prot_P-littoralis_Contig195.85.1 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig195.85.1
Unique Nameprot_P-littoralis_Contig195.85.1
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length87
Homology
[Close]
BLAST of mRNA_P-littoralis_Contig195.85.1 vs. uniprot
Match: A0A6H5K4R3_9PHAE (PHD-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K4R3_9PHAE)

HSP 1 Score: 120 bits (302), Expect = 6.050e-30
Identity = 58/60 (96.67%), Postives = 58/60 (96.67%), Query Frame = 0 
Query:   28 KCFADLVDENGIKPIMAKIGDAVRRKEVIEMCLDVLHDGGGATIGKRDDERHLYPEKYEE 87
            K  ADLVDENGIKPIMAKIGDAVRRKEVIEMCLDVLHDGGGATIGKRDDERHLYPEKYEE
Sbjct: 1178 KFLADLVDENGIKPIMAKIGDAVRRKEVIEMCLDVLHDGGGATIGKRDDERHLYPEKYEE 1237
[Close]
BLAST of mRNA_P-littoralis_Contig195.85.1 vs. uniprot
Match: A0A6H5KG30_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KG30_9PHAE)

HSP 1 Score: 118 bits (295), Expect = 3.940e-29
Identity = 56/60 (93.33%), Postives = 58/60 (96.67%), Query Frame = 0 
Query:   28 KCFADLVDENGIKPIMAKIGDAVRRKEVIEMCLDVLHDGGGATIGKRDDERHLYPEKYEE 87
            K  ADLV+ENGIKPIMAKIGDAVRRKEVIEMCLDVLHDGGGATIGKRDDERHLYP+KYEE
Sbjct:   24 KFLADLVEENGIKPIMAKIGDAVRRKEVIEMCLDVLHDGGGATIGKRDDERHLYPDKYEE 83
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig195.85.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5K4R3_9PHAE6.050e-3096.67PHD-type domain-containing protein n=1 Tax=Ectocar... [more]
A0A6H5KG30_9PHAE3.940e-2993.33Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig195contigP-littoralis_Contig195:374976..375236 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig195.85.1mRNA_P-littoralis_Contig195.85.1Pylaiella littoralis U1_48mRNAP-littoralis_Contig195 374945..375236 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig195.85.1 ID=prot_P-littoralis_Contig195.85.1|Name=mRNA_P-littoralis_Contig195.85.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=87bp
MTVFPRSTVSDLHDGKKTSGIFPRTTLKCFADLVDENGIKPIMAKIGDAV
RRKEVIEMCLDVLHDGGGATIGKRDDERHLYPEKYEE
back to top