mRNA_P-littoralis_Contig198.3.1 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig198.3.1 vs. uniprot
Match: A0A6H5LNH0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LNH0_9PHAE) HSP 1 Score: 543 bits (1399), Expect = 1.920e-179 Identity = 412/893 (46.14%), Postives = 472/893 (52.86%), Query Frame = 1
Query: 1 MYASKAVIEGTNLDAKIRQAVNHFEFNDALVSKKGLWQSLRAYCTSGGLPVTSVVPQTFYLSGGARKLFTPSAGSGAPSDSSAEGLHGRSDEY-RGSGLSRD--DDRAEFLAFCAAMDALSGAS----------------------SSTAAT----------TVPPDTAVEPPAKLKDNAPSAAARSPMLLASKPAAVGMAAEAQPQAEEATVARSSPSSSGSPATSPGEAMRAAGVLTADGDSSLQHYVELCPPPKPVSRSVSPNSPFLSPPSPALARTLPPRGPTSLD--------------TSLPPDGGVGRGEDVVPAQNGSALLDIDASS-------GVTVPDPDI-------FDTVETNLCGEVKE--RHVSLKMEEVEVAGDVSGASAGETPKKSSRNNAGIHPARAGKVGAYIDETRCTVAAVAKSSRPSGVIRPEEVAKVGSTAGGVEPGGAAGNMPTWVVKPAANSNCGFGIQVCCSLK---------------------------------EVLNVVDATDDRAGRSGWVVQSYIARPLLIRGRKFDIRLFVLLVADPSTRSWRRRSKSFLKQSGKSSGRSDRLAEHDGGQ----TGKAGDVEHEADLPTTGENRGRAGTKAGVEVAPASGR---GGNGGALPPPPCPLSAWCHKHAYVRMSSVRYSNDPSKVKDKFVHLTNNAVQRRSPSYGQDEPGNKLTLSDLQDWLDGDGSRYKGTACGWVEQTLRPRMHALVATSVAAAASAGINKRGRPYAFELLGYDFMVDDDLRVWLIE-----------------------------------VNSNPCLEFVCPLLQNMIMQVIDDTLSIALDSVFRPPEKHRTAAAGAGGVSRGGDSEGSKVGFSRVYPVV 2259
MYAS+ VIEGTNLD +RQAVNHFEFND LVSKKGLWQSLR YC S G VT +VPQTFYLSGGA + S AP D GR + SG+ D DDRAEFLA CAA SGAS TA T TVPPDTAVE AS P +G A + P + VA T GE + V T++ D S E CPP V RS SP P LSP A+T P+ SL+ + LP D + V P N S L A S G P P + D VE N V R+ E AG +G S +TPK S+R GI + ID T V SS +G+ + V+P +AG+MPTWVVKPAANSNCGFGIQVCCS + +VL +VDATD++AGRSGWVVQ YI RPLL+RGRKFDIRLFVL+VADPSTR+WRRRSK F +Q S A G +GK G VE + + + APA+G G PCPL AWCH+ AYVR SSVRY+N PSKVKD+FVHLTNNAVQR+SPSYGQDEPGNKLTL+DLQDWLDGDGS +KG A GWVEQTLRPRMH++VATSVAAA+ AGIN+RGRPYAFELLGYDFMVDDDLRV+LIE VNSNPCLEFVCPLLQ MI++VIDDTLSIALDSVFRPPEKHRTAAA GG++E + G+S VYP V
Sbjct: 1 MYASRPVIEGTNLDVNLRQAVNHFEFNDTLVSKKGLWQSLRGYCASEGQSVTGIVPQTFYLSGGAVRS------SKAPGDPP-----GRDPDLGSASGVQDDVGDDRAEFLAACAATGDPSGASXXXXXXXXXXXXXSLAQTSPSQQRTAETSSVMQAMPISTVPPDTAVEDVVLTGGG-----------CASPP--IGRVARSVPGCKTNMVA-----------TVAGEKVPKVAV-TSETDFSGHDPAESCPP-HTVVRSASPAPPPLSPRP--FAQT--PKDKVSLEKRPEDEECPENVSSSPLPSDDVTAQDNCVDPVSNCSESLGAAAESSTVRSGNGRNSPIPRVGTATATKMDEVEGNEGRSVNSLARNGGGGRGXGERAGSTNG-SEDQTPKGSTRG--GIPIVKDTHDTDSIDLT------VGDSSTGNGIKSDGAGKNRHRGSSDVDPETSAGSMPTWVVKPAANSNCGFGIQVCCSRELLPSNISESVTAASSANRCPLGLPRPPDFLASQDVLGIVDATDNKAGRSGWVVQRYIERPLLVRGRKFDIRLFVLVVADPSTRAWRRRSKPFRQQQTPRGHASKGTARTSSGTKSPLSGKVGSVEKQGE----------------PKAAPANGSSVFGXXXXXXXXXPCPLRAWCHQDAYVRTSSVRYTNHPSKVKDRFVHLTNNAVQRQSPSYGQDEPGNKLTLADLQDWLDGDGSTHKGKAFGWVEQTLRPRMHSMVATSVAAASQAGINRRGRPYAFELLGYDFMVDDDLRVYLIEKEAGVNIIREPRVWSLAYLPIVGALQTLIRPISTQVNSNPCLEFVCPLLQGMIVRVIDDTLSIALDSVFRPPEKHRTAAA----AGLGGNAEAAGAGYSLVYPAV 823
BLAST of mRNA_P-littoralis_Contig198.3.1 vs. uniprot
Match: D8LIE2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LIE2_ECTSI) HSP 1 Score: 498 bits (1282), Expect = 5.490e-165 Identity = 356/767 (46.41%), Postives = 420/767 (54.76%), Query Frame = 1
Query: 1 MYASKAVIEGTNLDAKIRQAVNHFEFNDALVSKKGLWQSLRAYCTSGGLPVTSVVPQTFYLSGGARKLFTPSAGSGAPSDSSAEGLHGRSDEYRGSGLSRD----DDRAEFLAFCAAMDALSGASSSTAATTVPPDTAVEPPAKLKDNAPSAAARSPMLLASKPAAVGMAAEAQPQAEEATVARSSPSSSGSPATSPGEAMRAAGVLTADGDSSLQHYVEL---CPPPKPVSRSVSPNSPFLSPPSPALARTLPPRGPTSLDTSLPPDGGVGRGEDVVPAQNGSALLDIDASSGVTVPDPDIFDTVETNLCGEVKERHVSLKMEEVEVAGDVSGASAGETPKKSSRNNAGIHPARAGKVGAYIDETRCTVAAVAKSSRPSGVIRPEEVAKVGSTAGGVEPGGAAGNMPTWVVKPAANSNCGFGIQVCCSLKEVLNVVDATDDRAGRSGWVVQSYIARPLLIRGRKFDIRLFVLLVADPSTRSWRRRSKSFLKQS---GKSSGRSDRLAEHDGGQTG-KAGDVEHEADLPTTGENRGRAGTKAGVEVAPASGR---GGNGGALPPPPCPLSAWCHKHAYVRMSSVRYSNDPSKVKDKFVHLTNNAVQRRSPSYGQDEPGNKLTLSDLQDWLDGDGSRYKGTACGWVEQTLRPRMHALVATSVAAAASAGINKRGRPYAFELLGYDFMVDDDLRVWLIEVNSNPCLEFVCPLLQNMIMQVIDDTLSIALDSVFRPPEKHRTAAAGAGGVSRGGDSEGSKVGFSRVYPVV 2259
MYAS+ VIEGTNLD +RQAVNHFEFND LVSKKGLWQSLRAYC S G VT +VPQTFYLSGGA + S AP + HGR D GS + DDRA FLA CAAM S ASS TT+P A EPP +A++SPS + TS M A +LT D++++ V C VSR + A+ R++ + T++ V P G P++ T ET D SG A E+ + + P G + + V+ RP PE+V A+ +P V N +VL +VDATD++AGRSGWVVQ YI RPLL+RGRKFDIRLFVL+VADPSTRSWRRRSK F +Q G +S + R++ Q KAG VE + + APA+G G PCPL AWCH+ AYVR SSVRYSN PSKVKD+F+HLTNNAVQRRSPSYG DEPGNKLTL+DLQDWLDGD S +KG ACGWVEQTLRPRMH++VATSVAAA+ AGIN+RGRPYAFELLGYDFMVDDDLRV+LIEVNSNPCLEFVCPLLQ MI++VIDDTLSIALDSVFRPPEKHRTAAA GG++E + G+S VYPVV
Sbjct: 1 MYASRPVIEGTNLDVNLRQAVNHFEFNDTLVSKKGLWQSLRAYCASEGQSVTGIVPQTFYLSGGAVRS------SKAPGNP-----HGR-DLNLGSASGKQGNVGDDRAAFLAACAAMGDPSEASS----TTIP---AQEPPLP------------------------------------PLAQTSPSQQRTAETS--SVMPAKPILTLAPDTAVEDVVLTGGGC-----VSRPLG-----------AVVRSV-----SGCKTNM-----------VAPVAGGKV--------------PEVAVTSET----------------------DFSGHDAAESCPPQTVVRSASPPPAPRSPGPF---AQTPTDKVSLEERPEDEECPEDV--------------ASSPLPPDDVTAQENDIA----------PDVLGIVDATDNKAGRSGWVVQRYIERPLLVRGRKFDIRLFVLVVADPSTRSWRRRSKPFQQQQTPRGHASKGTARVSSDSESQLSEKAGSVEERGE----------------PKAAPANGSSVFGXXXXXXXXXPCPLRAWCHQDAYVRTSSVRYSNHPSKVKDRFIHLTNNAVQRRSPSYGHDEPGNKLTLADLQDWLDGDESIHKGNACGWVEQTLRPRMHSMVATSVAAASQAGINRRGRPYAFELLGYDFMVDDDLRVYLIEVNSNPCLEFVCPLLQGMIVRVIDDTLSIALDSVFRPPEKHRTAAA----AGLGGNAEAAGAGYSLVYPVV 595
BLAST of mRNA_P-littoralis_Contig198.3.1 vs. uniprot
Match: A0A7S3US62_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3US62_HETAK) HSP 1 Score: 176 bits (445), Expect = 6.880e-45 Identity = 119/332 (35.84%), Postives = 165/332 (49.70%), Query Frame = 1
Query: 1186 AAGNMPTWVVKPAANSNCGFGIQVCCSLKEVLNVVDA---TDDRAGRSGWVVQSYIARPLLIRGRKFDIRLFVLLVADPSTRSWRRRSKSFLKQSGKSSGRSDRLAEHDGGQTGKAGDVEHEADLPTTGENRGRAGTKAGVEVAPASGRGGNGGALPPPPCPLSAWCHKHAYVRMSSVRYSNDPSKVKDKFVHLTNNAVQRRSPSYGQDEPGNKLTLSDLQDWLDGDGSRYKGTACGWVEQTLRPRMHALVATSVAAAASAGINKRGRPYAFELLGYDFMVDDDLRVWLIEVNSNPCLEFVCPLLQNMIMQVIDDTLSIALDSVFRPPEKHR 2172
A G W+VKPA+ SN G GI+V +EVL +VD + DR R GW+VQ Y+ PLL+RGRKFD+R +VLLVA P + R G L+A + YVR SS R+ ++ DKF+HLTN+AVQ + YG+ E GNK++ + Q ++D Y G A +VE+ + P + L SV A A INK R FELLGYDFM+DD+ ++ LIEVNSNPCLEF P+L++ I ++ + + IA+DS+F PP+K++
Sbjct: 98 ALGRDCFWIVKPASMSNRGMGIEVKPGGEEVLALVDRPLKSGDRR-RFGWIVQRYMMNPLLVRGRKFDVRCWVLLVARPXXXXXXXXXXXXXXR------------------------------------------------------RPG-----------LAAHLFREGYVRTSSARFDARRDRLGDKFIHLTNDAVQNKGKDYGKYEAGNKMSFEEFQAYID---ETYDGKA-NYVEEHMLPGIKELARLSVEAVALE-INKSRRKCCFELLGYDFMIDDNFQISLIEVNSNPCLEFSSPMLEDYITNLLSNVIEIAVDSIFLPPKKYQ 358
BLAST of mRNA_P-littoralis_Contig198.3.1 vs. uniprot
Match: A0A7S3ZJX7_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S3ZJX7_9STRA) HSP 1 Score: 176 bits (446), Expect = 3.860e-44 Identity = 117/323 (36.22%), Postives = 156/323 (48.30%), Query Frame = 1
Query: 1207 WVVKPAANSNCGFGIQVCCSLKEVLNVVDATDDRAGR-SGWVVQSYIARPLLIRGRKFDIRLFVLLVADPSTRSWRRRSKSFLKQSGKSSGRSDRLAEHDGGQTGKAGDVEHEADLPTTGENRGRAGTKAGVEVAPASGRGGNGGALPPPPCPLSAWCHKH-AYVRMSSVRYSNDPSKVKDKFVHLTNNAVQRRSPSYGQDEPGNKLTLSDLQDWLDGDGSRYKGTACGWVEQTLRPRMHALVATSVAAAASAGINKRGRPYAFELLGYDFMVDDDLRVWLIEVNSNPCLE-FVCPLLQNMIMQVIDDTLSIALDSVFRPPEK 2166
W++KPA+ SN GFGI+V L E+ +V + R GWV Q YI RPLLI GRKFDIR F LLV D +GR + A+ H+ +YVR SS +YS P + K VHL N+ VQ + SYG+ E GNKL L+D +D + W+E+TL PRM A++ ++ AA A +N + R FELLG+DFM+D DLRV LIE+NSNPCLE + CPLL+ +I +++DD L + LD + PP K
Sbjct: 180 WILKPASMSNRGFGIRVANDLAEIEAIVSTEARKDARCGGWVCQKYIERPLLIDGRKFDIRAFCLLVTD----------------------------------------------------RKGR----------------------------IQAYAHRSCSYVRTSSTKYSLKPQDLAKKGVHLVNDGVQNKEESYGKFEAGNKLALADFAQRVDAPAN--------WLEETLIPRMEAIMRYTIDAA-HARLNPKKRQACFELLGFDFMLDADLRVDLIEINSNPCLETWSCPLLEGLIPKLVDDVLRVGLDQILPPPSK 413
BLAST of mRNA_P-littoralis_Contig198.3.1 vs. uniprot
Match: A0A7S1GB26_9STRA (Hypothetical protein (Fragment) n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1GB26_9STRA) HSP 1 Score: 154 bits (388), Expect = 1.490e-37 Identity = 111/329 (33.74%), Postives = 155/329 (47.11%), Query Frame = 1
Query: 1207 WVVKPAANSNCGFGIQVCCSLKEVLNVVDATDDRAGRSGWVVQSYIARPLLIRGRKFDIRLFVLLVADPSTRSWRRRSKSFLKQSGKSSGRSDRLAEHDGGQTGKAGDVEHEADLPTTGENRGRAGTKAGVEVAPASGRGGNGGALPPPPCPLSAWCHKHAYVRMSSVRYSNDPSKVKDKFVHLTNNAVQRRSPSYGQDEPGNKLTLSDLQDWLD----GDGSRYKGTACGWVEQTLRPRMHALVATSVAAAASAGINKRGRPYAFELLGYDFMVDDDLRVWLIEVNSNPCLEFVCPLLQNMIMQVIDDTLSIALDSVFRPPEKHRTAA 2181
W++KPA +N G GI V +++ V ++V + A + W+VQ Y+ PLL+RGRKFDIR FVL+ A TK G E+ RG ++H YVR SS +++ S + D+ +HLTN+AVQ +S YG+ E GNKLT LD GDG+R+ G PR+ LV S+AA AS +N++ P FELLGYDFMVD + + WLIEVNSNPCLE P L M+ ++I+ L + +D F P + + A+
Sbjct: 108 WIIKPAVMTNRGTGISVVDTVEAVSDIVRKGE--AKKRQWIVQRYMETPLLVRGRKFDIRCFVLVAA-----------------------------------------------------------TKGGREI-----RG---------------HLYEHGYVRTSSRKFTL--SHLGDRMIHLTNDAVQNKSADYGKYEAGNKLTYEQFAGHLDEAHAGDGARFMGEVL--------PRIKELVTLSLAATASK-LNRKRTPGCFELLGYDFMVDANFKTWLIEVNSNPCLELSSPYLAGMLPRLIEHVLQLTVDVEF--PRREQPAS 342
BLAST of mRNA_P-littoralis_Contig198.3.1 vs. uniprot
Match: A0A8J8P659_HALGN (Uncharacterized protein n=1 Tax=Halteria grandinella TaxID=5974 RepID=A0A8J8P659_HALGN) HSP 1 Score: 145 bits (366), Expect = 5.250e-32 Identity = 92/318 (28.93%), Postives = 143/318 (44.97%), Query Frame = 1
Query: 1207 WVVKPAANSNCGFGIQVCCSLKEVLNVVDATDDRAGRSGWVVQSYIARPLLIRGRKFDIRLFVLLVADPSTRSWRRRSKSFLKQSGKSSGRSDRLAEHDGGQTGKAGDVEHEADLPTTGENRGRAGTKAGVEVAPASGRGGNGGALPPPPCPLSAWCHKHAYVRMSSVRYSNDPSKVKDKFVHLTNNAVQRRSPSYGQDEPGNKLTLSDLQDWLDGDGSRYKGTACGWVEQTLRPRMHALVATSVAAAASAGINKRGRPYAFELLGYDFMVDDDLRVWLIEVNSNPCLEFVCPLLQNMIMQVIDDTLSIALDSVFRPP 2160
W+VKP N+N G GIQVC L ++ +++ T+ + +++Q YI +PLL +GRKFDIR + L+ T N L + + Y+R SS ++ V ++ +HLTN+AVQ++S YG+ E GNKL+ + Q +LD + + + L P++ + AT A S ++ R FE+ GYDFM+D+DL+ WLIEVN+NPCLE P L +I +I++ + IA+D +F PP
Sbjct: 1382 WIVKPGENTNRGCGIQVCRELAQIKDIIQNTNVNGQKRSYIIQKYIEKPLLYKGRKFDIRCYTLMT--------------------------------------------------TVNGN-------------------------------LQGYWYNEGYLRTSSKDFNL--KNVTNRLIHLTNDAVQKKSDDYGKFESGNKLSYPEFQKYLDSTDVKCN------ITKDLVPQLKKM-ATDTIKACSRKVDPHRRHNTFEIYGYDFMIDEDLKPWLIEVNTNPCLELSAPYLSRLIPNMIENAVKIAIDPLFPPP 1609
BLAST of mRNA_P-littoralis_Contig198.3.1 vs. uniprot
Match: A0A1Q9E8S7_SYMMI (Tubulin--tyrosine ligase n=1 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A1Q9E8S7_SYMMI) HSP 1 Score: 137 bits (344), Expect = 4.270e-31 Identity = 94/315 (29.84%), Postives = 144/315 (45.71%), Query Frame = 1
Query: 1207 WVVKPAANSNCGFGIQVCCSLKEVLNVVDATDDRAGRSGWVVQSYIARPLLIRGRKFDIRLFVLLVADPSTRSWRRRSKSFLKQSGKSSGRSDRLAEHDGGQTGKAGDVEHEADLPTTGENRGRAGTKAGVEVAPASGRGGNGGALPPPPCPLSAWCHKHAYVRMSSVRYSNDPSKVKDKFVHLTNNAVQRRSPSYGQDEPGNKLTLSDLQDWLDGDGSRYKGTACGWVEQTLRPRMHALVATSVAAAASAGINKRGRPYAFELLGYDFMVDDDLRVWLIEVNSNPCLEFVCPLLQNMIMQVIDDTLSIALDSVF 2151
W+VKPA +N G GI++ +++EV VDA + W +Q YI +PLL+ GRKFDIR + LL+ DP+ S++ A+ ++ AY+R +S +Y+ +K D+ VHL N+AVQ+ +YG+ E NK++L + Q +LD R V + L P++ L+A +V A A +N R FE+ G+DFMVD D RVWLIE N+NPCL+ L ++I ++D L + +D +F
Sbjct: 92 WIVKPAEWANRGCGIRIFKTIEEVRARVDAKE-----RAWAIQKYIEKPLLVHGRKFDIRAYCLLLQDPTNWSFK-------------------------------------------------------------------------------AFYYRDAYLRTTSAQYT---TKNLDRMVHLNNDAVQKHGDNYGKFESANKMSLDEFQKYLDEHHVRTIN-----VREDLMPQIQGLMADAVQATV-AMMNPRQIANCFEVFGFDFMVDADFRVWLIECNANPCLDLCSAYLSHLIPTMLDSALQLTVDQMF 313
BLAST of mRNA_P-littoralis_Contig198.3.1 vs. uniprot
Match: A0BCS9_PARTE (Uncharacterized protein n=1 Tax=Paramecium tetraurelia TaxID=5888 RepID=A0BCS9_PARTE) HSP 1 Score: 137 bits (346), Expect = 2.260e-30 Identity = 97/322 (30.12%), Postives = 145/322 (45.03%), Query Frame = 1
Query: 1207 WVVKPAANSNCGFGIQVCCSLKEVLNVVDATDDRAGR---SGWVVQSYIARPLLIRGRKFDIRLFVLLVADPSTRSWRRRSKSFLKQSGKSSGRSDRLAEHDGGQTGKAGDVEHEADLPTTGENRGRAGTKAGVEVAPASGRGGNGGALPPPPCPLSAWCHKHAYVRMSSVRYSNDPSKVKDKFVHLTNNAVQRRSPSYGQDEPGNKLTLSDLQDWLDGDGSRYKGTACGW--VEQTLRPRMHALVATSVAAAASAGINKRGRPYAFELLGYDFMVDDDLRVWLIEVNSNPCLEFVCPLLQNMIMQVIDDTLSIALDSVFRP 2157
W++KPA + N G G+ V +L+EV ++ + G +V+Q YI RPLL+ GRKFDIR +VL+ + + + K AY+R S +S D KD+++HLTNNAVQ+ + +YGQ E GN+L+L+ Q LD + Y GW ++ ++ M+ S +NKR R Y +LLGYDFM+D++L++WLIEVN+NPCLE LL+ +I +++DD + LD VF P
Sbjct: 339 WLLKPA-DWNRGEGVHVFNTLEEVETLIKSYYYGKGNYECKEFVIQKYIERPLLLSGRKFDIRCWVLVSQE------------------------------------------------------------------------------------MQYFLFKEAYIRTSGTAFSLDN---KDRYIHLTNNAVQKNAQNYGQFEDGNQLSLNRFQQLLDQQETTYNFRKQGWPMIKDVVKITMN-----------STRMNKRNRKYGMQLLGYDFMIDENLKLWLIEVNANPCLEESSNLLKMLIPRMLDDAFKLTLDQVFTP 561
BLAST of mRNA_P-littoralis_Contig198.3.1 vs. uniprot
Match: A0A0G4G063_VITBC (Uncharacterized protein n=2 Tax=Vitrella brassicaformis TaxID=1169539 RepID=A0A0G4G063_VITBC) HSP 1 Score: 139 bits (349), Expect = 4.780e-30 Identity = 98/321 (30.53%), Postives = 153/321 (47.66%), Query Frame = 1
Query: 1207 WVVKPAANSNCGFGIQVCCSLKEVLNVVDATDDRAGRSGWVVQSYIARPLLIRGRKFDIRLFVLLVADPSTRSWRRRSKSFLKQSGKSSGRSDRLAEHDGGQTGKAGDVEHEADLPTTGENRGRAGTKAGVEVAPASGRGGNGGALPPPPCPLSAWCHKHAYVRMSSVRYSNDPSKVKDKFVHLTNNAVQRRSPSYGQDEPGNKLTLSDLQDWLDGDGSRYKGTACGWVEQTLRPRMHALVATSVAAAASAGINKRGRPYAFELLGYDFMVDDDLRVWLIEVNSNPCLEFVCPLLQNMIMQVIDDTLSIALDSVFRPPEKH 2169
W+VKP SN G GI++ L++V +V D ++ ++Q YI RP L+ GRKFDIR++ L+V EH ++ EV + A+ ++ Y+R SS Y D D+ +HLTN+AVQ++S SYG+ E NKL+ ++ Q +L D R K +++ L +M ++A + AAA A +N R ++FE+ GYDFMVD+ +VWL+E+N+NPCLE L ++I +I+ T+ +A+D +F PP H
Sbjct: 382 WIVKPGEYSNRGNGIKITNRLEDVEMMVGGRDGKST----IIQKYIERPFLVHGRKFDIRVYGLMVE------------------------------------------EH----------------RSAQEVI------------------VRAYMYRDGYLRTSSETYRPD---CFDRMIHLTNDAVQKKSESYGRFEAANKLSYAEFQKYL--DTCRPKDQVV--IQEHLVTQMQQIMADTFRAAA-ANMNTNRRQHSFEIFGYDFMVDESNKVWLLEINTNPCLELSSAWLAHIIPLMIEHTIRVAVDPLFPPPPSH 614
BLAST of mRNA_P-littoralis_Contig198.3.1 vs. uniprot
Match: A0A2R5H210_9STRA (Tubulin glycylase 3D n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5H210_9STRA) HSP 1 Score: 133 bits (335), Expect = 6.360e-30 Identity = 120/368 (32.61%), Postives = 158/368 (42.93%), Query Frame = 1
Query: 1195 NMPTWVVKPAANSNCGFGIQVCCSLKEVLNVV-DATDDRAGRSGWVVQSYIARPLLIRGRKFDIRLFVLLVADPSTRSWRRRSKSFLKQSGKSSGRSDRLAEHDGGQTGKAGDVEHEADLPTTGENRGRAGTKAGVEVAPASGRGGNGGALPPPPCPLSAWCHKHAYVRMSSVRYSNDPSKVKDKFVHLTNNAVQRRSPSYGQDEPGNKLTLSDLQDWLD---GDGSRYKGTACGWVEQTLRPRMHALVATSVAAAASAGINKRGRPYAFELLGYDFMVDDD------------LRVWLIEVNSNPCLEFVCPLLQNMIMQVIDDTLSIALDS-VFRPPEKHRTAAAGAG------GVSRGGDSEGSK 2229
N ++VKP + +N G GI + S V + + D R WVVQ YI RPLL+ GRKFDIR F LLV E+ + +P G A G E + H AYVR SS YS ++D+FVHLTN+AVQ ++ YG+ E NKL+ L + L+ G G+ + W + +R H +V A ++RGR FEL G DFM+ D+ RV LIEVN NPCLE VCPLL +I +VIDDT +I LDS VF P + +G G+ D+E SK
Sbjct: 112 NDKLYIVKPGSGTNRGVGIFMARSRAGVARALTEQIDCGTNRKSWVVQDYIERPLLVHGRKFDIRCFALLVFS-----------------------------------------ENSSVMPL-GTQDSTASPAEGCEQG------------------FRLYLHDQAYVRTSSRPYST--KNLEDRFVHLTNDAVQSKAREYGRAEAANKLSFDQLAEALEASEGPGAGAQVRESFWPQ--IRTICHETFRNAVTAIQP---SRRGR--RFELFGLDFMITDEGHPQEAGAEDKVRRVQLIEVNENPCLERVCPLLAAIIPKVIDDTFAIVLDSGVFFPASQDANTHRKSGFEELPLGIPIASDAEDSK 410 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig198.3.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig198.3.1 >prot_P-littoralis_Contig198.3.1 ID=prot_P-littoralis_Contig198.3.1|Name=mRNA_P-littoralis_Contig198.3.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=755bp MYASKAVIEGTNLDAKIRQAVNHFEFNDALVSKKGLWQSLRAYCTSGGLPback to top mRNA from alignment at P-littoralis_Contig198:19704..24688- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig198.3.1 ID=mRNA_P-littoralis_Contig198.3.1|Name=mRNA_P-littoralis_Contig198.3.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=4985bp|location=Sequence derived from alignment at P-littoralis_Contig198:19704..24688- (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig198:19704..24688- >mRNA_P-littoralis_Contig198.3.1 ID=mRNA_P-littoralis_Contig198.3.1|Name=mRNA_P-littoralis_Contig198.3.1|organism=Pylaiella littoralis U1_48|type=CDS|length=2265bp|location=Sequence derived from alignment at P-littoralis_Contig198:19704..24688- (Pylaiella littoralis U1_48)back to top |