mRNA_P-littoralis_Contig197.80.1 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig197.80.1 vs. uniprot
Match: A0A6H5JH92_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JH92_9PHAE) HSP 1 Score: 312 bits (800), Expect = 1.780e-102 Identity = 165/277 (59.57%), Postives = 189/277 (68.23%), Query Frame = 3
Query: 9 MADEIGALACTASVILNISPVRDVFGPNNNPQPYSTAHRPLRYSAGAGCRVLLLPLFGCTSAINKTGSVTERSILPYCMMMVDGANWVVFAWLVDDVFPIGVTNGFGCLAGIAYSAVYLRHCRDDKREGVRRRAWIIFFTALAIVGLMTTTGLTIALVWSKDTAEDSVGYFVDFFNVGLYASPLSLAWQVLRTGSTSGMYLPLSITITAAAALWATYGFLVSDWFVAAPQSAGLLAGLAQLSLFARYGVADNNQSPQVRGAGDVGRRSGNGYPSPPD 839
MA +G LA AS++LN+SP RDV+ INKT SVTERSILPYCMMMVDGANWVV+A L+DDVFPIG TN FG +AG YSAVYLR+C DKRE VRR AW IF A++I+GLM T+ + +A+VWS TA DS+GYFVD FNV LYASPL LAW+VLRT STSGMYLPLSITI AAAALWATYG+L SDWFVAAPQS G LAGLAQLSLF R+G+ADNNQ + + G+ P P D
Sbjct: 1 MAGIVGTLASIASILLNVSPARDVWD------------------------------------INKTRSVTERSILPYCMMMVDGANWVVYASLIDDVFPIGFTNAFGFVAGSTYSAVYLRNCWHDKRERVRRDAWRIFAGAVSIIGLMATSAVVMAVVWSSTTAADSIGYFVDVFNVCLYASPLELAWKVLRTRSTSGMYLPLSITIAAAAALWATYGYLTSDWFVAAPQSVGFLAGLAQLSLFLRFGIADNNQPSEGQALEPDGQSGNRSSPGPGD 241
BLAST of mRNA_P-littoralis_Contig197.80.1 vs. uniprot
Match: D8LS37_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LS37_ECTSI) HSP 1 Score: 169 bits (428), Expect = 5.110e-48 Identity = 82/107 (76.64%), Postives = 91/107 (85.05%), Query Frame = 3
Query: 450 MTTTGLTIALVWSKDTAEDSVGYFVDFFNVGLYASPLSLAWQVLRTGSTSGMYLPLSITITAAAALWATYGFLVSDWFVAAPQSAGLLAGLAQLSLFARYGVADNNQ 770
M T+ + + +VWS TA DS+GYFVD FNV LYASPL LAW+VLRT STSGMYLPLSITI AAAALWATYG+L SDWFVAAPQS G LAGLAQLSLF R+G+ADNNQ
Sbjct: 1 MVTSAVVMTVVWSSTTAADSIGYFVDLFNVCLYASPLELAWKVLRTRSTSGMYLPLSITIAAAAALWATYGYLTSDWFVAAPQSVGFLAGLAQLSLFLRFGIADNNQ 107
BLAST of mRNA_P-littoralis_Contig197.80.1 vs. uniprot
Match: H3H2S3_PHYRM (Uncharacterized protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3H2S3_PHYRM) HSP 1 Score: 114 bits (284), Expect = 6.620e-26 Identity = 72/232 (31.03%), Postives = 120/232 (51.72%), Query Frame = 3
Query: 195 INKTGSVTERSILPYCMMMVDGANWVVFAWLVDDVFPIGVTNGFGCLAGIAYSAVYLRHCRDDKR-EGVRRRAWII-FFTALAIVGLMTTTGLTIALVWSKDTAEDSVGYFVDFFNVGLYASPLSLAWQVLRTGSTSGMYLPLSITITAAAALWATYGFLVSDWFVAAPQSAGLLAGLAQLSLF--------------ARYGVADNNQ--SPQVRGAGDVGRRSGNGYPSPP 836
I++ S+ E LP M+ + W+++ +L +FP+G+T GFG LA IA++ VY R +D R + ++ AW A+ + ++ TG+T S + A S+G+F F+VG++ASPL +V+ T S + + + +S+ I ++ LW G L SD+F+A +AG+L G QL L+ +YG +D + SP +G G + Y S P
Sbjct: 30 IHRRKSIGEMPALPLVCMLPNTHLWMLYGYLEGSIFPVGITQGFGQLAAIAFNIVYFRWSPEDTRIKLLKAYAWAFALHCAVTLYFVLVVTGVTSQ---SFEEASTSLGFFGLVFSVGVFASPLGTLKRVVETKSAASIPINMSLMILVSSVLWVATGLLDSDYFIAGLNAAGVLLGAVQLVLYHIYRPSRGEEPFQCQQYGTSDESPVVSPSAKGGGIIAFLESPAYKSLP 258
BLAST of mRNA_P-littoralis_Contig197.80.1 vs. uniprot
Match: A0A6L2LY45_TANCI (Bidirectional sugar transporter SWEET n=1 Tax=Tanacetum cinerariifolium TaxID=118510 RepID=A0A6L2LY45_TANCI) HSP 1 Score: 94.0 bits (232), Expect = 1.440e-18 Identity = 62/201 (30.85%), Postives = 97/201 (48.26%), Query Frame = 3
Query: 159 VLLLPLFGCTSAINKTGSVTERSILPYCMMMVDGANWVVFAWLVDDVFPIGVTNGFGCLAGIAYSAVYLRHCRDDKREGVRRRAWIIFFTALAIVGLMTTTGLTIALVWSKDTAEDSVGYFVDFFNVGLYASPLSLAWQVLRTGSTSGMYLPLSITITAAAALWATYGFLVSDWFVAAPQSAGLLAGLAQLSLFARYGVAD 761
V L P+ K S ++I PY + + A + +A+L + F I N FGC + Y AVYL + + + I+ F I +M + L V + T + VG+ N+ ++A+PLS+ +V+RT S M LS +T A W YGF V+D+++A P AG L G+AQ+ L+ Y +D
Sbjct: 25 VFLAPIPTFYKIYRKKSSEGYQAI-PYMVALFSAALLLYYAFLKTNAFMIITINAFGCFIELTYLAVYLLYAPTSSKISTIK--CILLFNIGGIGAVMVCSLL---FVKDRQTRVEVVGWICAVINLAVFAAPLSIMRKVIRTKSVEYMPFGLSFFLTLCATAWFFYGFFVNDFYIAVPNIAGFLLGIAQMILYCVYKDSD 219
BLAST of mRNA_P-littoralis_Contig197.80.1 vs. uniprot
Match: UPI001CB9706F (bidirectional sugar transporter NEC1-like n=1 Tax=Erigeron canadensis TaxID=72917 RepID=UPI001CB9706F) HSP 1 Score: 93.6 bits (231), Expect = 1.640e-18 Identity = 63/197 (31.98%), Postives = 96/197 (48.73%), Query Frame = 3
Query: 159 VLLLPLFGCTSAINKTGSVTERSILPYCMMMVDGANWVVFAWLVDDVFPIGVTNGFGCLAGIAYSAVYLRHCRDDKREGVRRRAWIIFFTALAIVGLMTTTGLTIALVWSKDTAEDSVGYFVDFFNVGLYASPLSLAWQVLRTGSTSGMYLPLSITITAAAALWATYGFLVSDWFVAAPQSAGLLAGLAQLSLFARY 749
V L PL K S ++I PY + + A + +A+L + + I NGFGC + Y AVYL + + I + + + GL T L++ V ++ E VG+ N+ ++A+PLS+ V+RT S M LS +T A W YGF V+D+F+A P AG L G+AQ+ L+ Y
Sbjct: 19 VFLAPLPTFYKIYRKKSSEGYQAI-PYMVALFSAALLLYYAFLKTNAYMIISINGFGCFIELIYLAVYLFYAPKTSKIST-----IKYISIFNVGGLGTVMILSMLFVKGQERVE-LVGWTCAVINLAVFAAPLSIMRTVIRTKSVEYMPFMLSFFLTLCATAWFFYGFFVNDYFIAVPNIAGFLFGIAQMILYCVY 208
BLAST of mRNA_P-littoralis_Contig197.80.1 vs. uniprot
Match: A0A2Z7CB85_9LAMI (Bidirectional sugar transporter SWEET n=1 Tax=Dorcoceras hygrometricum TaxID=472368 RepID=A0A2Z7CB85_9LAMI) HSP 1 Score: 91.3 bits (225), Expect = 2.310e-17 Identity = 57/196 (29.08%), Postives = 92/196 (46.94%), Query Frame = 3
Query: 201 KTGSVTERSILPYCMMMVDGANWVVFAWLVDDVFPIGVTNGFGCLAGIAYSAVYLRHCRDDKREGVRRRAWIIFFTALAIVGLMTTTGLTIA---LVWSKDTAEDSVGYFVDFFNVGLYASPLSLAWQVLRTGSTSGMYLPLSITITAAAALWATYGFLVSDWFVAAPQSAGLLAGLAQLSLFARYGVADNNQSPQ 779
K S PY + + ++ +A+L D + N GC+ I+Y A+++ + + + R F L ++ +T+ GL I L D VG+ F+V ++A+PLS+ QV+RT S M LS +T A +W YGFL+ D+++AAP GL G+ Q+ L+ Y PQ
Sbjct: 37 KKKSTEGFQSFPYSVALFSATLYLYYAFLKKDALILITINSVGCVFEISYLAIFMIYAKKESRA---------FTCKLLLLFNLTSLGLIIGGTRLFSHGDNRVRIVGWICAAFSVSVFAAPLSIMRQVIRTKSVEFMPFSLSFFLTLCAVMWFCYGFLIKDYYIAAPNVLGLSFGIMQMLLYVVYKDRKQQIQPQ 223
BLAST of mRNA_P-littoralis_Contig197.80.1 vs. uniprot
Match: A0A7J7BUX7_TRIWF (Bidirectional sugar transporter SWEET n=1 Tax=Tripterygium wilfordii TaxID=458696 RepID=A0A7J7BUX7_TRIWF) HSP 1 Score: 90.5 bits (223), Expect = 3.900e-17 Identity = 63/204 (30.88%), Postives = 98/204 (48.04%), Query Frame = 3
Query: 159 VLLLPLFGCTSAINKTGSVTERSILPYCMMMVDGANWVVFAWLVDDVFPIGVTNGFGCLAGIAYSAVYLRHC-RDDKREGVRRRAWIIFFTALAIVGLMTTTGLTIALVWSKDTAEDSVGYFVDFFNVGLYASPLSLAWQVLRTGSTSGMYLPLSITITAAAALWATYGFLVSDWFVAAPQSAGLLAGLAQLSLFARYGVADNN 767
V L P+ K S +SI PY + + + + +L + + I + N GC+ I+Y A+YL + + +KR V+ ++ F +VG LT LV +VG+ FN+ ++A+PLS+ QV+RT S M LS +T A W YGF V D ++A P G L G+AQ+ L+ Y + N
Sbjct: 24 VFLAPMPTFYKIWKKKSSEGYQSI-PYVIALSSAMLLLYYGFLKTNAYIIIIINAIGCVIEISYLALYLLYAPKKEKRNAVKM---VLLFN---VVGFGIMIMLTFVLVKGPQRVT-AVGWICAAFNLAVFAAPLSIMRQVIRTKSVEFMPFTLSFFLTLCATSWFFYGFFVKDMYIAVPNVLGFLFGIAQMILYMIYKDGNKN 219
BLAST of mRNA_P-littoralis_Contig197.80.1 vs. uniprot
Match: A0A662WYV9_9STRA (Uncharacterized protein n=1 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662WYV9_9STRA) HSP 1 Score: 89.7 bits (221), Expect = 5.050e-17 Identity = 55/187 (29.41%), Postives = 97/187 (51.87%), Query Frame = 3
Query: 195 INKTGSVTERSILPYCMMMVDGANWVVFAWLVDDVFPIGVTNGFGCLAGIAYSAVYLRHCRDDKREGVRRRA--WIIFFTALAIVGLMTTTGLTIALVWSKDTAEDSVGYFVDFFNVGLYASPLSLAWQVLRTGSTSGMYLPLSITITAAAALWATYGFLVSDWFVAAPQSAGLLAGLAQLSLFARY 749
I+KT E SILP M+ + WV++A+ V+++FP+ V G L+ + + ++Y R ++ R +R+ +F A + ++ T+G+T S++ E ++G+ N+ LYASPL +V++T + S + + +S+ A LW T+ D FV P + G L Q+ LF Y
Sbjct: 30 IHKTRRTGEVSILPVVMLFANCYVWVLYAYQVNNIFPLFVMTILGMLSSLGFGSIYYRWSKE--RVYIRQLCGGMGLFLAAYTLYYVLGTSGVTNQ---SENGVEKTLGFICVAVNLVLYASPLETMKRVIQTKNASSLPISISVVFLVNAVLWVTFAIADDDLFVLVPNAIGTALCLVQVVLFLIY 211
BLAST of mRNA_P-littoralis_Contig197.80.1 vs. uniprot
Match: H3IC46_STRPU (Sugar transporter SWEET1 n=4 Tax=Echinacea TaxID=7674 RepID=H3IC46_STRPU) HSP 1 Score: 88.6 bits (218), Expect = 5.860e-17 Identity = 58/185 (31.35%), Postives = 87/185 (47.03%), Query Frame = 3
Query: 195 INKTGSVTERSILPYCMMMVDGANWVVFAWLVDDVFPIGVTNGFGCLAGIAYSAVYLRHCRDDKREGVRRRAWIIFFTALAIVGLMTTTGLTIALVWSKDTAEDSVGYFVDFFNVGLYASPLSLAWQVLRTGSTSGMYLPLSITITAAAALWATYGFLVSDWFVAAPQSAGLLAGLAQLSLFARY 749
I G+ SI P+ +++ W + L++D I TNG G + Y+ +Y + D K+ + + +TAL I T G + + TA +G F V +YA+PLS+ Q++RT ST + PLS + W YG LV D F+ P G+L G Q+SLF RY
Sbjct: 29 IRSQGNTQNISIFPFIAGIINTVLWTKYGVLIEDQTVI-FTNGVGIVLQTLYTLIYYLNTNDKKQVHSK-----LLYTALIIY---PTLGAVKFMNMTAATAIHYIGLASSFATVLMYAAPLSVVAQIIRTKSTEALPFPLSFVGLLVSLQWFIYGRLVQDSFIQIPNFLGMLLGAFQMSLFIRY 204
BLAST of mRNA_P-littoralis_Contig197.80.1 vs. uniprot
Match: M5VZU0_PRUPE (Bidirectional sugar transporter SWEET n=7 Tax=Prunus TaxID=3754 RepID=M5VZU0_PRUPE) HSP 1 Score: 88.6 bits (218), Expect = 9.540e-17 Identity = 57/205 (27.80%), Postives = 95/205 (46.34%), Query Frame = 3
Query: 159 VLLLPLFGCTSAINKTGSVTERSILPYCMMMVDGANWVVFAWLVDDVFPIGVTNGFGCLAGIAYSAVYLRHCRDDKREGVRRRAWIIFFTALAIVGLMTTTGLTIALVWSKDTAEDSVGYFVDFFNVGLYASPLSLAWQVLRTGSTSGMYLPLSITITAAAALWATYGFLVSDWFVAAPQSAGLLAGLAQLSLFARYGVADNNQS 773
V L P+ + K S +SI PY + ++ + + L + F I NG GC+ I Y Y+ H K++ + + I+ A +M T + + +VG+ FN+ ++A+PLS+ QV+RT S M LS +T A +W YG D+++A P G L G+AQ+ L+ +Y + N +
Sbjct: 24 VFLAPIPTFYTIYKKKSSKGFQSI-PYVVALLSAMLLLYYGVLKTNAFLIISINGIGCVIEIIYLIFYIVHA--SKKDKITTMSLILLVNVAAFGLVMAVT----LFLLGEAKRVSAVGWMCAVFNIAVFAAPLSIVRQVIRTKSVEYMPFSLSFFLTLCATMWFFYGLFTKDYYIALPNVLGFLLGVAQMILYLKYKNSGKNDA 221 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig197.80.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig197.80.1 >prot_P-littoralis_Contig197.80.1 ID=prot_P-littoralis_Contig197.80.1|Name=mRNA_P-littoralis_Contig197.80.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=345bp MADEIGALACTASVILNISPVRDVFGPNNNPQPYSTAHRPLRYSAGAGCRback to top mRNA from alignment at P-littoralis_Contig197:331715..342521+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig197.80.1 ID=mRNA_P-littoralis_Contig197.80.1|Name=mRNA_P-littoralis_Contig197.80.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=10807bp|location=Sequence derived from alignment at P-littoralis_Contig197:331715..342521+ (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig197:331715..342521+ >mRNA_P-littoralis_Contig197.80.1 ID=mRNA_P-littoralis_Contig197.80.1|Name=mRNA_P-littoralis_Contig197.80.1|organism=Pylaiella littoralis U1_48|type=CDS|length=1035bp|location=Sequence derived from alignment at P-littoralis_Contig197:331715..342521+ (Pylaiella littoralis U1_48)back to top |