mRNA_P-littoralis_Contig196.93.1 (mRNA) Pylaiella littoralis U1_48

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-littoralis_Contig196.93.1
Unique NamemRNA_P-littoralis_Contig196.93.1
TypemRNA
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Homology
BLAST of mRNA_P-littoralis_Contig196.93.1 vs. uniprot
Match: D7G866_ECTSI (Kinesin motor domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G866_ECTSI)

HSP 1 Score: 917 bits (2370), Expect = 0.000e+0
Identity = 452/464 (97.41%), Postives = 459/464 (98.92%), Query Frame = 2
Query:  338 MSVSIKVAMRCRPYSIDDKLGVQMVQNGDEEGEVNLLNSDYTTNRFAFTYAWWSAYGFDRHIQSNHDEAEAMTLMNQEMVYTSVGKKIKADLYDGNAVVLFAYGLSGSGKTFTVFGPDAVDIPEAWFKHADPHPLWGIFPRLAYEMFKDKTDGWKITMKYFQNVVDTVRDLMSPVISEQHYKNGMKKDENGFMDIDWCSSKVLNDWDELRSVFMQANAKKAIAPTQFNHQSTRGHCIMTLEVERPHPDMAGMKQKGRVYVCDLAGTEPAGDIVFAKYEKKVFPNGDIEHKFIGAHEDDRKTKELQNQGMKINLSLTEMSQFFMKMAEAVKKKKLKPGASIPGCNSYFLCKFLKDTMLQARTYLFCAIRPEVKYHPYTFSTCNFAKNASVVKLQPKKAVAASSPAERKLMEELEQMKMMMDAMKAENEKLAAAGGGGEGDSKLQEMLAAKQAELMNVLASREGQE 1729
            MSVSIKVAMRCRP+SIDDKLGVQ++QNG+EEGEVNLLNSDYTTNRFAFTYAWWSAYGFDRHIQSN DEAEAMTLMNQEMVY+SVG KIK DLYDGNAVVLFAYGLSGSGKTFTVFGPDAVDIPEAWFKHA+PHPLWGIFPRLAYEMFKDKTDGWKITMKYFQNVVDTVRDLMSPVISEQHYKNGMKKDENGFMDIDWC SKVLNDWDELRSVFMQANAKKAIAPTQFNHQSTRGHCIMTLEVERPHPDMAGMKQKGRVYVCDLAGTEPAGDIVFAKY+KKVFPNGDIEHKFIGAHEDDRKTKELQNQGMKINLSLTEMSQFFMKMAEAVKKKKLKPGASIPGCNSYFLCKFLKDTMLQARTYLFCAIRPEVKYH YTFSTCNFAKNASVVKLQPKKAVAASSPAERKLMEELEQMKMMMDAMKAENEKLAAAGGGGEGDSKLQEMLAAKQAELMNVLASREGQE
Sbjct:    1 MSVSIKVAMRCRPFSIDDKLGVQLLQNGEEEGEVNLLNSDYTTNRFAFTYAWWSAYGFDRHIQSNQDEAEAMTLMNQEMVYSSVGTKIKDDLYDGNAVVLFAYGLSGSGKTFTVFGPDAVDIPEAWFKHAEPHPLWGIFPRLAYEMFKDKTDGWKITMKYFQNVVDTVRDLMSPVISEQHYKNGMKKDENGFMDIDWCCSKVLNDWDELRSVFMQANAKKAIAPTQFNHQSTRGHCIMTLEVERPHPDMAGMKQKGRVYVCDLAGTEPAGDIVFAKYDKKVFPNGDIEHKFIGAHEDDRKTKELQNQGMKINLSLTEMSQFFMKMAEAVKKKKLKPGASIPGCNSYFLCKFLKDTMLQARTYLFCAIRPEVKYHSYTFSTCNFAKNASVVKLQPKKAVAASSPAERKLMEELEQMKMMMDAMKAENEKLAAAGGGGEGDSKLQEMLAAKQAELMNVLASREGQE 464          
BLAST of mRNA_P-littoralis_Contig196.93.1 vs. uniprot
Match: A0A835Z2N0_9STRA (P-loop containing nucleoside triphosphate hydrolase protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z2N0_9STRA)

HSP 1 Score: 711 bits (1836), Expect = 7.460e-244
Identity = 349/470 (74.26%), Postives = 396/470 (84.26%), Query Frame = 2
Query:  338 MSVSIKVAMRCRPYSIDDKLGVQMVQNGDEEGEVNLLNSDYTTNRFAFTYAWWSAYGFDRHIQSNHDEAEAMTLMNQEMVYTSVGKKIKADLYDGNAVVLFAYGLSGSGKTFTVFGPDAVDIPEAWFKHADPHPLWGIFPRLAYEMFKDKTDGWKITMKYFQNVVDTVRDLMSPVISEQHYKNGMKKDENGFMDIDWCSSKVLNDWDELRSVFMQANAKKAIAPTQFNHQSTRGHCIMTLEVERPHPDMAGMKQKGRVYVCDLAGTEPAGDIVFAKYEKKVFPNGDIEHKFIGAHEDDRKTKELQNQGMKINLSLTEMSQFFMKMAEAVKKKKLKPGASIPGCNSYFLCKFLKDTMLQARTYLFCAIRPEVKYHPYTFSTCNFAKNASVVKLQPKKAVAASSPAERKLMEELEQMKMMMDAMKAENEKLAAAGGGGEGD------------SKLQEMLAAKQAELMNVLA 1711
            MSVSIKVA+RCRP++IDDKLGV ++QN DE GE+NLLNSDY+TNRF+F +AWWSAYG+ RHIQSN+ E +AM L+NQ+ VY   G KIK DL +GNAVVLFAYGLSGSGKTFTVFGPDA DIPEAWFKH++PHPLWGIFPRLAYE+F ++ DGWK+TMKYFQNVVDTVRDL+SP+  E+ YK GM+KD +GFMDI+WCSSKVLN WD+LR  FM+ANAKKAIAPTQFNHQSTRGHCIMTLEVE PHPD   MKQKGRVYVCDLAGTEPAGDIV+A YEK+VFPNG+IEHK++G H+D RKTKELQ QGMKINLSL+EM+QFFMKMAEAV  KKLKPG+SIPGCNSYFLCK+LKDTMLQARTYLFCAIRPE+ Y  YTFST  FAKNASVVKLQPKKA+ A+SPAERKLM+ELE MK M D ++ EN KL +                    S LQ MLAAKQAEL  + A
Sbjct:    1 MSVSIKVAIRCRPFTIDDKLGVHLLQNSDEAGEINLLNSDYSTNRFSFNWAWWSAYGYQRHIQSNNAEGDAMPLVNQQDVYNQCGLKIKTDLMEGNAVVLFAYGLSGSGKTFTVFGPDAPDIPEAWFKHSEPHPLWGIFPRLAYEIFAERKDGWKVTMKYFQNVVDTVRDLLSPMGEEKQYKAGMRKDPDGFMDIEWCSSKVLNSWDDLRHNFMEANAKKAIAPTQFNHQSTRGHCIMTLEVEMPHPDNPAMKQKGRVYVCDLAGTEPAGDIVYALYEKQVFPNGEIEHKYLGPHQDQRKTKELQAQGMKINLSLSEMAQFFMKMAEAVMAKKLKPGSSIPGCNSYFLCKYLKDTMLQARTYLFCAIRPELTYQNYTFSTLGFAKNASVVKLQPKKAMVAASPAERKLMQELEAMKAMFDQLREENMKLLSXXXXXXXXXXXXXXXXXXXTSALQAMLAAKQAELQAMEA 470          
BLAST of mRNA_P-littoralis_Contig196.93.1 vs. uniprot
Match: A0A8K1CKD3_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CKD3_PYTOL)

HSP 1 Score: 698 bits (1802), Expect = 4.370e-239
Identity = 343/474 (72.36%), Postives = 394/474 (83.12%), Query Frame = 2
Query:  338 MSVSIKVAMRCRPYSIDDKLGVQMVQNGDEEGEVNLLNSDYTTNRFAFTYAWWSAYGFDRHIQSNHDEAEAMTLMNQEMVYTSVGKKIKADLYDGNAVVLFAYGLSGSGKTFTVFGPDAVDIPEAWFKHADPHPLWGIFPRLAYEMFKDKTDGWKITMKYFQNVVDTVRDLMSPVISEQHYKNGMKKDENGFMDIDWCSSKVLNDWDELRSVFMQANAKKAIAPTQFNHQSTRGHCIMTLEVERPHPDMAGMKQKGRVYVCDLAGTEPAGDIVFAKYEKKVFPNGDIEHKFIGAHEDDRKTKELQNQGMKINLSLTEMSQFFMKMAEAVKKKKLKPGASIPGCNSYFLCKFLKDTMLQARTYLFCAIRPEVKYHPYTFSTCNFAKNASVVKLQPKKAVAASSPAERKLMEELEQMKMMMDAMKAENE---KLAAAG---------GGGEGDSKLQEMLAAKQAELMNVLASREG 1723
            MSV+IKV++RCRP++ DD+LGV + QNG+EEGEV L+NS Y+T RFAF+YAWWSAYGF+RH+  +  EA+ MTL+NQ+M Y SVG KIK DL  GNAVVLFAYGLSGSGKTFTVFGPDAVDIPEAWFKH  PHP+WGIFPRLAYE+F+DK DGWK++MKYFQNVVDTVRDLMSPV  EQ YK+GMKKD +GF DI+WC S VL DW++LR  FM ANA+KAIAPTQFNHQSTRGHCIMTLEVE+P P+  GMKQ+GRVYVCDLAGTEPAGDIV+A+Y+K VF NGDIEHK++G H D  K+KELQ+QG KINLSLTEM+QFFMKMAEAVK  KLKPG SIPGCNSYFLCK+LKDTMLQARTYLFCAIRPEVK+H YTFST  FAKNASV+KLQPKKA +A+SPAERKLM ELEQMK+++  +K ENE   KL AA             +  ++L EMLA KQ EL  VL    G
Sbjct:    1 MSVTIKVSIRCRPFTCDDQLGVVLSQNGEEEGEVQLINSTYSTTRFAFSYAWWSAYGFERHVLGDPPEAQQMTLINQQMAYDSVGLKIKEDLLGGNAVVLFAYGLSGSGKTFTVFGPDAVDIPEAWFKHEKPHPMWGIFPRLAYELFQDKQDGWKVSMKYFQNVVDTVRDLMSPVAQEQQYKSGMKKDPDGFTDIEWCQSVVLKDWNDLRRTFMAANARKAIAPTQFNHQSTRGHCIMTLEVEKPDPEREGMKQRGRVYVCDLAGTEPAGDIVYAEYKKVVFDNGDIEHKYLGPHPDPSKSKELQDQGKKINLSLTEMAQFFMKMAEAVKANKLKPGMSIPGCNSYFLCKYLKDTMLQARTYLFCAIRPEVKFHNYTFSTLGFAKNASVIKLQPKKASSAASPAERKLMAELEQMKLLVSQLKGENERMGKLRAAXXXXXXXXEDASSDQVNQLNEMLAQKQRELERVLTGESG 474          
BLAST of mRNA_P-littoralis_Contig196.93.1 vs. uniprot
Match: D0N3U6_PHYIT (Kinesin motor domain-containing protein n=17 Tax=Phytophthora TaxID=4783 RepID=D0N3U6_PHYIT)

HSP 1 Score: 693 bits (1788), Expect = 8.650e-238
Identity = 338/458 (73.80%), Postives = 388/458 (84.72%), Query Frame = 2
Query:  338 MSVSIKVAMRCRPYSIDDKLGVQMVQNGDEEGEVNLLNSDYTTNRFAFTYAWWSAYGFDRHIQSNHDEAEAMTLMNQEMVYTSVGKKIKADLYDGNAVVLFAYGLSGSGKTFTVFGPDAVDIPEAWFKHADPHPLWGIFPRLAYEMFKDKTDGWKITMKYFQNVVDTVRDLMSPVISEQHYKNGMKKDENGFMDIDWCSSKVLNDWDELRSVFMQANAKKAIAPTQFNHQSTRGHCIMTLEVERPHPDMAGMKQKGRVYVCDLAGTEPAGDIVFAKYEKKVFPNGDIEHKFIGAHEDDRKTKELQNQGMKINLSLTEMSQFFMKMAEAVKKKKLKPGASIPGCNSYFLCKFLKDTMLQARTYLFCAIRPEVKYHPYTFSTCNFAKNASVVKLQPKKAVAASSPAERKLMEELEQMKMMMDAMKAENEKLAAAGGGGEGDSKLQEMLAAKQAELMNVLA 1711
            MSVSIKV++RCRP++ DDKLGV M QNG+EEG+V L+NS Y+T RF F+YAWWSAYG+ RHIQ +  +A+ M L++Q+M Y SVG+KIKADL  GNAVVLFAYGLSGSGKTFTVFGPDAVDIPEAWFKH +PHPLWGIFPRLAYE+FK+K DGWKI+MKYFQNVVDTVRDLMSPV  EQ YK+GM+KD +GF DI+WC S VL DW++LR  FM ANAKKAIAPTQFNHQSTRGHCIMTLEVE+P P+  GMKQ+GRVYVCDLAGTEPAGDIV+A Y+K VF +G+IEHK++G H D  K+KELQ+QG KINLSLTEM+QFFMKMAEAVK  KLKPG SIPGCNSYFLCK+LKDTMLQARTYLFCAIRPEVK+H YTFST  FAKNASV+KLQPKKA  A+SPAERKLM ELEQMK ++  +K ENE  A         ++L E+L  KQ EL NVL+
Sbjct:    1 MSVSIKVSIRCRPFTCDDKLGVVMTQNGEEEGDVELINSTYSTTRFPFSYAWWSAYGYKRHIQGDSLQADNMILVDQQMAYESVGRKIKADLMGGNAVVLFAYGLSGSGKTFTVFGPDAVDIPEAWFKHEEPHPLWGIFPRLAYELFKEKQDGWKISMKYFQNVVDTVRDLMSPVAQEQQYKSGMRKDPDGFTDIEWCQSVVLKDWNDLRRTFMVANAKKAIAPTQFNHQSTRGHCIMTLEVEKPDPEREGMKQRGRVYVCDLAGTEPAGDIVYADYKKVVFEDGEIEHKYLGPHPDALKSKELQDQGKKINLSLTEMAQFFMKMAEAVKANKLKPGMSIPGCNSYFLCKYLKDTMLQARTYLFCAIRPEVKFHGYTFSTLGFAKNASVIKLQPKKASTAASPAERKLMAELEQMKALVSQLKDENEPSAQV-------AQLAELLNQKQKELENVLS 451          
BLAST of mRNA_P-littoralis_Contig196.93.1 vs. uniprot
Match: A0A1V9Z812_9STRA (Kinesin motor domain-containing protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9Z812_9STRA)

HSP 1 Score: 689 bits (1777), Expect = 1.440e-235
Identity = 336/467 (71.95%), Postives = 387/467 (82.87%), Query Frame = 2
Query:  338 MSVSIKVAMRCRPYSIDDKLGVQMVQNGDEEGEVNLLNSDYTTNRFAFTYAWWSAYGFDRHIQSNHDEAEAMTLMNQEMVYTSVGKKIKADLYDGNAVVLFAYGLSGSGKTFTVFGPDAVDIPEAWFKHADPHPLWGIFPRLAYEMFKDKTDGWKITMKYFQNVVDTVRDLMSPVISEQHYKNGMKKDENGFMDIDWCSSKVLNDWDELRSVFMQANAKKAIAPTQFNHQSTRGHCIMTLEVERPHPDMAGMKQKGRVYVCDLAGTEPAGDIVFAKYEKKVFPNGDIEHKFIGAHEDDRKTKELQNQGMKINLSLTEMSQFFMKMAEAVKKKKLKPGASIPGCNSYFLCKFLKDTMLQARTYLFCAIRPEVKYHPYTFSTCNFAKNASVVKLQPKKAVAASSPAERKLMEELEQMKMMMDAMKAENEKLAAAGG-----GGEGDSKLQEMLAAKQAELMNVLASREG 1723
            MSVSIKV +RCRP++IDD LGV M Q GDEEGEV L+NS Y+T RFAF++AWWSAYG+ RH++ +   A+ M L++Q M Y + G KIK DL  GNAVV+FAYGLSGSGKTFTVFGPDAVDIPEAWFKH +PHPLWGIFPRLAY +FK+K DGWKITMKYFQNVVDTVRDLMSP+  EQ YKNGM+KD +GFMDI+WC   VL DW++LR  FM ANA+KAIAPTQFNHQSTRGHCIMTLEVE+P P+  GMKQ+GRVYVCDLAGTEPAGDIV+A Y+K VF +G IE K++G H D  K+KELQ+QG KINLSLTEM+QFFMKMAEAV+KK LKPGASIPGCNSYFLCK+LKDTMLQARTYLFCA+RPEV YH YTFST  FAKNASV+KLQPKKA  A+SPAERKLM EL++MK ++  +KAENEK+A +GG     G E   +L E+LA KQ EL  VL    G
Sbjct:    1 MSVSIKVCIRCRPFTIDDTLGVVMSQKGDEEGEVELINSTYSTTRFAFSWAWWSAYGYKRHVKGDTLPADNMLLVDQSMAYDACGTKIKDDLLGGNAVVMFAYGLSGSGKTFTVFGPDAVDIPEAWFKHEEPHPLWGIFPRLAYNLFKEKQDGWKITMKYFQNVVDTVRDLMSPMAQEQQYKNGMRKDPDGFMDIEWCQGVVLKDWNDLRKTFMSANARKAIAPTQFNHQSTRGHCIMTLEVEKPDPEREGMKQRGRVYVCDLAGTEPAGDIVYANYQKIVFDDGTIEMKYLGPHPDASKSKELQDQGKKINLSLTEMAQFFMKMAEAVQKKTLKPGASIPGCNSYFLCKYLKDTMLQARTYLFCAVRPEVTYHGYTFSTLGFAKNASVIKLQPKKASTAASPAERKLMAELDEMKNLVAMLKAENEKMAKSGGXXXXDGSEQVDRLSELLAQKQRELEGVLTGESG 467          
BLAST of mRNA_P-littoralis_Contig196.93.1 vs. uniprot
Match: A0A024TQ17_9STRA (Kinesin motor domain-containing protein n=2 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024TQ17_9STRA)

HSP 1 Score: 687 bits (1773), Expect = 5.250e-235
Identity = 332/462 (71.86%), Postives = 386/462 (83.55%), Query Frame = 2
Query:  338 MSVSIKVAMRCRPYSIDDKLGVQMVQNGDEEGEVNLLNSDYTTNRFAFTYAWWSAYGFDRHIQSNHDEAEAMTLMNQEMVYTSVGKKIKADLYDGNAVVLFAYGLSGSGKTFTVFGPDAVDIPEAWFKHADPHPLWGIFPRLAYEMFKDKTDGWKITMKYFQNVVDTVRDLMSPVISEQHYKNGMKKDENGFMDIDWCSSKVLNDWDELRSVFMQANAKKAIAPTQFNHQSTRGHCIMTLEVERPHPDMAGMKQKGRVYVCDLAGTEPAGDIVFAKYEKKVFPNGDIEHKFIGAHEDDRKTKELQNQGMKINLSLTEMSQFFMKMAEAVKKKKLKPGASIPGCNSYFLCKFLKDTMLQARTYLFCAIRPEVKYHPYTFSTCNFAKNASVVKLQPKKAVAASSPAERKLMEELEQMKMMMDAMKAENEKLAAAG-----GGGEGDSKLQEMLAAKQAELMNVL 1708
            MSVSIKV +RCRP++IDD LGV M Q GDEEGEV L+NS Y+T RFAF+++WWSAYG+ RH++ +   A+ M L++Q M Y + G KIKADL  GNAVV+FAYGLSGSGKTFTVFGPDAVDIPEAWFKH +PHP+WGIFPRLAYE+FK+K DGWKITMKYFQNVVDTVRDLMSP+  EQ YKNGM+KD +GFMDI+WC   VL DW++LR  FM ANA+KAIAPTQFNHQSTRGHCIMTLEVE+P P+  GMKQ+GR+YVCDLAGTEPAGD+V+A Y+K  F +G IE K++G H D  K+KELQ+QG KINLSLTEM+QFFMKMAEAV+KK LKPGASIPGCNSYFLCK+LKDTMLQARTYLFCA+RPEV YH YTFST  FAKNASV+KLQPKKA  A+SPAERKLM EL++MK ++  +KAENEK+A  G      G E   KL E+LA KQ +L NVL
Sbjct:    1 MSVSIKVCIRCRPFTIDDTLGVIMTQKGDEEGEVELINSSYSTTRFAFSWSWWSAYGYKRHVKGDTLPADNMLLVDQTMAYEACGSKIKADLLGGNAVVMFAYGLSGSGKTFTVFGPDAVDIPEAWFKHEEPHPMWGIFPRLAYELFKEKQDGWKITMKYFQNVVDTVRDLMSPMAQEQQYKNGMRKDPDGFMDIEWCQGVVLKDWNDLRKTFMSANARKAIAPTQFNHQSTRGHCIMTLEVEKPDPEREGMKQRGRIYVCDLAGTEPAGDVVYANYQKIQFDDGTIEMKYLGPHPDPAKSKELQDQGKKINLSLTEMAQFFMKMAEAVQKKTLKPGASIPGCNSYFLCKYLKDTMLQARTYLFCAVRPEVTYHNYTFSTLGFAKNASVIKLQPKKASTAASPAERKLMAELDEMKNLVAMLKAENEKMAKGGXXXXAAGAEQVDKLSELLAMKQKQLENVL 462          
BLAST of mRNA_P-littoralis_Contig196.93.1 vs. uniprot
Match: K3X4F7_GLOUD (Kinesin motor domain-containing protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3X4F7_GLOUD)

HSP 1 Score: 684 bits (1764), Expect = 1.120e-234
Identity = 339/475 (71.37%), Postives = 391/475 (82.32%), Query Frame = 2
Query:  338 MSVSIKVAMRCRPYSIDDKLGVQMVQNGDEEGEVNLLNSDYTTNRFAFTYAWWSAYGFDRHIQSNHDEAEAMTLMNQEMVYTSVGKKIKADLYDGNAVVLFAYGLSGSGKTFTVFGPDAVDIPEAWFKHADPHPLWGIFPRLAYEMFKDKTDGWKITMKYFQNVVDTVRDLMSPVISEQHYKNGMKKDENGFMDIDWCSSKVLNDWDELRSVFMQANAKKAIAPTQFNHQSTRGHCIMTLEVERPHPDMAGMKQKGRVYVCDLAGTEPAGDIVFAKYEKKVFPNGDIEHKFIGAHEDDRKTKELQNQGMKINLSLTEMSQFFMKMAEAVKKKKLKPGASIPGCNSYFLCKFLKDTMLQARTYLFCAIRPEVKYHPYTFSTCNFAKNASVVKLQPKKAVAASSPAERKLMEELEQMKMMMDAMKAENEKLAAA------GGG----GEGDS--------KLQEMLAAKQAELMNVL 1708
            MSVSIKV++RCRP++ DDKLGV + Q+ +EEGEV L+NS Y+T RF F+YAWWSAYG+ RH+Q +  E   MTL++Q+  Y SVG KIK+DL  GNAVVLFAYGLSGSGKTFTVFGPDAVDIPEAWFKH +P PLWGIFPRLAYE+FK+K DGWKI+MKYFQNVVDTVRDLMSPV  EQ YK+GM+KD +GF DI+WC S VL DW++LR  FM ANAKKAIAPTQFNHQSTRGHCIMTLEVE+P P+  GMKQ+GRVYVCDLAGTEPAGDIV+A+Y+K VF NG+IEHK+IG H D  K+KELQ+QG KINLSLTEM+QFFMKMAEAVK  KLKPG SIPGCNSYFLCK+LKDTMLQARTYLFCAIRPEVK+H YTFST  FAKNASV+KLQPKKA AA+S AERKLM ELEQMKM+++ +K ENE++A        GGG    G  +S        +L E+L  KQ EL  V+
Sbjct:    1 MSVSIKVSVRCRPFTCDDKLGVVLTQSAEEEGEVQLINSTYSTTRFGFSYAWWSAYGYQRHVQGDPPEVNQMTLIDQQAAYDSVGLKIKSDLLSGNAVVLFAYGLSGSGKTFTVFGPDAVDIPEAWFKHEEPQPLWGIFPRLAYELFKEKQDGWKISMKYFQNVVDTVRDLMSPVAQEQQYKSGMRKDADGFTDIEWCQSVVLKDWNDLRKNFMAANAKKAIAPTQFNHQSTRGHCIMTLEVEKPDPEREGMKQRGRVYVCDLAGTEPAGDIVYAEYKKIVFDNGEIEHKYIGPHPDASKSKELQDQGKKINLSLTEMAQFFMKMAEAVKANKLKPGVSIPGCNSYFLCKYLKDTMLQARTYLFCAIRPEVKFHGYTFSTLGFAKNASVIKLQPKKASAAASAAERKLMAELEQMKMLVNQLKEENERMAKIRAERGDGGGAVIAGHDESDMDTSQVDQLSELLNMKQRELEKVV 475          
BLAST of mRNA_P-littoralis_Contig196.93.1 vs. uniprot
Match: W4GK14_9STRA (Kinesin motor domain-containing protein n=9 Tax=Aphanomyces astaci TaxID=112090 RepID=W4GK14_9STRA)

HSP 1 Score: 684 bits (1765), Expect = 7.680e-234
Identity = 329/451 (72.95%), Postives = 382/451 (84.70%), Query Frame = 2
Query:  338 MSVSIKVAMRCRPYSIDDKLGVQMVQNGDEEGEVNLLNSDYTTNRFAFTYAWWSAYGFDRHIQSNHDEAEAMTLMNQEMVYTSVGKKIKADLYDGNAVVLFAYGLSGSGKTFTVFGPDAVDIPEAWFKHADPHPLWGIFPRLAYEMFKDKTDGWKITMKYFQNVVDTVRDLMSPVISEQHYKNGMKKDENGFMDIDWCSSKVLNDWDELRSVFMQANAKKAIAPTQFNHQSTRGHCIMTLEVERPHPDMAGMKQKGRVYVCDLAGTEPAGDIVFAKYEKKVFPNGDIEHKFIGAHEDDRKTKELQNQGMKINLSLTEMSQFFMKMAEAVKKKKLKPGASIPGCNSYFLCKFLKDTMLQARTYLFCAIRPEVKYHPYTFSTCNFAKNASVVKLQPKKAVAASSPAERKLMEELEQMKMMMDAMKAENEKLAAAGGGGEGDS----KLQEMLA 1678
            MSVSIKV +RCRP++IDD LGV M Q GDEEGEV L+NS Y+T RFAF+++WWSAYG+ RH++ +   A+ M L++Q M Y + G KIKADL  GNAVVLFAYGLSGSGKTFTVFGPDAVDIPEAWFKH +PHP+WGIFPRLAYE+FK+K DGWKITMKYFQNVVDTVRDLMSP+  EQ YK+GM+KD +GFMDI+WC   VL DW++LR  FM AN++KAIAPTQFNHQSTRGHCIMTLEVE+P PD  GMKQ+GR+YVCDLAGTEPAGD+V+A Y+K  F +G IE K++G H D  K+KELQ+QG KINLSLTEM+QFFMKMAEAV+KK LKPGASIPGCNSYFLCK+LKDTMLQARTYLFCA+RPEV YH YTFST  FAKNASV+KLQPKKA  A+SPAERKLM EL++MK ++  +KAENEK+A AGGG  G S    KL E+LA
Sbjct:    1 MSVSIKVCIRCRPFTIDDTLGVVMTQKGDEEGEVELINSSYSTTRFAFSWSWWSAYGYKRHVKGDPLPADNMLLVDQTMAYEACGNKIKADLLGGNAVVLFAYGLSGSGKTFTVFGPDAVDIPEAWFKHEEPHPMWGIFPRLAYELFKEKQDGWKITMKYFQNVVDTVRDLMSPMAQEQQYKSGMRKDPDGFMDIEWCQGVVLKDWNDLRRTFMSANSRKAIAPTQFNHQSTRGHCIMTLEVEKPDPDREGMKQRGRIYVCDLAGTEPAGDVVYANYQKIQFDDGTIEMKYLGPHSDPAKSKELQDQGKKINLSLTEMAQFFMKMAEAVQKKTLKPGASIPGCNSYFLCKYLKDTMLQARTYLFCAVRPEVTYHNYTFSTLGFAKNASVIKLQPKKASTAASPAERKLMAELDEMKNLVSMLKAENEKMAKAGGGSGGGSEQVDKLSELLA 451          
BLAST of mRNA_P-littoralis_Contig196.93.1 vs. uniprot
Match: A0A485LP98_9STRA (Aste57867_24057 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485LP98_9STRA)

HSP 1 Score: 683 bits (1763), Expect = 2.010e-233
Identity = 337/479 (70.35%), Postives = 391/479 (81.63%), Query Frame = 2
Query:  338 MSVSIKVAMRCRPYSIDDKLGVQMVQNGDEEGEVNLLNSDYTTNRFAFTYAWWSAYGFDRHIQSNHDEAEAMTLMNQEMVYTSVGKKIKADLYDGNAVVLFAYGLSGSGKTFTVFGPDAVDIPEAWFKHADPHPLWGIFPRLAYEMFKDKTDGWKITMKYFQNVVDTVRDLMSPVISEQHYKNGMKKDENGFMDIDWCSSKVLNDWDELRSVFMQANAKKAIAPTQFNHQSTRGHCIMTLEVERPHPDMAGMKQKGRVYVCDLAGTEPAGDIVFAKYEKKVFPNGDIEHKFIGAHEDDRKTKELQNQGMKINLSLTEMSQFFMKMAEAVKKKKLKPGASIPGCNSYFLCKFLKDTMLQARTYLFCAIRPEVKYHPYTFSTCNFAKNASVVKLQPKKAVAASSPAERKLMEELEQMKMMMDAMKAENEKLAAAGGG------------GEGDSKLQEMLAAKQAELMNVLASREGQEGEG 1738
            MSVSIKV +RCRP++IDDKLGV M Q GDEEGEV L+NS Y+T RFAF++AWWSAYG+ RH+Q +   A+ M L +Q M Y + G KIK DL  GNAVV+FAYGLSGSGKTFTVFGPDAVDIPEAWFKH +PHPLWGIFPRLAY++FK+K DGWKITMKYFQNVVDTVRDLMSP+  EQ YKNGM+KD +GFMDI+WC   VL DW++LR  FM AN++KAIAPTQFNHQSTRGHCIMTLEVE+P P+  GMKQ+GRVYVCDLAGTEPAGDIV+A Y+K VF +G IE KF+GAH D  K+KELQ+QG KINLSLTEM+QFFMKMAEAV+KK LKPGASIPGCNSYFLCK+LKDTMLQARTYLFCA+RPEV YH YTFST  FAKNASV+KLQPKKA  A+SPAERKLM EL++MK ++  +KAENEK+   G               +   KL E+LA KQ +L  VL + +G +G+G
Sbjct:    1 MSVSIKVCIRCRPFTIDDKLGVVMSQKGDEEGEVELINSTYSTTRFAFSWAWWSAYGYKRHVQGDTLPADNMLLTDQTMAYDACGLKIKNDLLGGNAVVMFAYGLSGSGKTFTVFGPDAVDIPEAWFKHEEPHPLWGIFPRLAYDLFKEKQDGWKITMKYFQNVVDTVRDLMSPMAQEQQYKNGMRKDPDGFMDIEWCQGVVLKDWNDLRRTFMSANSRKAIAPTQFNHQSTRGHCIMTLEVEKPDPEREGMKQRGRVYVCDLAGTEPAGDIVYANYQKLVFDDGSIEMKFLGAHPDPAKSKELQDQGKKINLSLTEMAQFFMKMAEAVQKKTLKPGASIPGCNSYFLCKYLKDTMLQARTYLFCAVRPEVTYHGYTFSTLGFAKNASVIKLQPKKASTAASPAERKLMAELDEMKNLVAMLKAENEKMTKGGXXXXXXXXXXXXXXSDQVDKLNELLAMKQRQLEGVL-NGDGDDGDG 478          
BLAST of mRNA_P-littoralis_Contig196.93.1 vs. uniprot
Match: D7G5B6_ECTSI (Kinesin motor domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G5B6_ECTSI)

HSP 1 Score: 688 bits (1775), Expect = 1.290e-232
Identity = 330/425 (77.65%), Postives = 371/425 (87.29%), Query Frame = 2
Query:  338 MSVSIKVAMRCRPYSIDDKLGVQMVQNGDEEGEVNLLNSDYTTNRFAFTYAWWSAYGFDRHIQSNHDEAEAMTLMNQEMVYTSVGKKIKADLYDGNAVVLFAYGLSGSGKTFTVFGPDAVDIPEAWFKHADPHPLWGIFPRLAYEMFKDKTDGWKITMKYFQNVVDTVRDLMSPVISEQHYKNGMKKDENGFMDIDWCSSKVLNDWDELRSVFMQANAKKAIAPTQFNHQSTRGHCIMTLEVERPHPDMAGMKQKGRVYVCDLAGTEPAGDIVFAKYEKKVFPNGDIEHKFIGAHEDDRKTKELQNQGMKINLSLTE--MSQFFMKMAEAVKKKKLKPGASIPGCNSYFLCKFLKDTMLQARTYLFCAIRPEVKYHPYTFSTCNFAKNASVVKLQPKKAVAASSPAERKLMEELEQMKMMMDAMK 1606
            MSVSIKVA+RCRP++IDD LGV + Q+G+EEGE+++LNS Y+T RFAFTYAWWSAYGF RH+++N  EA  M L++QE VY SVGKKIKADL  GNAVVLFAYGLSGSGKTFTVFGPDAVD PEAWFKH +PHPLWGIFPRLAYE+F++K DGWKITMKYFQNVVDTVRDLMSPV  E HYKNGMKKD +GF DIDWCSS VLN WD+LR  F  ANA+KAIAPTQFNHQSTRGHCIMTLEVE PHPDM GMKQKGRVYVCDLAGTEPAGDIV+A YEKK F  GDIE+KF+G H+D RKTKELQ+QG KINLSL+E  M+QFFMKMAEAV+K  LKPG SIPGCNSYFLCK+LKDTMLQARTYLFCAIRPEV YH YTF+T  FAKNASVVKL+PK A   ++ AE+KLMEELEQMK +++ ++
Sbjct:    1 MSVSIKVAVRCRPFTIDDNLGVNLTQSGEEEGEIDILNSAYSTTRFAFTYAWWSAYGFSRHVKNNATEAAEMELIDQEKVYLSVGKKIKADLLTGNAVVLFAYGLSGSGKTFTVFGPDAVDEPEAWFKHGEPHPLWGIFPRLAYEVFQEKKDGWKITMKYFQNVVDTVRDLMSPVGKEMHYKNGMKKDADGFTDIDWCSSAVLNSWDDLRQAFRAANARKAIAPTQFNHQSTRGHCIMTLEVEMPHPDMPGMKQKGRVYVCDLAGTEPAGDIVYALYEKKTFDGGDIEYKFLGPHQDQRKTKELQDQGKKINLSLSEVQMAQFFMKMAEAVQKNTLKPGGSIPGCNSYFLCKYLKDTMLQARTYLFCAIRPEVTYHKYTFATLGFAKNASVVKLKPKMATVKATLAEKKLMEELEQMKALVEQLR 425          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig196.93.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G866_ECTSI0.000e+097.41Kinesin motor domain-containing protein n=2 Tax=Ec... [more]
A0A835Z2N0_9STRA7.460e-24474.26P-loop containing nucleoside triphosphate hydrolas... [more]
A0A8K1CKD3_PYTOL4.370e-23972.36Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
D0N3U6_PHYIT8.650e-23873.80Kinesin motor domain-containing protein n=17 Tax=P... [more]
A0A1V9Z812_9STRA1.440e-23571.95Kinesin motor domain-containing protein n=1 Tax=Ac... [more]
A0A024TQ17_9STRA5.250e-23571.86Kinesin motor domain-containing protein n=2 Tax=Ap... [more]
K3X4F7_GLOUD1.120e-23471.37Kinesin motor domain-containing protein n=1 Tax=Gl... [more]
W4GK14_9STRA7.680e-23472.95Kinesin motor domain-containing protein n=9 Tax=Ap... [more]
A0A485LP98_9STRA2.010e-23370.35Aste57867_24057 protein n=1 Tax=Aphanomyces stella... [more]
D7G5B6_ECTSI1.290e-23277.65Kinesin motor domain-containing protein n=1 Tax=Ec... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig196contigP-littoralis_Contig196:410664..419993 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Pylaiella littoralis U1_48 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start1
Seed ortholog2880.D7G866
Preferred nameSTARD9
PFAMsAminotran_3,C2,FHA,Kinesin,START
Model size1745
Max annot lvl2759|Eukaryota
KEGG koko:K11511,ko:K16491,ko:K17916
KEGG Pathwayko03460,map03460
Hectar predicted targeting categoryother localisation
Exons11
Evalue0.0
EggNOG OGsCOG5059@1|root,KOG0245@2759|Eukaryota
Descriptionmicrotubule motor activity
Cds size1407
COG categoryZ
BRITEko00000,ko00001,ko03036,ko03400,ko04812
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig196.93.1prot_P-littoralis_Contig196.93.1Pylaiella littoralis U1_48polypeptideP-littoralis_Contig196 410664..417662 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789942.7307086-CDS-P-littoralis_Contig196:410663..4107081680789942.7307086-CDS-P-littoralis_Contig196:410663..410708Pylaiella littoralis U1_48CDSP-littoralis_Contig196 410664..410708 -
1680789942.7452033-CDS-P-littoralis_Contig196:411179..4112931680789942.7452033-CDS-P-littoralis_Contig196:411179..411293Pylaiella littoralis U1_48CDSP-littoralis_Contig196 411180..411293 -
1680789942.7579029-CDS-P-littoralis_Contig196:411901..4120701680789942.7579029-CDS-P-littoralis_Contig196:411901..412070Pylaiella littoralis U1_48CDSP-littoralis_Contig196 411902..412070 -
1680789942.7691107-CDS-P-littoralis_Contig196:412782..4129461680789942.7691107-CDS-P-littoralis_Contig196:412782..412946Pylaiella littoralis U1_48CDSP-littoralis_Contig196 412783..412946 -
1680789942.7781143-CDS-P-littoralis_Contig196:414082..4143191680789942.7781143-CDS-P-littoralis_Contig196:414082..414319Pylaiella littoralis U1_48CDSP-littoralis_Contig196 414083..414319 -
1680789942.788959-CDS-P-littoralis_Contig196:414896..4150681680789942.788959-CDS-P-littoralis_Contig196:414896..415068Pylaiella littoralis U1_48CDSP-littoralis_Contig196 414897..415068 -
1680789942.7991793-CDS-P-littoralis_Contig196:415466..4156001680789942.7991793-CDS-P-littoralis_Contig196:415466..415600Pylaiella littoralis U1_48CDSP-littoralis_Contig196 415467..415600 -
1680789942.8098962-CDS-P-littoralis_Contig196:416058..4162321680789942.8098962-CDS-P-littoralis_Contig196:416058..416232Pylaiella littoralis U1_48CDSP-littoralis_Contig196 416059..416232 -
1680789942.8201542-CDS-P-littoralis_Contig196:416780..4169601680789942.8201542-CDS-P-littoralis_Contig196:416780..416960Pylaiella littoralis U1_48CDSP-littoralis_Contig196 416781..416960 -
1680789942.8318515-CDS-P-littoralis_Contig196:417644..4176621680789942.8318515-CDS-P-littoralis_Contig196:417644..417662Pylaiella littoralis U1_48CDSP-littoralis_Contig196 417645..417662 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789942.8456657-UTR-P-littoralis_Contig196:417662..4177731680789942.8456657-UTR-P-littoralis_Contig196:417662..417773Pylaiella littoralis U1_48UTRP-littoralis_Contig196 417663..417773 -
1680789942.8606684-UTR-P-littoralis_Contig196:419767..4199931680789942.8606684-UTR-P-littoralis_Contig196:419767..419993Pylaiella littoralis U1_48UTRP-littoralis_Contig196 419768..419993 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-littoralis_Contig196.93.1

>prot_P-littoralis_Contig196.93.1 ID=prot_P-littoralis_Contig196.93.1|Name=mRNA_P-littoralis_Contig196.93.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=469bp
MSVSIKVAMRCRPYSIDDKLGVQMVQNGDEEGEVNLLNSDYTTNRFAFTY
AWWSAYGFDRHIQSNHDEAEAMTLMNQEMVYTSVGKKIKADLYDGNAVVL
FAYGLSGSGKTFTVFGPDAVDIPEAWFKHADPHPLWGIFPRLAYEMFKDK
TDGWKITMKYFQNVVDTVRDLMSPVISEQHYKNGMKKDENGFMDIDWCSS
KVLNDWDELRSVFMQANAKKAIAPTQFNHQSTRGHCIMTLEVERPHPDMA
GMKQKGRVYVCDLAGTEPAGDIVFAKYEKKVFPNGDIEHKFIGAHEDDRK
TKELQNQGMKINLSLTEMSQFFMKMAEAVKKKKLKPGASIPGCNSYFLCK
FLKDTMLQARTYLFCAIRPEVKYHPYTFSTCNFAKNASVVKLQPKKAVAA
SSPAERKLMEELEQMKMMMDAMKAENEKLAAAGGGGEGDSKLQEMLAAKQ
AELMNVLASREGQEGEGGG
back to top

mRNA from alignment at P-littoralis_Contig196:410664..419993-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-littoralis_Contig196.93.1 ID=mRNA_P-littoralis_Contig196.93.1|Name=mRNA_P-littoralis_Contig196.93.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=9330bp|location=Sequence derived from alignment at P-littoralis_Contig196:410664..419993- (Pylaiella littoralis U1_48)
CAGCTGTTCACCTGCCTGTAGTACAGCAGTCACTCCTACTCGTGTGGTGT GTGATGCAATGTAGCTGCACTGTTTGCTGTGTGCTATGCAGCGTGAAGCG TGTAGTGGTGCACAGGAGCAGTGCTGTTTGCGGTGTGTGATCCTCTCCCA CTATCCCAGCGGAGAGCTCTACACGATATCTCACACACACTACTACTACA GCAGCTGCTCTACTGCTGTACTGCTGGTGAGAGAGGTGGAGGGGCTGTAT TGCGTGTTACCCAGTGTGGCGGGGGAGGGGTTGTGACGCGACACATGTCG GGACGCAATAGCCGCACTAAAGTTCGGGGTCAAAGGTGCCTTCGACTACG TACTATTCGTCGAGTTGAAACAAAAAAACGTTGTCACTTCGTTCTCATTT CAAAGTTCGTTCCCATTTTTCTTGTCACCGTGTTGATAGCCCCCCTCGAT TCCTGTAAATGATATCGCTGGTTTTGACACCAGCCCCTGGCCCGACAATC GGAAGTCTGACGTCTCTAAAGGACGGCAACTACATTTTTTTAAAGCACTT GGCATCCACGTTTGAGACGTATTTTGTTTTTTTCATAGCCCCATTCCTCG TCTTGCAACGCCATGAAACGTTCGTACATAAAAGAACATCGCTGGTTGTG GGAGGTAGGTGCTATCGCGGAACGACTCATATGCAGCACGCACTGGCAAG CGATAGACATCGATTTATTTTTCATTCCATGTTGGAACGCCCAACAAGCA TCGATACGATTCTCCGTCCATTTCGACCCGTTCAACAGCTATCGACATGT TCTTGGTGACCCTATTGAAAAATCCGTCAGGTATCGATACGCTCTCTTCA AATATATTGCGAAGTTGAATAGGTTCCGATATGATGTCTCAACGCATATT GCAGAATCCAACAGCTTCCGATATGATTTCAATGACCCCTATTGACAAAC AATAACTTCCGATAGGCATCCCAACACCTATTGGAATATCCACCACGTAT CGATCGATGATTGCAATACCCATTGAAGTGACCAATTGTATCGATAAACG GTTGCAATACCCATTGGAATGACCAACATGTATCAATATGTGGTCGCAAT GCATATTGAAATGACCAATAGGTAACGATAGGCTACTTGAAGACCTTTTG GGAGTCCAATATGCCTATTCAAACGGCTATTGTCCAAGGTGTGATATACA AGCGACAAGTGCATGATATGATACAGTAGCACTGAAATGCTGTTGTATTC TTGTTCCCATTGTGAATGACTTGCATGAAGTATTGGGTTTTGGATGAGGC CTTCTGCTCCGGCAATCGGACCTTCCTATACTTCGATCAGCTGCTCTCGT ATTCCTCTAAAATGATGTTGTATTTACCGATCACCTTGTATCTGACATTC ACGCGTGAGTTCGAATCCCAGTGCAGTAACACGATCTGGGTTTTCTTCTC ACAATGCGCGTGAAAGTGGAAGCGATTAATTCGGGAGTAAACTCAAGTCG ATCGTACCATCGACGAGGGAAAGGGTTCTCGTGGTAAATGCTCAACCAAA AACAAGGCAAGCACCGAAGAGGGAAGTGGAGAAAAAAAAAGTCCTGTGTT GACTTCCCCCTGTGTAACCCCAGTTGGAGCGTCGACCTACCCGAAAGGTG CAGAGTGGCGTCCAATTAAAGGGATGACAACACACACACACTTGTATCAT ACAGCAGCATCGTACACGTATACGTATGAGAGGACCCGAAGTATGCATGT GATCGATTTCTGTACGATTTGCTACTGTTTGTTTGATACACTTTTATCAT CAAAAGAGATACAGGCATCATACAACTCCACACTGCTGCGAATGCAGCAG TACAGCCTGCTGTATTGGCCGAGAAGAAAGTGATCAACCACGCTGCACGT GTTGCAATTACAAATACTTATACTTCCACATTCCAAATACAACTGCTCGT GAAGCAGTGGATCACCGGCAGGCTGATCTATCATATCATATGATACTGTG TACTGTACTCGTATGAATAGCTCATTGGAAAACAAAATGGACGTGGGCGT CTCTTTATCTATGCAAAAGAAAATCAAATCATTGTGTACGAGATCACATC CGCACACTGCGGCTGCTTCGTGCTACATACTACTGTAGAGAATATGTGAG ATTTGCGTGCTGTTTTTGTTCCGCTGCGCGCTGCGCGCACCCGTCCTCTT CTTGCTGTCGCCGCATGCAGCCGAAGGCGAAACATACCGGCCGGTGTAGA GCGAGGGCAACATCGAATAGTTCAAGCACCGTCCGTGACGCCGGCTACCT TTCCAGCGGGTTCTTTGAATAATTCGTCACCATGAGCGTCAGTATCAAGG TAACACGGAGTACCTGGTATACTTGAAGTATGTACGAAGTATCGTATGAT GCACGAAACCTACTTTTTATCGACACCGGCAACACCGACTTTTAGTGGGA GCCTCGTCGCTCGCACGAACCTCGGCACGGCGTCATCGCAGTAGGCAGCA GTTGTCACTTCCGTGCTGAACAAGCCGGGTGGGTAATGAGAACAACAAGG AGCGGCAGTGACTCGGCACGGACCCTCACCGTGTAATTGTTGTGAACCTC TCCGTTCTAAGGTGCCTTTCAAGGTATGGTAGGCTCTTCATGTCATACCG GCATCTCGATTTTTAAGCCCCCTAAAATCTATTGCCATGTTTTTGGAGAA ATTTGCTTCAAGAAAGTTTCCGGGACGGTGTGGCGTTGCGCGGTGCGGTC CTCTTTCTGCACCGCTCTGCTCGGGTGGACACTCTATGCCAAGTCGTGAT GCGAAATCGGTCTTGACCTACTCCATCGACGACATGGCGTTGCCACCTAG ATTACTCCGATATAGCAAGTAGAGCTGATTGTTGAACACGACTTAAGGCC ATTCTCGTCTCGTGCCGTTGTCGATACCCCCGATACTGCCGCCGTGTCGC ATCTTTTCTCCGGGGGGCGGGGGGGGGATGCGGTGCACATCGTGCCGGAT ATGGACATGAAACACCAACGGACGCACGCGAAGGTCGCGATGCGGTGTCG CCCCTACTCCATCGACGACAAGCTTGGCGTGCAGATGGTGCAGAACGGCG ACGAGGAAGGCGAGGTCAATCTACTCAACTCAGACTACACCACCAACCGG TTCGCCTTCACCTACGCCTGGTGGTCAGCCTACGGTTTCGACCGCCACAT CCAATCCAACCACGTGAGCAGAGCAGAGCGAAGTAGAGCGGGGCAGGGCA GGACCGGGGAGAGCAGGGTGGAGCAGAGCGAAGCAGCACAAAGATGGGAA CGGAAGAGCAGAGCAAAGCCGCGAGCCTAACAAAACAATCTCTCGTCAGT CGTGATCATTCCGTGCCGTGATGTCCCTGCCGTACCGGTACCCTTGCCTC GATTCAGTCACTGCAGAGACTGCACCAGTTTGCAAAAAATTCGATTCACG GACATCAGGACTTCATGCGTCGTACTCGATCATATCAAACATGTACAACG GCCAGTATCGGCCCAAACCAATCGAAACCAAAACTAGTCCACTCGAAGTT CCAAACCGAACCCAGCCAAAACCAAATCAACGAAACGCTAACCAAATCAT GACAGACCAACCCCAACAAGACCAAATCAAACCTAAACACAAGCAAAGCC GCGCAATAAAGTCGTCGAACCGAATTGCGCAAAGACGCGCAACAAAAAAC ACACCGAGTTAAGCGGAACGGAACAACTGTCTTCTGTGGGCGCGTTGTGA CTATTCGACAGGATGAGGCGGAGGCAATGACGCTCATGAATCAGGAGATG GTGTACACCTCAGTGGGCAAGAAGATCAAGGCCGATCTGTACGACGGCAA TGCCGTGGTCCTTTTCGCCTACGGCTTGTCCGGCTCAGGGAAAACCTTCA CCGTTTTCGGCCCCGATGCGGTCGACATCCCCGAGGTTTGATTGGATGCT CTCCAAAATCCTCGTGAAGCGAATATCATACGTGAACAGTATAGGGAAGT TGCGTGTGTGTGGTCGGGGGATTTCGAGAAGAGTTAAATCACATGAAATA AAGAACACCCACCCGAGAAGGGACTCCGTGGGATGTGTTGATTTCGTTCT TGCATTTCGGAAAGAAAGAGTGCGGGCAAGACCCCCCCCGGGATTTCTGG TGTTGGTAGGAGCTGTTATAGACCCTGTTGAAGACTGGGAATGACATGTC GATGACAAGTTACGGGGCATTTGTCAACACGTGTAGGAAGAGTTTTTCGA CAACGAGCATGAGAAGACGATCACAAATGAAAAGTGTCCGTGGGCTGCTG GATCATGCAGTGATTGCAAACGAGATGCCCTACGCCCCGGGGTTGCTAGG GTTCACCTGATGTAGCGTTGCATTGCATTGATTTGACTTGCAGGCGTGGT TCAAGCACGCGGATCCTCACCCCCTGTGGGGCATATTTCCCCGCCTGGCG TACGAGATGTTCAAAGACAAGACCGACGGCTGGAAGATCACGATGAAGTA TTTTCAGAACGTCGTGGACACGGTCAGGTGAGACAAGAGATGCAGCCGAA ACTACGGTGGCTTATTTTTTTGTCTTAGCTGTTGCTTATGGACGTGAATG TGACCCGCTGAGTTGCTGCTGCTGCTGCCCCTGCTGCTACCCCTGCTGTT GCCGTGCTGCCTAATGTTCACGCTAGCTTTTCAGGAGCGTGGGTTATCAC GCTAAAGGCCATGCACAGATTTGCTTTCCCCCCGAGTGTTTTCAAGGAGA AATGTGTGTTGTTGCAACCATGCGCTGTTCGCTTGTCTCCTGGCCCTTTC GTCTCGCGGTCCTCTACGGGCGGCGGTGCTGCCGTGCACCTCGTTTTTTT TTTGCCGTAAGAAAACTTGGTGCGCTGACCATAATCCTGTTTCAAATGAT TGCGACGGTCGGGGGGGCACATCAGGGATCTCATGTCCCCCGTGATTTCG GAACAGCACTACAAGAACGGCATGAAGAAGGACGAGAACGGTTTCATGGA CATCGACTGGTGTTCCAGCAAAGTTTTGAACGACTGGGACGAGCTTCGGT CTGTCTTCATGCAGGCTAACGCCAAGAAGGCCATCGCTCCAACACAAGTG GGTGCTCAGGGGTCGCGAGGTGTCGAATTCGCGACGTTGTTCCCGCGCCG CAAAGCGGACCGCCACGAGTGGCCTGTGTTGGTGTTGGTCGGCCGTTGTG GGTCTGCATGCCGTTTTGCCTTTCTGTCTGTCTGTCTCTCTGTCTGTCTG TCTGTCTGTCTGTCTGTCTGTCTGTCTGTCTCTCTGTCTCTCTGTCTCTC TGTCTCTCTGTCTCTCTGTCTCTCTGTCTGCCTGCTCGCCTTCTGGCATT GAGCAATTACCACTGCGTGATGTGTTGATTGCTTTGATGACATCGGGCTG CTTGCTCGTTTGTGCTGTGTGTGCTCTATACTTCCTTGCGGTCGCCACGG TCATGGTTGTTTTCGACGTCTCCACTCGTGCCTAGAGAGGCACCGCAAGC GCTCTAAAAATCAAGTTCACGCGATCTTCACGCTAACCTCCCCAAAATCT TGGTGGGACACATGTTTCGCCGCACATCCTTGTATGCCCTTATCTGCTGA TCCCCCGCCGTCCCCTCGGACGAAAACCCCCCCAACAACATCGCGATCAA ACATCGCGATCAAACCCGACAAAGTTCAACCACCAAAGCACCAGAGGGCA CTGCATCATGACCCTGGAGGTGGAAAGACCTCACCCCGACATGGCAGGCA TGAAGCAGAAGGGGAGGGTCTACGTGTGCGATCTGGCGGGCACAGAGCCG GCGGGGGACATCGTGTTCGCCAAGTACGAGAAGAAGGTCTTCCCTAACGG CGACATCGAGCACAAGTTTATCGGGGCGCACGAGGACGACCGCAAGACCA AGGAGTTGCAGGTGTCGTCGATTGTTTTGTTTCTGTTTGTTTGAAAAGGG GTGGTTTGGCCGATGATCGTACCAAAATAAATACATACTTCGAAGTACGT GTACATGATATGATAGTTACCGTTTGAGTCAAAGAGGTGATGGAGGTTTC CAATGCTTCGGCGGGCGGTTTCGAAACGTACCCTTGCACTTTTCAAACTT GCAAACTTGTTGGTGATGTGGTGATGTTCTCGGACGGACGTCGTGCGATT TGTTGATGGGACTTACAGAAAGCACAAGCCTTTTTTATTTCCCTGGGTTT CGATGCGTTGACAAATTGGAGAAAAAGAAAAAAGAGCGTCATCGGTCTCG AAAAAGAGTTGTCATCGTCCGAAGGCAGCGAACGGGCTGCTCCTCTTTCT CGGGACAAAACAGAACGGGCGTGGCCGAAGAAACTTGCTTGTGTGCGACT TGGCCGCTGAACTCGTCAGAAGAAAAAAGGCGATTTCGACGTTGGCTGTG GTTTCGTTTCGCTGCGGACCGCGCGCCCGTGCGTCAAGCGCGCACACCTC ACGAGCATTCCACTGCCTGTGCCCTGCCTCGCCGCTCTTCCCCCGTCGAC CTGCCGTTGTACTTTCAAGCGCCCAAGTGAAAACGCAAGCACTTGTATGA CAGAACACCAGCCTGTCGTAATTCAAAGGTCTCTCGTACGTACATCATGA CCTTTCGCCGTGCATTCTGCCTTGTCCCACCCCACTCCAAGACCAACACA TGCTGGTAAATGGTAAGGAATTGAGAACATCTCGTCGTTTTGACAGAAAT GTCCCGCTTCACCTCCTTTCATCCGTGTATGAAGAAAAGCCCTTCATTCT GACAGAAATGCCCCGCTTCCCTTCCTCCCAATCATGTACGTAAAGATAGC CCTTTATTTTGACAGAAATACCCCGCTTCCCCTCCTCCCATCCCTTATGA AGAAGGACCCGGCATCATGACAGCTGCTCGGCTCTCCTTTCTCCCATCGA TGTACATCAAAATAGCCCTTCATTTTGACAGAAATGCCCCGCTTCCCTTC CTCCCATTCATGGTTCAAGAACAGCCCGTCATTTTGACAGAAATCCCCCG CTTCACCTCCTCCCATCCGTGTATGGTTCGCGTCACACCTCTTTAAGAAC CAAGGCATGAAGATCAATTTGTCCTTGACGGAGATGTCTCAGTTCTTCAT GAAGATGGCGGAAGCGGTCAAGAAGAAGAAACTCAAGCCGGGAGCGTCCA TTCCCGGGTGCAACTCCTACTTCCTGTGCAAGTTTCTTAAGGACACCATG CTGCAGGCCAGGTATTGTTGATGCGGGTTCCCGTCTGCTTGTTTGGGGAT TCACGTATCATGAACTTTTTTTTCGCGCGCATCGATAGAACAGTATAAAC ATATGTTATACAAGTACTTTGAAGTACTTCATTAGTAAAGAAAACGGTTC AGGTATCACACCCATGCTCTCTCTCTTGAACACGCCCCGATTGCGGAGTC ACCACTGCTGTCCCAGAGAAGTAGTCTGCTGCTGCTGCTGCATCGTGGCA AACGCACCAATGGCACCAGTAGGTTTTGTGCACCCAGTCACTGCCTCCAC GCCCCCGCCTGGCTCTTTTGCTTTTTCAAATACTGTACACGTGGATGCGG CCAATGGCATGCAGGCACGACGGGCAGAATAAAATCGCTGTCGAAAATGC GGAGACACCGCCGACACCCCTACCCGGGCCTTCTAATAAGTTGTCAATCT TTACCGGGGTAAATGCCACACACATTTTTACACTTACCATTACACTTACA CACACGACAAGAAGCTGGATTTATTGCGTCCATTCTCCCCCATGGCTCTT GCACCCCCTGGGGGCTGGATCCCGGGTCGATGGCAGCGTTTTTGTACTCG ACGACCTATTAAAACCGATGTTTTTACGTCAAACAACCGGTTAGCTAGCA CGACGTCTTTATAGTGAGCGCAAAAGATTGCGGCAATGTTACAATGTCGA AAAGCGAAACAATACATTGACAGGACGTACCTGTTCTGCGCCATCCGACC GGAGGTGAAGTATCACCCCTACACATTCTCGACGTGTAACTTCGCCAAGA ACGCCTCGGTGGTGAAGCTCCAGCCCAAGAAGGCCGTCGCCGCCAGCTCC CCCGCTGAGCGCAAGCTCATGGAGGAGCTCGAGCAGATGAAGGTATGCGC ATACTTGAACTAGGGTCATCATGTAAGGGTTGCCCATTGTGGTGGGGTGG GTATGCGTGTATTAAGTGTGCGTTGCCATCCCATTCCTTGTGTGTTAGTC GCGCCGGCCGGGGCCACGCAGGAGGGGCATCAAGTGGGGTGGGAACGTGA AAGAGAGCTTAAATGTGGGCTTTTGAGCGGGGTCATGTTTCATCGTTTTT CGTAGTGGGGTGGGGGCGTGGGAAAGAGTTATTTGTTGAGCGCGAGCGAT TGAAACGTAGGTCAAATCGTACGCCCGGCTGTATAGGTCGTGGTTTGGTG CGACAAGTTTCTTTCGGCTGAGGGTGGTTGGTCCTCGGAGGGTGAATATG CTAGCTCACGGAAGAGCTCGAAGGGATAGTTTGAACACTCTTTTTCTTCG TGAGAGCAAACTCAAATGTGACGGGGGCAGAGGGCTTGAAGTAATGGGAA ACACCAGCTTGATTGGCTCCCAAGGTGTCGCTACGAGCTCGAGCAGCCTC AGAACGAAAGTGGTATACCTGGTACGTGTTTGAGTTGATTGGCACACACC CCGGTACTCGCCCTGATTCGCCGTGTCCGTGGCCCAAATATTTGCCGCAG ATGATGATGGACGCCATGAAGGCGGAGAACGAGAAGCTGGCGGCCGCCGG CGGGGGCGGGGAAGGAGATTCCAAGCTTCAGGAAATGCTCGCGGCGAAGC AGGCGGAGCTGATGGTGCGACTCTTTGGGGCTGTTTCCTCCTGGCTACTG CTTTGGACGTTTAGATTTCGAGTCGTGGCCTGCCAGATCCCACTACAAGA CCCATGAATACGTGTGAACATGCTTTCCGAATACCGTCATAGAGGGGATC TCGATTTTGTCGGTGCCGTCCATGGTGGGTCGAATCGGCGCAAGACTGAT GTTCCACCACTTTCGAAGACTTGCGAAAACTTCAACTCGACTCTCTCGCG CGACATAAGCTTCTACTTTAAGGTGGCCACGGGCTGCGAAAATGCACGCG TGGAGTTATTTCAGACAAAAAATGCACGATCAAGCGAGGAAAACGAGAGA AAATGTGACGAAACAGCATAGTGAGCAAACGTGTAAAACTCTTTGTCACC ACCACCACCACCACCACCACCCCCACCAACATCGTCATTATCGGCGTTTC CCTCCACCCTCTACCCCTCAACCGGAAAATGACAGAACGTGCTCGCGTCC CGTGAGGGGCAAGAAGGGGAGGGCGGGGGA
back to top

Coding sequence (CDS) from alignment at P-littoralis_Contig196:410664..419993-

>mRNA_P-littoralis_Contig196.93.1 ID=mRNA_P-littoralis_Contig196.93.1|Name=mRNA_P-littoralis_Contig196.93.1|organism=Pylaiella littoralis U1_48|type=CDS|length=1407bp|location=Sequence derived from alignment at P-littoralis_Contig196:410664..419993- (Pylaiella littoralis U1_48)
ATGAGCGTCAGTATCAAGGTCGCGATGCGGTGTCGCCCCTACTCCATCGA
CGACAAGCTTGGCGTGCAGATGGTGCAGAACGGCGACGAGGAAGGCGAGG
TCAATCTACTCAACTCAGACTACACCACCAACCGGTTCGCCTTCACCTAC
GCCTGGTGGTCAGCCTACGGTTTCGACCGCCACATCCAATCCAACCACGA
TGAGGCGGAGGCAATGACGCTCATGAATCAGGAGATGGTGTACACCTCAG
TGGGCAAGAAGATCAAGGCCGATCTGTACGACGGCAATGCCGTGGTCCTT
TTCGCCTACGGCTTGTCCGGCTCAGGGAAAACCTTCACCGTTTTCGGCCC
CGATGCGGTCGACATCCCCGAGGCGTGGTTCAAGCACGCGGATCCTCACC
CCCTGTGGGGCATATTTCCCCGCCTGGCGTACGAGATGTTCAAAGACAAG
ACCGACGGCTGGAAGATCACGATGAAGTATTTTCAGAACGTCGTGGACAC
GGTCAGGGATCTCATGTCCCCCGTGATTTCGGAACAGCACTACAAGAACG
GCATGAAGAAGGACGAGAACGGTTTCATGGACATCGACTGGTGTTCCAGC
AAAGTTTTGAACGACTGGGACGAGCTTCGGTCTGTCTTCATGCAGGCTAA
CGCCAAGAAGGCCATCGCTCCAACACAATTCAACCACCAAAGCACCAGAG
GGCACTGCATCATGACCCTGGAGGTGGAAAGACCTCACCCCGACATGGCA
GGCATGAAGCAGAAGGGGAGGGTCTACGTGTGCGATCTGGCGGGCACAGA
GCCGGCGGGGGACATCGTGTTCGCCAAGTACGAGAAGAAGGTCTTCCCTA
ACGGCGACATCGAGCACAAGTTTATCGGGGCGCACGAGGACGACCGCAAG
ACCAAGGAGTTGCAGAACCAAGGCATGAAGATCAATTTGTCCTTGACGGA
GATGTCTCAGTTCTTCATGAAGATGGCGGAAGCGGTCAAGAAGAAGAAAC
TCAAGCCGGGAGCGTCCATTCCCGGGTGCAACTCCTACTTCCTGTGCAAG
TTTCTTAAGGACACCATGCTGCAGGCCAGGACGTACCTGTTCTGCGCCAT
CCGACCGGAGGTGAAGTATCACCCCTACACATTCTCGACGTGTAACTTCG
CCAAGAACGCCTCGGTGGTGAAGCTCCAGCCCAAGAAGGCCGTCGCCGCC
AGCTCCCCCGCTGAGCGCAAGCTCATGGAGGAGCTCGAGCAGATGAAGAT
GATGATGGACGCCATGAAGGCGGAGAACGAGAAGCTGGCGGCCGCCGGCG
GGGGCGGGGAAGGAGATTCCAAGCTTCAGGAAATGCTCGCGGCGAAGCAG
GCGGAGCTGATGAACGTGCTCGCGTCCCGTGAGGGGCAAGAAGGGGAGGG
CGGGGGA
back to top