prot_P-littoralis_Contig195.19.2 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig195.19.2
Unique Nameprot_P-littoralis_Contig195.19.2
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length1101
Homology
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BLAST of mRNA_P-littoralis_Contig195.19.2 vs. uniprot
Match: A0A6H5LCQ5_9PHAE (AP2 protein ( ERFprotein ) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LCQ5_9PHAE)

HSP 1 Score: 238 bits (606), Expect = 1.260e-60
Identity = 200/387 (51.68%), Postives = 221/387 (57.11%), Query Frame = 0 
Query:    1 MTNFATEAEADLVIAEQEECGEGAGECRSCQSVVGPTRRPTSCRDLAPYPNCSP---LERLHLHANLSRGLDPFYRPPSPTYTGEDFDEDSLECRSCQEVPGPSPRPACRDLPPYPNVSPHERLKIHSNLSQGLQAFAGRIPGSPDRSGRVRGPSNGGAGAGRRGVSHKAGRR------QFVRGVPSDWGPGDXXXXXXXPPASSRLPRPTGAGARAPKRGAATGGRGAARGRXXXXXXXXXX-------GGVSR------RGSVRVAAENTYGSWHGNDPDPA--MMGAGGGGRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEEYDARLAARRRAILEREVVSWGRDLPPGALESLAAA 363
            MTNFATEAEAD VIAEQEECG+G GECRSCQSVVGPTRRP +CR LAPYPNCSP   +ERL  HANLSRGL+P+YR PS  Y GE   E + ECRSCQ V G  PRP CRD PPYP+VSP ER KIH NL++GL A+  R+P  PD  G+ R  S+ G                     QF R V S+WG G       X     R      AG RA K G            XXXXXXXXXX        G +       RGSVR+AAENTYGSW G D   A   +G  GG R    XXXXXXXXXXXXXXXXXXXXXXXX                                       A+LEREVVSWGR+LPPGALE+LAA+
Sbjct:  180 MTNFATEAEADRVIAEQEECGDGGGECRSCQSVVGPTRRPINCRALAPYPNCSPVGEMERLRFHANLSRGLEPYYRGPSDGYPGEGDAEGNDECRSCQGVAGSGPRPICRDFPPYPDVSPSERFKIHLNLTRGLDAYGQRLPNQPDARGQFRHTSSAGGXXXXXXXXXXXXXXXXXXXXQFGRAVASEWGSGAAGEFDSXXXXXXRW-----AGGRASKEGLXXXXXXXXXXXXXXXXXXXXXXXXXXXXSGTAXXXXXXXRGSVRMAAENTYGSWRGTDGAGAGNSVGRSGGRRERDGXXXXXXXXXXXXXXXXXXXXXXXX---------------------------------------ALLEREVVSWGRELPPGALETLAAS 522
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BLAST of mRNA_P-littoralis_Contig195.19.2 vs. uniprot
Match: D7FZ71_ECTSI (AP2/ERF domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZ71_ECTSI)

HSP 1 Score: 197 bits (500), Expect = 1.200e-48
Identity = 92/117 (78.63%), Postives = 98/117 (83.76%), Query Frame = 0 
Query:    1 MTNFATEAEADLVIAEQEECGEGAGECRSCQSVVGPTRRPTSCRDLAPYPNCSPLERLHLHANLSRGLDPFYRPPSPTYTGEDFDEDSLECRSCQEVPGPSPRPACRDLPPYPNVSP 117
            MTNFATEAEAD VIAEQEECG+G GECRSCQSVVGPTRRP +CRDLAPYPNCSP+ERL  HANLSRGL+P+YR PS  Y GE   E + ECRSCQ VPG  PRP CRD PPYPNVSP
Sbjct:  193 MTNFATEAEADRVIAEQEECGDGGGECRSCQSVVGPTRRPINCRDLAPYPNCSPMERLRFHANLSRGLEPYYRGPSDGYPGEGDAEGNDECRSCQGVPGSGPRPICRDFPPYPNVSP 309
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig195.19.2 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5LCQ5_9PHAE1.260e-6051.68AP2 protein ( ERFprotein ) n=1 Tax=Ectocarpus sp. ... [more]
D7FZ71_ECTSI1.200e-4878.63AP2/ERF domain-containing protein n=1 Tax=Ectocarp... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 963..987
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 370..694
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 72..335
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 776..797

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig195contigP-littoralis_Contig195:82440..89668 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig195.19.2mRNA_P-littoralis_Contig195.19.2Pylaiella littoralis U1_48mRNAP-littoralis_Contig195 80984..91278 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig195.19.2 ID=prot_P-littoralis_Contig195.19.2|Name=mRNA_P-littoralis_Contig195.19.2|organism=Pylaiella littoralis U1_48|type=polypeptide|length=1101bp
MTNFATEAEADLVIAEQEECGEGAGECRSCQSVVGPTRRPTSCRDLAPYP
NCSPLERLHLHANLSRGLDPFYRPPSPTYTGEDFDEDSLECRSCQEVPGP
SPRPACRDLPPYPNVSPHERLKIHSNLSQGLQAFAGRIPGSPDRSGRVRG
PSNGGAGAGRRGVSHKAGRRQFVRGVPSDWGPGDGDGDGDSPPASSRLPR
PTGAGARAPKRGAATGGRGAARGRRSSGGGGGGDGGVSRRGSVRVAAENT
YGSWHGNDPDPAMMGAGGGGRGGGARSGGRAGGRAGGRAGGRAGGRAGGR
AGGRAGGRAGGRAGDSGGGGGGSGAGEEYDARLAARRRAILEREVVSWGR
DLPPGALESLAAAGCGSIGSGGGSSGSSGQGDRMGGGRGFGDGGGSADRG
GRDGVEEWGGGGEYVDGDDGTAGGGRHEGWRGGTGGGARGGAGAGAGAGA
GGVGAGGDVGRVDRWPDASCSAGKSEDGDGDDDGHQRAPLLLGAAGDAGA
GRGQGGRRGYGQPWDGSGSSGSSSGSGRIGGGGDGGGGGGYDEFGSFNGF
GSRDPGGMWPPNRGRATGWTGGSREGGGGGGARRRNVHDDGYLFIGQGPG
GRGAIAQPNAGPFHDLRPSSTAAEFALAQPGRGSGSGSGSGDGGGGRGGQ
GPPSEPVAAAAAGFALAQQHRGSGDVGRAWGGRNGNGTGTGAGAGADTGK
GGAAGAIAVAAPSGATNLLGLLPSECPPIAAQQGGSGAGWLHKAPSSFPA
VATLTAAAEAAAAAGGARGAGVNPTSAAGGGGAGPLEAAAQNTSGSSKRR
VDEVVRSEGGAGAAAAADAGMTIQAAKRPRSFLEGAEVPPGSFPEYNRTV
LQSASTLPPSFTLSPYSCLPAGAAVTSEEAAVAAVVAAASAAAPAPVDGG
SVGVNRPPPAPLPVDSGAAAAAVAAAAAVGGPSVLYPSQGVTKPETAAPP
MFSLAATSPSPVAAPAAGGGKTAGVGGDGGGGGGGANSEWVGPGPFTPPR
PPAAAGEELNVDEAAAAIAALSRAFSPPEGATCAGGGAAAAVEMAAALPA
KAAGIVGGAGTAIVSSLDSEKIAAAAQSVSWPAKVPAGAAAATATATTGE
*
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