mRNA_P-littoralis_Contig195.55.2 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig195.55.2 vs. uniprot
Match: D7FM75_ECTSI (LRR-GTPase of the ROCO family n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FM75_ECTSI) HSP 1 Score: 535 bits (1379), Expect = 3.970e-172 Identity = 323/692 (46.68%), Postives = 411/692 (59.39%), Query Frame = 1
Query: 13 QERTTLPPLAEADFPNGGPVPPELSALLRVLNE-NPLGWKSAVGDNPWHYPPVAVVNAGASA-VLNFFTAAFAEGASLVQRPLKVILIGKATAGKTNLRQSIAKMRACPTQNVAEESTVHIDVEDVIILGENVRIFDCAGQEAYYASLQLFLTPRALYVIVVDMANAVNTVEENARNLLGELGVLRWVRALTYRVPKAAVILVGTKCDLVKDTPSQCSVDRLKGAAATVESKIRSSTSTWAAQAAQAAARKPAGSRSLDKSRSEILLEKGMSLVSFAQSTGLPRANGGKGWPCDLNEPGLLLRILRDSSETKRAVSMRLPLIWQRAIACLEECATRLRMQGGFRGIPQAEIRDEWRRRESERRKSDTQGGHGVDPDAFGGAMDGALLIRASEGGLVVYGSFVFLDVDWLAEVLKPLFSHKPLVSNSRRTLGGREIGSSVSSQRFEREGILEPAFAEELWGKEAAPHVLETLESAGLTFPHPGVKRDGLVILLRQPRQRPVHVGNKLEGFRQRKESRDGRITARCNFLGGVPPGFVERLLTRCCHLGTCDPFWRFGVLIQSVEHFSVILEYEEDEGTIHGDTLVGKLSLEVFGDCTAAEPWAAMSACLSVVVRMLSEFPGVNADANMDCQYHHSEKGGILIALSQPQEWAPLIRNGDGCRSCLDDANEESR----LRLRYMPVAGSPLDMKRF 2070
Q RTT PL+ + PVP L +LLRV+ + + W G+NPW YPP V+ S V +F A A S V+RPLKV+++GK + GKT+LRQSI +A PT+N ESTVHIDVED + G +RIFDCAGQ AY LQLFLTP+ ++++VVDM + V +E N L +LG LRWVR+L++RVP AAVILVGTKCD VKDT + + RL AA VE IRS W Q R + I E G+SLV+ GLP GWPCD+++P LL RI + R V LPL W A++ L+E A R+R Q GFRG+ + E+ W + E ++ GGH + +A A+DGA+ I A EG LVVYGSFV +DV WLA VLKPL SHK + S LGG + +R ++GILEP AEELW + H+L L SAGLTFP P K GLV+LLR + RP VG+ L+ FR S DG+I A C L G PPGF+ERLL+ CC LG+C+ FWR+GVLIQS FSVILEY ED+ DTLVGK S++ FGD A PW A+S CLSV+ +MLSEFPG++ +A ++C YH I I L Q + W IR DGCR C+ + + +R L +PV S D F
Sbjct: 297 QGRTT--PLSAKE-----PVPSALDSLLRVVEGCSQVRW----GNNPWRYPPAEVMGQSISVHVRQYFNAVLAGSVSTVRRPLKVVVVGKESVGKTSLRQSIVAGKARPTRNHGGESTVHIDVEDHELDGRPIRIFDCAGQVAYTGLLQLFLTPQVIHLLVVDMPSVVGNIENGTSNPLEDLGALRWVRSLSFRVPGAAVILVGTKCDRVKDTDGETTEARLSRAAGMVEDNIRSWIHKWTTQ------------RLHNHHAQSIAFENGVSLVNC----GLPCDELDGGWPCDVSQPSLLHRITFKDGKA-RGVDADLPLSWGCALSLLDETARRVRGQPGFRGVERTELDGLWHDKVDELKR----GGHEM--EATEHALDGAISIMAYEGSLVVYGSFVIVDVQWLATVLKPLCSHKDM-SMGEVNLGGITVRPGPRVERLVKDGILEPKLAEELW-PDTWEHLLRALSSAGLTFPRPNDKEGGLVVLLRLDKDRPDDVGDILDDFRA---SHDGQIVASCTLLQGAPPGFIERLLSTCCRLGSCNHFWRYGVLIQS-RSFSVILEYAEDD-----DTLVGKFSVDAFGDSRTAGPWLALSGCLSVLSKMLSEFPGMDVEATLECPYHSGGSRLIPIDLYQRRPWQCFIREVDGCRRCIHEGEQNARHLFSRGLVVVPVTDSGFDTAGF 943
BLAST of mRNA_P-littoralis_Contig195.55.2 vs. uniprot
Match: D7FX69_ECTSI (LRR-GTPase of the ROCO family n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FX69_ECTSI) HSP 1 Score: 434 bits (1117), Expect = 3.530e-132 Identity = 281/673 (41.75%), Postives = 374/673 (55.57%), Query Frame = 1
Query: 145 NPWHYPPVAVVNAGASAVLNFFTAAFAEGASLVQRPLKVILIGKATAGKTNLRQSIAKMRACPTQNVAEESTVHIDVEDVIILGENVRIFDCAGQEAYYASLQLFLTPRALYVIVVDMANAVNTVEENARNLLGELGVLRWVRALTYRVPKAAVILVGTKCDLVKDTPSQCSVDRLKGAAATVESKIRSSTSTWAAQAAQAAARKPAGSRSLDKSRSEILLEKGMSLVSFAQS---TGLPRANGGKGWPCDLNEPGLLLRILRDSSETKRAVSMRLPLIWQRAIACLEECAT--RLRMQGGFRGIPQAEIRDEWRRRESERRKSDTQGGHGVDPDAFGGAMDGALLIRASEGGLVVYGSFVFLDVDWLAEVLKPLFSHKPLVSNSRRTLGGREIGSSVSSQRFEREGILEPAFAEELWGKEAAPHVLETLESAGLTFPHPGVKRDGLVILLRQPRQRPVHVGNKLEGFRQRKESRDGRITARCNFLGGVPPGFVERLLTRCCHLGTCDPFWRFGVLI--QSVEH--FSVILEYEEDEGTIHGDTLVGKLSLEVFGDCTAAEPWAAMSACLSVVVRMLSEFPGVNADANMDCQYHHSEKGGILIALSQPQEWAPLIRNGDGCRSCLDDANEESRLRLRYMPVAGSPLDMKRFCSDCGKEAFPVLAAREAKERAA 2136
NPW +PP A+V G AV ++ A F G + V RPLKV++IGK T GKT+LR+SI C TQN ESTVH+DVED + G +RIFDCAGQ YY LQLFLTPRA+Y++V D A A E + NL +L + W+R LT+RVP A VILVG K D V T + D VE + R +W +A +P G + LE G+SLVS AQS P GG GWPCD + PGL R++ D + KR V+M LP ++ A+ LEE A+ R + + RGI +A++ ++W + +E G G A AM GA+LIR EGGLV YG++VFLDV+W A VL PLFSH+ S LGG + + S +R + E + EP AEELW E APH+L L+SAGLTFP P GLVILLR RP G KLE + E+ D R+T C+F G+PPGFVERLL RCCH+G PFWR+G LI E FS+ +EY E++ L+LEVFG C WAA+S LSV+++MLSEFPG+ + C H ++ G+ I + + + L+ C+ C D E+ + L + ++F + +E F A + A++ A
Sbjct: 506 NPWEHPPEAIVAGGVQAVRGYYDAMFKGGTTAVTRPLKVVIIGKETVGKTSLRRSITTGGPCMTQNGGVESTVHVDVEDHKVDGHPIRIFDCAGQVVYYGLLQLFLTPRAVYLLVWDAAKA---SEMDGLNL-EDLAIAPWLRYLTFRVPDANVILVGNKWDRVVRTRGTVADD--------VECESRRWLKSWMEKAH---GHQPHG----------LSLEDGVSLVSCAQSGLGVSAPAFGGGTGWPCDKSTPGLFHRMIYDPVDDKRTVTMHLPPSYRLALEMLEELASSSRRKAEQRTRGITRADLEEKWHAKVAE------LNGAGTPVAAPEAAMPGAILIRKWEGGLVEYGNYVFLDVEWFATVLDPLFSHRR-DSYGDIDLGGIRVTNLASLRRLDNEHVFEPQLAEELWTPELAPHLLLALKSAGLTFPLPNDPNGGLVILLRMDTTRPPEYGIKLEQVHKASEA-DLRLTVACSFSLGLPPGFVERLLARCCHMGYPFPFWRYGALIVGNGAEKGLFSLSVEYSEEDKI---------LALEVFGGCEEVHAWAALSKVLSVMIKMLSEFPGLPCELMFFCPQHKTK--GMPIRTTDGRPGSCLVEESYFCQLCQD---REAGIDLLAAALQVVEFSDEKFLDEPLREQFAENAEKVARQGCA 1131
BLAST of mRNA_P-littoralis_Contig195.55.2 vs. uniprot
Match: D7FX56_ECTSI (LRR-GTPase of the ROCO family n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FX56_ECTSI) HSP 1 Score: 421 bits (1081), Expect = 9.660e-128 Identity = 283/703 (40.26%), Postives = 380/703 (54.05%), Query Frame = 1
Query: 64 GPVPPELSALLRVLNENPLGWKSA-VGDNPWHYPPVAVVNAGASAVLNFFTAAFAEGASLVQRPLKVILIGKATAGKTNLRQSIAKMRACPTQNVAEESTVHIDVEDVIILGENVRIFDCAGQEAYYASLQLFLTPRALYVIVVDMANAVNTVEENARNLLGELGVLRWVRALTYRVPKAAVILVGTKCDLVKDTPSQCSVDRLKGAAATVESKIRSSTSTWAAQAAQAAARKPAGSRSLDKSRSEILLEKGMSLVSFAQS---TGLPRANGGKGWPCDLNEPGLLLRILRDSSETKRAVSMRLPLIWQRAIACLEECAT--RLRMQGGFRGIPQAEIRDEWRRRESERRKSDTQGGHGVDPDAFGGAMDGALLIRASEGGLVVYGSFVFLDVDWLAEVLKPLFSHKPLVSNSRRTLGGREIGSSVSSQRFEREGILEPAFAEELWGKEAAPHVLETLESAGLTFPHPGVKRDGLVILLRQPRQRPVHVGNKLEGFRQRKESRDGRITARCNFLGGVPPGFVERLLTRCCHLGTCDPFWRFGVLI--QSVEH--FSVILEYEEDEGTIHGDTLVGKLSLEVFGDCTAAEPWAAMSACLSVVVRMLSEFPGVNADANMDCQYHHSEKGGILIALSQPQEWAPLIRNGDGCRSCLDDANEESRLRLRYMPVAGSPLDMKRFCSDCGKEAFPVLAAREAKERAAAE 2142
G +P +L+ LL V + G +S + NPW +PP A+V G AV ++ A F G + V RPLKV++IGK T GKT+LR+SI C TQN ESTVH+DVED + G +RIFDCAGQ YY LQLFLTPRA+Y++V D A A E + NL +L + W+R LT+RVP A VILVG K D V T + D VE + R +W +A +P G + LE G+SLVS AQS P GG GWPCD + PGL R++ D + KR V+M LP ++ A+ LEE A+ R + + RGI +A++ ++W + +E G G A AM GA+LIR EGGLV YG++VFLDV+W A VL PLFSH+ S LGG + + S +R + E + EP AEELW E APH+L L+SAGLTFP P GLVILLR RP + E Q ++ D ++ C+F G+PPGFVERLL RCCHLG PFWR+G LI E FS+ L+Y E + L +EV G WAA+S LSV+++MLSEFPG+ + C H ++ G+ I + + L+ G C C D + L V S + F + ++ F A + A++ A++
Sbjct: 389 GTLPVDLARLLDVFD----GLRSLDLSRNPWEHPPEAIVAGGVQAVRGYYEAMFKGGTTAVTRPLKVVIIGKETVGKTSLRRSITTGGPCMTQNGGVESTVHVDVEDHKVDGHPIRIFDCAGQVVYYGLLQLFLTPRAVYLLVWDAAKA---SEMDGLNL-EDLAIAPWLRYLTFRVPNANVILVGNKWDRVVRTRGTVADD--------VECESRRWLKSWMEKAH---GHQPHG----------LSLEDGVSLVSCAQSCLGVSAPAFGGGTGWPCDKSTPGLFHRMIYDPVDDKRTVTMHLPPSYRLALEMLEELASSSRRKAEQRTRGITRADLEEKWHAKVAE------LNGAGTPVAAPEAAMPGAILIRKWEGGLVEYGNYVFLDVEWFATVLDPLFSHRR-DSYGDIDLGGIRVTNLASLRRLDNEHVFEPQLAEELWTPELAPHLLLALKSAGLTFPLPNDPNGGLVILLRMDTTRPPEYSIRREEANQARKY-DLTLSVACSFSLGLPPGFVERLLARCCHLGYPYPFWRYGALIVGNGAEKGLFSLSLDYSEHDNM---------LKVEVLGGGEEVHAWAALSKVLSVMIKMLSEFPGLPCEPIFFCPQHKTK--GMPIRTTDAPPGSGLVEKGYFCPLCQDPTAGNNLLAAALQVVEFSD---EEFFDEPLRQKFAENAEKVARKGCASQ 1040
BLAST of mRNA_P-littoralis_Contig195.55.2 vs. uniprot
Match: D7FJV1_ECTSI (LRR-GTPase of the ROCO family n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FJV1_ECTSI) HSP 1 Score: 417 bits (1073), Expect = 2.990e-127 Identity = 277/653 (42.42%), Postives = 362/653 (55.44%), Query Frame = 1
Query: 64 GPVPPELSALLRVLNENPLGWKSAVGDNPWHYPPVAVVNAGASAVLNFFTAAFAEGASLVQRPLKVILIGKATAGKTNLRQSIAKMRACPTQNVAEESTVHIDVEDVIILGENVRIFDCAGQEAYYASLQLFLTPRALYVIVVDMANAVNTVEENARNLLGELGVLRWVRALTYRVPKAAVILVGTKCDLVKDTPSQCSVDRLKGAAATVESKIRSSTSTWAAQAAQAAARKPAGSRSLDKSRSEILLEKGMSLVSFAQS-TGLPRANGGK--GWPCDLNEPGLLLRILRDSSETKRAVSMRLPLIWQRAIACLEECAT--RLRMQGGFRGIPQAEIRDEWRRRESERRKSDTQGGHGVDPDAFGGAMDGALLIRASEGGLVVYGSFVFLDVDWLAEVLKPLFSHKPLVSNSRRTLGGREIGSSVSSQRFEREGILEPAFAEELWGKEAAPHVLETLESAGLTFPHPGVKRDGLVILLRQPRQRPVHVGNKLEGFRQRKESRDGRITARCNFLGGVPPGFVERLLTRCCHLGTCDPFWRFGVLI--QSVEH--FSVILEYEEDEGTIHGDTLVGKLSLEVFGDCTAAEPWAAMSACLSVVVRMLSEFPGVNADANMDCQYHHSEKGGILIALSQPQEWAPLIRNGDGCRSCLD 1995
G +P L+ LL L ++ +V NPW PP A+V G AV +F A + G + V RPLKV+++GK T GKT+LR+SI + C T+ EESTVH+DVED + G +R+FDCAGQ YY LQLFLTPRA+Y++V D A A N L +L + W+R LT+RVP A+VILVG KCD V T R A VE + R +W A +P G I LE G+SLVS A S G + G+ GWPCD + PGL RI+ DS++ R V+MRLP ++ A+ LEE A+ R + + RGI +A + ++W+ + +E ++ T PDA AM GA+LIR EGGLV YGS+VFLDV+W A VL PLF HK S + LGG + S R + E +LEP AE+LWG APH+L L+SAGLTFP GLVILLR + P G KL+ Q + D R+ C+F G+PPGFVERLL RCCHLG PFWR+G LI + E FS+ LEY E L++EV G T WAA+S LSV ++ML EFPG+ C H + G+ I + + L+ D C+ C D
Sbjct: 317 GTLPVPLACLLDSLERI---YRLSVAQNPWESPPDAIVVGGIPAVRAYFEAIYMGGTTAVTRPLKVVIVGKETVGKTSLRRSIKTGKPCMTRGGGEESTVHVDVEDHDLDGHPIRMFDCAGQVVYYGLLQLFLTPRAVYLLVWDAAKASEMEGLN----LEDLAIAPWLRHLTFRVPDASVILVGNKCDRVVRT-------RRTAVAVDVEHESRQWLESWIEIAR---GHQPRG----------ISLEDGVSLVSCAASGVGAVAPSFGRRSGWPCDKSTPGLFHRIIYDSTDDTRVVTMRLPESYRLALEMLEELASCSRSKTEQQTRGITRAILEEKWQAKVAEMNRAGTSV---AAPDA---AMAGAILIRKWEGGLVEYGSYVFLDVEWFATVLDPLFCHKR-DSYGKIDLGGIRVMDVDSLDRLDEEHVLEPQLAEDLWGPVLAPHLLLALKSAGLTFPLSNDSNGGLVILLRMDTKPPPDYGIKLKEKDQANKF-DLRLVVECSFRLGLPPGFVERLLARCCHLGLPYPFWRYGALIVGKGAEERMFSLSLEYSEARKI---------LTVEVSGGHTEVFAWAALSKVLSVTIKMLLEFPGLPCRTTFFCPLHKTN--GMKIRTKDARPGSCLVGESDFCKLCQD 923
BLAST of mRNA_P-littoralis_Contig195.55.2 vs. uniprot
Match: A0A6H5JRW5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JRW5_9PHAE) HSP 1 Score: 396 bits (1018), Expect = 9.130e-122 Identity = 256/661 (38.73%), Postives = 346/661 (52.34%), Query Frame = 1
Query: 64 GPVPPELSALLRVLNENPLGWKSAVGDNPWHYPPVAVVNAGASAVLNFFTAAFAEGASLVQRPLKVILIGKATAGKTNLRQSIAKMRACPTQNVAEESTVHIDVEDVIIL-------GENVRIFDCAGQEAYYASLQLFLTPRALYVIVVDMANAVNTVEENARNLLGELGVLRWVRALTYRVPKAAVILVGTKCDLVKDTPSQCSVDRLKGAAATVESKIRSSTSTWAAQAAQAAARKPAGSRSLDKSRSEILLEKGMSLVSFAQSTGL---PRANGGKGWPCDLN---EPGLLLRILRDSSETKRAVSMRLPLIWQRAIACLEECATRLRMQGGFRGIPQAEIRDEWRRRESERRKSDTQGGHGVDPDAFGGAMDGALLIRASEGGLVVYGSFVFLDVDWLAEVLKPLFSHKPLVSNSRRTLGGREIGSSVSSQRFEREGILEPAFAEELWGKEAAPHVLETLESAGLTFPHPGVKRDGLVILLRQPRQRPVHVGNKLEGFRQRKESRDGRITARCNFLGGVPPGFVERLLTRCCHLGTCDPFWRFGVLIQSVE----HFSVILEYEEDEGTIHGDTLVGKLSLEVFGDCTAAEPWAAMSACLSVVVRMLSEFPGVNADANMDCQYHHSEKGGILIALSQPQEWAPLIRNGDGCRSCLD 1995
G +P L++LL + + NPW +PP A+V G AV +F A F G ++V RPLKV+++G T GKT+LR SI + C T+ +STVH+DV+D + G +RIFDCAGQ AYY LQLFLTPRA+Y++V D A E N L +L + W+R +T+RVP A V+LVG K DLV + + D VE K R + W A + ++ LE G+SLVS A S P G K WPCD N +PGL RI+ + + RAV+MRL ++ A+ LEE A+R R+ D G G A A+ GA+LIR EGGLV YG+++FLDV W A+VL PLFSHK SN LGG+ + + S +R + I EP AE+LWG E APH+L L SAGLTFP P +GLV++LR + P +E + RK D R+ +C+F G+PPGFVERLL RCCHLG PFWR+G L+ FS+ LEY E++ T L ++V G C+ WA +S LSV ++MLSEFPG+ C H +K ++ + + + L+ G+ C C D
Sbjct: 6 GTLPVALASLLDSFDRLHSVGGLDLSQNPWEHPPEAIVTGGMLAVRGYFEAIFRGGTTVVTRPLKVVIVGMETVGKTSLRCSIKAGKPCMTRGGGVDSTVHVDVQDHNLDVQDHKAGGHPIRIFDCAGQAAYYGLLQLFLTPRAVYLLVWDAEKASQMDELN----LEDLAIAPWLRQMTFRVPDANVVLVGNKWDLVAEANLHVADD--------VERKSREWLTAWIESAHR-------------HQPPQLSLEAGVSLVSCAPSGRAGWAPSFGGRKAWPCDKNKPGQPGLFRRIIYNPVDDMRAVTMRLSPVYVLALNLLEELASRSRV--------------------------DALGTAGTTAAASEAALSGAILIRKWEGGLVEYGNYIFLDVGWFADVLDPLFSHKK-DSNGIIYLGGKTVTNDDSLKRLDANHIFEPRLAEDLWGAELAPHLLSALNSAGLTFPIPNDPFEGLVVVLRMDTEPPPDYRTIVEEEQARKYY-DLRLVVQCSFRLGLPPGFVERLLARCCHLGFPHPFWRYGALVVGAGAEEGKFSLTLEYSEEDKT---------LKVQVNGRCSEVHAWATLSKVLSVTIKMLSEFPGLPCQLEFLCP-RHEDKSMRVLKANNARPGSRLVEEGNFCPVCPD 603
BLAST of mRNA_P-littoralis_Contig195.55.2 vs. uniprot
Match: A0A6H5JSC0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JSC0_9PHAE) HSP 1 Score: 338 bits (867), Expect = 1.400e-100 Identity = 248/627 (39.55%), Postives = 320/627 (51.04%), Query Frame = 1
Query: 64 GPVPPELSALLRVLNE-NPLGWKSAVGDNPWHYPPVAVVNAGASAVLNFFTAAFAEGASLVQRPLKVILIGKATAGKTNLRQSIAKMRACPTQNVAEESTVHIDVEDVIILGENVRIFDCAGQEAYYASLQLFLTPRALYVIVVDMANAVNTVEENARNLLGELGVLRWVRALTYRVPKAAVILVGTKCDLVKDTPSQCSVDRLKGAAATVESKIRSSTSTWAAQAAQAA-ARKPAGSRSLDKSRSEILLEKGMSLVSFAQS-TGL--PRANGGKGWPCDLNEPGLLLRILRDSSETKRAVSMRLPLIWQRAIACLEECAT--RLRMQGGFRGIPQAEIRDEWRRRESERRKSDTQGGHGVDPDAFGGAMDGALLIRASEGGLVVYGSFVFLDVDWLAEVLKPLFSHKPLVSNSRRTLGGREIGSSVSSQRFEREGILEPAFAEELWGKEAAPHVLETLESAGLTFPHPGVKRDGLVILLRQPRQRPVHVGNKLEGFRQRKESRDGRITARCNFLGGVPPGFVERLLTRCCHLGTCDPFWRFGVLI----QSVEHFSVILEYEEDEGTIHGDTLVGKLSLEVFGDCTAAEPWAAMSACLSVVVRMLSEFPGVNADANMDCQYHHSEK 1911
G +P L LL L LG + NPW YPP A+ G AV +F A G+ T GKT+++ R C T+ ESTVH+DVED + G +R+FDCAGQ YY LQLFLTPRA+Y++V D A A N L +LG+ W+R LT+RVP A+VILVG KCD V T R AA VE + R W + A +P G I LE G+SLVS A S G+ P G GWP D N PGL RI +S+ RAV+M LP ++ A+ LEE A+ R + + RG+ +A + D+W+ + +E + T PDA AM GA+LIR EGGLV Y S+VFLDV+W A VL PLF HK S + LGG + R + + +LEP AEE W + P+ +S G GLVILLR + G KL+ Q + D R+ C+F G+PPGFVERLL RCCHLG PFWR+G LI V FS+ LEY E+ L++EV G T WAA+S LSV ++MLSEFPG+ C H +++
Sbjct: 31 GTLPVPLVCLLDTLARVRDLG----LAHNPWEYPPEAIAAGGIPAVRRYFEAIXXXXXXXXXXXXXXXXXGEETVGKTSIKTG----RPCMTRGCGVESTVHVDVEDHEVDGHPIRVFDCAGQVVYYGLLQLFLTPRAVYMLVWDAAKASEMEGLN----LEDLGIAPWLRYLTFRVPDASVILVGNKCDHVVRT-------RRTVVAADVEHESRQ----WLESLIEIARGHQPRG----------ISLEDGVSLVSCAASGVGVVAPSFGAGSGWPFDKNTPGLYRRIAYNSASRTRAVTMHLPESYRLALKMLEELASCSRSKTEQHIRGVTRAILEDKWQTKVAEMNRVGTSVSA---PDA---AMAGAILIRKWEGGLVEYSSYVFLDVEWFATVLDPLFCHKR-DSYGKIYLGGMRVTDVDGLDRLDEDHVLEPQLAEEDWRFPSLPN-----DSNG-----------GLVILLRMDTKPSPDYGIKLKEADQANKF-DLRLVVECSFSLGLPPGFVERLLARCCHLGLPYPFWRYGALIVGKGAEVRMFSLSLEYSEERKI---------LTVEVSGGRTEVFAWAALSKVLSVTIKMLSEFPGLPCGTTFFCPLHKTKR 591
BLAST of mRNA_P-littoralis_Contig195.55.2 vs. uniprot
Match: D7FL89_ECTSI (LRR-GTPase of the ROCO family n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FL89_ECTSI) HSP 1 Score: 318 bits (816), Expect = 8.550e-90 Identity = 238/712 (33.43%), Postives = 356/712 (50.00%), Query Frame = 1
Query: 61 GGPVPPELSALLRVLNENPLGWKSAVGDNPWHYPPVAVVNAGASAVLNFFTAAFAEGASLVQRPL-KVILIGKATAGKTNLRQSIAKMRACPTQNVAEESTVHIDVEDVIILGENVRIFDCAGQEAYYASLQLFLTPRALYVIVVDMA------NAVNTVEENARNL--LGELGVLRWVRALTYRVPKAAVILVGTKCDLVKDTPSQCSVDRLKGAAATVESKIRSSTSTWAAQAAQAAARKPAGSRSLDKSRSEILLEKGMSLVSFAQSTGLPRANGGKG------------WPCDLNE-------PGLLLRILRDSSETKRAVSMRLPLIWQRAIACLE---------ECATRLRMQGG------------------FRGIPQAEIRDEWRRRESERRKSDTQGGHGVDPDAFGGAMDGALLIRASEGGLVVYGSFVFLDVDWLAEVLKPLFSHK----PL---VSNSRRTLGGREIGSSVSSQRFEREGILEPAFAEELWGKEAAPHVLETLESAGLTFPHPGVKRDGLVILLRQPRQRPVHVGNKLEGFRQRKESRDGRITARCNFLGGVPPGFVERLLTRCCHLGTCDPFWRFGVLIQ-------SVEHFSVILEYEEDEGTIHGDTLVGKLSLEVFGDCTAAEPWAAMSACLSVVVRMLSEFPGVNADANMDCQYHHSEKGGILIALSQPQEWAPLIRNGDGCRSC 1989
G +P +L ALL L++ LG V NPW PP AVV+ G AV +FT FAEG + V R + KVIL+G+ AGKT+LRQS+ R PT EESTV IDVE + + G +R++DCAGQ AY LQ+FL+PRA+ ++V D ++ ++ ++L L EL V W+R+L++R+P + V++V TKCDL + + GA +ES W+ D + + +E G++L S ST P +GG W CD ++ P LL R++ ++ R S+ LP W + L+ E A ++ + G G+ +A++ +W + + G V+PD A++GALLIR EG LV + ++VFLDV WLA++LKPL +H+ PL VS + +E S R + G+LEP A LW + +VL TL+S GLT+P +GLV+LLR +RP VG +L+ FR+ ++ + GVPPG +E++LTRCC LGT FWRFGVL+Q + + F++++EY D ++ +EV+G A PWAA+S +SV M SEFPG+ A++ C H + + I+ + + L+ +G C C
Sbjct: 188 GSSLPKQLEALLATLSQ--LGLH--VHTNPWQEPPEAVVSKGIPAVREYFTDLFAEGIAPVGRKMIKVILVGQEGAGKTSLRQSLRTGRPTPTSG-PEESTVQIDVEQMDVNGVTLRVYDCAGQVAYTGLLQMFLSPRAVSLLVCDTGAFGQRDGSLTDSDQLKKDLNKLQELRVCDWLRSLSFRIPDSDVVMVATKCDLAAGMAADAAARMAGGAGNWIES--------WS-----------------DAQMTAVRVEDGVNLTSCFAST--PNEDGGAALGTRESPEEQSTWACDWSDGMCVESQPSLLHRVMYNNKGELRGASLVLPRSWNIGLGVLDALGSGRDPVESAQQMVLASGGPKGAAEVVPAVYQRNQGVGGLTRADLSTKWNDVVA---ALEEDGVSIVNPDH---ALEGALLIREHEGSLVRHETYVFLDVTWLAQILKPLLNHRDDEDPLRGDVSLGDTGITLKEDKHIASWNRLKGHGVLEPELAGVLWPDGLSNYVLPTLDSLGLTYPLDDDPAEGLVVLLRLDEKRPEDVGKELDDFRR---DHTAVLSVKWKIFLGVPPGAIEKMLTRCCRLGTLRTFWRFGVLVQGSLGGGMAAKTFALLIEYSHD---------TCEVDMEVYGSIRTAAPWAALSYGISVFQAMCSEFPGLRWRASLKCPQHEQD---MQISRTATRRGDKLL-HGATCNLC 845
BLAST of mRNA_P-littoralis_Contig195.55.2 vs. uniprot
Match: D7FL98_ECTSI (LRR-GTPase of the ROCO family n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FL98_ECTSI) HSP 1 Score: 317 bits (812), Expect = 4.370e-89 Identity = 234/685 (34.16%), Postives = 342/685 (49.93%), Query Frame = 1
Query: 61 GGPVPPELSALLRVLNENPLGWKSAVGDNPWHYPPVAVVNAGASAVLNFFTAAFAEGASLVQRPL-KVILIGKATAGKTNLRQSIAKMRACPTQNVAEESTVHIDVEDVIILGENVRIFDCAGQEAYYASLQLFLTPRALYVIVVDMA------NAVNTVEENARNL--LGELGVLRWVRALTYRVPKAAVILVGTKCDLVKDTPSQCSVDRLKGAAATVESKIRSSTSTWAAQAAQAAARKPAGSRSLDKSRSEILLEKGMSLVSFAQSTGLPRANGGKG------------WPCDLNE-------PGLLLRILRDSSETKRAVSMRLPLIWQRAIACL----------EECATRLRMQGGFRG-----------------IPQAEIRDEWRRRESERRKSDTQGGHGVDPDAFGGAMDGALLIRASEGGLVVYGSFVFLDVDWLAEVLKPLFSHK----PL---VSNSRRTLGGREIGSSVSSQRFEREGILEPAFAEELWGKEAAPHVLETLESAGLTFPHPGVKRDGLVILLRQPRQRPVHVGNKLEGFRQRKESRDGRITARCNFLGGVPPGFVERLLTRCCHLGTCDPFWRFGVLIQ-------SVEHFSVILEYEEDEGTIHGDTLVGKLSLEVFGDCTAAEPWAAMSACLSVVVRMLSEFPGVNADANMDCQYHHSE 1908
G +P +L ALL L+ LG+ V +NPW PP AVV+ G SAV +FT FAEG + V R + KV+L+G+ AGKT+LRQS+ R PT +EESTV IDVE + + G +R++DCAGQ AY LQ+FL+PRA+ ++V D+ + ++ ++L L EL V W+R+L++R+P + V++V TKCDL + AA +E I +W+ A + +E G+SL S T P +GG W CD E P LL R++ +S R S+ LP W A+ L E + GG +G + +A++ +W + + G V PD A++GALLIR EG LV + ++VFLDV WLA++LKPL +H+ PL VS + +E S R + G+LEP+ A LW + +VL L+S GLT+P +GLV+LLR +RP VG +L+ FR+ ++ + GVPPG +E++LTRCC LGT FWRFGVL+Q + F++++EY D+ + ++V+G + A PWAA+S +SV M SEFPG+ A + C H +
Sbjct: 224 GNALPKQLEALLATLSR--LGF--LVHENPWQEPPEAVVSKGISAVQEYFTDLFAEGIAPVGRKMIKVVLVGQEGAGKTSLRQSLRTGRPTPTSG-SEESTVQIDVEQMDVNGVTLRVYDCAGQVAYTGLLQMFLSPRAVSLLVCDLGAFGQRDGTLIHSDQLKKDLSKLQELRVCDWLRSLSFRIPDSDVVVVATKCDLAAGMGTD--------AAGRIEGAIGEWLESWSGAGMNA-----------------VHVEDGVSLTSCFPPT--PNEDGGAALGKRKSPDEDSTWACDWREGVSVESQPSLLHRVMYNSKGNVRGASLVLPRSWNIALEVLDALGSGRNPVESAQQNVLASGGPKGATEVVPAVYQRNQGVGGLTRADLSTKWNEVVA---ALEGDGVSVVKPDH---ALEGALLIREHEGSLVRHETYVFLDVTWLAQILKPLLNHRDDEDPLRGDVSLGDTGITLKEDKHIASWNRLKGHGVLEPSLARVLWPDGLSNYVLPALDSLGLTYPLDDDPAEGLVVLLRLDEKRPEDVGKELDDFRR---DHTAVLSVKWKVFLGVPPGAIEKMLTRCCRLGTLRTFWRFGVLVQGSLGGGIAARTFALVVEYSHDKCEV---------DMKVYGSISTAAPWAALSFGISVFQAMCSEFPGLRWRAALKCPQHEQD 858
BLAST of mRNA_P-littoralis_Contig195.55.2 vs. uniprot
Match: A0A6H5L650_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L650_9PHAE) HSP 1 Score: 303 bits (775), Expect = 3.150e-87 Identity = 225/678 (33.19%), Postives = 323/678 (47.64%), Query Frame = 1
Query: 49 DFPNGGPVPPELSALLRVLNENPLGWKSAVGDNPWHYPPVAVVNAGASAVLNFFTAAFAEGASLVQRPLKVILIGKATAGKTNLRQSIAKMRACPTQNVAEESTVHIDVEDVIILGENVRIFDCAGQEAYYASLQLFLTPRALYVIVVDM--------ANAVNTVEENARNLLGELGVLRWVRALTYRVPKAAVILVGTKCDLVKDTPSQCSVDRLKGAAATVESKIRSSTSTWAAQAAQAAARKPAGSRSLDKSRSEILLEKGMSLVSF----AQSTGLPRANGG---KGWPCD-------LNEPGLLLRILRDSSETK-RAVSMRLPLIWQRAIACLEEC------------------ATRLRMQGG----FRGIPQAEIRDEWRRRESERRKSDTQGGHGVDPDAFGGAMDGALLIRASEGGLVVYGSFVFLDVDWLAEVLKPLFSHKPL-VSNSRRTLGGR-------EIGSSVSS-QRFEREGILEPAFAEELWGKEAAPHVLETLESAGLTFPHPGVKRDGLVILLRQPRQRPVHVGNKLEGFRQRKESRDGRITARCNFLGGVPPGFVERLLTRCCHLGTCDPFWRFGVLIQSV-------EHFSVILEYEEDEGTIHGDTLVGKLSLEVFGDCTAAEPWAAMSACLSVVVRMLSEFPGVNADANMDCQYH 1899
D +GGP+P +L LL +L G ++ NPW PP ++V G +V +F FA+ + +R +KV+L+G+ AGKT+LRQS+ +A PT EESTV DVE + + G +VR++DCAGQ AY LQ+FLTPR++ V+V + ++ ++ VEE+ R L G L V W+R+++ RVP VILV TKCDLV + +E R+ S+W + + LE+ +SL S A G R +GW CD ++ P LL R++ + R V M LP W A+ L+ + GG ++GI E+ W+ D G G+ A++GAL IR +G LV + FVFLDV WLA +LKPL +HK + + R LG + S ++S R + EG+LEP A+ +W + +VL TL S GL FP +GLV+LLR RP VG ++ F A GVPPG VE++LTRCC LG FWR+GVL+ F+V++EY + +L +VFGD + PW AMS +S V ML +FPG+ ++ C H
Sbjct: 106 DSMSGGPMPSQLCRLLDLLESREAGRHLSLNSNPWAEPPESIVAKGLKSVRGYFEDLFADHCRIKRRGVKVVLVGQEGAGKTSLRQSMKANKATPTGEWKEESTVFADVEPMKLEGSSVRVYDCAGQVAYTGLLQMFLTPRSVCVLVCNAGEFRQQLGSDNIDQVEEDCRKLEG-LRVCDWLRSISCRVPGNDVILVATKCDLVNGNVEETGQR--------IEHACRTWLSSW-----------------VRNGMDSVRLERHVSLTSCFPIGASEHGESRRGNHALKQGWACDWRDVEGDMSSPSLLYRLVNKPDQGGLRGVQMVLPRSWDVALTFLDSLEYGRHPVEMVMLKSPDSDSGATETAGGTTTVYQGITVEELSARWQG------TVDELGRRGITVTNAENALEGALSIREFDGSLVCHEKFVFLDVVWLARILKPLLNHKDQEMFDGRVNLGDTGDTRITLDDPSDIASWDRLKNEGVLEPRLADAIWPDGLSEYVLPTLASLGLIFPLENDPAEGLVVLLRLKPHRPESVGEVIDTF---CSGLTPAFRASWKVFLGVPPGAVEKVLTRCCALGGVQTFWRYGVLVHGGLGVQDERRTFAVVVEYSSTDN---------ELVAQVFGDISRPGPWMAMSYVMSAVSLMLVDFPGLRWKGSLKCPQH 739
BLAST of mRNA_P-littoralis_Contig195.55.2 vs. uniprot
Match: D7FUC9_ECTSI (LRR-GTPase of the ROCO family n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FUC9_ECTSI) HSP 1 Score: 296 bits (759), Expect = 1.890e-82 Identity = 242/759 (31.88%), Postives = 352/759 (46.38%), Query Frame = 1
Query: 61 GGPVPPELSALLRVLNENPLGWKSAVGDNPWHYPPVAVVNAGASAVLNFFTAAFAEGASLVQRPLKVILIGKATAGKTNLRQSIAKMRACPTQNVAEESTVHIDVEDVIILGENVRIFDCAGQEAYYASLQLFLTPRALYVIVVDMA--------NAVNTVEENARNLLGELGVLRWVRALTYRVPKAAVILVGTKCDLVKDTPSQCSVDRLKGAAATVESKIRSSTSTWAAQAAQAAARKPAGSRSLDKSRSEILLEKGMSLVSFAQSTGLPRANGGK---------GWPCDLNE-------PGLLLRIL-RDSSETKRAVSMRLPLIWQRAIACLE---------------------ECATRL--RMQGGFRGIPQAEIRDEWRRRESERRKSDTQGGHGVDPDAFGGAMDGALLIRASEGGLVVYGSFVFLDVDWLAEVLKPLFSHKP------LVS-----NSRRTLGGREIGSSVSSQRFEREGILEPAFAEELWGKEAAPHVLETLESAGLTFPHPGVKRDGLVILLRQPRQRPVHVGNKLEGFRQRKESRDGRITARCNFLGGVPPGFVERLLTRCCHLGTCDPFWRFGVLIQSV-------EHFSVILEYEEDEGTIHGDTLVGKLSLEVFGDCTAAEPWAAMSACLSVVVRMLSEFPGVNADANMDCQYHHSEKGGILIALSQPQEWAPLIRNGDGCRSCLDDANEESRLRLRYMPVAGSPLDMKRFCSDCGKEAFPVLAAREAKERAAA 2139
GG +P +L LL VL + G + DNPW PP ++V+ G +++ +F + E + + + +K+IL+G+ AGKT+LRQS+ A PT EESTV DVE + + G VR++DCAGQ AY LQ+FLTPR++ V+V + + V+E+ R L EL V W+R+++ RVP VILV TKCDLV G A +I +T TW A + + LE G+ L S S NG K GW CD + PGL+ R++ + R M LP W A+ LE E ATR R G ++GI +R +W+ + GV+ A++GAL IR +G LV + FVFLDV WLA +LKPL +HK LV+ ++R TL + S R + +G+LEP A +W + +VL TL S GLTFP GLV+LLR RP VG ++ F + T+ FLG VP G +E++LTRCC LG FWR GVL+ E F+V+LEY + +L+ ++FGD + PW A+S +S V ML +FPG+ + ++ C H G ++ +++ + + GC C D + + + LD D K+ F L ++ + +AA
Sbjct: 175 GGQLPSQLCRLLDVL-DRATGGILGLDDNPWAEPPASIVSKGPTSIRGYFEDLYVESSRVQRNSVKIILVGQEGAGKTSLRQSMKANAAIPTGEWKEESTVFADVEPMQLEGSFVRVYDCAGQVAYTGLLQMFLTPRSVCVLVCNAEAFGQQRGDDTGGQVKEDCRKL-EELRVCDWLRSVSRRVPNNDVILVATKCDLVG------------GNAEEFGRRIEQATRTWLASW-------------VHDGMQPVRLEPGVCLTSCCASA--VGENGEKSTGHNASERGWACDWRDDRDDMPPPGLVHRLVNKPDGSGLRGTQMVLPRSWDIALTVLEALERGRDPVEVVVEHLAEPDREDATRTAARQTGVYQGITVEALRVKWQEAVVGLAR------RGVNVTNAKNALEGALSIREFDGSLVRHEMFVFLDVVWLARILKPLLNHKDEETFDGLVNLGDTGDTRVTL--EDPLDIASWGRLKNQGVLEPRLARTMWPNGLSKYVLPTLASLGLTFPLKNDPAGGLVVLLRLNPDRPERVGKVIDTFCL--DQTPAFSTSWKIFLG-VPAGAIEKVLTRCCSLGGVQTFWRSGVLVHGGLGDEDGHEIFAVVLEYSSSDN---------ELTAQIFGDISTPAPWVALSYVISAVRLMLLDFPGLRSRGSLKCPQH----GDAMLLVNKMTQAGVKLLEPSGCPQCSPDTRGLGAAAIDLVSMVDIRLDRDVIFRDV-KQRFVELESQYSFSSSAA 879 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig195.55.2 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig195.55.2 >prot_P-littoralis_Contig195.55.2 ID=prot_P-littoralis_Contig195.55.2|Name=mRNA_P-littoralis_Contig195.55.2|organism=Pylaiella littoralis U1_48|type=polypeptide|length=833bp EHDSQERTTLPPLAEADFPNGGPVPPELSALLRVLNENPLGWKSAVGDNPback to top mRNA from alignment at P-littoralis_Contig195:255885..266290- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig195.55.2 ID=mRNA_P-littoralis_Contig195.55.2|Name=mRNA_P-littoralis_Contig195.55.2|organism=Pylaiella littoralis U1_48|type=mRNA|length=10406bp|location=Sequence derived from alignment at P-littoralis_Contig195:255885..266290- (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig195:255885..266290- >mRNA_P-littoralis_Contig195.55.2 ID=mRNA_P-littoralis_Contig195.55.2|Name=mRNA_P-littoralis_Contig195.55.2|organism=Pylaiella littoralis U1_48|type=CDS|length=2499bp|location=Sequence derived from alignment at P-littoralis_Contig195:255885..266290- (Pylaiella littoralis U1_48)back to top |