prot_P-littoralis_Contig196.64.1 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_P-littoralis_Contig196.64.1
Unique Name	prot_P-littoralis_Contig196.64.1
Type	polypeptide
Organism	Pylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length	609

Homology

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BLAST of mRNA_P-littoralis_Contig196.64.1 vs. uniprot
Match: A0A6H5JTB3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JTB3_9PHAE)

HSP 1 Score: 291 bits (746), Expect = 5.200e-86
Identity = 338/667 (50.67%), Postives = 377/667 (56.52%), Query Frame = 0

Query:    1 MGAVMSVNELTALSVAQVADLISNSSLAEYRQACIDFGIDGDMLTRLPLDQLADALGRAGVDDEQHLVFLLAEIENIRSPKIDPGKLDRKLLRELLDRSDSFDWDKGSDASEWSGVSLDSEDRILGLNVAHRHLTGELPAALGDISNLEYLHATSNVF--------------------------------------------------------IXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNVQPRILSALAPSLVFLDLSHNAFDGQLPLAALSPHSAGDTASSSRGLDSASTPD-RHPTRRRRQSEAAMGLVS-SPLSYLNLSHNKFTGRISEEVGGLTSLDTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDGDNGGGGLGTFHLMETLRLDANTFEGSVPAVLGNLTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRLEENPSLRGPIPEPLASRSGCNVRADELVLEDTEATMLGSRLDEWFLMPRKA 609
            MG  MS+ EL ALSV ++ADL       E+RQA IDFGIDG MLT LPLDQL DAL RAGV+D+QHLV+LL EIENIR PKIDP KLDR+ LR +L+RSDS D ++ S  SEWSGVS+DS+DRI+ LNV +RHL+GELPAAL +ISNLEYLHATSN+F                                                        I                       XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX                                           XXXXXXXXX                           XXXXXXXXXXXXXXXXXXXX        + P ILS L+ SLV+L+L HNAF+G LP++ LS HSAG      RG  S S  D +    RR++SE+A  +VS SPLSYLNL HNKFTG + EE+G LTSL  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX+GD+GGG LG    +E LRLD NTF G VPA LGNL                                                      RLEENPSLRGPIP+ LAS   CNVRAD+ VLEDTEA MLGS+LDEWFLMPRKA
Sbjct:    1 MGVAMSLEELGALSVVELADLAP----PEHRQASIDFGIDGHMLTSLPLDQLQDALARAGVEDKQHLVYLLEEIENIRRPKIDPSKLDRENLRAILERSDSGDHEELSGRSEWSGVSVDSDDRIIALNVTNRHLSGELPAALFEISNLEYLHATSNLFAAKGAKLLAIGLSFESQSLHHPPTFCLRHIPCLLFSCPFLGGIVWISLYTILPIGAIPDTIGDLKRLVSLKLDHNSLTGRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGANKARRWISSPELASLHFLVELRLRENRLAGKISPMLVNMQSXXXXXXXXXALQGHIPESLGEMTNLRELWLGRRENQXXXXXXXXXXXXXXXXXXXXSRNKALWKIHPHILSTLSSSLVYLNLGHNAFEGDLPVSPLSSHSAGGRVR--RGSRSGSQSDGQGRNSRRKRSESAAAVVSASPLSYLNLCHNKFTGHVPEEIGSLTSLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEGDDGGG-LGRLSSLEILRLDGNTFHGIVPAALGNLARLEVLHLQLDRLWALAVRDNNLSGRVPESLGCLTGLRSL--------------RLEENPSLRGPIPDQLASGVNCNVRADQPVLEDTEAAMLGSKLDEWFLMPRKA 646

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BLAST of mRNA_P-littoralis_Contig196.64.1 vs. uniprot
Match: D7FPI3_ECTSI (Hypothetical leucine rich repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FPI3_ECTSI)

HSP 1 Score: 213 bits (543), Expect = 2.710e-58
Identity = 414/535 (77.38%), Postives = 448/535 (83.74%), Query Frame = 0

Query:   77 IRSPKIDPGKLDRKLLRELLDRSDSFDWDKGSDASEWSGVSLDSEDRILGLNVAHRHLTGELPAALGDISNLEYLHATSNVFIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNVQPRILSALAPSLVFLDLSHNAFDGQLPLAALSPHSAGDTASSSRGLDSASTPD-RHPTRRRRQSEAAMGLVS-SPLSYLNLSHNKFTGRISEEVGGLTSLDTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDGDNGGGGLGTFHLMETLRLDANTFEGSVPAVLGNLTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRLEENPSLRGPIPEPLASRSGCNVRADELVLEDTEATMLGSRLDEWFLMPRKA 609
            IR P+IDP KLDR+ LR +L+RSDS D ++ S  SEWSGVS+DS+DRI+ LNV +R L+GELPAAL +ISNLEYLHA      XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX    XXXXXXXXXXXXXXXXXXXXXXXXXXXXX             + P +LSAL+ SLV+L+L HNAF+G LP++ LSPHSAG      RG  S S  + +  + RRR+SE+A G+VS SPLSYLNL HNKFTGR+SEE+G LTS   XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX    +GD+GGG LG    +ETLRLD NTF G VPA      XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRLEENPSLRGPIP+ LAS   CNVRAD+ VL+DTEATMLGSRLDEWFLMPRKA
Sbjct:    2 IRCPRIDPSKLDRENLRAILERSDSNDREELSGRSEWSGVSVDSDDRIIVLNVTNRTLSGELPAALFEISNLEYLHAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXESLDXXXXXXXXXXXXXXXXXXXXXXXXXXXXX------------KIHPHVLSALSSSLVYLNLGHNAFEGDLPVSPLSPHSAGGRVR--RGSTSGSPSEGQGRSSRRRRSESAAGVVSASPLSYLNLCHNKFTGRVSEEIGSLTSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSGILEGDDGGG-LGRLSSLETLRLDGNTFHGIVPAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRLEENPSLRGPIPDQLASGVNCNVRADQPVLDDTEATMLGSRLDEWFLMPRKA 521

The following BLAST results are available for this feature:

BLAST of mRNA_P-littoralis_Contig196.64.1 vs. uniprot

BLAST of mRNA_P-littoralis_Contig196.64.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2


Match Name	E-value	Identity	Description
A0A6H5JTB3_9PHAE	5.200e-86	50.67	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
D7FPI3_ECTSI	2.710e-58	77.38	Hypothetical leucine rich repeat protein n=1 Tax=E...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PRINTS	PR00019	LEURICHRPT	coord: 316..329 score: 55.09 coord: 425..438 score: 57.25
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 363..395
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 365..380
None	No IPR available	PANTHER	PTHR27000:SF14	F12K21.25	coord: 406..466
None	No IPR available	PANTHER	PTHR27000:SF14	F12K21.25	coord: 295..365
None	No IPR available	PANTHER	PTHR27000:SF14	F12K21.25	coord: 479..572 coord: 178..358
None	No IPR available	PANTHER	PTHR27000	LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE FAMILY PROTEIN-RELATED	coord: 126..308
None	No IPR available	PANTHER	PTHR27000	LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE FAMILY PROTEIN-RELATED	coord: 479..572
None	No IPR available	PANTHER	PTHR27000	LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE FAMILY PROTEIN-RELATED	coord: 406..466 coord: 295..365
None	No IPR available	PANTHER	PTHR27000:SF14	F12K21.25	coord: 126..308
None	No IPR available	PANTHER	PTHR27000	LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE FAMILY PROTEIN-RELATED	coord: 178..358
None	No IPR available	SUPERFAMILY	52058	L domain-like	coord: 404..573
None	No IPR available	SUPERFAMILY	52058	L domain-like	coord: 114..358
IPR003591	Leucine-rich repeat, typical subtype	SMART	SM00369	LRR_typ_2	coord: 313..337 e-value: 45.0 score: 7.9 coord: 169..193 e-value: 75.0 score: 6.1 coord: 265..289 e-value: 30.0 score: 9.3 coord: 217..241 e-value: 210.0 score: 2.4 coord: 425..449 e-value: 5.2 score: 15.6 coord: 502..526 e-value: 52.0 score: 7.4
IPR032675	Leucine-rich repeat domain superfamily	GENE3D	3.80.10.10	Ribonuclease Inhibitor	coord: 392..600 e-value: 8.4E-46 score: 158.4 coord: 195..381 e-value: 2.0E-49 score: 170.3
IPR032675	Leucine-rich repeat domain superfamily	GENE3D	3.80.10.10	Ribonuclease Inhibitor	coord: 92..194 e-value: 1.7E-21 score: 78.3
IPR001611	Leucine-rich repeat	PFAM	PF13855	LRR_8	coord: 404..460 e-value: 1.0E-6 score: 28.4 coord: 292..351 e-value: 2.5E-6 score: 27.1 coord: 146..206 e-value: 7.7E-8 score: 32.0
IPR013761	Sterile alpha motif/pointed domain superfamily	GENE3D	1.10.150.50		coord: 4..90 e-value: 2.5E-5 score: 26.4
IPR013761	Sterile alpha motif/pointed domain superfamily	SUPERFAMILY	47769	SAM/Pointed domain	coord: 14..80

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
P-littoralis_Contig196	contig	P-littoralis_Contig196:245416..250565 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
Pylaiella littoralis U1_48 OGS1.0	2022-07-08

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_P-littoralis_Contig196.64.1	mRNA_P-littoralis_Contig196.64.1	Pylaiella littoralis U1_48	mRNA	P-littoralis_Contig196 245416..250648 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_P-littoralis_Contig196.64.1 ID=prot_P-littoralis_Contig196.64.1|Name=mRNA_P-littoralis_Contig196.64.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=609bp
MGAVMSVNELTALSVAQVADLISNSSLAEYRQACIDFGIDGDMLTRLPLD
QLADALGRAGVDDEQHLVFLLAEIENIRSPKIDPGKLDRKLLRELLDRSD
SFDWDKGSDASEWSGVSLDSEDRILGLNVAHRHLTGELPAALGDISNLEY
LHATSNVFIGAIPEAIGGLKRLTSLKLDHNSLSGRLPSSLTRLASLTALD
LAWNRLTGTIPMKLGTMTTLRSLNLGMNKLNGAIPRELASLHLLLELRVR
ENRLSGKIPPMLGNLRSLQALDLTSNALQGHIPESLGGTTDLRELWLGGN
ELVGRIPETLSKLEDLQSLDLSRNKLTGNVQPRILSALAPSLVFLDLSHN
AFDGQLPLAALSPHSAGDTASSSRGLDSASTPDRHPTRRRRQSEAAMGLV
SSPLSYLNLSHNKFTGRISEEVGGLTSLDTLDLSHNKLEGAVPADIGNCV
SLRVLSFSRCGLSGRLDGDNGGGGLGTFHLMETLRLDANTFEGSVPAVLG
NLTRLEVLQLQCNCFSGHLPSTLGQLDRLWALTVRDNNISGRVPDSLGRL
TGLRSLRLEENPSLRGPIPEPLASRSGCNVRADELVLEDTEATMLGSRLD
EWFLMPRKA

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR003591	Leu-rich_rpt_typical-subtyp
IPR032675	LRR_dom_sf
IPR001611	Leu-rich_rpt
IPR013761	SAM/pointed_sf