGGAGGC
GTGTCTCTCCGTGAAGCGATGTCTGCAAGATCGCCGCCGCCCTTCGGCAG
CCCGGGGGGCGTGAAGCACGGCGGCACCGGTGGGTCATCGTCGCCGTCGC
CGTCGACGGCGTCGTCTCCTCCTTCGCTGGCATGGGGCGCTCAGGAGGTG
GTGGAGGTTGCGCGTGGTCTACTAGAGGGCATCGCTTTCCTGCATTCGGT
CGGCCTCATCCACGCGGACATCAAGCCAGAAAACGTCGCTCTCTACCCCC
CACCCCAACCCTCCCCTTCCTCGGCGCTAACAGCAGATCGCGCCGACCCG
GCTCCGTTCGATCTGCGTCTGATCGACCTCGGCAACGCCGTTTTTGCCGC
GGAGGCCGTTCCAGGGGTGACCGCCGGGACGCCGTCGTACCTGTCGCCCG
AGGCCAGGGAGGGGCTGCCTTGGGGCCCCGCCGTCGACGTGTGGGCCGTC
GGGTGCATCATGTACGAGATCATCACCGGGGCGCGGGTGGGAGCCGCCGG
TGCGGGGGACACTGTACCCGGGGGCAGCAGTACGTACAGCGGCGGCAGCG
GTGCCGGGGATGGAGTTCTGGGTGGTGACAGGGAGGTCATCGGGCGTGGT
GGCGACTGCGGCGTAGACAACGGCGGTGTTGGTGCTTTTGAGGGTGTTGG
AGTTGCCCGTGGGCCAGACGTTCGCGCGGGGTCAGGGGGGGCGTCGACGA
GGGGTGTCACGGCGGCGGTGGTGGGGCTGATGGAGCGGTTGCTGACGGAG
GATCCAGACAGGAGGCCGAGCGCCGCAGAGGCCCTGAAAGGCGCTATTTT
CTTGCGGGCGTAG
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