mRNA_P-littoralis_Contig194.128.1 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig194.128.1 vs. uniprot
Match: A0A6H5KR74_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KR74_9PHAE) HSP 1 Score: 247 bits (631), Expect = 6.040e-76 Identity = 113/212 (53.30%), Postives = 150/212 (70.75%), Query Frame = 2
Query: 524 FVVVYLLAGCNFLPAISGLPFEKMWDATLKSVRAQGVFSKPLFVEENGVWALDEIEVVKLVATMFYFKHEPAFRIAGKCPAEMLTDVDGNVESYVNAIRVIILRRRATKTASTCPGFKSMLQQVQPAGQVMGYWQDGLQQTMPSRKFDGKGWGFNPKEKWNDGERLTAENCVLWLSEYSYVGPDRKTVTIKCGCAPEKARKHRCKTCSCKTR 1159
FV++YLLAGC+FLPAISGLPF K+W LKSVRA+GVF++ LFV E+GVW +D + +KL+AT+FYF++E AF P ++L V+ +V +YV+ IRV I++ +T CP ++SM +Q V GYWQDG + MP R F+GKGWG NPK K ++ LT ENCV+W+SE+SY+GPD K VT+ CGC P KA KH C+ C CK R
Sbjct: 78 FVLIYLLAGCDFLPAISGLPFYKVWILALKSVRAEGVFNRSLFVMEDGVWTVDIEQSIKLLATIFYFRYEAAFAGVATTPGDLLRSVNDSVRNYVDLIRVAIVKLGKKRTTDICPTYRSMREQCLRMNSVDGYWQDGFKDHMPERDFNGKGWGINPKAKGSNASALTGENCVMWMSEHSYIGPDGKMVTMTCGCDPVKALKHNCRGCGCKGR 289
BLAST of mRNA_P-littoralis_Contig194.128.1 vs. uniprot
Match: A0A6H5JQD3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JQD3_9PHAE) HSP 1 Score: 232 bits (591), Expect = 6.300e-67 Identity = 109/212 (51.42%), Postives = 145/212 (68.40%), Query Frame = 2
Query: 524 FVVVYLLAGCNFLPAISGLPFEKMWDATLKSVRAQGVFSKPLFVEENGVWALDEIEVVKLVATMFYFKHEPAFRIAGKCPAEMLTDVDGNVESYVNAIRVIILRRRATKTASTCPGFKSMLQQVQPAGQVMGYWQDGLQQTMPSRKFDGKGWGFNPKEKWNDGERLTAENCVLWLSEYSYVGPDRKTVTIKCGCAPEKARKHRCKTCSCKTR 1159
FV++YLLAGC+FLPAISGLPF KMW LKSVRA+GVF+ LFV E+GVW ++ + + L+A +FYF++E AF P ++L V+ +V +YV+ IRV I++ T TCP ++SM +Q V GYWQDG + MP R F+ KGWG +PK K ++ LT EN V+W+SE+SY+GPD K VT+ CGC P KA KH C+ C CK R
Sbjct: 313 FVLIYLLAGCDFLPAISGLPFYKMWILALKSVRAEGVFNHALFVMEDGVWTVNIEQSINLLAIIFYFRYEAAFAGVATTPGDLLRSVNDSVRNYVDLIRVAIVKLGKKWTTDTCPTYRSMREQCLRMKSVDGYWQDGFKDHMPERDFNRKGWGIDPKAKGSNASALTGENSVMWMSEHSYIGPDGKMVTMTCGCDPVKAFKHNCRGCGCKGR 524
BLAST of mRNA_P-littoralis_Contig194.128.1 vs. uniprot
Match: A0A6H5JJH5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JJH5_9PHAE) HSP 1 Score: 228 bits (580), Expect = 1.410e-65 Identity = 107/213 (50.23%), Postives = 147/213 (69.01%), Query Frame = 2
Query: 524 FVVVYLLAGCNFLPAISGLPFEKMWDATLKSVRAQGVFSKPLFVEE-NGVWALDEIEVVKLVATMFYFKHEPAFRIAGKCPAEMLTDVDGNVESYVNAIRVIILRRRATKTASTCPGFKSMLQQVQPAGQVMGYWQDGLQQTMPSRKFDGKGWGFNPKEKWNDGERLTAENCVLWLSEYSYVGPDRKTVTIKCGCAPEKARKHRCKTCSCKTR 1159
F+ +L +GC++LPAISGLPF+KMW LKS+R +G+F KPLF EE +G WA+D E K +ATMF++K E AF A PA++L VDG+VE YV+ +R IL+ KT +TCP ++ +Q + + YWQ+GL++ MP+ +F +GWG +P+ K +D + L AENCVLWLSEYSY+GP+RKTVT+ CGC P+ A C C CK R
Sbjct: 293 FIQTFLESGCDYLPAISGLPFDKMWVLVLKSMRTEGLFDKPLFFEEQDGTWAMDVDECAKQLATMFFYKDEAAFGSAHLSPAQLLESVDGDVEDYVSLVRYDILQLPKKKTTATCPSSFALCKQAERGNAIFRYWQNGLREAMPTTEFAYEGWGVDPRGKGSDSDELIAENCVLWLSEYSYIGPNRKTVTLACGCNPDTAL---CNRCRCKDR 502
BLAST of mRNA_P-littoralis_Contig194.128.1 vs. uniprot
Match: A0A6H5L5L2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L5L2_9PHAE) HSP 1 Score: 228 bits (581), Expect = 6.780e-65 Identity = 105/199 (52.76%), Postives = 142/199 (71.36%), Query Frame = 2
Query: 524 FVVVYLLAGCNFLPAISGLPFEKMWDATLKSVRAQGVFSKPLFVEENGVWALDEIEVVKLVATMFYFKHEPAFRIAGKCPAEMLTDVDGNVESYVNAIRVIILRRRATKTASTCPGFKSMLQQVQPAGQVMGYWQDGLQQTMPSRKFDGKGWGFNPKEKWNDGERLTAENCVLWLSEYSYVGPDRKTVTIKCGCAPEKA 1120
F ++YLLAGC+FLPA+SGLPF KMW +LKSVRA+GVF++ LFV E+GVW +D + +KL+AT+FYF++E AF P ++L V+ +V +YV+ IRV I++ +T TCP ++SM +Q V GYWQDG + MP R F+GKGWG NPK K ++ LT ENCV+W+SE+S +GPD K VT+ CGC P KA
Sbjct: 479 FALIYLLAGCDFLPAMSGLPFYKMWILSLKSVRAEGVFNRSLFVMEDGVWTVDIEQSIKLLATIFYFRYEAAFAGVTTTPGDLLRSVNDSVRNYVDLIRVAIVKLGKKRTTDTCPTYRSMREQCLRMKFVDGYWQDGFKDHMPERDFNGKGWGINPKAKGSNASALTGENCVMWVSEHSSIGPDGKMVTMTCGCDPVKA 677
BLAST of mRNA_P-littoralis_Contig194.128.1 vs. uniprot
Match: A0A6H5KTG2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KTG2_9PHAE) HSP 1 Score: 231 bits (589), Expect = 3.120e-64 Identity = 110/213 (51.64%), Postives = 148/213 (69.48%), Query Frame = 2
Query: 524 FVVVYLLAGCNFLPAISGLPFEKMWDATLKSVRAQGVFSKPLFVEE-NGVWALDEIEVVKLVATMFYFKHEPAFRIAGKCPAEMLTDVDGNVESYVNAIRVIILRRRATKTASTCPGFKSMLQQVQPAGQVMGYWQDGLQQTMPSRKFDGKGWGFNPKEKWNDGERLTAENCVLWLSEYSYVGPDRKTVTIKCGCAPEKARKHRCKTCSCKTR 1159
FV+ +L +GC++LPAISGLPF+KMW LKSVR +G+F +PLF EE +G WA+ E KL+ATMF++K E AF A PA+++ VDG+VE YV+ IR IL+ KT +TCP F S+ +Q + + YWQ+GL+ TMP+ +F GKGW +P+ K +DG+ LT ENCVL LSEY+Y+ PDRKTVT+ CGC P+ A C C CK +
Sbjct: 666 FVLTFLESGCDYLPAISGLPFDKMWVLALKSVRTEGLFDRPLFFEEEDGTWAVHVNECAKLLATMFFYKDEAAFGTAHLTPAQLVESVDGDVEGYVDVIRYAILQLPKKKTTATCPSFFSLRKQAERGNAIFRYWQNGLRATMPATEFAGKGWSVDPRGKGSDGDELTKENCVLDLSEYAYIAPDRKTVTLACGCNPDTAL---CNRCRCKNK 875
BLAST of mRNA_P-littoralis_Contig194.128.1 vs. uniprot
Match: A0A6H5L6D9_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L6D9_9PHAE) HSP 1 Score: 231 bits (589), Expect = 7.900e-64 Identity = 110/213 (51.64%), Postives = 148/213 (69.48%), Query Frame = 2
Query: 524 FVVVYLLAGCNFLPAISGLPFEKMWDATLKSVRAQGVFSKPLFVEE-NGVWALDEIEVVKLVATMFYFKHEPAFRIAGKCPAEMLTDVDGNVESYVNAIRVIILRRRATKTASTCPGFKSMLQQVQPAGQVMGYWQDGLQQTMPSRKFDGKGWGFNPKEKWNDGERLTAENCVLWLSEYSYVGPDRKTVTIKCGCAPEKARKHRCKTCSCKTR 1159
FV+ +L +GC++LPAISGLPF+KMW LKSVR +G+F +PLF EE +G WA+ E KL+ATMF++K E AF A PA+++ VDG+VE YV+ IR IL+ KT +TCP F S+ +Q + + YWQ+GL+ TMP+ +F GKGW +P+ K +DG+ LT ENCVL LSEY+Y+ PDRKTVT+ CGC P+ A C C CK +
Sbjct: 1685 FVLTFLESGCDYLPAISGLPFDKMWVLALKSVRTEGLFDRPLFFEEEDGTWAVHVNECAKLLATMFFYKDEAAFGTAHLTPAQLVESVDGDVEGYVDVIRYAILQLPKKKTTATCPSFFSLRKQAERGNAIFRYWQNGLRATMPATEFAGKGWSVDPRGKGSDGDELTKENCVLDLSEYAYIAPDRKTVTLACGCNPDTAL---CNRCRCKNK 1894
BLAST of mRNA_P-littoralis_Contig194.128.1 vs. uniprot
Match: A0A6H5JR25_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JR25_9PHAE) HSP 1 Score: 221 bits (564), Expect = 1.280e-63 Identity = 108/213 (50.70%), Postives = 144/213 (67.61%), Query Frame = 2
Query: 524 FVVVYLLAGCNFLPAISGLPFEKMWDATLKSVRAQGVFSKPLFVEE-NGVWALDEIEVVKLVATMFYFKHEPAFRIAGKCPAEMLTDVDGNVESYVNAIRVIILRRRATKTASTCPGFKSMLQQVQPAGQVMGYWQDGLQQTMPSRKFDGKGWGFNPKEKWNDGERLTAENCVLWLSEYSYVGPDRKTVTIKCGCAPEKARKHRCKTCSCKTR 1159
FV+ +L +GC++LPAISGLPF+KMW LKSVR + +F KPLF EE +G WA+ E KLVATMF++K E AF A PA+++ VDG+VE YVN IR IL+ KT +TCP F S+ +Q + + YWQ L++TMP+ +F G+GW +P+ K +DG+ LT ENCVL LSEY+Y+ PDRKTV + CG P+ A C C CK +
Sbjct: 154 FVLTFLESGCDYLPAISGLPFDKMWVLALKSVRTEILFDKPLFFEEPDGTWAMHVDECAKLVATMFFYKDEAAFGTAHLTPAQLVESVDGDVEGYVNVIRYAILQLPKKKTTATCPSFFSLRKQAERGNAIFQYWQHDLRETMPATEFAGQGWSVDPRGKGSDGDELTKENCVLELSEYAYIAPDRKTVKLACGFNPDTAL---CTRCRCKNK 363
BLAST of mRNA_P-littoralis_Contig194.128.1 vs. uniprot
Match: A0A6H5JT24_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JT24_9PHAE) HSP 1 Score: 223 bits (568), Expect = 4.960e-63 Identity = 106/200 (53.00%), Postives = 141/200 (70.50%), Query Frame = 2
Query: 524 FVVVYLLAGCNFLPAISGLPFEKMWDATLKSVRAQGVFSKPLFVEE-NGVWALDEIEVVKLVATMFYFKHEPAFRIAGKCPAEMLTDVDGNVESYVNAIRVIILRRRATKTASTCPGFKSMLQQVQPAGQVMGYWQDGLQQTMPSRKFDGKGWGFNPKEKWNDGERLTAENCVLWLSEYSYVGPDRKTVTIKCGCAPEKA 1120
FV+ +L +GC+ LPAISGLPF+KMW LKSVR +G+F KPLF EE +G WA+D E KL+ATMF++K E AF A P ++L VDG+VE YV+ +R +IL KT +TCP ++ +Q + + Y Q+GL++TMP+ +F GKGWG + K +D + LTAENCVLWLSEYSY+GPDRKTVT+ GC P+ A
Sbjct: 412 FVLTFLESGCDCLPAISGLPFDKMWVLVLKSVRTEGLFDKPLFFEEQDGTWAVDVDECAKLLATMFFYKDEAAFGSAQLSPPQLLESVDGDVEDYVSLVRYVILHLPKKKTTATCPSSVALRKQEERGNAIFRYCQNGLRETMPTTEFAGKGWGVEIRGKGSDSDELTAENCVLWLSEYSYIGPDRKTVTLAFGCNPDTA 611
BLAST of mRNA_P-littoralis_Contig194.128.1 vs. uniprot
Match: A0A6H5L0B5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L0B5_9PHAE) HSP 1 Score: 203 bits (517), Expect = 5.700e-56 Identity = 102/179 (56.98%), Postives = 130/179 (72.63%), Query Frame = 1
Query: 7 DAILAFYGVEGDPP-SVQDANGYLVELVSGGAEAGGEGSGD-----KDLLHFRNGASVDTSVKRQRGPNIGEAELSVVHFIVWSEEYWGKTFDKWLVTSVDTDQWMIILLAMSAGKITPHGVDEVQVTVQRIVGGQTKYLLVNQAYKKICILKDGSESAWPADGWNGWNPSDDDKVRLF 525
+ I AFYGV G+P SV G E + G E G EG+G + LLHFR+G + V+RQRGP+IGEAELSV+HFIVW+++YWG++FDKW+V+SVDTD WMIILLAM+ G +TP G V VTVQR+VGG+TK+L +N+ + IC L+DGSESAWP + GW P+ DDKVRLF
Sbjct: 208 NGIAAFYGVGGEPDLSVDHPPGVHAEGI--GLEVGREGAGKALSETEPLLHFRDGTNTIEGVERQRGPDIGEAELSVIHFIVWAKKYWGESFDKWIVSSVDTDLWMIILLAMTTGWLTPRGERAVDVTVQRVVGGETKFLWMNRVFASICELQDGSESAWPPLTFGGWIPTHDDKVRLF 384
BLAST of mRNA_P-littoralis_Contig194.128.1 vs. uniprot
Match: A0A6H5KHQ7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KHQ7_9PHAE) HSP 1 Score: 197 bits (501), Expect = 6.030e-56 Identity = 94/180 (52.22%), Postives = 128/180 (71.11%), Query Frame = 2
Query: 524 FVVVYLLAGCNFLPAISGLPFEKMWDATLKSVRAQGVFSKPLFVEE-NGVWALDEIEVVKLVATMFYFKHEPAFRIAGKCPAEMLTDVDGNVESYVNAIRVIILRRRATKTASTCPGFKSMLQQVQPAGQVMGYWQDGLQQTMPSRKFDGKGWGFNPKEKWNDGERLTAENCVLWLSEYS 1060
FV+ +L +GC++LPAISGLPF+KMW LKSVR +G+F KPLF EE +G WA++ E KL+ATM ++K E AF A PA+++ VDG+VE YV+ IR ILR KT +TCP F S+ +Q + ++ YWQ GL++TMP +F GKGW +P+ K +DG++LT ENCVL LSEY+
Sbjct: 205 FVLTFLESGCDYLPAISGLPFDKMWVLALKSVRTEGLFDKPLFFEEQDGTWAVEVDECAKLLATMSFYKDEAAFGTAHLTPAQLVESVDGDVEGYVDVIRYAILRLPKKKTTATCPSFFSLRKQAERGNAIVRYWQIGLRETMPVTEFAGKGWSVDPRGKGSDGDKLTKENCVLDLSEYA 384 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig194.128.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig194.128.1 >prot_P-littoralis_Contig194.128.1 ID=prot_P-littoralis_Contig194.128.1|Name=mRNA_P-littoralis_Contig194.128.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=228bp MAGTAGTRATTTKYVSFVVVYLLAGCNFLPAISGLPFEKMWDATLKSVRAback to top mRNA from alignment at P-littoralis_Contig194:400231..401389+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig194.128.1 ID=mRNA_P-littoralis_Contig194.128.1|Name=mRNA_P-littoralis_Contig194.128.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=1159bp|location=Sequence derived from alignment at P-littoralis_Contig194:400231..401389+ (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig194:400231..401389+ >mRNA_P-littoralis_Contig194.128.1 ID=mRNA_P-littoralis_Contig194.128.1|Name=mRNA_P-littoralis_Contig194.128.1|organism=Pylaiella littoralis U1_48|type=CDS|length=684bp|location=Sequence derived from alignment at P-littoralis_Contig194:400231..401389+ (Pylaiella littoralis U1_48)back to top |