mRNA_P-littoralis_Contig194.57.1 (mRNA) Pylaiella littoralis U1_48

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-littoralis_Contig194.57.1
Unique NamemRNA_P-littoralis_Contig194.57.1
TypemRNA
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Homology
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BLAST of mRNA_P-littoralis_Contig194.57.1 vs. uniprot
Match: A0A6H5L6Z5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L6Z5_9PHAE)

HSP 1 Score: 425 bits (1093), Expect = 4.900e-143
Identity = 247/400 (61.75%), Postives = 281/400 (70.25%), Query Frame = 1 
Query:  130 ASNLKCLSFMRHSIATHNEAAAAYADAMDSVYLSEAYADASLSSRGHALVQSARQSKLGLSPAPSIVLCSPLTRAIQTAIGMFGGTGIRILAVPEAREAHGRFPCDRHRDKSELELMFGDRVDFSLCNAKDTVWSPYHREQMTHLDNRVARFVEGVLRQREAAHVFVVSHGVFIESALRQLAHPFLGHSSENRVHNCDVNSFVFSVPPPAPSSSSPSTFDTPSAAGGAHRHTNVQSGSRIAAPSATMTPNASGSGGSGGGMSPMRPRVEAYLTGQDLDNACTAGMPLVAVAHINRVVRRFSGDGDGGSGVSLTEEQFSTLLACCQLGPQETRWLYRALRREGXXXXXXXXXVASGDFLLALMAFYPGXXXXXXXXXXXEAPAGSRGGMMVDLRRQYQREV 1329
            A+ L C+SFMRHSIATHNEAAAA ADAM SVYLSEAYAD+SLSSRGHALV+ ARQS LGLSPAPS+VLCSPLTRA+QTAI MFGG+GI I+AVPEAREA+GRFPCDRHRDKSELELMFGD VDFSLC  +DT WSP+HRE+M+ LD RVA FV+ +LR REA HVFVVSHGVFIE+ALRQLAH + GH  +NRVHNCDV+SFVFSV   APSS++                     G R+   +AT T                 PRVEAYLTGQ L  AC A MPL AVAH+NR +R FSGDG     VSLTE QFS LLA C++G QETRWLY AL REG         VA+GD L AL+AF+ G           E P       ++DLR +YQRE+
Sbjct:   62 AAGLTCVSFMRHSIATHNEAAAASADAMGSVYLSEAYADSSLSSRGHALVRRARQSMLGLSPAPSVVLCSPLTRAVQTAIAMFGGSGIPIVAVPEAREAYGRFPCDRHRDKSELELMFGDSVDFSLCPVQDTTWSPHHREEMSQLDRRVAGFVDDLLR-REAGHVFVVSHGVFIEAALRQLAHGYPGHIGKNRVHNCDVHSFVFSV---APSSAAXXXXXXXXXXXXXXXXXXXGLG-RVPLAAATST---------------APPRVEAYLTGQGLALACAARMPLPAVAHVNRTIRCFSGDG-----VSLTERQFSALLARCEIGAQETRWLYCALDREGGGK------VAAGDLLQALVAFHSGEEEAGGVA---EPPGTHAHHGLMDLRVRYQREM 427
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BLAST of mRNA_P-littoralis_Contig194.57.1 vs. uniprot
Match: D8LRC2_ECTSI (Catalytic, putative n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LRC2_ECTSI)

HSP 1 Score: 335 bits (859), Expect = 3.190e-109
Identity = 198/343 (57.73%), Postives = 225/343 (65.60%), Query Frame = 1 
Query:  301 LGLSPAPSIVLCSPLTRAIQTAIGMFGGTGIRILAVPEAREAHGRFPCDRHRDKSELELMFGDRVDFSLCNAKDTVWSPYHREQMTHLDNRVARFVEGVLRQREAAHVFVVSHGVFIESALRQLAHPFLGHSSENRVHNCDVNSFVFSVPPPAPSSSSPSTFDTPSAAGGAHRHTNVQSGSRIAAPSATMTPNASGSGGSGGGMSPMRPRVEAYLTGQDLDNACTAGMPLVAVAHINRVVRRFSGDGDGGSGVSLTEEQFSTLLACCQLGPQETRWLYRALRREGXXXXXXXXXVASGDFLLALMAFYPGXXXXXXXXXXXEAPAGSRGGMMVDLRRQYQREV 1329
            LGLSPAPS+VLCSPLTRA+QTAI MFGG+GI I+AVPEAREA+GRFPCDRHRD+SELELMFGD VDFSLC  +DT WSP+HRE+M+ LD RVA FV+G+LR REA HVFVVSHGVFIE+ LRQLAH + GH  +NRVHNCDV+SFVFSV   APSS                                                S   PRVEAYLTGQ L  AC A MPL AVAH+NR +RRFSGDG     +SLTE QFS LLA C++G QETRWLY AL REG         VA+GD L AL+AF+ G            A A  R G+M DLR +YQRE+
Sbjct:    2 LGLSPAPSVVLCSPLTRAVQTAIAMFGGSGIPIVAVPEAREAYGRFPCDRHRDRSELELMFGDSVDFSLCAVQDTAWSPHHREEMSQLDRRVAGFVDGLLR-REAGHVFVVSHGVFIEATLRQLAHGYPGHIGKNRVHNCDVHSFVFSV---APSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX------TSTAPPRVEAYLTGQGLALACAARMPLPAVAHVNRTIRRFSGDG-----LSLTERQFSALLARCEIGAQETRWLYCALDREGGGK------VAAGDLLQALVAFHSGGEEAGSVAEPPGAHA--RHGLM-DLRVRYQREM 320
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BLAST of mRNA_P-littoralis_Contig194.57.1 vs. uniprot
Match: A0A836CBQ0_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CBQ0_9STRA)

HSP 1 Score: 98.2 bits (243), Expect = 8.540e-19
Identity = 60/127 (47.24%), Postives = 72/127 (56.69%), Query Frame = 1 
Query:  385 TGIRILAVPEAREAHGRFPCDRHRDKSELELMFGDRVDFSLCNAKDTVWSPYHREQMTHLDNRVARFVEGVLRQREAAHVFVVSHGVFIESALRQLAHPFLGHSSENRVHNCDVNSFVFSV---PPP 756
            +GI I+AV  AREAHG  PCDR R ++ELE  FGDR D+S   A D  W    RE   HL  R  RF+  VL  RE  HV VVSHGVFIE         + G ++  RV NCD  ++ F +   PPP
Sbjct:   96 SGIPIVAVEGAREAHGVCPCDRRRPRAELETAFGDR-DYSSDVAHDPWWQRDARESTAHLQQRALRFLGEVLSLRET-HVAVVSHGVFIEMLHDYFLRDWPGCAATRRVMNCDTCTYGFVMENGPPP 220
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BLAST of mRNA_P-littoralis_Contig194.57.1 vs. uniprot
Match: A0A830H2D5_9CHLO (Uncharacterized protein n=1 Tax=Pycnococcus provasolii TaxID=41880 RepID=A0A830H2D5_9CHLO)

HSP 1 Score: 94.4 bits (233), Expect = 2.110e-18
Identity = 68/194 (35.05%), Postives = 96/194 (49.48%), Query Frame = 1 
Query:  148 LSFMRHSIATHNEAAAAYA---DAMDSVYLSEAYADASLSSRGHALVQSARQSKLGLSPAPSIVLCSPLTRAIQT---AIGMFGGTG--------IRILAVPEAREAHGRFPCDRHRDKSELELMFGDR-VDFSLCNAKD----TVWSPYHREQMTHLDNRVARFVEGVLRQR---EAAHVFVVSHGVFIESAL 663
            L  +RH +A HN AA  +    + M +VYLSEA+ D +L+SRG     +   S +    + S++ CSPLTRAIQT   AI   GG G         +++     RE  G  PCDR R + E+E ++ +  VD    N  D    T W+P  RE +  +  R   F+  V R+    E    +V SHGV +E  L
Sbjct:    3 LLLVRHGVAQHNSAAGRFETREETMQNVYLSEAFFDCALTSRGSDQAVALFPSFVAHHNSSSLIFCSPLTRAIQTCLLAITGAGGAGGETNSEEQRKVILDESLREVTGLHPCDRRRPRREIEQLWNEHAVDVDATNIPDDDTDTAWNPTKRETLESVQARARTFLRSVARRAMSTETKAAWVFSHGVLLEQML 196
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BLAST of mRNA_P-littoralis_Contig194.57.1 vs. uniprot
Match: A0A803MUX6_CHEQI (Uncharacterized protein n=3 Tax=Chenopodium quinoa TaxID=63459 RepID=A0A803MUX6_CHEQI)

HSP 1 Score: 92.0 bits (227), Expect = 3.170e-17
Identity = 84/250 (33.60%), Postives = 111/250 (44.40%), Query Frame = 1 
Query:  136 NLKCLSFMRHSIATHNEAAAAYADAMDSVYLSEAYADASLSSRGHALVQSARQ--SKLGLSPAPSIVLCSPLTRAIQTAIGMFGG----TGIRI------------------------LAVPEAREAHGRFPCDRHRDKSELELMFGDRVDFSLCNAKDTVWSPYHREQMTHLDNRVARFVEGVLRQREAAHVFVVSHGVFIE---SALRQLAHPFLGHSSENRVHNCDVNSFVFSVPPPAPSSSSPSTF 786
            + K L  +RH+   HN A      A    YLS  Y DASL+SRG   V + R+     GLS    +V+ SPLTR IQTA+G+FGG     G+ +                        LAV   RE  G  PCD+ R KSE E +F   +DFSL   +D +W    RE    L  R  +F++  L  R    + +VSH  F+    SA     H  +         NC++ S VF     A S SS + F
Sbjct:   23 HCKTLHLVRHAQGYHNVAGEKDVKA----YLSYDYLDASLTSRGWEQVDNLRKHVQGSGLSKKIDLVITSPLTRTIQTAVGVFGGGSYNDGVDVAPLMVADAGNSGRPAISSFGCPPFLAVESCREHLGVHPCDKRRTKSEYETLF-PAIDFSLIENEDILWKEDVRETDEELAERGMKFLKW-LWTRSEKEIAIVSHSGFLFHTLSAFGNDCHQVVKDEICTHFANCELRSMVFVDKSMASSDSSETNF 266
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BLAST of mRNA_P-littoralis_Contig194.57.1 vs. uniprot
Match: A0A5C7H7B2_9ROSI (Uncharacterized protein n=1 Tax=Acer yangbiense TaxID=1000413 RepID=A0A5C7H7B2_9ROSI)

HSP 1 Score: 87.0 bits (214), Expect = 9.810e-16
Identity = 69/221 (31.22%), Postives = 104/221 (47.06%), Query Frame = 1 
Query:  142 KCLSFMRHSIATHNEAAAAYADAMDSVYLSEAYADASLSSRGHALVQSARQS--KLGLSPAPSIVLCSPLTRAIQTAIGMFGGTGIR-----------------ILAVPEAREAHGRFPCDRHRDKSELELMFGDRVDFSLCNAKDTV-WSPYHREQMTHLDNRVARFVEGVLRQREAAHVFVVSHGVFIESALRQLAHPFLGHSSEN--RVHNCDVNSFV 738
            K L  +RH    HN       +  + V LS+ + DA LS  G   V + R+     GL+    +V+ SP++R +QTA+G+FG  G                   I+AV   RE  G  PCD+    SE +  F   +DF L  ++D + W    RE M  + +R  +F+E  L  R+   + VVSHG+F    L+++ H  +   S N  R  NC++ S V
Sbjct:   13 KVLHLVRHGQGIHN----VEGEKGNHVLLSDEFFDAHLSPLGRQQVDNLRKQVQSCGLAKKIDLVITSPMSRTLQTAVGVFGSEGHSMTVKEENGAKSTLNSPPIVAVELCRERMGLHPCDKRGSISEYQSNF-PAIDFKLAKSEDDILWKADTRETMKEVTDRGKKFIEW-LWTRQEKEIAVVSHGIF----LQEILHTLVNDPSMNTTRFQNCEIRSVV 223
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BLAST of mRNA_P-littoralis_Contig194.57.1 vs. uniprot
Match: UPI000B8B7B30 (phosphoglycerate mutase-like protein 1 n=1 Tax=Spinacia oleracea TaxID=3562 RepID=UPI000B8B7B30)

HSP 1 Score: 86.7 bits (213), Expect = 4.460e-15
Identity = 78/236 (33.05%), Postives = 105/236 (44.49%), Query Frame = 1 
Query:  136 NLKCLSFMRHSIATHNEAAAAYADAMDSVYLSEAYADASLSSRGHALVQSARQ--SKLGLSPAPSIVLCSPLTRAIQTAIGMFGG----TGIRI------------------------LAVPEAREAHGRFPCDRHRDKSELELMFGDRVDFSLC-NAKDTVWSPYHREQMTHLDNRVARFVEGVLRQREAAHVFVVSHGVFIE---SALRQLAHPFLGHSSENRVHNCDVNSFVF 741
            + K +  +RH+   HN A     D     YLS  Y DASL+SRG   V   R+     GLS    +V+ SPLTR IQTA+G+FGG     G+ +                        LAV   RE  G  PCD+ R K+E E +F   +DFSL  N +D +W    RE    L  R  +F+   L  R    + +VSH  F+    SA  +  H  +         NC++ S VF
Sbjct:   71 HCKTIHLVRHAQGFHNVAG----DKDVEAYLSYDYLDASLTSRGWEQVDHLRKHVQGSGLSKKIDLVITSPLTRTIQTAVGVFGGGAYTDGVDVTPLMVADAGNSGRPGISSFGCPPFLAVELCREHLGVHPCDKRRSKTEYETLF-PAIDFSLIENDEDVLWKEDLRETDEELAKRGMKFLNW-LWTRSEKEIAIVSHSGFLFHTLSAFGKDCHQVVKDEICTHFANCELRSMVF 300
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BLAST of mRNA_P-littoralis_Contig194.57.1 vs. uniprot
Match: A0A3L6Q7T5_PANMI (Phosphoglycerate mutase-like protein 1 n=9 Tax=Panicum TaxID=4539 RepID=A0A3L6Q7T5_PANMI)

HSP 1 Score: 85.9 bits (211), Expect = 4.500e-15
Identity = 71/234 (30.34%), Postives = 104/234 (44.44%), Query Frame = 1 
Query:  142 KCLSFMRHSIATHNEAAAAYADAMD-SVYLSEAYADASLSSRGHALVQSARQ--SKLGLSPAPSIVLCSPLTRAIQTAIGMFGG----TGIR------------------------ILAVPEAREAHGRFPCDRHRDKSELELMFGDRVDFSLC-NAKDTVWSPYHREQMTHLDNRVARFVEGVLRQREAAHVFVVSHGVFIESALRQLA---HPFLGHSSENRVHNCDVNSFV 738
            K +  +RH+   HN         MD S Y+   + DA ++  G   V   R+   K+GL+    +V+CSPL R +QTA+G+FGG     GI                          LAV   RE  G  PCD+ R  +E   +F   +DFSL  N +D +W P  RE +  L  R  +F++  L  RE   + +V+H   +   LR  +   HP + H       NC++ S V
Sbjct:   16 KTIHLVRHAQGVHN-----VEGEMDHSAYMKPEFFDARVTPLGWNQVDCLREHVKKIGLAEKIELVICSPLLRTMQTAVGVFGGENYTNGISGSPLMVENAADSGRPAISNLNCPPFLAVEACRERLGVHPCDKRRSVTEYRTLF-PAIDFSLIENDEDVLWVPDVRETLESLGQRGMKFIDW-LWTREEKEIAIVTHSGLLWHTLRMYSKECHPTVRHEVSKYFANCELRSLV 242
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BLAST of mRNA_P-littoralis_Contig194.57.1 vs. uniprot
Match: A0A2T7CRP6_9POAL (Uncharacterized protein n=2 Tax=Panicum hallii TaxID=206008 RepID=A0A2T7CRP6_9POAL)

HSP 1 Score: 85.5 bits (210), Expect = 4.780e-15
Identity = 69/234 (29.49%), Postives = 102/234 (43.59%), Query Frame = 1 
Query:  142 KCLSFMRHSIATHNEAAAAYADAMDSVYLSEAYADASLSSRGHALVQSARQ--SKLGLSPAPSIVLCSPLTRAIQTAIGMFGGTGIR----------------------------ILAVPEAREA-HGRFPCDRHRDKSELELMFGDRVDFSL-CNAKDTVWSPYHREQMTHLDNRVARFVEGVLRQREAAHVFVVSHGVFIESALRQLA---HPFLGHSSENRVHNCDVNSFV 738
            K +  +RH+   HN       +   S Y S A+ DA ++  G   V   R+     GL+    +V+CSPL R +QTA+G+FGG                                 LAV   RE   G  PCD+ R  +E   MF   +DFSL  N +D +W P  +E    +  R  +F++  L  RE   + +V+H V ++  LR  +   HP + H    R  NC++ S V
Sbjct:   33 KTIHLVRHAQGVHN----VEGEKDRSAYTSPAFFDAPITPLGWRQVDYLREHVKNCGLATKIELVICSPLLRTMQTAVGVFGGESYTGGVGAPPLMVENTGHSERLAISSLNCPPFLAVETCRERLQGGHPCDKRRSITEYRTMF-PAIDFSLETNDEDVLWVPDVKEAHKSVAARGMKFMDW-LWTREEKEIAIVTHSVLLQDTLRMYSKECHPTIRHEMSKRFKNCELRSMV 260
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BLAST of mRNA_P-littoralis_Contig194.57.1 vs. uniprot
Match: K3Y964_SETIT (Uncharacterized protein n=5 Tax=Setaria TaxID=4554 RepID=K3Y964_SETIT)

HSP 1 Score: 85.1 bits (209), Expect = 8.270e-15
Identity = 70/233 (30.04%), Postives = 100/233 (42.92%), Query Frame = 1 
Query:  142 KCLSFMRHSIATHNEAAAAYADAMDSVYLSEAYADASLSSRGHALVQSARQ--SKLGLSPAPSIVLCSPLTRAIQTAIGMFGG----TGIR------------------------ILAVPEAREAHGRFPCDRHRDKSELELMFGDRVDFSLC-NAKDTVWSPYHREQMTHLDNRVARFVEGVLRQREAAHVFVVSHGVFIESALRQLA---HPFLGHSSENRVHNCDVNSFV 738
            K +  +RH+   HN       D   S Y+   + DA ++  G   V   R+   K GL     +V+CSPL R +QTA+G+FGG     GI                          LAV   RE  G  PCD+ R  +E   +F   +DFSL  N +D +W P  RE    L  R  +F++  L  RE   + +V+H   +   LR  +   HP + H       NC++ S V
Sbjct:   16 KTIHLLRHAQGVHN----VEGDKDHSAYMKPEFFDARITPLGWNQVDRLREHVKKCGLPEKIELVICSPLLRTMQTAVGVFGGENHTNGISAPPLMVENAADSGRPAISSFNCPPFLAVEACRERLGVHPCDKRRSITEYRTLF-PAIDFSLAKNDEDVLWVPDVRETFESLAERGMKFIDW-LWTREEKEIAIVTHSGLLCHTLRMYSKECHPTVRHEVSKYFSNCELRSLV 242
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig194.57.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5L6Z5_9PHAE4.900e-14361.75Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LRC2_ECTSI3.190e-10957.73Catalytic, putative n=1 Tax=Ectocarpus siliculosus... [more]
A0A836CBQ0_9STRA8.540e-1947.24Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A830H2D5_9CHLO2.110e-1835.05Uncharacterized protein n=1 Tax=Pycnococcus provas... [more]
A0A803MUX6_CHEQI3.170e-1733.60Uncharacterized protein n=3 Tax=Chenopodium quinoa... [more]
A0A5C7H7B2_9ROSI9.810e-1631.22Uncharacterized protein n=1 Tax=Acer yangbiense Ta... [more]
UPI000B8B7B304.460e-1533.05phosphoglycerate mutase-like protein 1 n=1 Tax=Spi... [more]
A0A3L6Q7T5_PANMI4.500e-1530.34Phosphoglycerate mutase-like protein 1 n=9 Tax=Pan... [more]
A0A2T7CRP6_9POAL4.780e-1529.49Uncharacterized protein n=2 Tax=Panicum hallii Tax... [more]
K3Y964_SETIT8.270e-1530.04Uncharacterized protein n=5 Tax=Setaria TaxID=4554... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig194contigP-littoralis_Contig194:157228..162980 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Pylaiella littoralis U1_48 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start0
Seed ortholog2880.D8LRC2
PFAMsHis_Phos_1
Model size1342
Max annot lvl2759|Eukaryota
Hectar predicted targeting categoryother localisation
Exons5
Evalue5.23e-110
EggNOG OGsKOG4754@1|root,KOG4754@2759|Eukaryota
Ec32 ortholog descriptionHistidine phosphatase superfamily, clade-1
Ec32 orthologEc-06_003070.1
Descriptionisomerase activity
Cds size1341
COG categoryS
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789933.3583462-CDS-P-littoralis_Contig194:157227..1578791680789933.3583462-CDS-P-littoralis_Contig194:157227..157879Pylaiella littoralis U1_48CDSP-littoralis_Contig194 157228..157879 -
1680789933.374061-CDS-P-littoralis_Contig194:158860..1590301680789933.374061-CDS-P-littoralis_Contig194:158860..159030Pylaiella littoralis U1_48CDSP-littoralis_Contig194 158861..159030 -
1680789933.3909268-CDS-P-littoralis_Contig194:159610..1597391680789933.3909268-CDS-P-littoralis_Contig194:159610..159739Pylaiella littoralis U1_48CDSP-littoralis_Contig194 159611..159739 -
1680789933.4020917-CDS-P-littoralis_Contig194:160189..1603281680789933.4020917-CDS-P-littoralis_Contig194:160189..160328Pylaiella littoralis U1_48CDSP-littoralis_Contig194 160190..160328 -
1680789933.4109912-CDS-P-littoralis_Contig194:162729..1629801680789933.4109912-CDS-P-littoralis_Contig194:162729..162980Pylaiella littoralis U1_48CDSP-littoralis_Contig194 162730..162980 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig194.57.1prot_P-littoralis_Contig194.57.1Pylaiella littoralis U1_48polypeptideP-littoralis_Contig194 157228..162980 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-littoralis_Contig194.57.1

>prot_P-littoralis_Contig194.57.1 ID=prot_P-littoralis_Contig194.57.1|Name=mRNA_P-littoralis_Contig194.57.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=447bp
RYDIFDLRSLNSEPPFLPLQASHHGLTPDGGGRGRDRRGYSMDASNLKCL
SFMRHSIATHNEAAAAYADAMDSVYLSEAYADASLSSRGHALVQSARQSK
LGLSPAPSIVLCSPLTRAIQTAIGMFGGTGIRILAVPEAREAHGRFPCDR
HRDKSELELMFGDRVDFSLCNAKDTVWSPYHREQMTHLDNRVARFVEGVL
RQREAAHVFVVSHGVFIESALRQLAHPFLGHSSENRVHNCDVNSFVFSVP
PPAPSSSSPSTFDTPSAAGGAHRHTNVQSGSRIAAPSATMTPNASGSGGS
GGGMSPMRPRVEAYLTGQDLDNACTAGMPLVAVAHINRVVRRFSGDGDGG
SGVSLTEEQFSTLLACCQLGPQETRWLYRALRREGGGGGGGGGRVASGDF
LLALMAFYPGEGGGGGGRGGGEAPAGSRGGMMVDLRRQYQREVRDD*
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mRNA from alignment at P-littoralis_Contig194:157228..162980-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-littoralis_Contig194.57.1 ID=mRNA_P-littoralis_Contig194.57.1|Name=mRNA_P-littoralis_Contig194.57.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=5753bp|location=Sequence derived from alignment at P-littoralis_Contig194:157228..162980- (Pylaiella littoralis U1_48)
AGGTATGATATCTTCGATCTCCGATCTCTGAACTCCGAACCGCCCTTCCT
CCCGCTGCAAGCGAGCCATCACGGTCTCACACCCGACGGTGGCGGGCGGG
GCCGGGACCGCCGCGGATATAGCATGGACGCTTCAAACTTGAAATGCTTG
AGCTTCATGCGTCACTCGATAGCAACCCATAACGAGGCTGCGGCGGCATA
TGCGGACGCTATGGATTCGGTCTATCTGAGCGAGGCCTACGCGGACGCAA
GGTAAATATAGATAGACTATACGAAGTACATGATCAGCACAGCAACCGTA
CCATACACCGGTAGTACCTGTATCATGCGTCCATACCAGTGAAGAAGCGT
TACGAGAGCATGGTGCTGGTGATGTGGCCTAGGGCAACGCCAACAGCAAC
GTGGACCCAGACAATGAGGATATGTTTAGGGCGACATCGTCATCAGCGTC
GCAAGGACGGCATGGAGACACCATGCTTGACAACATATGATGATACGTGT
GTTTTTTTGTGTTTTTTCTTTTTCTGTCTTCTCCGATTGCCGGGGCTACT
TGTACGTTGCAGGCAGCACTCCAGACAGCAACTAACTGCTGTAGTCTGCA
GCTACCTACTGACTGCTTGTAGCAGCAGGTACTTATAAGCAGCACTCCAG
ACAGCAACTAACTGCTGTAGTCTGCAGCTACCTACTGACTGCTTGTAGCA
GCAGGTTATTAGTTATAAGTGGGGCGGGAGGAGGCTGAACACGATGCTGT
AGTCAAATGAACGACGCTGGAAGTACGTTTGATGTTGGTACTGCTGTGAC
TGCTGTAGTTCAGTGATGTACACGGCGTAAGAAGGTGTATCTTCTTCGGT
CTTTCTTCGGTACGTATTCCCTTGTAGTTTCTTTCTGTTTGTTGGATCTT
CCTAGGGCTCAGCACTTTTTGTGACTACGGGCTAGATTTTGGCGATGAGC
TAATGTGAGAACCAACAACTCCGCAGTACACAGAAAGGATGCGCACAAGC
ATCGCGCTCTGCTGCGCCCAAGCTTACGGGTTTGCGCTTGGGTTCCCCGT
GCAGTACACACAGCCTGATGCGCGCTGTCTCTCCTTGCCTTGCCTTGCCC
TGCTTTGCCTTGTCGAGAAGGGGCTTGATTTGCCTTGCCCAACAGTATGT
GGTACTGCTGTACCGCATGGTACCCATGTTGTTCTCCTGACTCGCCTCGC
AAAACAGAGTGTCCATATCCCCTCCCTCACACCAAAAACCATATATGGGA
GTCTATTATTATACTTCGAGTATATCTTGATATCCCTTCCTTCACACCAA
ATCTCTGTTCAACATTCAACATTCACACCATTGGTGTGTGTCGTCCTCCC
ATTCATTCTGGACGCCAGCCTGCACCTTTCTTTCAGTATGAGCTGGGCGT
ATCAGCCGGGGTCACACGGGAGCAAAGGTCAACACGCAGGAGTTAAAAAA
AATGTTGTTCGTATATACACATTGGTACTTCGGAGTACATGAGTACATCT
CATACCATGCACTTCGTACTTCTGAAGTGCCATGTGTACATGATGAGGTG
GGACACCACCTATCATAACGATCCAAACTGCTGTTGTGTCGAGTCTAAAA
CTCGGCTCGAGAACAAATTTCGACGAAGAAGAGCGCCGGTCGACCTCTTC
TCGCGATGAAACGCCGAAAAGGAGCAAGAAAATGACACGCACCGCAAAAG
GAAGGCGAAGGAGAAGAAACAAAAAAATACTCCTCTGCTGTGTTGACCTT
TGTCCCCGTCTGGCCCTGGCTGGTGCGCCCCACTTACATAATGAGGTTAA
ACCAAAAGGCGTAGACTGCTGGCGTCCAGAATGGATGGGATGGCAACACA
CACTCACACATACAGGGGATTGCTGGTGTTGTCATTTATCATGGGAGCTT
CTACCGGAACCGGTGAACTTGCTCTTGAATCCTGAATCCTCGTCCAGATG
TCAGGCAGAGGAGGCGAACACACAGGGAGTAGTACACCGACCGATGGATT
TTCTTGTACGTACACAAAGGAAAAGATAAGCACGAACAGAGACACGTATG
ATAGGACCCTACAGGGGTACCTGGTGAGAGGCGATTGCGATTTTTAATGC
TCGACAAACTTCTCGACAGCGAGGAGATAGGAAACGATCTCGTCGAGCAG
TTTGGAGTTTACCGGCACTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTC
TCTCTCTTCGGTACGGGATAAACAACCGCGGTTTGGTACACGCAAAATGG
CGGTAGGATCGGTGCACAGGGGAATCCCGAGGGCATGGTTTACCGTAGAG
TGCGGCATTCACACATGATACATACATGCAGCGAAAGGCGACAACAATCT
TAACTGTACGACATTTCCCGACGGACGATGTCGTGTCTCCCCAACGATTA
CCACAAGCACACACACCCTTCATCCCCCTCCCCTCCCTTCCCCTCCCCTC
GAACTCCCGTTGTGTTCATCTCCCTCCCTCCCTCCCTCACTACTGACGAC
ACACACTCCTCGGCATTCGGGGCCAATCACACTCAGCATACTTTGACAGA
TATCCCCTCCGTATATTCTTGTGTTTTTTTCCTCCCTGTGGGCGTGTCGT
GTCTCCTCTTCCGTCGTGCCTGTGCCTGTCTCGCGTGTGTTGGTCGGCTC
AGTTTGTCTTCGAGGGGACACGCTCTGGTTCAAAGCGCGCGGCAGTCGAA
GCTCGGGCTCTCGCCGGCTCCGAGCATCGTCCTGTGCTCTCCTCTCACTA
GGGCGATCCAGACGGCGATCGGCATGTTCGGAGGAACAGGGGTGAGTGAG
ATAAACATATACTTCGAAGTATGTACTTCGAAGTACATGTGATATCGTAT
GATACAGTAGCGGCGGTCGCAAACAACGTGAAATATTTATTACCGGAGTG
CGTGTAGAAAGAAGCGAGCGTTGGTCAGCGGGTGTCCGGGGTCAAAAATC
ATCACTCGTGTGTCAAGACAGAGAAAGAGAGAGAGAGAGAGAGAGAGAGA
GAGAGAGAGAGAGAGGTGAAAGAGAGTGAAAGGGAGAGAGAGAGAGAGAG
AGAGAGAGAGACAGGGACAGGGAGAAGAGAGAGGTTAAACGAGGCAACGT
TTGTACGGTAGCGGCTACAACAGACAAACGGCCTTGTGGAGAAGGTGGTC
ATCCTCTTTCTCTTCGGAGTGATGTACCCCTATCATATGCTTCAGTTCAG
AGTATGATATGATGGCGCTTTTCGACGACTGCACGCTCCAGATTCGCATC
TTGGCGGTGCCCGAGGCGAGGGAAGCACACGGCAGATTCCCGTGCGACCG
ACACAGGGACAAGAGCGAGCTTGAACTCATGTTCGGGGACAGGGTGGACT
TCAGCCTCTGCAACGCCAAGGTGAGTGCAGTAAACAAACCGAACCGAACC
GAATTGAATCGAATCGAATCGAATCGAATCGAATCGAAGCGAGCCGAAAC
GAAACGACACGAAACGAAACGAAATAAAACGAAATAAAACGAAATAAAAC
GAAACAAAACGTTTGGTCGAATCAACACGGAAACCGGATCGGACTCTACC
CTCCCTTGTGTTTCTGGCTTCTGGCGCCCCTGCTTTGGGGGCTGCTTCAA
CATGGCTACTTACGTATGTGTCTATGTGTGTGTACGTGTGTGTATGATAT
GTAGATGGACGTGCCGGCCTCGCCCTTCGCCAGACAAATAACGTGAAAGT
CTTTTGATGGCATCCGACGTCGGAGCCTTCATCGTCGCTGATGACGTTGT
GATACAATCATACTTAAAAGTGCGCACACATGTTGGTCGGCGAACAGAAA
ATATTTTTGCTGGCATGTCAACCCCCCCCCCCCCCCTCCCCTGCTGCTGC
CGCCGCCGGAACGAGCACTCACGGAATTTTGGCTTTTGAAGTCATTTCAT
TTCAACCAACTCTTTGCCATCTTCCGAACGATCTGAACCCCCTCGCTCAG
GACACGGTGTGGTCGCCCTACCACCGCGAGCAGATGACCCACCTAGACAA
CCGCGTGGCCAGGTTCGTGGAAGGTGTTCTCCGGCAGCGGGAGGCCGCGC
ACGTGTTTGTGGTGTCGCACGGAGTGTTCATCGAGTCGGCGCTCCGGCAG
CTAGCCCACCCCTTCCTTGGGTGAGGGAGTCGGCCGGAAACGTTTGGTCG
AATGAAAGGGAACGGGGCTTCACTTCCACTTCACGCGCCCGCACTCTTCT
TTTTGTTTTTTTGTTTTCATACTTCGAAGTATGTAGGCAATTCCTTACAA
ACGCGTGTGTCTTTTTTCTGACAACGATTGTTCAGAAACACTGTCATTAC
TGTTGCCCGTTCTGGATGTATATACTGTATCATACAGGGAGAAAGGGAAA
GGCGGCACGCAGTTTCCTGATTGGTCAGTACCCCCTGGGGCGAAATGTTA
AAATCGACCCGAAGGAAGTTCCTTGGATGACGGTTGGTGTCACCCACGGT
CGATGGGGGAGGTGGACGGAATCAAGGGCACGGATGGATGGATGTACTGA
TGTCCTTTGTTAAGGTATCCATGTGACGTACAAGTCACGCAACAGCAGCA
GCGTCGCTCGTCAGTCGCGGGAACGATCGTTATGTTGGCGCTGCTGCTGC
TGCTGCTGCTGCTGCTGATCGCCCTGGTGGCGGTCGGGGGTCTCGGGGAT
GTTCACCACGCCGAGATGTCCCGTCCGTCGTGCTTGTGAGCACCGCCCTG
CCCTGATGAACGCGCGTAGCTCTCCCTTCTCCGGTCCGTGGTCCCTGGCT
TTCCCGACGTGTGCAGGCATCGGTGGTGTAGTCCCAGTCCGCGTGGATCG
CTTTCTCCCGCTTACGGACGTGGAGAATAACATATCTGAACATCTGCGCT
CGTACCCGACAGTGCCCCCCCTCGTCCCCGTCCCCGCCCCACCGTCCCAC
GCACGTCCGTGAACATGGCCATGAGAAAGGGATAAGTATACCCCGACAAA
AAAAAAGAAAACGAAAGTTCGTACGTGTGTTGTCATTGGAGCTATGATAT
GATTGATCGCTTCTTGTGACTTTTGCGGTGGAAGACAACAAACACGAACA
GGGCTTTCTTTTTTCCAACACAAGTTATTTGCCATCCATTTACTATGCCA
GGCACAGCAGCGAGAACCGTGTTCACAACTGCGACGTGAACTCATTTGTG
TTTTCGGTGCCGCCTCCAGCACCCTCCTCTTCCTCCCCCTCAACCTTTGA
TACACCATCAGCAGCAGGCGGCGCGCACCGCCACACCAACGTCCAGTCGG
GCAGCCGCATCGCCGCTCCTTCCGCGACGATGACACCAAACGCCAGCGGA
AGCGGCGGAAGCGGCGGGGGGATGTCCCCTATGCGTCCCCGGGTGGAGGC
GTACCTGACGGGGCAAGACTTGGACAACGCGTGTACTGCCGGGATGCCGC
TCGTCGCCGTCGCCCACATTAACCGCGTCGTTCGTCGCTTCTCCGGCGAC
GGCGACGGCGGCAGCGGCGTCAGTCTAACGGAGGAGCAGTTCTCGACCCT
GCTCGCGTGCTGCCAGCTCGGCCCGCAGGAGACCAGGTGGTTGTACCGGG
CACTGCGCCGAGAGGGTGGCGGCGGCGGCGGCGGCGGCGGGAGGGTGGCC
TCTGGGGACTTCCTGCTGGCACTGATGGCGTTTTATCCGGGGGAAGGGGG
GGGCGGGGGAGGGAGAGGGGGCGGGGAGGCCCCCGCTGGCAGTCGTGGCG
GGATGATGGTGGATCTGAGACGACAGTACCAGAGGGAGGTGAGGGATGAT
TGA
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Coding sequence (CDS) from alignment at P-littoralis_Contig194:157228..162980-

>mRNA_P-littoralis_Contig194.57.1 ID=mRNA_P-littoralis_Contig194.57.1|Name=mRNA_P-littoralis_Contig194.57.1|organism=Pylaiella littoralis U1_48|type=CDS|length=1341bp|location=Sequence derived from alignment at P-littoralis_Contig194:157228..162980- (Pylaiella littoralis U1_48)
AGGTATGATATCTTCGATCTCCGATCTCTGAACTCCGAACCGCCCTTCCT
CCCGCTGCAAGCGAGCCATCACGGTCTCACACCCGACGGTGGCGGGCGGG
GCCGGGACCGCCGCGGATATAGCATGGACGCTTCAAACTTGAAATGCTTG
AGCTTCATGCGTCACTCGATAGCAACCCATAACGAGGCTGCGGCGGCATA
TGCGGACGCTATGGATTCGGTCTATCTGAGCGAGGCCTACGCGGACGCAA
GTTTGTCTTCGAGGGGACACGCTCTGGTTCAAAGCGCGCGGCAGTCGAAG
CTCGGGCTCTCGCCGGCTCCGAGCATCGTCCTGTGCTCTCCTCTCACTAG
GGCGATCCAGACGGCGATCGGCATGTTCGGAGGAACAGGGATTCGCATCT
TGGCGGTGCCCGAGGCGAGGGAAGCACACGGCAGATTCCCGTGCGACCGA
CACAGGGACAAGAGCGAGCTTGAACTCATGTTCGGGGACAGGGTGGACTT
CAGCCTCTGCAACGCCAAGGACACGGTGTGGTCGCCCTACCACCGCGAGC
AGATGACCCACCTAGACAACCGCGTGGCCAGGTTCGTGGAAGGTGTTCTC
CGGCAGCGGGAGGCCGCGCACGTGTTTGTGGTGTCGCACGGAGTGTTCAT
CGAGTCGGCGCTCCGGCAGCTAGCCCACCCCTTCCTTGGGCACAGCAGCG
AGAACCGTGTTCACAACTGCGACGTGAACTCATTTGTGTTTTCGGTGCCG
CCTCCAGCACCCTCCTCTTCCTCCCCCTCAACCTTTGATACACCATCAGC
AGCAGGCGGCGCGCACCGCCACACCAACGTCCAGTCGGGCAGCCGCATCG
CCGCTCCTTCCGCGACGATGACACCAAACGCCAGCGGAAGCGGCGGAAGC
GGCGGGGGGATGTCCCCTATGCGTCCCCGGGTGGAGGCGTACCTGACGGG
GCAAGACTTGGACAACGCGTGTACTGCCGGGATGCCGCTCGTCGCCGTCG
CCCACATTAACCGCGTCGTTCGTCGCTTCTCCGGCGACGGCGACGGCGGC
AGCGGCGTCAGTCTAACGGAGGAGCAGTTCTCGACCCTGCTCGCGTGCTG
CCAGCTCGGCCCGCAGGAGACCAGGTGGTTGTACCGGGCACTGCGCCGAG
AGGGTGGCGGCGGCGGCGGCGGCGGCGGGAGGGTGGCCTCTGGGGACTTC
CTGCTGGCACTGATGGCGTTTTATCCGGGGGAAGGGGGGGGCGGGGGAGG
GAGAGGGGGCGGGGAGGCCCCCGCTGGCAGTCGTGGCGGGATGATGGTGG
ATCTGAGACGACAGTACCAGAGGGAGGTGAGGGATGATTGA
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