mRNA_P-littoralis_Contig196.82.1 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig196.82.1 vs. uniprot
Match: A0A6H5JV48_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JV48_9PHAE) HSP 1 Score: 511 bits (1316), Expect = 7.340e-168 Identity = 298/595 (50.08%), Postives = 378/595 (63.53%), Query Frame = 1
Query: 541 MRGDLPCEEPLPKLWSISLAPEGDIVGRGP--CLEDFILLESLQPGESF-FWRVKERGRDDSDTYVLCETRFVLPEKFAVPHLGRLRELMLREARLLDSLSHECIIPLERGWLEQRTSLEQPHICACAVCRSSPLKKLRGV------ASEDVYDTSATGKES--------TAADVMKEECLCLRQPHSWGA----TATATKDSRVCCGGCGRK--GNPVRFSVESGYGLQSEDDAVAFLLRSWVPLTVRDVEADDGEYDAAEQDKGGEMAGSNKNIRESGSRSGSQYGGVDHLRWGGDGTTDWKGNAEPKSTANAATLKTTISA----TEKQLDMTLLDPIAATEGCCCLCARGGRDRGDDGIGNRIAFLCEERIVCLASYMLLPDWLPLSVWFETEFEPRTSAVDEEDRAATTGMVTAAHDWALVWSHLLSMFVQVVRGVEHLHGHGVVHNNISPSSVWVATDGRCCVGNLSKVAPPGNRRSPSRTTEHKARHHHFASPELRQGCRVGAKSDMYSLGVLVLEFWRNYCLSRGLDNKACLTGGDGLLERMKSG-ALPVQPKEGGGLLDAVLVQSMLAEDPLDRPDCFEVVDSLRG 2241
MR DLP EEPLP LWS+SL P GD + GP LE ++ LQ G+ W+V++R + +VLCETRFVL E+ AVP LGRLRELM+REARLLD+LSH+ ++PLE+GWLE+R LEQ H+CA RS ++ G A++D + A+ + EEC LRQPHS GA T +A + S VCCG C R+ G P ++ Y + E++A AFLL S VPLT+ D++ +DG G M+ S K+I ++ S + Q+GG++ LRWGGDGTT WKG AEPK +A+ T T ++ T + M+L AA+ G C C G RG G I ER +CL SY+LLPDWLPLSVWF+TEFEP+T+A + +D AAT VTA HDWALVW HL+SMF V+RGVEH+H G+VHNNI P S+WVA DGRCCVGNLS+V PPG R+ HHH+ASPE R+G V + SD+Y+LGVL+L+FWR+Y LSRGL + CLTG GL+ER+KSG P+EG LLD VLV SMLAEDP DRPDCFE+ D L G
Sbjct: 1 MREDLPYEEPLPALWSLSLGPGGDTIDEGPHPVLEFAVVQPLLQLGDDHALWQVEDRS---GERHVLCETRFVLSERLAVPQLGRLRELMIREARLLDTLSHDYVVPLEQGWLEERAGLEQFHVCA----RSMRKSQVEGANYTSVSAAQDPIGIERVAHNTRQHRCWGDAASTAVLEECS-LRQPHSMGAAMAKTGSAAQGSTVCCG-CFRREAGFPPYYAKRDKYS-RDEENAAAFLLHSRVPLTLDDIDCEDGGM--------GGMSHSIKSIDDA-STAPPQHGGLEQLRWGGDGTTGWKGTAEPKPSADKTTSCTGCTSSPLPTGQPRPMSLNSAAAASGGYYCGCC-GSETRGTGHGGREIVRRQRERTLCLTSYLLLPDWLPLSVWFDTEFEPQTAAPEGQDGAATARAVTAPHDWALVWRHLMSMFEGVLRGVEHVHTKGLVHNNIHPCSLWVAADGRCCVGNLSQVTPPGCRKGAPE-------HHHYASPERRRGDVVDSHSDVYALGVLMLDFWRHYILSRGL-GEVCLTGEGGLVERVKSGEGRAPHPEEGADLLDCVLVGSMLAEDPFDRPDCFEIEDRLGG 567
BLAST of mRNA_P-littoralis_Contig196.82.1 vs. uniprot
Match: D7G871_ECTSI (PK_Tyr_Ser-Thr domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G871_ECTSI) HSP 1 Score: 339 bits (870), Expect = 6.750e-104 Identity = 217/500 (43.40%), Postives = 276/500 (55.20%), Query Frame = 1
Query: 799 MLREARLLDSLSHECIIPLERGWLEQRTSLEQPHICACAVCRSSPLKKLRGVASEDVYDTSATGKESTAADVMKEECL------------CLRQPHSWGA----TATATKDSRVCCGGCGRK--GNPVRFSVESGYGLQSEDDAVAFLLRSWVPLTVRDVEADDGEYDAAEQDKGGEMAGSNKNIRESGSRSGSQYGGVDHLRWGGDGTTDWKGNAEPKSTANAATLKTTISATEKQLDMTLLDPIAATEGCCCLCARGGRDRGDDGIGNRIAFLCEERIVCLASYMLLPDWLPLSVWFETEFEPRTSAVDEEDRAATTGMVTAAHDWALVWSHLLSMFVQVVRGVEHLHGHGVVHNNISPSSVWVATDGRCCVGNLSKVAPPGNRRSPSRTTEHKARHHHFASPELRQGCRVGAKSDMYSLGVLVLEFWRNYCLSRGLDNKACLTGGDGLLERMKSGALPV-QPKEGGGLLDAVLVQSMLAEDPLDRPDCFEVVDSLRG 2241
M+REARLLD+LSH+ ++PLE+GWLE+R LEQ H+ ++ R S ++ + D A G E A + CL LRQPHS A TA+A + S CCG C R G P ++ Y E+ A AFLL S VPLT+ D++ +DG GEM+ SNK+I ++ S + Q+GG++ LRWGGDGTT WKG AEPK + + T T C +S + P+S+ +A + +D A TT VTA HDWALVW HL+SMF V+RGVEHLH G+VHNNI P S+WVA DGRCCVGNLS+V PPG R+ HHHFASPE R+G V + SD+Y+LGVL+LEFWR+Y LSRGL ++ CLTG GL+ER+KSG P+EG GLLD LV SMLAEDP +RPDCFE+ D L G
Sbjct: 1 MIREARLLDTLSHDYVVPLEQGWLEERAGLEQFHVHTRSM-RKSQVEGANYASVSAAQD--AIGIERVAHSTRQHRCLGNAATTAVLDECSLRQPHSRDAAIATTASAAQGSMACCG-CFRTEAGFPPYYAKRDRYS-GDEEHAAAFLLHSRVPLTLDDIDCEDGGM--------GEMSHSNKSIDDA-STAPPQHGGLEQLRWGGDGTTGWKGTAEPKPSTDETTSCTG---------------------------------------------------CTSSPLPTAQPRPISL------NSAAAASEGQDGATTTRAVTAPHDWALVWRHLMSMFKGVLRGVEHLHTKGLVHNNIHPCSLWVAADGRCCVGNLSQVTPPGCRKGAPE-------HHHFASPERRRGDVVDSHSDVYALGVLMLEFWRHYILSRGL-SEVCLTGEGGLVERVKSGEEKTPHPEEGAGLLDCTLVGSMLAEDPFERPDCFEIEDRLGG 421
BLAST of mRNA_P-littoralis_Contig196.82.1 vs. uniprot
Match: G4Z620_PHYSP (Protein kinase domain-containing protein n=1 Tax=Phytophthora sojae (strain P6497) TaxID=1094619 RepID=G4Z620_PHYSP) HSP 1 Score: 63.9 bits (154), Expect = 1.510e-7 Identity = 49/172 (28.49%), Postives = 78/172 (45.35%), Query Frame = 1
Query: 1735 VWSHLLSMFVQVVRGVEHLHGHGVVHNNISPSSVWVATDGRCCVGNLSKVAPPGNRRSPSRTTEHKARHHHFASPELRQGCRVGAKSDMYSLGVLVLEF------WRNYCLSRGLDNKACLTGGDGLLERMKSGALPVQPKEGGGL-LDAVLVQSMLAEDPLDRPDCFEVVD 2229
VWS + Q G+E+LH G+VH ++ S++ + ++G + N ++ A G SR + + +PE+ G + SD+YSLG+ +LE W+ C R ++ +KS +P PK G + LVQ M A DP +R VVD
Sbjct: 75 VWS----LLHQAALGLEYLHERGIVHGDLRCSNILIGSEGLSKLANFTRSAKVGQTAISSRVGSMR-----WQAPEISDGKTLSFASDVYSLGMCILEAVARAMPWKYRCADRYVN----------YFRALKSSTIPGGPKNSGSAHTNWELVQQMSAFDPEERLKISTVVD 227
BLAST of mRNA_P-littoralis_Contig196.82.1 vs. uniprot
Match: A0A0A9MZE4_ARUDO (eIF-2alpha kinase GCN2 n=2 Tax=Arundo donax TaxID=35708 RepID=A0A0A9MZE4_ARUDO) HSP 1 Score: 61.6 bits (148), Expect = 3.990e-7 Identity = 42/163 (25.77%), Postives = 76/163 (46.63%), Query Frame = 1
Query: 1756 MFVQVVRGVEHLHGHGVVHNNISPSSVWVATDGRCCVGNLSKVA-PPGNRRS----PSRTTEHKARHHHFASPELRQGCRVGAKSDMYSLGVLVLEFWRNYCLSRGLDNKACLTGGDGLLERMKSGALPVQPKEGGGLLDAVLVQSMLAEDPLDRPDCFEVVD 2229
+F++V RG++H+H G+VH ++ P++++ DG + + P + S P+R T +A+PEL G K D+YSLGV+ L+ ++++ +D R EG D L + M ++DP RP F++++
Sbjct: 27 IFLEVTRGLKHIHDAGIVHRDLKPTNIFFGPDGGVRIADFGHSCYQPDSATSFNGTPNRGTAF------YAAPELAAGLNTSNKVDIYSLGVIYLQLFQSFNTVSEMD---------ATFRRYHKDEGSSVEWEG----DLALFRQMTSKDPSQRPSAFDILE 170
BLAST of mRNA_P-littoralis_Contig196.82.1 vs. uniprot
Match: A0A1I7MKM0_9MICC (Serine/threonine protein kinase n=1 Tax=Micrococcus terreus TaxID=574650 RepID=A0A1I7MKM0_9MICC) HSP 1 Score: 64.7 bits (156), Expect = 5.910e-7 Identity = 60/244 (24.59%), Postives = 97/244 (39.75%), Query Frame = 1
Query: 1747 LLSMFVQVVRGVEHLHGHGVVHNNISPSSVWVATDGRCCVGNLSKVAPPGNRRSPSRTTEHKARHHHFASPELRQGCRVGAKSDMYSLGVLVLEFWRNYCLSRGLDNKACLTGGDGLLERMKSGALPVQPKEGGGLLDAVLVQSMLAEDPLDRPDCFEVVDSLRGI*LLLVDTVGNIEVLKGCKRRQQREGPPSHQCGNACISRFIVGNAMLRKHT----TAVCENKSGARVLTLALDKDPGIG 2466
+++ V + + ++ LHGHGVVH ++SP +V + DGR +G+L G P T F +PE R R G +D+YSL + W LTG ++ ++ P+ ++ L+++ L+ DP DRP + + T +++ E P A S G A R+ TAV +GA + T+ D PG G
Sbjct: 127 VVTTLVPIAQALDALHGHGVVHGDVSPGNVLYSVDGRPSLGDLGCARLLGGAARPGGTPG-------FQAPETRLDTRTGPAADVYSLAAVG---WY------------ALTGRAPVITHARAPLSLTLPEISSEVV--ALLEAGLSMDPQDRPTAAQFATACYDW-----ATPEPVDLFGAAHPSVAMELPTRRPASTASGSSRWRGQARSRRRALVAVTAVAAMSTGAMIWTMQQDSGPGAG 341
BLAST of mRNA_P-littoralis_Contig196.82.1 vs. uniprot
Match: A0A8J7QPE7_9BACT (Non-specific serine/threonine protein kinase n=2 Tax=Acanthopleuribacter pedis TaxID=442870 RepID=A0A8J7QPE7_9BACT) HSP 1 Score: 64.7 bits (156), Expect = 9.800e-7 Identity = 62/212 (29.25%), Postives = 98/212 (46.23%), Query Frame = 1
Query: 1636 WFETEFEPRTSAVDEEDRAATTGMVTAAHDWALVWSHLLSMFVQVVRGVEHLHGHGVVHNNISPSSVWVATDGRCCVGNLSKVAPPGNRRSP----SRTTEHKARHHHFASPELRQGCRVGAKSDMYSLGVLVLEFW-----RNYCLSRGLDNKACLTGGDGLLERMKSGALPVQPKEGGGLLD--AVLVQSMLAEDPLDRPDCFEVVDSLR 2238
WF E+ P T+ DR A T + LL++F++VV V H G++H +I PS++ V DG + + P +P + T E +ASPE ++G R SD+Y+LG+L+L+ +N+ ++ L A L G + + G LP P L + A L++ MLA +P DR + + SLR
Sbjct: 125 WFIMEYIPGTTI----DRWAQERQPTV--------TQLLALFIKVVNAVGFAHERGIIHRDIKPSNLMVTPDGEPKLLDFGIALPAQPDVTPDIAGAMTPE-------YASPEQQKGNRPSRSSDIYALGLLLLQLLTGRRPKNWTITP-LTLIATLRGPETAERLSEKGTLPASPAPTTRLPEVLAYLLRRMLAPNPADR---YSDIASLR 313
BLAST of mRNA_P-littoralis_Contig196.82.1 vs. uniprot
Match: A0A4R8VVC2_9MICO (Non-specific serine/threonine protein kinase n=2 Tax=unclassified Cryobacterium TaxID=2649013 RepID=A0A4R8VVC2_9MICO) HSP 1 Score: 63.2 bits (152), Expect = 1.570e-6 Identity = 50/164 (30.49%), Postives = 77/164 (46.95%), Query Frame = 1
Query: 1768 VVRGVEHLHGHGVVHNNISPSSVWVAT-----DGRCCVGNLSKVAPPGNRR--SPSRTTEHKARHHHFASPELRQGCRVGAKSDMYSLGVLVLEFWRNYCLSRGLDNKACLTGGDGLLERMKSGALPVQPKEGGGLLDAVLVQSMLAEDPLDRPDCFEVVDSLR 2238
+ G+E++HG G+VH +I P+++ +A R + + P + R S TT A + SPE +G VG SD+YSLG+++LE + G +A L ++ +P L+ +MLA DP DRPD EVV +LR
Sbjct: 123 LAEGLEYIHGRGIVHRDIKPANILLAQYSSRFRARAKLTDFGIALSPASTRLTSEGMTTGTAA----YLSPEQARGEEVGPASDIYSLGLVLLECFTREVAFDGQPVQAALA------RLLRDPVIPASVSPAW----RDLLSTMLARDPADRPDIGEVVLALR 272
BLAST of mRNA_P-littoralis_Contig196.82.1 vs. uniprot
Match: G0MN76_CAEBE (Protein kinase domain-containing protein n=1 Tax=Caenorhabditis brenneri TaxID=135651 RepID=G0MN76_CAEBE) HSP 1 Score: 62.8 bits (151), Expect = 2.360e-6 Identity = 44/157 (28.03%), Postives = 79/157 (50.32%), Query Frame = 1
Query: 1762 VQVVRGVEHLHGHGVVHNNISPSSVWVATDGRCCVGNLSKVAPPGNRRSPSRTTEHKARHHHFASPELRQGCRVGAKSDMYSLGVLVLEFWRNYCLSRGLDNKACLTGGDGLLERMKSGALPVQPKEGGGLLDAVLVQSMLAEDPLDRPDCFEVVDS 2232
V ++R V HLHGHG++H++I P ++++ D RC +G+ N + E +R + +PEL + SDM+SLGV + E ++ L TGG R++ G +P + + + + ++++ DP DRP E+++S
Sbjct: 203 VDLLRAVRHLHGHGMIHDDIKPDNIFLTWDLRCKLGDFGLAVDLTNPVHVKNSDEGDSR---YMAPELL-AVKPSKASDMFSLGVSIFESRKDVELPE--------TGGT--WHRIRRGEIPKEFFKDVCVELIKVFMALMSHDPKDRPTAQELLES 345
BLAST of mRNA_P-littoralis_Contig196.82.1 vs. uniprot
Match: UPI001E257627 (eukaryotic translation initiation factor 2-alpha kinase 1 isoform X5 n=1 Tax=Macaca fascicularis TaxID=9541 RepID=UPI001E257627) HSP 1 Score: 62.8 bits (151), Expect = 2.610e-6 Identity = 55/186 (29.57%), Postives = 84/186 (45.16%), Query Frame = 1
Query: 1756 MFVQVVRGVEHLHGHGVVHNNISPSSVW---------VATDGRCCVGNLSKVAPPGNRRSPSRTTEHKARHHH--FASPELRQGCRVGAKSDMYSLGVLVLEFWRNYCLSRGLDNKACLTG-GDGLLERMKSGALPVQPKEGGGLLDAVLVQSMLAEDPLDRPDCFEVVDSLRGI*LLLVDTVGNI 2277
+F ++V GV ++H G+VH ++ P +++ + G C L K A NR RT H +R +ASPE +G AKSDMYSLGV++LE ++ + ++ LTG G L S PVQ K +Q + + RP +++ S L T GN+
Sbjct: 362 IFQELVEGVFYIHNMGIVHRDLKPRNIFLHGPDQQVKIGDFGLACTDILQKNADWTNRNG-KRTPTHTSRVGTCLYASPEQLEGSEYDAKSDMYSLGVILLELFQPF--GTEMERAEVLTGLRTGQLPESLSKRCPVQAK---------YIQHLTRRNSSQRPSAVQLLQSE------LFQTSGNV 529
BLAST of mRNA_P-littoralis_Contig196.82.1 vs. uniprot
Match: UPI0004CCD5CF (eukaryotic translation initiation factor 2-alpha kinase 1 n=1 Tax=Microplitis demolitor TaxID=69319 RepID=UPI0004CCD5CF) HSP 1 Score: 62.8 bits (151), Expect = 2.690e-6 Identity = 45/170 (26.47%), Postives = 88/170 (51.76%), Query Frame = 1
Query: 1741 SHLLSMFVQVVRGVEHLHGHGVVHNNISPSSVWVATDG--RCCVGN--LSKVAPPGNRRSPSRTTEHKARHHHFASPELRQGCRVGAKSDMYSLGVLVLEFWRNYCLSRGLDNKACLTGGDGLLERMKSGALPVQPKEGGGLLDAVLVQSMLAEDPLDRPDCFEVVDSLR 2238
S + +F+Q+++G+E++H HG++H++I P +++++T +G+ L+ + N + TE +A+PE G KSD+YSLG++++E LDN L+ +K G +P ++ +++Q +LA DP +RP E++ L+
Sbjct: 404 STITGIFMQILKGLEYIHSHGIIHHDIKPCNIFISTSKLPHIQIGDFGLACLVKKENGHTVPFGTEM------YAAPEQLSGS-CDPKSDLYSLGIILMELLYPTRTFMELDNT---------LKLLKLGKIPDTLEKRYQKYGEIIIQ-LLAPDPKERPSSSELLQELK 556 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig196.82.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig196.82.1 >prot_P-littoralis_Contig196.82.1 ID=prot_P-littoralis_Contig196.82.1|Name=mRNA_P-littoralis_Contig196.82.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=569bp MRGDLPCEEPLPKLWSISLAPEGDIVGRGPCLEDFILLESLQPGESFFWRback to top mRNA from alignment at P-littoralis_Contig196:375892..380569+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig196.82.1 ID=mRNA_P-littoralis_Contig196.82.1|Name=mRNA_P-littoralis_Contig196.82.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=4678bp|location=Sequence derived from alignment at P-littoralis_Contig196:375892..380569+ (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig196:375892..380569+ >mRNA_P-littoralis_Contig196.82.1 ID=mRNA_P-littoralis_Contig196.82.1|Name=mRNA_P-littoralis_Contig196.82.1|organism=Pylaiella littoralis U1_48|type=CDS|length=1707bp|location=Sequence derived from alignment at P-littoralis_Contig196:375892..380569+ (Pylaiella littoralis U1_48)back to top |