mRNA_P-littoralis_Contig194.73.1 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig194.73.1 vs. uniprot
Match: A0A6H5L3Z2_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L3Z2_9PHAE) HSP 1 Score: 148 bits (374), Expect = 3.810e-42 Identity = 78/133 (58.65%), Postives = 97/133 (72.93%), Query Frame = 1
Query: 1 MWSEDNGRDRTIAFYGVCSEPGEEESIETGISAEA--LSVGG--AGDCVE-EEPLLHFRNG--AAPGVQRQRGPDIGEAELSLVHFIVQAKRYWGKDFDKWLVTSVDTDEWMIILLAMSTGKSKPQGPGAVEV 378
+W+ D + +AFYGV EPG G+ AE L +GG A + + EPLLHFRNG + PGV+RQRGPDIGEAELS++HFIV AK+YWGK FDKW+V+SVDTD WMIILLAM+TG +P+G GAV+V
Sbjct: 114 VWTGDTKPNGIVAFYGVGGEPGLCADHPAGVDAEGEDLEMGGISAAEALSGTEPLLHFRNGNDSIPGVERQRGPDIGEAELSVIHFIVWAKKYWGKSFDKWIVSSVDTDLWMIILLAMTTGWLRPRGEGAVDV 246
BLAST of mRNA_P-littoralis_Contig194.73.1 vs. uniprot
Match: A0A6H5KTD3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KTD3_9PHAE) HSP 1 Score: 155 bits (392), Expect = 6.670e-42 Identity = 81/139 (58.27%), Postives = 99/139 (71.22%), Query Frame = 1
Query: 1 MWSEDNGRDRTIAFYGVCSEPGEEESIETGISAEA--LSVGGAGDCVE---EEPLLHFRNGAAP--GVQRQRGPDIGEAELSLVHFIVQAKRYWGKDFDKWLVTSVDTDEWMIILLAMSTGKSKPQGPGAVEVIVQRIV 396
+W+ D + +AFYGV EPG G+ AE L +GG G EPLLHFRNG P GV+RQRGPDIGEAELS++HFIV AKRYWGK+F KW+V+SVDTD WMIILLAM+TG +P+G GAV+V VQ++V
Sbjct: 405 VWTGDTKPNGIVAFYGVGGEPGLRADHPAGVDAEGVGLEMGGVGATEALSGTEPLLHFRNGNDPVLGVERQRGPDIGEAELSVIHFIVWAKRYWGKNFHKWIVSSVDTDLWMIILLAMTTGWLRPRGEGAVDVTVQKVV 543
BLAST of mRNA_P-littoralis_Contig194.73.1 vs. uniprot
Match: A0A6H5JAK2_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JAK2_9PHAE) HSP 1 Score: 155 bits (392), Expect = 7.000e-42 Identity = 81/139 (58.27%), Postives = 99/139 (71.22%), Query Frame = 1
Query: 1 MWSEDNGRDRTIAFYGVCSEPGEEESIETGISAEA--LSVGGAGDCVE---EEPLLHFRNGAAP--GVQRQRGPDIGEAELSLVHFIVQAKRYWGKDFDKWLVTSVDTDEWMIILLAMSTGKSKPQGPGAVEVIVQRIV 396
+W+ D + +AFYGV EPG G+ AE L +GG G EPLLHFRNG P GV+RQRGPDIGEAELS++HFIV AKRYWGK+F KW+V+SVDTD WMIILLAM+TG +P+G GAV+V VQ++V
Sbjct: 393 VWTGDTKPNGIVAFYGVGGEPGLRADHPAGVDAEGVGLEMGGVGATEALSGTEPLLHFRNGNDPILGVERQRGPDIGEAELSVIHFIVWAKRYWGKNFHKWIVSSVDTDLWMIILLAMTTGWLRPRGEGAVDVTVQKVV 531
BLAST of mRNA_P-littoralis_Contig194.73.1 vs. uniprot
Match: A0A6H5KTG2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KTG2_9PHAE) HSP 1 Score: 155 bits (392), Expect = 2.660e-41 Identity = 81/139 (58.27%), Postives = 99/139 (71.22%), Query Frame = 1
Query: 1 MWSEDNGRDRTIAFYGVCSEPGEEESIETGISAEA--LSVGGAGDCVE---EEPLLHFRNGAAP--GVQRQRGPDIGEAELSLVHFIVQAKRYWGKDFDKWLVTSVDTDEWMIILLAMSTGKSKPQGPGAVEVIVQRIV 396
+W+ D + +AFYGV EPG G+ AE L +GG G EPLLHFRNG P GV+RQRGPDIGEAELS++HFIV AKRYWGK+F KW+V+SVDTD WMIILLAM+TG +P+G GAV+V VQ++V
Sbjct: 482 VWTGDTKPNGIVAFYGVGGEPGLRADHPAGVDAEGVGLEMGGVGATEALSGTEPLLHFRNGNDPILGVERQRGPDIGEAELSVIHFIVWAKRYWGKNFHKWIVSSVDTDLWMIILLAMTTGWLRPRGEGAVDVTVQKVV 620
BLAST of mRNA_P-littoralis_Contig194.73.1 vs. uniprot
Match: A0A6H5L6D9_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L6D9_9PHAE) HSP 1 Score: 155 bits (392), Expect = 2.760e-41 Identity = 81/139 (58.27%), Postives = 99/139 (71.22%), Query Frame = 1
Query: 1 MWSEDNGRDRTIAFYGVCSEPGEEESIETGISAEA--LSVGGAGDCVE---EEPLLHFRNGAAP--GVQRQRGPDIGEAELSLVHFIVQAKRYWGKDFDKWLVTSVDTDEWMIILLAMSTGKSKPQGPGAVEVIVQRIV 396
+W+ D + +AFYGV EPG G+ AE L +GG G EPLLHFRNG P GV+RQRGPDIGEAELS++HFIV AKRYWGK+F KW+V+SVDTD WMIILLAM+TG +P+G GAV+V VQ++V
Sbjct: 1501 VWTGDTKPNGIVAFYGVGGEPGLRADHPAGVDAEGVGLEMGGVGATEALSGTEPLLHFRNGNDPILGVERQRGPDIGEAELSVIHFIVWAKRYWGKNFHKWIVSSVDTDLWMIILLAMTTGWLRPRGEGAVDVTVQKVV 1639
BLAST of mRNA_P-littoralis_Contig194.73.1 vs. uniprot
Match: A0A6H5JYE1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JYE1_9PHAE) HSP 1 Score: 154 bits (389), Expect = 4.740e-41 Identity = 79/137 (57.66%), Postives = 98/137 (71.53%), Query Frame = 1
Query: 1 MWSEDNGRDRTIAFYGVCSEPGEEESIETGISAEA-LSVGGAGDCVE---EEPLLHFRNG--AAPGVQRQRGPDIGEAELSLVHFIVQAKRYWGKDFDKWLVTSVDTDEWMIILLAMSTGKSKPQGPGAVEVIVQRI 393
+W+ D + +AFYGV EPG G+ AE L +GG G EPLLHFRNG PGV+RQ GPDIGEAELS++HFIV AK+YWGK+FDKW+V+SVDTD WMIILLAM+TG +P+G GAV+V VQ++
Sbjct: 612 VWTGDTKPNGIVAFYGVGGEPGLSADHPAGVDAEGGLEMGGVGATEALSGTEPLLHFRNGNDPTPGVERQLGPDIGEAELSVIHFIVWAKKYWGKNFDKWIVSSVDTDLWMIILLAMTTGWLRPRGEGAVDVTVQKV 748
BLAST of mRNA_P-littoralis_Contig194.73.1 vs. uniprot
Match: A0A6H5L1K3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L1K3_9PHAE) HSP 1 Score: 151 bits (382), Expect = 5.910e-40 Identity = 79/128 (61.72%), Postives = 94/128 (73.44%), Query Frame = 1
Query: 34 IAFYGVCSEPGEEESIETGISAEA--LSVGGAGDCVE---EEPLLHFRNGAAP--GVQRQRGPDIGEAELSLVHFIVQAKRYWGKDFDKWLVTSVDTDEWMIILLAMSTGKSKPQGPGAVEVIVQRIV 396
+AFYGV EPG G+ AE L +GG G EPLLHFRNG P GV+RQRGPDIGEAELS++HFIV AKRYWGK+F KW+V+SVDTD WMIILLAM+TG +P+G GAV+V VQ++V
Sbjct: 832 VAFYGVGGEPGLRADHPAGVDAEGVGLEMGGVGATEALSGTEPLLHFRNGNDPILGVERQRGPDIGEAELSVIHFIVWAKRYWGKNFHKWIVSSVDTDLWMIILLAMTTGWLRPRGEGAVDVTVQKVV 959
BLAST of mRNA_P-littoralis_Contig194.73.1 vs. uniprot
Match: A0A6H5KLM2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KLM2_9PHAE) HSP 1 Score: 137 bits (345), Expect = 1.210e-38 Identity = 67/105 (63.81%), Postives = 80/105 (76.19%), Query Frame = 1
Query: 88 GISAEALSVGGAGDCVEEEPLLHFRNG--AAPGVQRQRGPDIGEAELSLVHFIVQAKRYWGKDFDKWLVTSVDTDEWMIILLAMSTGKSKPQGPGAVEVIVQRIV 396
G+S E VG EPLLHFRNG PGV+RQRGPDIGEAELS+VHFI +AK+YWGK FDKW+V+S DTD WMIILL M+TG +P+G GAV+V VQ++V
Sbjct: 4 GVSLEMGGVGATEALSGTEPLLHFRNGNDPTPGVERQRGPDIGEAELSVVHFIARAKKYWGKSFDKWIVSSADTDLWMIILLPMTTGWLRPRGEGAVDVTVQKVV 108
BLAST of mRNA_P-littoralis_Contig194.73.1 vs. uniprot
Match: A0A6H5L0B5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L0B5_9PHAE) HSP 1 Score: 145 bits (367), Expect = 2.860e-38 Identity = 80/139 (57.55%), Postives = 97/139 (69.78%), Query Frame = 1
Query: 1 MWSEDNGRDRTIAFYGVCSEPGEEESIETGISAEA--LSVG--GAGDCVEE-EPLLHFRNGA--APGVQRQRGPDIGEAELSLVHFIVQAKRYWGKDFDKWLVTSVDTDEWMIILLAMSTGKSKPQGPGAVEVIVQRIV 396
+W+ D + AFYGV EP G+ AE L VG GAG + E EPLLHFR+G GV+RQRGPDIGEAELS++HFIV AK+YWG+ FDKW+V+SVDTD WMIILLAM+TG P+G AV+V VQR+V
Sbjct: 200 VWTGDTKPNGIAAFYGVGGEPDLSVDHPPGVHAEGIGLEVGREGAGKALSETEPLLHFRDGTNTIEGVERQRGPDIGEAELSVIHFIVWAKKYWGESFDKWIVSSVDTDLWMIILLAMTTGWLTPRGERAVDVTVQRVV 338
BLAST of mRNA_P-littoralis_Contig194.73.1 vs. uniprot
Match: D8LKS2_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LKS2_ECTSI) HSP 1 Score: 136 bits (343), Expect = 3.840e-37 Identity = 73/139 (52.52%), Postives = 94/139 (67.63%), Query Frame = 1
Query: 1 MWSEDNGRDRTIAFYGVCSEPGEEESIETGISAEALSVG----GAGDCVEE-EPLLHFRN--GAAPGVQRQRGPDIGEAELSLVHFIVQAKRYWGKDFDKWLVTSVDTDEWMIILLAMSTGKSKPQGPGAVEVIVQRIV 396
+W+ D + +AFYGV EP G+ AE + + GAG+ + E EPLL+FR+ GV+RQRGP IGEAELS++HFI AK+YWGK FDKW+V+SVDTD WMIILLAM+TG P+G AV+V V R+V
Sbjct: 93 VWTGDTKPNGIVAFYGVGGEPDLSADHPPGVDAEGIGLEMAREGAGEALPETEPLLYFRDRTDTIEGVERQRGPYIGEAELSVIHFIAWAKKYWGKSFDKWVVSSVDTDLWMIILLAMTTGWLTPRGERAVDVTVLRVV 231 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig194.73.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig194.73.1 >prot_P-littoralis_Contig194.73.1 ID=prot_P-littoralis_Contig194.73.1|Name=mRNA_P-littoralis_Contig194.73.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=132bp MWSEDNGRDRTIAFYGVCSEPGEEESIETGISAEALSVGGAGDCVEEEPLback to top mRNA from alignment at P-littoralis_Contig194:191724..192119+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig194.73.1 ID=mRNA_P-littoralis_Contig194.73.1|Name=mRNA_P-littoralis_Contig194.73.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=396bp|location=Sequence derived from alignment at P-littoralis_Contig194:191724..192119+ (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig194:191724..192119+ >mRNA_P-littoralis_Contig194.73.1 ID=mRNA_P-littoralis_Contig194.73.1|Name=mRNA_P-littoralis_Contig194.73.1|organism=Pylaiella littoralis U1_48|type=CDS|length=396bp|location=Sequence derived from alignment at P-littoralis_Contig194:191724..192119+ (Pylaiella littoralis U1_48)back to top |