prot_P-littoralis_Contig196.25.1 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig196.25.1
Unique Nameprot_P-littoralis_Contig196.25.1
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length196
Homology
BLAST of mRNA_P-littoralis_Contig196.25.1 vs. uniprot
Match: D7FPJ4_ECTSI (Vacuolar sorting receptor, putative (ISS) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FPJ4_ECTSI)

HSP 1 Score: 165 bits (418), Expect = 1.130e-49
Identity = 86/106 (81.13%), Postives = 92/106 (86.79%), Query Frame = 0
Query:   90 MAASVVLFERGEVPVVEKVLKAQAAGAAGVIVVDDGGCSGGDGPFDCGRLGGVRDGGFAKRDGAHAWSGVRIPAVLVSARDGERLRGMMRLQKVSVEGLGEQLVER 195
            MAA VVLFERGEVPVVEK+LKAQ AGA GVIVVD+GGC   DG  DCGRLGG RDGGFAKRDG HAWSGV+IPAV+VSA DGER RGMM LQK+ VEGLGEQLV+R
Sbjct:    1 MAACVVLFERGEVPVVEKILKAQTAGAVGVIVVDNGGCD--DGLVDCGRLGGARDGGFAKRDGVHAWSGVKIPAVMVSAADGERFRGMMLLQKIVVEGLGEQLVQR 104          
BLAST of mRNA_P-littoralis_Contig196.25.1 vs. uniprot
Match: A0A835Z4S0_9STRA (PA domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z4S0_9STRA)

HSP 1 Score: 155 bits (393), Expect = 1.300e-44
Identity = 81/167 (48.50%), Postives = 114/167 (68.26%), Query Frame = 0
Query:   27 RADAAFPVLHLHFCLGCPFPGAEGSLVLALAPYHGIREFKVSGGLVYAVPNKGNADLLLNGDDMAASVVLFERGEVPVVEKVLKAQAAGAAGVIVVDDGGCSGGDGPFDCGRLGGVRDGGFAKRDGAHAWSGVRIPAVLVSARDGERLRGMMRLQKVSVEGLGEQLV 193
            +A    P+ ++ FCL CP P  EGS V AL   HG R F  +G ++YAVPN G+A+LL N D++A  + L +RG +P++EKVLK QAAGA G ++VD+G CS  +    CGR GGV +GGFA RD  + WS V+IPA+LVS ++G R++ +M L+ + + G G+QLV
Sbjct:   34 QASGDSPLQYVEFCLDCPDPHLEGSHVPALRAAHGQRAFNATGDIIYAVPNDGSAELL-NPDEVAGHIALLDRGTIPLIEKVLKVQAAGAVGALLVDNGECS--EDFMRCGRTGGVPEGGFAWRDQPYDWSKVKIPALLVSEKEGSRVKALMSLRSIFITGHGDQLV 197          
BLAST of mRNA_P-littoralis_Contig196.25.1 vs. uniprot
Match: A0A482SJ43_9ARCH (PA domain-containing protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482SJ43_9ARCH)

HSP 1 Score: 115 bits (289), Expect = 8.700e-29
Identity = 62/162 (38.27%), Postives = 96/162 (59.26%), Query Frame = 0
Query:   29 DAAFPVLHLHFCLGCPFPGAEGSLVLALAPYHGIREFKVSGGLVYAVPNKGNADLLLNGDDMAASVVLFERGEVPVVEKVLKAQAAGAAGVIVVDDGGCSGGDGPFDCG-RLGGVRDGGFAKRDGAHAWSGVRIPAVLVSARDGERLRGMMRLQKVSVEGLG 189
            DA   +  + +CL CP P +EGS++ +L   +G+ E+ V+G LVY VPN      L N   ++  +   +RGE+ +++KVLK Q A A GV++ DDG C   +    CG R G +++GGFA  D   +W  V IP V+V++ + +RLR  M ++ V + GLG
Sbjct:   34 DADGALKWITYCLKCPDPRSEGSILPSLNAKYGVDEYSVTGELVYCVPNYAEGPFLANDHQLSDRIAFVDRGEISLLDKVLKIQEANALGVVIADDGSCY--EDFHYCGPRAGSLQEGGFAAYDNEQSWLAVEIPVVMVTSTNADRLRDAMGIKSVYIPGLG 193          
BLAST of mRNA_P-littoralis_Contig196.25.1 vs. uniprot
Match: A0A6G0W7Z3_9STRA (PA domain-containing protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0W7Z3_9STRA)

HSP 1 Score: 95.1 bits (235), Expect = 1.240e-20
Identity = 57/152 (37.50%), Postives = 82/152 (53.95%), Query Frame = 0
Query:   37 LHFCLGCPFPGAEGSLVLALAPYHGIREFKVSGGLVYAVPNKGNADLLLNGDDMAASVVLFERGEVPVVEKVLKAQAAGAAGVIVVDDGGCSGGDGPFDCGRLGGVRDGGFAKRDGAHAWSGVRIPAVLVSARDGERLRGMMRLQKVSVEGL 188
            L FC  C    + GS V      +   ++ V G + YAVPN  N DL  N   +   +VL +RG+VP++EKV + Q AG   V++VDDG CS G   F+CG LG      F ++D +  W+ + IP VL+   DG R++  M L ++ V  L
Sbjct:   46 LTFCKKCHDVASLGSFVHTWDSRYNPSDYHVQGEIAYAVPNTANDDLF-NIHQLEGRIVLVDRGDVPILEKVERVQEAGGIAVVLVDDGECSDG---FECGSLGSRSTHNFLEQDDSFRWNHIVIPVVLILHDDGMRIKARMSLVRMDVPDL 193          
BLAST of mRNA_P-littoralis_Contig196.25.1 vs. uniprot
Match: A0A7S2WGD9_9STRA (Hypothetical protein (Fragment) n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WGD9_9STRA)

HSP 1 Score: 89.7 bits (221), Expect = 2.230e-19
Identity = 41/92 (44.57%), Postives = 59/92 (64.13%), Query Frame = 0
Query:   37 LHFCLGCPFPGAEGSLVLALAPYHGIREFKVSGGLVYAVPNKGNADLLLNGDDMAASVVLFERGEVPVVEKVLKAQAAGAAGVIVVDDGGCS 128
            L FC  CP P  EG+ VL L    G +E+ V+G + YAVPN+     LLN  +++  +   +RG++P+VEK+L AQ AGA GV++ DDG C+
Sbjct:   58 LEFCRSCPDPHLEGTQVLGLGAAQGPKEYHVTGDMAYAVPNQMQQGALLNSMELSGKIAFVDRGDIPLVEKILLAQDAGAVGVVIADDGNCA 149          
BLAST of mRNA_P-littoralis_Contig196.25.1 vs. uniprot
Match: D8LI37_ECTSI (PA domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LI37_ECTSI)

HSP 1 Score: 70.5 bits (171), Expect = 2.550e-11
Identity = 47/112 (41.96%), Postives = 60/112 (53.57%), Query Frame = 0
Query:   63 REFKVSGGLVYAVPNKGNADLLLNGDDMAASVVLFERGEVPVVEKVLKAQAAGAAGVIVVDDGGCSGGDGPFDCGRLGGVRDGGFAKRDGAHAWSGVRIPAVLVSARDGERL 174
            R FKV   +V A P    ++L  NG  +   +V+ +RG++P+V KVL AQ AGA GVIV DDG C G  G       G     G+A  D    W  VR+P VL+   D ERL
Sbjct:   78 RSFKVKSEVVVAQPADARSELE-NGRFVRNRIVVVQRGDIPIVHKVLAAQRAGALGVIVADDGRCGGSFGQLCV--YGSDPPEGWAALDMPRPWLDVRVPVVLMLREDAERL 186          
BLAST of mRNA_P-littoralis_Contig196.25.1 vs. uniprot
Match: A0A7S3UWA2_HETAK (Hypothetical protein (Fragment) n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3UWA2_HETAK)

HSP 1 Score: 54.7 bits (130), Expect = 1.760e-5
Identity = 37/73 (50.68%), Postives = 42/73 (57.53%), Query Frame = 0
Query:  100 GEVPVVEKVLKAQAAGAAGVIVVDDGGCSGGDGPFDCGRLGGVRDGGFAKRDGAHAWSGVRIPAVLVSARDGE 172
            G VP+V K L+AQAAGA GVIVVDDG C   D     G     R   +A+ D    W GVR+P VLV A D E
Sbjct:  222 GGVPLVTKALRAQAAGALGVIVVDDGRCRAFDQRCVRGADLAARGELWARGDRPGPWRGVRVPVVLVLAGDAE 294          
BLAST of mRNA_P-littoralis_Contig196.25.1 vs. uniprot
Match: A0A8J5XRT0_DIALT (Uncharacterized protein n=2 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J5XRT0_DIALT)

HSP 1 Score: 53.1 bits (126), Expect = 9.580e-5
Identity = 36/87 (41.38%), Postives = 47/87 (54.02%), Query Frame = 0
Query:   94 VVLFERGEVPVVEKVLKAQAAGAAGVIVVDDGGCSGGDGPFDCGRLGGVRDGGFAKRDGAHAWSG--VRIPAVLVSARDGERLRGMM 178
            + L +RG    V+KVL+AQAAGAAGV+V +D                   DGG  +      WSG  VRIPAV+VS  DG+ LR ++
Sbjct:  678 LALVDRGACTFVQKVLRAQAAGAAGVVVAND------------------EDGGPVRMGLPADWSGEEVRIPAVMVSRADGDALRALI 746          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig196.25.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 8
Match NameE-valueIdentityDescription
D7FPJ4_ECTSI1.130e-4981.13Vacuolar sorting receptor, putative (ISS) n=1 Tax=... [more]
A0A835Z4S0_9STRA1.300e-4448.50PA domain-containing protein n=1 Tax=Tribonema min... [more]
A0A482SJ43_9ARCH8.700e-2938.27PA domain-containing protein n=1 Tax=archaeon TaxI... [more]
A0A6G0W7Z3_9STRA1.240e-2037.50PA domain-containing protein n=1 Tax=Aphanomyces e... [more]
A0A7S2WGD9_9STRA2.230e-1944.57Hypothetical protein (Fragment) n=1 Tax=Rhizochrom... [more]
D8LI37_ECTSI2.550e-1141.96PA domain-containing protein n=1 Tax=Ectocarpus si... [more]
A0A7S3UWA2_HETAK1.760e-550.68Hypothetical protein (Fragment) n=2 Tax=Heterosigm... [more]
A0A8J5XRT0_DIALT9.580e-541.38Uncharacterized protein n=2 Tax=Diacronema lutheri... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.50.30.30coord: 55..186
e-value: 3.8E-17
score: 64.1
NoneNo IPR availableCDDcd00538PAcoord: 66..185
e-value: 1.42904E-10
score: 54.8294
NoneNo IPR availableSUPERFAMILY52025PA domaincoord: 66..178
IPR003137PA domainPFAMPF02225PAcoord: 67..174
e-value: 6.7E-12
score: 45.3

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig196contigP-littoralis_Contig196:106772..111060 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig196.25.1mRNA_P-littoralis_Contig196.25.1Pylaiella littoralis U1_48mRNAP-littoralis_Contig196 106772..111060 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig196.25.1 ID=prot_P-littoralis_Contig196.25.1|Name=mRNA_P-littoralis_Contig196.25.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=196bp
RSSSSSSSSSSRGLQGNVRAAWVGSSRADAAFPVLHLHFCLGCPFPGAEG
SLVLALAPYHGIREFKVSGGLVYAVPNKGNADLLLNGDDMAASVVLFERG
EVPVVEKVLKAQAAGAAGVIVVDDGGCSGGDGPFDCGRLGGVRDGGFAKR
DGAHAWSGVRIPAVLVSARDGERLRGMMRLQKVSVEGLGEQLVER*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR003137PA_domain