mRNA_P-littoralis_Contig197.36.3 (mRNA) Pylaiella littoralis U1_48
|
Overview
Homology
BLAST of mRNA_P-littoralis_Contig197.36.3 vs. uniprot
Match: D8LKY4_ECTSI (Nudix hydrolase domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LKY4_ECTSI) HSP 1 Score: 405 bits (1042), Expect = 2.350e-134 Identity = 223/336 (66.37%), Postives = 245/336 (72.92%), Query Frame = 1
Query: 151 VSPSN-LVERLRCSSTLRQPSLLEREWFDLRAPPGLESAPAGDSAXXXXXXXXXXXXXXXXXRSRRASLSLLLREVEGKVEMLVIKRVVNPRDKWSGHIALPGGRHEAGETELQTAVRECQEEVGISLVSSRFELLGRLGDSRTSTSKDALTVSCFVFVQTDKAETPVTVQPSEVAFAWWVDTAMFYPDPVKREAGFPVTGMVKVARKPHWKASCCALMWLLGAETVFFPCFFLPPPPLLG--QPAGHDSTT-ASICVDYPFDAKTFVMWGMTYGVVSRLAVAGGGDAFARPGPPPFRFNSIGADFLVQSFYMFRRWGSGLSDALSSSLAALRLRQ 1146
++P+N LV+RLR SS LRQP+ E WF L+A G +SAPA DSA R R ASLSL+LREV+GKVEMLVIKR V+ RDKWSGHIALPGGR E GETELQTAVRECQEEVGISL+SSRF LLGRL DS+TSTSKDALTVSCF FVQTDK++ PVT+Q +EVAFAWWVDTA+FYPDP RE GF VT MVK ARKPHWK LMWL GA TVFFPCFFLPPP + G Q DST V YP DAKTFVMWG+T+GVVS L VAGGG FA PP FRF+S+ AD L F RRW L ALSSSLA LRLRQ
Sbjct: 1 MAPANDLVDRLRSSSKLRQPTPTEAAWFSLQARAGKDSAPAVDSAARVSV------------RPRCASLSLILREVDGKVEMLVIKRAVSLRDKWSGHIALPGGRQEPGETELQTAVRECQEEVGISLMSSRFALLGRLKDSKTSTSKDALTVSCFAFVQTDKSDIPVTIQEAEVAFAWWVDTAIFYPDPAPREVGFAVTSMVKAARKPHWKG----LMWLFGANTVFFPCFFLPPPSVSGRKQSLVDDSTIDVPTPVAYPLDAKTFVMWGLTFGVVSDLVVAGGGRGFAHRQPPYFRFHSVRADTLANMFCRIRRWPWNLRRALSSSLATLRLRQ 320
BLAST of mRNA_P-littoralis_Contig197.36.3 vs. uniprot
Match: A0A835YXA0_9STRA (Nudix hydrolase domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YXA0_9STRA) HSP 1 Score: 152 bits (384), Expect = 3.320e-37 Identity = 99/255 (38.82%), Postives = 129/255 (50.59%), Query Frame = 1
Query: 388 EMLVIKRVVNPRDKWSGHIALPGGRHEAGETELQTAVRECQEEVGISLVSSRFELLGRLGDSRTS-TSKDALTVSCFVFVQTDK--AETPVTVQPSEVAFAWWVDTAMFYPDPVKREAGFPVTGMVKVARKPHWKASCCALMWLLGAETVFFPCFFLPPPPLLGQPAGHDSTTASICVDYPFDAKTFVMWGMTYGVVSRLAVAGGGDAFARPGPPPFRFNSIGADFLVQSFYMFRRWGSGLSDALSSSLAALRLR 1143
E+LVI+R N D WSGHIALPGGR GE L AVRE EEVG+ + + LLG+L D R ++ L V+C+VFV TD A PSEVA AWWVD +P P +A FPV+ + AR+ W+A AL +TV+ PCF LPPPP +PA D A A+ MWG T+ +V+ L A GG+ P ++ AD + + RW L+ L RL+
Sbjct: 119 ELLVIRRADNAADAWSGHIALPGGRRARGEDGLACAVREVHEEVGLRVSARTHLLLGKLRDRRAGGDDENPLAVTCYVFVTTDSKTARARPRCAPSEVAHAWWVDVVQLWPVPRVEQAPFPVSAFPRHARRCAWRALRAALR----IDTVWLPCFRLPPPPDAPKPAAADRDAA---------ARALSMWGFTFWLVNDLLSAAGGETCDWLAPHVSTHVAL-ADLALVWLHCAARWLEALAAQLRGQAPRARLK 359
BLAST of mRNA_P-littoralis_Contig197.36.3 vs. uniprot
Match: T0S3V0_SAPDV (Nudix hydrolase domain-containing protein n=1 Tax=Saprolegnia diclina (strain VS20) TaxID=1156394 RepID=T0S3V0_SAPDV) HSP 1 Score: 130 bits (327), Expect = 2.370e-30 Identity = 84/214 (39.25%), Postives = 123/214 (57.48%), Query Frame = 1
Query: 337 SRRASLSLLLREVEGKVEMLVIKRVVNPRDKWSGHIALPGGRHEAGETELQTAVRECQEEVGISLVSSRFELLGRLGDSRTSTSKDALTVSCFVFVQTDKAETPVTVQPSEVAFAWWVDTAMFYPDPVKREAGFPVTGMVKVARKPHWKASCCALMWLLGAETVFFPCFFLPPPPLLGQPAGHDSTTASICVDYPFDAKTFVMWGMTYGVVSRL 978
+R+AS++ +LR ++ +L I+R VNPRD+WSG IA PGG+ EA ET L+TA+RE +EEVG+ L S+ LLG+L R +TS + + VS VF+ T+ A T+Q SEV+ A+WVD + RE P+ M R+ + ++ LLG T+ FPC +LP P G+D + D +V+WG+TYG+V L
Sbjct: 26 ARKASVAAVLRVDGDRIRLLFIRRAVNPRDRWSGQIAFPGGKCEANETSLETAIREAREEVGLDLASAT--LLGQL-PVRAATSGNTMVVSTHVFLWTEMAAPAFTLQTSEVSAAFWVDVEHVLTARL-RELRIPLDAM---RRRTNEAPYLHRMLRLLGWSTIAFPCIYLPLP----HQRGNDDERSDRGAD------EYVLWGLTYGMVLDL 222
BLAST of mRNA_P-littoralis_Contig197.36.3 vs. uniprot
Match: A0A067D8E3_SAPPC (Nudix hydrolase domain-containing protein n=2 Tax=Saprolegnia TaxID=4769 RepID=A0A067D8E3_SAPPC) HSP 1 Score: 123 bits (308), Expect = 7.870e-28 Identity = 86/228 (37.72%), Postives = 119/228 (52.19%), Query Frame = 1
Query: 340 RRASLSLLLREVEG---KVEMLVIKRVVNPRDKWSGHIALPGGRHEAGETELQTAVRECQEEVGISLVSSRFELLGRLGDSRTSTSKDALTVSCFVFVQTDKAETPVTVQPSEVAFAWWVDTAMFYPDPVKREAGFPVTGMVKVARKPHWKASCCALMWLLGAETVF----FPCFFLPPPPLLGQPAGHDSTTASICVDYPFDAKTFVMWGMTYGVVSRLAVAGGGDA 1002
+RAS++ L R G ++++L I+R VNP D WSGHIA PGGR + E +L +A RE +EE+G+ L F L+G+L D V+ FVF + +T++PSEVA A WVD A P++ PV + W + +L+ L T F FPC +LP P + D+TT P A FV+WG+TY +VS L VAGG DA
Sbjct: 26 KRASVAALFRHAPGPNPRLQLLFIRRCVNPSDTWSGHIAFPGGRTQPSEMDLDSASRETREEIGLDLDRDGFRLVGQLHDRPVHYGTTV--VASFVFQHDGRTPFKMTLEPSEVADAVWVDVAYLASAPIQ-SLEIPVEMIFP------WLTTYPSLLARLQESTFFKSIGFPCIYLPRP--TEEDDVVDATT-------PRQANDFVLWGLTYTMVSDLFVAGGLDA 235
BLAST of mRNA_P-littoralis_Contig197.36.3 vs. uniprot
Match: A0A1W0A9G9_9STRA (NUDIX family hydrolase n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1W0A9G9_9STRA) HSP 1 Score: 122 bits (307), Expect = 8.440e-28 Identity = 80/220 (36.36%), Postives = 117/220 (53.18%), Query Frame = 1
Query: 334 RSRRASLSLLLREVEGKVEMLVIKRVVNPRDKWSGHIALPGGRHEAGETELQTAVRECQEEVGISLVSSRFELLGRLGDSRTSTSKDALTVSCFVFVQTDKAETPVTVQPSEVAFAWWVDTAMFYPDPVKREAGFPVTGMVKVARKPHWKASCCALMWLLGAETVFFPCFFLPPPPLLGQPAGHDSTTASICVDYPFDAKTFVMWGMTYGVVSRLAVAGG 993
R RAS++ +LR +V++L I+R VNPRD+WSGHIA PGG+ E GET + TA+RE EE+G+ L S+ ++LG+L D L VS VF+ P +Q SEV+ +WVD A P + + P+ + K+ ++P + WL G+ V FPC +LP P HD + +V+WG+T+G+ L AGG
Sbjct: 23 RVPRASVAAVLRVDGDRVQLLFIRRAVNPRDRWSGHIAFPGGKAEEGETSVATAIREAHEEIGLDLSSA--QILGQLNDRVAH----KLIVSTHVFLLPSAKVPPFVLQTSEVSAVFWVDIAFLATSPPQTQ---PIP-LEKLIKRPSFYQR-----WL-GSSIVNFPCIYLP------SPVSHDQEQ---------NQDKYVLWGLTFGMTMDLLRAGG 211
BLAST of mRNA_P-littoralis_Contig197.36.3 vs. uniprot
Match: A0A067CX04_SAPPC (Nudix hydrolase domain-containing protein n=1 Tax=Saprolegnia parasitica (strain CBS 223.65) TaxID=695850 RepID=A0A067CX04_SAPPC) HSP 1 Score: 123 bits (308), Expect = 9.070e-28 Identity = 84/215 (39.07%), Postives = 122/215 (56.74%), Query Frame = 1
Query: 337 SRRASLSLLLREVEGKVEMLVIKRVVNPRDKWSGHIALPGGRHEAGETELQTAVRECQEEVGISLVSSRFELLGRLGDSRTSTSKDALTVSCFVFVQTDKAETPVTVQPSEVAFAWWVDTA-MFYPDPVKREAGFPVTGMVKVARKPHWKASCCALMWLLGAETVFFPCFFLPPPPLLGQPAGHDSTTASICVDYPFDAKTFVMWGMTYGVVSRL 978
+R AS++ +LR +V +L I+R VNPRD+WSG IA PGG+ EA ET L+TA+RE +EEVG+ L S+ + LG+L D R +TS + + VS VF+ + A ++Q SEV+ A+WVD + P RE + M+ R+ + L+ LLG T+ FPC +LP P Q D + A +V+WG+TYG+V L
Sbjct: 27 ARMASVAAVLRVDGDRVRLLFIRRAVNPRDRWSGQIAFPGGKCEANETSLETAMREAKEEVGLDLASATW--LGQLPD-RVATSGNKMVVSTHVFLWAETAAPSFSLQTSEVSAAFWVDVDHLLTARP--RELRIRLDAMM---RRTSEASLLHRLLCLLGWTTIKFPCIYLPLP---HQTCSDDEASHR-------GADEYVLWGLTYGMVLDL 223
BLAST of mRNA_P-littoralis_Contig197.36.3 vs. uniprot
Match: A0A7S2CMC3_9STRA (Hypothetical protein n=2 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2CMC3_9STRA) HSP 1 Score: 123 bits (308), Expect = 2.400e-27 Identity = 89/248 (35.89%), Postives = 130/248 (52.42%), Query Frame = 1
Query: 340 RRASLSLLLREVEGKV-EMLVIKRVVNPRDKWSGHIALPGGRHEAGETELQTAVRECQEEVGISLVSSRFELLGRLGDSRTSTS--KDALTVSCFVFVQTDKAETP-VTVQPSEVAFAWWVDTAMFYPDPVKREAGFPVTGMVKVARK----PHWKASCCALMWLLGAETVFFPCFFLPPPPLLGQPAGHDSTTASICVDYPFDAKTFVMWGMTYGVVSRLAVAGGGDAFARPGPPPFRFNSIGADFL 1059
RRA++S++LR E E+L+I+R NP+DKWSG IALPGG+ EAGE++L+ AVRE +EEVG+ ++ F+LLG+L D ++ K + +S F+F Q D P + +QP EVA AWW P + PVT + K RK P + + +L + +FF C + PP + +P + + F+MWG+T V S L G PG +R S ADF+
Sbjct: 50 RRAAVSVVLRLNENAATELLLIRRADNPQDKWSGDIALPGGKREAGESDLEAAVRETREEVGLDVIGGGFDLLGQLDDRMINSGGKKKKMVISVFIFGQRDGHPRPTLKIQPGEVASAWWA--------PFEELEATPVTELSKPFRKFMRLPF--PADTLVRDVLRCDQIFFSCLAVNPPSKVTKPE---------------EREKFIMWGITLRVFSDLVHRVRGRQLL-PGRT-YRLGSKAADFV 270
BLAST of mRNA_P-littoralis_Contig197.36.3 vs. uniprot
Match: A0A1V9YGX4_9STRA (NUDIX hydrolase n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9YGX4_9STRA) HSP 1 Score: 121 bits (303), Expect = 3.890e-27 Identity = 83/214 (38.79%), Postives = 121/214 (56.54%), Query Frame = 1
Query: 340 RRASLSLLLREVEGKVEMLVIKRVVNPRDKWSGHIALPGGRHEAGETELQTAVRECQEEVGISLVSSRFELLGRLGDSRTSTSKDALTVSCFVFVQTDKAETP-VTVQPSEVAFAWWVDTAMFYPDPVKREAGFPVTGMVKVARKPHWKASCCALMWLLGAETVFFPCFFLPPPPLLGQPAGHDSTTASICVDYPFDAKTFVMWGMTYGVVSRL 978
RRAS++ +LR +V +L I+R VNP+D+WSG IA PGG+ E ET LQTAVRE EEVG+ L + ++LG+L D R +TS + L VS VF+ A P +Q +E++ A+WVD P R+ P+T M++ C + L+G +V FPC +L P H +++ V P D +V+WG+TYG+V+ L
Sbjct: 26 RRASVAAVLRLDGDRVRLLFIRRAVNPKDRWSGQIAFPGGKSEGNETSLQTAVRETWEEVGLDLNGA--DVLGQLND-RVATSINKLIVSTHVFLLPVNAPVPPFQLQTTEISAAFWVDIHDIVHAP-SRQLYVPITSMMRRTNDSPVLYKC---LDLIGFSSVGFPCVYLASP-------SHPKDSSA--VREPHD---YVLWGLTYGMVTEL 220
BLAST of mRNA_P-littoralis_Contig197.36.3 vs. uniprot
Match: A0A0A7CPF8_9STRA (Secreted protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A0A7CPF8_9STRA) HSP 1 Score: 119 bits (298), Expect = 2.370e-24 Identity = 82/213 (38.50%), Postives = 120/213 (56.34%), Query Frame = 1
Query: 343 RASLSLLLREVEGKVEMLVIKRVVNPRDKWSGHIALPGGRHEAGETELQTAVRECQEEVGISLVSSRFELLGRLGDSRTSTSKDALTVSCFVFVQTDKAETP-VTVQPSEVAFAWWVDTAMFYPDPVKREAGFPVTGMVKVARKPHWKASCCALMWLLGAETVFFPCFFLPPPPLLGQPAGHDSTTASICVDYPFDAKTFVMWGMTYGVVSRL 978
RAS++ +LR +V +L I+R VNP+D+WSG IA PGG+ E ET LQTAVRE EEVG+ L + ++LG+L D R +TS + L VS VF+ A P +Q +E++ A+WVD P R+ P+T M++ C + L+G +V FPC +L P H +++ V P D +V+WG+TYG+V+ L
Sbjct: 278 RASVAAVLRLDGDRVRLLFIRRAVNPKDRWSGQIAFPGGKSEGNETSLQTAVRETWEEVGLDLNGA--DVLGQLND-RVATSINKLIVSTHVFLLPVNAPVPPFQLQTTEISAAFWVDIHDIVHAP-SRQLYVPITSMMRRTNDSPVLYKC---LDLIGFSSVGFPCVYLASP-------SHPKDSSA--VREPHD---YVLWGLTYGMVTEL 471
BLAST of mRNA_P-littoralis_Contig197.36.3 vs. uniprot
Match: A0A1V9Y5U5_9STRA (Nudix hydrolase domain-containing protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9Y5U5_9STRA) HSP 1 Score: 112 bits (279), Expect = 6.120e-24 Identity = 77/223 (34.53%), Postives = 113/223 (50.67%), Query Frame = 1
Query: 337 SRRASLSLLLRE---VEGKVEMLVIKRVVNPRDKWSGHIALPGGRHEAGETELQTAVRECQEEVGISLVSSRFELLGRLGDSRTSTSKDALTVSCFVFVQTDKAETPVTVQPSEVAFAWWVDTAMFYPDPVKREAGFPVTGMVKVARK-PHWKASCCALMWLLGAETVFFPCFFLPPPPLLGQPAGHDSTTASICVDYPFDAKTFVMWGMTYGVVSRLAVAGG 993
++RAS++ L R V+ ++++L+I+RVVNP D WSGH+A PGGR + GET+L +A RE EE+G+ L S L+G++ D VS FVF ++P+EV A WVD P++ PV + + P A +L ++ FPC +LP P A D T+ P FV+WG+TY ++S L AGG
Sbjct: 26 TKRASVAALFRHSPTVDSRLQLLLIRRVVNPADTWSGHMAFPGGRAKVGETDLDSACRETSEEIGLDLDSGAVHLVGQIDDRPVHYGTTV--VSSFVFYHDGSEPIAPKLEPTEVQDAVWVDVEYLATAPIQ-SLEIPVEHIFPWLKTYPFLLARLSTSKYL---SSISFPCIYLPRP--TDDAAAPDVTS-------PRPVHDFVLWGLTYTMLSDLLRAGG 233 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig197.36.3 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig197.36.3 >prot_P-littoralis_Contig197.36.3 ID=prot_P-littoralis_Contig197.36.3|Name=mRNA_P-littoralis_Contig197.36.3|organism=Pylaiella littoralis U1_48|type=polypeptide|length=349bp MVENLGGTTQLPACGDVSPSNLVERLRCSSTLRQPSLLEREWFDLRAPPGback to top mRNA from alignment at P-littoralis_Contig197:171993..176547+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig197.36.3 ID=mRNA_P-littoralis_Contig197.36.3|Name=mRNA_P-littoralis_Contig197.36.3|organism=Pylaiella littoralis U1_48|type=mRNA|length=4555bp|location=Sequence derived from alignment at P-littoralis_Contig197:171993..176547+ (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig197:171993..176547+ >mRNA_P-littoralis_Contig197.36.3 ID=mRNA_P-littoralis_Contig197.36.3|Name=mRNA_P-littoralis_Contig197.36.3|organism=Pylaiella littoralis U1_48|type=CDS|length=1047bp|location=Sequence derived from alignment at P-littoralis_Contig197:171993..176547+ (Pylaiella littoralis U1_48)back to top |