prot_P-littoralis_Contig194.38.1 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig194.38.1
Unique Nameprot_P-littoralis_Contig194.38.1
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length743
Homology
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BLAST of mRNA_P-littoralis_Contig194.38.1 vs. uniprot
Match: D8LRC5_ECTSI (Cyclin_C domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LRC5_ECTSI)

HSP 1 Score: 382 bits (980), Expect = 9.320e-120
Identity = 359/687 (52.26%), Postives = 390/687 (56.77%), Query Frame = 0 
Query:  106 MEPFDAERFVDRLVEE---SPWRRQV----NGTKWSPLASGXXXXXXXXX--AKLFLHLPPQXXXXXXQLQQPFPLGGPPG--CDAGHHXXXXXXXXXXXXXXMPMIIPHDPILDALFTPCRVM--------------PAAVTLGLVKVEQNFGYHGANGAGGGGAITNNKNGIMGFEPARVYNIPPPVE---AYTTSLQVPMAPLRQPSGGRFGVGIYPPGSSSNIQSAHEQSPTGLNT------TYLNTTAQNNSNNFPGNFSAXXXXXXXXXXXXXXXIVPLTGADSHSSLEYDDERHDFLRRQEVALYVGPEYLASASAFPGNGRLAAGTSAVTPAERAALVDWLSGLHATAPAASGGGGEPLSLDTLFLAVNLMDRFLSTAEGARTVQYTDGRGSGGGPRPALKLAGAGCLALSSKYHDTQAVSLWGVAAASLSTSRAAESLHVGGXXXXXXXXXXXXXXX----FFGVLGASGGX----LXXXXXXXXXXXXXXVSAARKELAAMEMRVASALTFRLTVPTALTFLGVYLRRAGALGYLQAGAPSSERVREEAQQILLCVMRDASSLEHPPSALAASALYWASCVTSPAAAPPASFAFSAVTGYELEQLCRCLRDMEGVRTGGGGVRHGSGSLSSPSGVGGGGGDF--------WAGAAFPEHAGKSLFGAGGGHPAIAAL 742
            MEPFDAERFVDRLVE+   + W R       G  W      XXXXXXXXX  AKLF  +            QP+ +G   G        XXXXXXXXXXX   MPMI+PHDPILDA+FTPCR +              P AVT GLV+V       G  GAG        KN I  F P  +YNIPP      +Y  SLQVPMAPLRQPSGGR      PP     IQSA E+SP           TYLN   + NSNN P  FS  XXXXXXXXXXXXX   PLTGAD+HSS EYDDERH FLRRQE AL  G  Y+              G   V PA R+A VDWLS LH        GGG  L L                                    PA+KLAGA CL L+SKY D                           XXXXXXXXXXXXXXX    FFGVLGA         XXXXXXXXXXX   V AARKELAA EM+VASAL FRLTVPT+L+FLGV+LRRA  LGY+ A  P  ERVR EA+QILLC++R++ SLEHPPSALAASALYWASCVT+P AAPP SFAF AVTGYELEQLC CLRDME VRTGGG    G+GS +S S                 WAGAAFPEHA  SLFGAGGGHPAIAAL
Sbjct:    1 MEPFDAERFVDRLVEDPAPTAWGRGGLVGGGGRVWEXXXXXXXXXXXXXXXAAKLFQPV------FNFDEHQPYLVGDGGGYXXXXXXXXXXXXXXXXXXSQDMPMIVPHDPILDAIFTPCRAVLPSTHHYHHPAEAAPVAVTCGLVRVPSG----GRFGAG-------KKNEIAAFRPELLYNIPPXXXXEVSYAASLQVPMAPLRQPSGGRRLYSSSPPRGRVMIQSA-ERSPAAAAARLVAVATYLN--KEENSNNIPVEFSPSXXXXXXXXXXXXX-XXPLTGADAHSSREYDDERHAFLRRQEAALAAGARYIT-------------GGVVVDPAARSAAVDWLSRLHGAKTVWGDGGGGVLLLG-----------------------------------PAVKLAGAACLVLASKYQDQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDFFGVLGAGDSLGLXXXXXXXXXXXXXXNADVRAARKELAATEMQVASALGFRLTVPTSLSFLGVFLRRAEGLGYVLADGPGRERVRREAEQILLCMLRESCSLEHPPSALAASALYWASCVTTPGAAPPTSFAFLAVTGYELEQLCCCLRDMEAVRTGGGRRYDGAGSFASCSSPAAXXXXXXXXXXXXDWAGAAFPEHADNSLFGAGGGHPAIAAL 618
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig194.38.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LRC5_ECTSI9.320e-12052.26Cyclin_C domain-containing protein n=2 Tax=Ectocar... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013763Cyclin-likeSMARTSM00385cyclin_7coord: 418..580
e-value: 0.48
score: 14.0
coord: 597..687
e-value: 0.27
score: 16.5
IPR013763Cyclin-likeCDDcd00043CYCLINcoord: 438..496
e-value: 5.24721E-4
score: 37.6033
IPR004367Cyclin, C-terminal domainSMARTSM01332Cyclin_C_2coord: 589..706
e-value: 1.0E-8
score: 45.0
IPR004367Cyclin, C-terminal domainPFAMPF02984Cyclin_Ccoord: 589..687
e-value: 5.0E-10
score: 39.5
NoneNo IPR availableGENE3D1.10.472.10coord: 402..582
e-value: 2.3E-11
score: 45.6
NoneNo IPR availableGENE3D1.10.472.10coord: 583..692
e-value: 1.5E-14
score: 56.1
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 169..195
IPR006671Cyclin, N-terminalPFAMPF00134Cyclin_Ncoord: 406..586
e-value: 6.1E-8
score: 32.5
IPR039361CyclinPANTHERPTHR10177CYCLINScoord: 328..681
IPR036915Cyclin-like superfamilySUPERFAMILY47954Cyclin-likecoord: 364..502
IPR036915Cyclin-like superfamilySUPERFAMILY47954Cyclin-likecoord: 572..688

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig194contigP-littoralis_Contig194:126280..128508 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig194.38.1mRNA_P-littoralis_Contig194.38.1Pylaiella littoralis U1_48mRNAP-littoralis_Contig194 126024..128961 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig194.38.1 ID=prot_P-littoralis_Contig194.38.1|Name=mRNA_P-littoralis_Contig194.38.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=743bp
MMMQEQPPRFIAGPPGHQANNEETTVSTATWVPVSRGCSGHQGLVPPSTC
CVVDETAAAVFYEGGSASDGSAATTGGSDETMQSGGHPGRLRALVDSAIE
DSDEEMEPFDAERFVDRLVEESPWRRQVNGTKWSPLASGGGGGGGGGAAK
LFLHLPPQPPQQLQQLQQPFPLGGPPGCDAGHHHHHHHHQKQKQGQGMPM
IIPHDPILDALFTPCRVMPAAVTLGLVKVEQNFGYHGANGAGGGGAITNN
KNGIMGFEPARVYNIPPPVEAYTTSLQVPMAPLRQPSGGRFGVGIYPPGS
SSNIQSAHEQSPTGLNTTYLNTTAQNNSNNFPGNFSAAAVTTAAAAAATT
TTIVPLTGADSHSSLEYDDERHDFLRRQEVALYVGPEYLASASAFPGNGR
LAAGTSAVTPAERAALVDWLSGLHATAPAASGGGGEPLSLDTLFLAVNLM
DRFLSTAEGARTVQYTDGRGSGGGPRPALKLAGAGCLALSSKYHDTQAVS
LWGVAAASLSTSRAAESLHVGGGAGGGGGGGGGGGGGFFGVLGASGGGLG
LGDGSSNGNGDIDVSAARKELAAMEMRVASALTFRLTVPTALTFLGVYLR
RAGALGYLQAGAPSSERVREEAQQILLCVMRDASSLEHPPSALAASALYW
ASCVTSPAAAPPASFAFSAVTGYELEQLCRCLRDMEGVRTGGGGVRHGSG
SLSSPSGVGGGGGDFWAGAAFPEHAGKSLFGAGGGHPAIAAL*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013763Cyclin-like
IPR004367Cyclin_C-dom
IPR006671Cyclin_N
IPR039361Cyclin
IPR036915Cyclin-like_sf