prot_P-littoralis_Contig194.104.1 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig194.104.1
Unique Nameprot_P-littoralis_Contig194.104.1
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length259
Homology
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BLAST of mRNA_P-littoralis_Contig194.104.1 vs. uniprot
Match: D8LRB3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LRB3_ECTSI)

HSP 1 Score: 234 bits (596), Expect = 2.500e-74
Identity = 127/183 (69.40%), Postives = 145/183 (79.23%), Query Frame = 0 
Query:   20 TQSLREVHERLVSFIAAHATLGKATLSLADSIVEFYSPQDAGFAPAVAFQTVAAEGISGLLCAQLQALVQTALRPLARFTAELSQMNALAKSCRQKAESEHHYAKKVDWLNSKLETERREDKRAVLQEKV-------------------ELARLVDSSHQSSYDCFNPVFASICQFQEASYSH 183
            TQSLREVHERLVSF+  H  L  +T+ LADSI++FYSP+DAGFAPAVAFQTVAAEG+SGLLCAQLQALVQT LRPLARFTAEL +M+ L+K+C++K ESEHHYAKKV+ LN KLE ERREDKRAVLQEK                    EL+RLV  SHQSS+DC +PVFASICQFQEASY +
Sbjct:   10 TQSLREVHERLVSFVQCHTQLASSTIGLADSILDFYSPEDAGFAPAVAFQTVAAEGVSGLLCAQLQALVQTTLRPLARFTAELGEMDTLSKACQRKRESEHHYAKKVNELNGKLEAERREDKRAVLQEKAARNIRKLAAARTVRKQASEELSRLVVISHQSSHDCLDPVFASICQFQEASYRY 192
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BLAST of mRNA_P-littoralis_Contig194.104.1 vs. uniprot
Match: A0A6H5J8H8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J8H8_9PHAE)

HSP 1 Score: 189 bits (481), Expect = 3.130e-51
Identity = 106/143 (74.13%), Postives = 116/143 (81.12%), Query Frame = 0 
Query:   58 QDAGFAPAVAFQTVAAEGISGLLCAQLQALVQTALRPLARFTAELSQMNALAKSCRQKAESEHHYAKKVDWLNSKLETERREDKRAVLQEKV-------------------ELARLVDSSHQSSYDCFNPVFASICQFQEASY 181
            QDAGFAPAVAFQTVAAEG+SGLLCAQLQALVQTALRPLARFTAEL +M+ L K+C++K ESEHHYAKKV+ LNSKLE ERREDKRAVLQEK                    EL+RLV SSHQSS+DCF+PVFASICQFQEASY
Sbjct:   31 QDAGFAPAVAFQTVAAEGVSGLLCAQLQALVQTALRPLARFTAELGEMDTLFKACQRKRESEHHYAKKVNELNSKLEAERREDKRAVLQEKAARNIRKLAAXXXXXXQASEELSRLVVSSHQSSHDCFDPVFASICQFQEASY 173
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BLAST of mRNA_P-littoralis_Contig194.104.1 vs. uniprot
Match: A0A6H5JB03_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JB03_9PHAE)

HSP 1 Score: 57.0 bits (136), Expect = 1.650e-7
Identity = 26/39 (66.67%), Postives = 32/39 (82.05%), Query Frame = 0 
Query:   20 TQSLREVHERLVSFIAAHATLGKATLSLADSIVEFYSPQ 58
            TQSLREVHERLVSF+  H  L  +T+ LADSI++FYSP+
Sbjct:   10 TQSLREVHERLVSFVQCHTQLASSTIGLADSILDFYSPE 48
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig194.104.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D8LRB3_ECTSI2.500e-7469.40Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5J8H8_9PHAE3.130e-5174.13Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JB03_9PHAE1.650e-766.67Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR027267AH/BAR domain superfamilyGENE3D1.20.1270.60Arfaptin homology (AH) domain/BAR domaincoord: 11..196
e-value: 5.0E-9
score: 38.1
IPR027267AH/BAR domain superfamilySUPERFAMILY103657BAR/IMD domain-likecoord: 18..153
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..21

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig194contigP-littoralis_Contig194:284954..297728 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig194.104.1mRNA_P-littoralis_Contig194.104.1Pylaiella littoralis U1_48mRNAP-littoralis_Contig194 284954..297814 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig194.104.1 ID=prot_P-littoralis_Contig194.104.1|Name=mRNA_P-littoralis_Contig194.104.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=259bp
MSPLQTDSRSSASTSAETQTQSLREVHERLVSFIAAHATLGKATLSLADS
IVEFYSPQDAGFAPAVAFQTVAAEGISGLLCAQLQALVQTALRPLARFTA
ELSQMNALAKSCRQKAESEHHYAKKVDWLNSKLETERREDKRAVLQEKVE
LARLVDSSHQSSYDCFNPVFASICQFQEASYSHGHLLSSMLLRVARASLG
TTALPMATAATVASAVPTVVPSLLLPENEGERVLKWRDDGISGGAGAAVY
GGGGGGGSG
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR027267AH/BAR_dom_sf