prot_P-littoralis_Contig195.46.2 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig195.46.2
Unique Nameprot_P-littoralis_Contig195.46.2
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length586
Homology
[Close]
BLAST of mRNA_P-littoralis_Contig195.46.2 vs. uniprot
Match: D8LMN7_ECTSI (C2 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LMN7_ECTSI)

HSP 1 Score: 253 bits (647), Expect = 3.960e-74
Identity = 124/176 (70.45%), Postives = 150/176 (85.23%), Query Frame = 0 
Query:  165 IFAPWLGALAIGAVAAAAAAPYSGRDRGRPGMVVWREGGQEMSATVNMLTVQVYQAQSLKKVQILGKQDPYVRAKLFFNGQKISECRGSTHTDGGRNPTWLNRSKSVFTFYVPATVTLSSLTLTLDVVNENMVADAVIGTTGSIAVDGVATGEAKWWNITTGGMLRAAIALVTGDS 340
            +FAPWLGALA+GAVAA+  +PY+  D GR GMVVWREG QEMSA VNM+TV+V QAQ+LKKVQ++GKQDPYVRAKL FNG KI ECR STHTDGGRNPTW N ++SVFTFYVPATVTL +L + LDVVN+N+VAD++IGTTGSI +   ATGE+KWWN+++GG L+A I L+T +S
Sbjct:  122 VFAPWLGALAVGAVAASVVSPYTSYDGGRNGMVVWREGQQEMSAPVNMVTVRVCQAQNLKKVQMIGKQDPYVRAKLLFNGHKIGECRSSTHTDGGRNPTWQNMARSVFTFYVPATVTLETLAVVLDVVNDNLVADSIIGTTGSIGLKTAATGESKWWNVSSGGTLQAIIELITPES 297
[Close]
BLAST of mRNA_P-littoralis_Contig195.46.2 vs. uniprot
Match: A0A6H5JZ55_9PHAE (C2 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JZ55_9PHAE)

HSP 1 Score: 254 bits (650), Expect = 1.040e-73
Identity = 125/176 (71.02%), Postives = 150/176 (85.23%), Query Frame = 0 
Query:  165 IFAPWLGALAIGAVAAAAAAPYSGRDRGRPGMVVWREGGQEMSATVNMLTVQVYQAQSLKKVQILGKQDPYVRAKLFFNGQKISECRGSTHTDGGRNPTWLNRSKSVFTFYVPATVTLSSLTLTLDVVNENMVADAVIGTTGSIAVDGVATGEAKWWNITTGGMLRAAIALVTGDS 340
            +FAPWLGALA+GAVAA+  +PY+  D GR GMVVWREG QEMSA VNM+TV+V QAQ+LKKVQ++GKQDPYVRAKL FNG KI ECR STHTDGGRNPTW N +KSVFTFYVPATVTL +L + LDVVN+N+VAD++IGTTGSI +   ATGE+KWWNI++GG ++A I L+T +S
Sbjct:  140 VFAPWLGALAVGAVAASVVSPYTSYDGGRNGMVVWREGQQEMSAPVNMVTVRVCQAQNLKKVQMIGKQDPYVRAKLLFNGHKIGECRSSTHTDGGRNPTWQNMAKSVFTFYVPATVTLDTLAVVLDVVNDNLVADSIIGTTGSIGLQTAATGESKWWNISSGGTIQAIIELITPES 315
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig195.46.2 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LMN7_ECTSI3.960e-7470.45C2 domain-containing protein n=1 Tax=Ectocarpus si... [more]
A0A6H5JZ55_9PHAE1.040e-7371.02C2 domain-containing protein n=1 Tax=Ectocarpus sp... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000008C2 domainPFAMPF00168C2coord: 213..305
e-value: 4.0E-8
score: 33.5
IPR035892C2 domain superfamilyGENE3D2.60.40.150C2 domaincoord: 203..330
e-value: 4.7E-11
score: 44.6
IPR035892C2 domain superfamilySUPERFAMILY49562C2 domain (Calcium/lipid-binding domain, CaLB)coord: 206..323
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 564..585
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 399..452
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 402..429
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 560..585
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 485..523
NoneNo IPR availablePANTHERPTHR47052CONSERVED SERINE PROLINE-RICH PROTEIN (AFU_ORTHOLOGUE AFUA_2G01790)coord: 211..569
NoneNo IPR availablePANTHERPTHR47052:SF3CONSERVED SERINE PROLINE-RICH PROTEIN (AFU_ORTHOLOGUE AFUA_2G01790)coord: 211..569

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig195contigP-littoralis_Contig195:199999..209529 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig195.46.2mRNA_P-littoralis_Contig195.46.2Pylaiella littoralis U1_48mRNAP-littoralis_Contig195 199999..210560 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig195.46.2 ID=prot_P-littoralis_Contig195.46.2|Name=mRNA_P-littoralis_Contig195.46.2|organism=Pylaiella littoralis U1_48|type=polypeptide|length=586bp
MGDGGGEGGGEGGGGGGGFGGGGGFGGGGGGGGFGGGGGGFGGGGGGFGG
GGGGFGGGGGGFGGGGGHHGGGGFGGGYHGGGGHHGGGGGFFGGGGGGGH
HHGGGGFGPHHHGGFGVGFGGLGPGYGHHPRPGGAGVFFGGPPGGFVGGG
PGHHGPGGFIGGGPIFAPWLGALAIGAVAAAAAAPYSGRDRGRPGMVVWR
EGGQEMSATVNMLTVQVYQAQSLKKVQILGKQDPYVRAKLFFNGQKISEC
RGSTHTDGGRNPTWLNRSKSVFTFYVPATVTLSSLTLTLDVVNENMVADA
VIGTTGSIAVDGVATGEAKWWNITTGGMLRAAIALVTGDSAARAAPPSNN
SYANSSSNSAVAASTAASAAPPASGSGGGGGGGYGYGYGGSYGGGGGGRV
GTTNLPSATQQQQRNIPVAHATPAATTTAYAVSDPPPPYEIHASPVAAQQ
YRPPPVAPGAAAANAAAAAAPGGYANSNQYGGGGGGGGYPRPSGMSVPEA
SPVSFPGDDPFNARGAAAAAAAGGGGAGAAGSSPYAYAAAAAPAPSATYG
AAAGVAGTGMYPSLSAQPPPSAYRQQQQQNYPQYR*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000008C2_dom
IPR035892C2_domain_sf