mRNA_P-littoralis_Contig194.36.1 (mRNA) Pylaiella littoralis U1_48

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-littoralis_Contig194.36.1
Unique NamemRNA_P-littoralis_Contig194.36.1
TypemRNA
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Homology
BLAST of mRNA_P-littoralis_Contig194.36.1 vs. uniprot
Match: D8LRC6_ECTSI (Monooxygenase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LRC6_ECTSI)

HSP 1 Score: 724 bits (1870), Expect = 7.040e-258
Identity = 392/505 (77.62%), Postives = 423/505 (83.76%), Query Frame = 1
Query:  121 AAVVAVAACFPVA-RGFSVPSLGHTHPSGAGLTSRNPSLETHRVDSYRPPSFRRGTPPXXXLTMVATTPVVKRVAIIGAGVGGLTLANALSAGAMAVDEVQVFEKFDSNKPGIGGGVQINSGAVILARLGLGDAIRAGGNPVERILSRTIGGRVVLDLDVVKMVRSDPKRKAMMVDNGTPMLFTIMRDRLMQILTEGLPSGVVNTRREVVSVEESPSGATLRFGDGSAQGPFDLVVGADGIKGAARKAVKAARGXXXXXXXXXXNGGDAIYSGIRIQYGVASAGQRPEGSEREVHQWFGGDTYGLSATYQGVGDEKFEMVAAIYQDRDRKEENAVWDQVEAKEACLQRLDERGFPDEMKASAEASDRFYELGVYYRNPLEGWVSRGEGQVVLLGDAAHAMPPNLGQGANQAIQDAYCLAERLADLNRGVAYDGSLVDALQDYERARKPDTALVLAKSVFVGAVETLGGAAGGGAAGEAFRDNFFFGMWKAGVAEQVFMDGAMPKV 1632
            AA +A AAC   A  GF VPS G   PS           +T R+    P S       XXX       PVVKRVAI+GAGVGGLTLANAL  G+ AVDEV+VFEKFDS KPGIGGGVQINSGAVILARLGLGDA++AGGN VERILSRT+GGRV LDLDV KMV+S+PKR+++MVDNGTPMLFTIMRDRLMQIL  GLPSGVV+T REV SVEESPSGA LRF DGS +GPFDLVVGADGIKGAARKAV+A  G          +  DAIYSGIR+QYGVA AGQRPEGSERE+HQWFGGDTYGLSATYQG+GD+KFEMVAA+YQDRDRKEENAVWDQVEAK ACL+RLDER FP EM+A AEASDRFYELGVYYRNPLEGWVSRGEGQVVLLGDAAHAMPPNLGQGANQAIQDAYCLA RLADLN G A++GSL+ AL+DYERARKPDT+LVLAKS FVGAVETLGGAAGGGA GEAFRDNFFFGMWKAGVAEQ+FMDGAMPKV
Sbjct:    8 AAAIAAAACMLSAVTGFVVPSAGSCGPSAD-------VAKTRRILGTAP-SRTTVAQXXXXXXXXXAAPVVKRVAIVGAGVGGLTLANALCTGSTAVDEVKVFEKFDSVKPGIGGGVQINSGAVILARLGLGDAVKAGGNQVERILSRTVGGRVTLDLDVKKMVQSNPKRRSVMVDNGTPMLFTIMRDRLMQILAGGLPSGVVSTSREVTSVEESPSGAKLRFADGSTEGPFDLVVGADGIKGAARKAVRAGPGGGSGG-----DNDDAIYSGIRVQYGVAPAGQRPEGSERELHQWFGGDTYGLSATYQGIGDKKFEMVAALYQDRDRKEENAVWDQVEAKGACLRRLDERRFPREMRALAEASDRFYELGVYYRNPLEGWVSRGEGQVVLLGDAAHAMPPNLGQGANQAIQDAYCLARRLADLNSGAAFEGSLIAALRDYERARKPDTSLVLAKSAFVGAVETLGGAAGGGALGEAFRDNFFFGMWKAGVAEQIFMDGAMPKV 499          
BLAST of mRNA_P-littoralis_Contig194.36.1 vs. uniprot
Match: A0A6H5KSV7_9PHAE (FAD_binding_3 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KSV7_9PHAE)

HSP 1 Score: 535 bits (1378), Expect = 4.300e-186
Identity = 273/320 (85.31%), Postives = 288/320 (90.00%), Query Frame = 1
Query:  673 MRDRLMQILTEGLPSGVVNTRREVVSVEESPSGATLRFGDGSAQGPFDLVVGADGIKGAARKAVKAARGXXXXXXXXXXNGGDAIYSGIRIQYGVASAGQRPEGSEREVHQWFGGDTYGLSATYQGVGDEKFEMVAAIYQDRDRKEENAVWDQVEAKEACLQRLDERGFPDEMKASAEASDRFYELGVYYRNPLEGWVSRGEGQVVLLGDAAHAMPPNLGQGANQAIQDAYCLAERLADLNRGVAYDGSLVDALQDYERARKPDTALVLAKSVFVGAVETLGGAAGGGAAGEAFRDNFFFGMWKAGVAEQVFMDGAMPKV 1632
            MRDRLMQIL  GLPSGVV+T REV SVEESPSGATLRF DGSA+GPFDLVVGADGIKGAARKAV+A  G             DAIYSGIRIQYGVA AGQRPEGSERE+HQWFGGDTYGLSATYQG+GD+KFEMVAA+YQDRDRKEENAVWDQVEAK ACL+RLDERGFP EM+A AEASDRFYELGVYYRNPLEGWVSRGEGQVVLLGDAAHAMPPNLGQGANQAIQDAYCLA RLADLN G A++GSL+ AL+ YER RKPDT+LVLAKS FVGAVETLGGAAGGGA GEAFRDNFFFGMWKAGVAEQ+FMDGAMPKV
Sbjct:    1 MRDRLMQILAGGLPSGVVSTSREVTSVEESPSGATLRFADGSAEGPFDLVVGADGIKGAARKAVRAGPGGGSGGGND-----DAIYSGIRIQYGVALAGQRPEGSERELHQWFGGDTYGLSATYQGIGDKKFEMVAAVYQDRDRKEENAVWDQVEAKGACLRRLDERGFPQEMRALAEASDRFYELGVYYRNPLEGWVSRGEGQVVLLGDAAHAMPPNLGQGANQAIQDAYCLAGRLADLNSGAAFEGSLIAALRYYERVRKPDTSLVLAKSAFVGAVETLGGAAGGGAVGEAFRDNFFFGMWKAGVAEQIFMDGAMPKV 315          
BLAST of mRNA_P-littoralis_Contig194.36.1 vs. uniprot
Match: A0A836CJN1_9STRA (Monooxygenase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CJN1_9STRA)

HSP 1 Score: 373 bits (958), Expect = 9.120e-121
Identity = 222/438 (50.68%), Postives = 287/438 (65.53%), Query Frame = 1
Query:  328 VKRVAIIGAGVGGLTLANALSAGAMAVDEVQVFEKFDSN-KPGIGGGVQINSGAVILARLGLGDAIRAGGNPVERILSRTIGGRVVLDLDVVKMVRSDPKRKAMMVDNGTPMLFTIMRDRLMQILTEGLPSGVVNTRREVVSVEESPSGATLRFGDGSA-QGPFDLVVGADGIKGAARKAVKAARGXXXXXXXXXXNGGDAIYSGIRIQYGVASAGQRPEGSEREVHQWFGGDTYGLSATYQGVGDEKFEMVAAIYQDRDRKEENAVWDQVEAKEACLQRLDERGFPDEMKASAEASDRFYELGVYYRNPLEGWVSRGEGQVVLLGDAAHAMPPNLGQGANQAIQDAYCLAERLADLNRGVAYDGSLVDALQDYERARKPDTALVLAKSVFVGAVETLGGAAGGGAAGEAF-RDNFFFGMWKAGVAEQVFMDGAMPKV 1632
            ++R+AI+GAG GGLTLANAL      VDEV+VFE+  SN +PG GGG+QINSGA IL  LG GD + A    + R+L+R   GRV+LDLDV++   ++ +R +          + IMRDRL Q+L   LP G +   +EV ++E++  G +LRF DGSA Q P+D+VVGADGI GA + AV                   A+ SG+RIQ GV  AG RP G++ E+HQWFGG+TY L+ATY G+G  K EM+A +YQDR    EN  W   +  +  + RL+ER FP E+   A+  DRF+++GV YRNPL  W S  +G++VLLGD+AHAMPP LGQGANQAIQDAYCLAERL  L RG    GS+ +A++ YE  RKP  A +LAKSVF+G VETL G  G      AF RDNFF  M   GVAE++F+DG +P+V
Sbjct:   28 LRRIAIVGAGAGGLTLANALRKLDTGVDEVEVFERSVSNLQPGTGGGIQINSGASILRLLGFGDELDASAQRITRVLTRAASGRVLLDLDVLEA--AERRRNSGQFAASDLKFYAIMRDRLQQMLLAQLPDGCLQLGKEVTNLEQTDKGVSLRFRDGSASQRPYDMVVGADGIAGAVKAAVSGTETP-------------AVDSGLRIQLGVG-AGNRPSGADSELHQWFGGNTYALTATYGGIGG-KSEMIAIVYQDRKPMGENIGWQTADVTQDAVTRLEERCFPQEVVNVAKGCDRFFQVGVRYRNPLTKWSST-DGRMVLLGDSAHAMPPTLGQGANQAIQDAYCLAERLQALKRGDY--GSVREAVRSYEATRKPLVASLLAKSVFLGGVETLDGPVG------AFVRDNFFSVMGTVGVAEKIFVDGGVPRV 439          
BLAST of mRNA_P-littoralis_Contig194.36.1 vs. uniprot
Match: R1CJR6_EMIHU (Hypothetical protein n=1 Tax=Emiliania huxleyi TaxID=2903 RepID=R1CJR6_EMIHU)

HSP 1 Score: 322 bits (824), Expect = 1.750e-100
Identity = 211/459 (45.97%), Postives = 271/459 (59.04%), Query Frame = 1
Query:  289 PXXXLTMVATTPVVKRVAIIGAGVGGLTLANALSAGAMAVDEVQVFEKFDSNKPGIGGGVQINSGAVILARLGLGDAIRAGGNPVERILSRTIGGRVVLDLDVVKMVRSDPKRKAMMVDNGTPMLFTIMRDRLMQILTEGLPSGVVNTRREVVSVEESPSGATLRFGDGSAQGPFDLVVGADGIKGAARKAVKAARGXXXXXXXXXXNGGDAI---YSGIRIQYGVASAG-QRPEGSEREVHQWFGGDTYGLSATY-QGVGD-EKFEMVAAIYQDRDRKE----ENAVWDQVEAKEACLQRLDERGFPDEMKASAEASDRFYELGVYYRNPLEGWVSRGEGQVVLLGDAAHAMPPNLGQGANQAIQDAYCLAERLADLNRGVAYDGSLVDALQDYERARK-PDTALVLAKSVFVGAVETLGGAAGGGAAGEAFRDNFFFGMWKAGVAEQVFMDGAMPKV 1632
            P   L    T    +RVA++GAG+GGL LA AL      V+EV VF++    KPG+GGG+QIN GA +LARLGLG+ ++A   PV RILSR  GG  +LD+DV  +V ++P   A++  +GTP  F+IMRD L +IL + LP G V   + + S+ E  +G  L F  G+A+  FDLVVGADG+    R+ V A+             GG A    YSGIR+Q+GV  AG  RP GSE E HQWFG   Y L+ +Y  G  D    +MVA ++ DR        EN+ W+  + +E C+ RL   G P E+ + AE  +R +ELGVY  +    WVSRG G+ VLLGDAAHAM P LGQGANQAIQD YCLA+RLA    G      ++  LQ Y   R+ P TAL L +S  +GA+ET GG  G G   +  RD FF    K GVA QVF+ GA P V
Sbjct:   15 PVASLVASPTPTSPRRVAVVGAGIGGLALARALQTLDTGVEEVAVFDRRSELKPGVGGGIQINGGAAVLARLGLGEQMKASALPVRRILSRKSGGFELLDIDVESLVSAEP---ALVAPDGTPQAFSIMRDALQRILADSLPVGTVRLGQRLESLREDDAGVELLFEGGAAE-RFDLVVGADGLSSRVREHVAASHAAE--------GGGGATPPEYSGIRVQFGVVPAGGARPAGSEGEFHQWFGEGVYALTGSYGTGAADGATSDMVAVVFADRAAGSAAPPENSNWEASDVREDCVGRLRRAGIPAEVVSVAEQCERCFELGVYEHDATAPWVSRG-GRAVLLGDAAHAMAPFLGQGANQAIQDGYCLADRLAAARAG-GLAARVMGPLQSYALLRRAPVTALQL-ESRLLGAMETAGG--GAGTLPQFVRDAFFLANGKLGVAAQVFVKGARPWV 456          
BLAST of mRNA_P-littoralis_Contig194.36.1 vs. uniprot
Match: A0A7S1UMX4_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1UMX4_9STRA)

HSP 1 Score: 319 bits (817), Expect = 8.450e-100
Identity = 197/443 (44.47%), Postives = 262/443 (59.14%), Query Frame = 1
Query:  331 KRVAIIGAGVGGLTLANALSA--GAMA-VDEVQVFEKFDSNKPGIGGGVQINSGAVILARLGLGDAIRAGGNPVERILSRTIGGRVVLDLDVVKMVRSDPKRKAMMV---DNGTPMLFTIMRDRLMQILTEGLPSGVVNTRREVVSVEESPSGAT-LRFGDGSAQGPFDLVVGADGIKGAARKAVKAARGXXXXXXXXXXNGGDAIYSGIRIQYGVASAGQRPEGSEREVHQWFGGDTYGLSATYQGVGDEKFEMVAAIYQDRDRKE--ENAVWDQVEAKEACLQRLDERGFPDEMKASAEASDRFYELGVYYRNPLEGWVSRGEGQVVLLGDAAHAMPPNLGQGANQAIQDAYCLAERLADLNRGVAYDGSLVDALQDYERARKPDTALVLAKSVFVGAVETLGGAAGGGAAGEAFRDNFFFGMWKAGVAEQVFMDGAMPKV 1632
            +RVA++GAG GGL LA AL A  GA A V++V VFE+    +PG+GGG+Q++ GA +LA LGL D ++A  NP+E + +RT+    +L LDV   +R      A +V   D    + + +MRD L ++L   L +  V   ++V  + E   G   L F +G A G FDLV+ ADGI+    +A  AA G              AIYSG RIQYGV    +RP G +   HQWFG   Y L ATY G G  + +MVA +++D       ENA WD  + +  C++RL     P+E+ A AEA++RF+ELGVY+  P   W +  +G+VVL+GDAAHAMPP LGQGANQA+QDAYCLA  L D+N G A   SL  AL  YE  R+P T  +LAKS F+G +ETL G           R+ FF      GVAE+VF+DGAMP+V
Sbjct:    8 QRVAVVGAGPGGLALARALEALGGAGAGVEDVTVFERRAGLEPGLGGGLQLSGGAAVLAELGLLDELKAIANPLEGVRARTVERATLLTLDVPAAIRRRRDAAAALVKGADGDDTLTYAVMRDALQRMLRRSLRTSRVELGKDVQRIVEGADGKVGLEFANGEASGGFDLVIAADGIRAGVLEAAGAAAGA-------------AIYSGKRIQYGVIPEAKRPPGEQSAFHQWFGKGVYSLCATYGGEGGARSDMVALVFRDDGGSAAGENADWDAADIRGDCVRRLRAAAMPEEVVALAEAAERFFELGVYFHLPRPSWRAGSKGRVVLMGDAAHAMPPFLGQGANQAVQDAYCLAAALRDVNAGAA---SLDAALSKYEAVRRPPTVELLAKSAFLGELETLPGEL------SRLRNGFFSVTGALGVAEKVFVDGAMPRV 428          
BLAST of mRNA_P-littoralis_Contig194.36.1 vs. uniprot
Match: A0A7S2RL63_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RL63_9STRA)

HSP 1 Score: 305 bits (781), Expect = 2.810e-94
Identity = 199/458 (43.45%), Postives = 267/458 (58.30%), Query Frame = 1
Query:  334 RVAIIGAGVGGLTLANALSAGAMAVDEVQVFEKFDSNKPGIGGGVQINSGAVILARLGLGDAIRAGGNPVERILSR----TIGG------RVVLDLDVVKMVRS--DPKRKAMMVDNGTPMLFTIMRDRLMQILTEGLPSGVVNTRREVVSVEESPS--GATLRFGDGSAQGPFDLVVGADGIKGAARKAVKAARGXXXXXXXXXXNGGDAIYSGIRIQYGVA-SAGQRPEGSEREVHQWFGGDTYGLSATYQGVGDEKFEMVAAIYQDRDRKEENAVWDQVEAKEACLQRLDERGFPDEMKASAEASDRFYELGVYYRNPLEGWV-------SRGEGQVVLLGDAAHAMPPNLGQGANQAIQDAYCLAERLA---DLNRGVAYDGSLVDALQDYERARKPDTALVLAKSVFVGAVETLGGAAGGGAAGEAFRDNFFFGMWKAGVAEQVFMDGAMPKV 1632
            RV +IG G+GGL+LANAL     A D V VF+K    +PG+GGGVQ+  GA +LARLG G+ + A G+P+ R+L+R     +GG      + +LDLDV   +    D +   ++ D G  M FTIMRD L+++L   LP G+V   + +  +E S    G    F D S +  FDLVVG DGI+ A R+ V               +G    YSG+RI++GVA S G R  GS  E+HQWF    Y L+ATY GVG E+++M+A    D++    NA WD  E ++   + L++ GFP E+ + AE+S RF+++GV ++NPL  WV       +RG    VLLGDAAHAMPP LGQGANQAIQDAYCLAE L    D +R V        AL  YE  RKP T+L++ +S F+G +ETL GA      G  FR+ FF      GVA+ +F  GA P+V
Sbjct:    9 RVGVIGGGIGGLSLANALIQQDSAFD-VTVFDKAAVLRPGLGGGVQLTGGAAVLARLGFGEELVAAGHPLRRVLTRKVPPAVGGAGAVEPKQLLDLDVRSALADLEDARETGLLQDTGDVMAFTIMRDELLRMLAARLPEGMVRYGKRLEGLERSDGEEGIQCTFDDASTE-TFDLVVGCDGIRSAVREWVLEGN-----------DGARETYSGLRIRFGVAPSCGGRGAGSREEMHQWFADGAYALTATYGGVGGEEYDMIALTTTDKNEVGPNANWDSSEVQQDTCRILNDLGFPGEVLSIAESSTRFFDIGVRFQNPLLPWVRSDGNFWTRGSAAAVLLGDAAHAMPPFLGQGANQAIQDAYCLAEELGAVGDRHRDVQ------GALAAYEVRRKPVTSLLMLESRFLGRLETLQGA------GAEFRNLFFQATGTLGVAKAIFTKGASPRV 441          
BLAST of mRNA_P-littoralis_Contig194.36.1 vs. uniprot
Match: A0A812I7S9_9DINO (PrhF protein n=1 Tax=Symbiodinium natans TaxID=878477 RepID=A0A812I7S9_9DINO)

HSP 1 Score: 286 bits (733), Expect = 1.970e-86
Identity = 192/442 (43.44%), Postives = 259/442 (58.60%), Query Frame = 1
Query:  334 RVAIIGAGVGGLTLANALSAGAMAVDEVQVFEKFDSNKPGIGGGVQINSGAVILARLGLGDAIRAGGNPVERILSRTIGGRVVLDLDVVKMVRS-DPKRKAMMVDNGTPMLFTIMRDRLMQILTEGLPSGVVNTRREVVSVEESPSG--ATLRFGDGSAQGPFDLVVGADGIKGAARKAVKAARGXXXXXXXXXXNGGDAI----YSGIRIQYGVASAGQRPEGSEREVHQWFGGDTYGLSATYQGVGDEKFEMVAAIYQDRDRKEENAVWDQVEAKEACLQRLDERGFPDEMKASAEASDRFYELGVYYRNP-LEGWVSRGEGQVVLLGDAAHAMPPNLGQGANQAIQDAYCLAERLADLN-RGVAYDGSLVDALQDYERARKPDTALVLAKSVFVGAVETLGGAAGGGAAGEAFRDNFFFGMWKAGVAEQVFMDGAMPKV 1632
            RVA++GAG  GL  A AL   A  +D++ V E+    +PG+GGGVQ++SGA +L  LG+  +      P+ RI SR+  G  +L LD+  ++ + +    ++   +G P   T+MRD L++ + + LPSG +   R+++ V+ SP G  AT RF  G  Q  FDLVV ADGI  +AR+ V               + GD      Y+G+RIQYGV  AG RP G E E HQWFG   Y L+ATY G+G ++FEM+A ++++     ENA WD VE K++CLQRL E G P E+   AE   RF+ELGV+ R   L  W      +VVLLGD+AHAMPP LGQGANQAIQDA CLA  L  +N    A +G+L  AL  Y   R P  A++  +S F+G VETL G  GG       R+NFF      GVA  VF++GA+ +V
Sbjct:   86 RVAVVGAGPAGLAAALALRKEA-GLDDITVLERSPELRPGVGGGVQLHSGAALLEELGVDLSFA---QPLRRIRSRSASGDELLQLDLPNLLDTFEAFSGSVRRSDGQPASCTVMRDALLEAMAKSLPSGSIRLGRKLLDVQMSPGGQSATCRFEAG--QEDFDLVVAADGIGSSARRFV--------------LDEGDQEEAPRYTGLRIQYGVREAGGRPAGCEEEAHQWFGQGVYALTATYGGLGGKRFEMMAVVFREDAPAAENADWDPVEIKDSCLQRLREAGHPAEVMEVAEGCSRFFELGVFERPVGLSNW---HRDRVVLLGDSAHAMPPFLGQGANQAIQDAVCLARWLRRVNFADAASEGALQAALLGYTAQRLPPVAVLGIESSFLGQVETLPGDLGG-----LVRENFFRLTAGTGVAGLVFLNGAIARV 499          
BLAST of mRNA_P-littoralis_Contig194.36.1 vs. uniprot
Match: A0A7S2XFF1_9EUKA (Hypothetical protein n=1 Tax=Lotharella oceanica TaxID=641309 RepID=A0A7S2XFF1_9EUKA)

HSP 1 Score: 279 bits (714), Expect = 2.850e-85
Identity = 167/391 (42.71%), Postives = 231/391 (59.08%), Query Frame = 1
Query:  472 INSGAVILARLGLGDAIRAGGNPVERILSRTIGGRVVLDLDVVKMVRSDPKRKAMMVDNGTPMLFTIMRDRLMQILTEGLPSGVVNTRREVVSV--EESPSGATLRFGDGSAQGPFDLVVGADGIKGAARKAVKAARGXXXXXXXXXXNGGDAIYSGIRIQYGVASAGQRPEGSEREVHQWFGGDTYGLSATYQGVGDEKFEMVAAIYQDRDRKE--ENAVWDQVEAKEACLQRLDERGFPDEMKASAEASDRFYELGVYYRNPLEGWVSRGEGQVVLLGDAAHAMPPNLGQGANQAIQDAYCLAERLADLNRGVAYDGSLVDALQDYERARKPDTALVLAKSVFVGAVETLGGAAGGGAAGEAFRDNFFFGMWKAGVAEQVFMDGAMPKV 1632
            +N GA +LARLGLG+ I   G PV+ + +RT  G  +L++DV K V  +P     +V  GTPM FTIMRD L ++L + L  G + T + +V +  +E   G  L F DG+ +   D+V+GADGI+   +K      G             D  Y+ IRIQ+GVA   +R     +E+HQWF   TY LS  Y+G+  + FEM A ++ D +  E  EN+ W+  E K+ CL+RL E G P E+    +  +RF+E+GV+Y   L  W S   G+ VL+GDAAHAMPP LGQGANQAIQDA+CL ++L++L  G     +L DA++ YER RK  T+ +  +S F+G +ET GG  G G      RD+FFF   K GVAE+VF+ GA P V
Sbjct:    1 VNGGAAVLARLGLGEEIIKAGLPVKSVRTRTAQGWELLNIDVQKAVAQEPS----LVYKGTPMCFTIMRDSLQKVLADSLDEGTIQTNKRLVGLKHDEPTGGVRLTFEDGTEE-LVDMVIGADGIRSTVKKETFPGPGR------------DPTYANIRIQFGVAEGWERAPEYAQELHQWFSEGTYALSGQYRGLEGKPFEMFALVFADDNDSEDAENSKWEPNEVKQDCLRRLSETGQPKEVVELCQRCERFFEIGVFYYPSLNPWTSPS-GKTVLIGDAAHAMPPFLGQGANQAIQDAFCLGQKLSELKSGEI--ATLKDAVKAYERQRKLPTSAIQLESRFLGILETAGG--GSGTLPSFVRDSFFFTTGKLGVAEKVFVTGATPTV 369          
BLAST of mRNA_P-littoralis_Contig194.36.1 vs. uniprot
Match: A0A8J5XJX9_DIALT (Uncharacterized protein n=1 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J5XJX9_DIALT)

HSP 1 Score: 276 bits (705), Expect = 4.440e-83
Identity = 188/453 (41.50%), Postives = 253/453 (55.85%), Query Frame = 1
Query:  301 LTMVATTPVVKRVAIIGAGVGGLTLANALSAGAMAVDEVQVFEKFDSNKPGIGGGVQINSGAVILARLGLGDAIRAGGNPVERILSRTIGGRVVLDLDVVKMVRSDPKR-KAMMVD-NGTPMLFTIMRDRLMQILTEGLPSGVVNTRREVVSVEESPSGATLR-FGDGSAQGPFDLVVGADGIKGAARKAVKAARGXXXXXXXXXXNGGDA--IYSGIRIQYGVASAGQRPEGSEREVHQWFGGDTYGLSATYQGVGDEKFEMVAAIYQDR----DRKEENAVWDQVEAKEACLQRLDERGFPDEMKASAEASDRFYELGVYYRNPLEGWVSRGEGQVVLLGDAAHAMPPNLGQGANQAIQDAYCLAERLADLNRGVAYDGSLVDALQDYERARKPDTALVLAKSVFVGAVETLGGAAGGGAAGEAFRDNFFFGMWKAGVAEQVFMDGAMPKV 1632
            L + A    + RV IIGAG  GL  A A+     A  E+ V +K D  +P +GGGVQ+NSGA +LARLGLG A++  G P+ R+ +RT+    +LDLD+   +R  P+  ++ +VD +G  +  T+MRD L  +L   LP+G +   RE+V    + SG  L  F DGS    FDL++GADGI+   R  +  ARG           GG A  +Y+G+RI++GVA AG RP  S+ E+HQWFG   Y L+ATY G+  EKF+ V  +  +     +R   NA W   + +E+ ++ L     P+ +   A   +R +ELG Y   P   W   G G  VL+GDAAHAMPP LGQG NQAIQDAYCLA  LA   RG     SL DAL  Y   R+  TA +   S  +G VET        +  E  RD+FF      G+A  VF+DGA+PKV
Sbjct:    6 LLLAAPAGRLGRVGIIGAGPAGLAQAIAIRRLVGADVELVVIDKSDQLRPALGGGVQLNSGAAVLARLGLGAAVKRVGQPISRVHARTVDHTTLLDLDLAGAIRQHPRAAESGIVDRDGDVLAVTMMRDALQAMLASALPAGTIALERELVGARAARSGRVLASFADGS-DDEFDLLIGADGIRSVLRGEL--ARGAL---------GGLAAPLYTGLRIRWGVAPAGLRPPNSQAELHQWFGPGAYCLTATYGGLAGEKFDQVVLVRAEPGTEGERSGVNAGWSTSDVRESMVRDLTAAAMPEHVLELARRCERCFELGSYQHVPFTPWSGLG-GAAVLVGDAAHAMPPFLGQGTNQAIQDAYCLALHLAAYQRGQV--PSLADALGAYAAERQLPTARLALNSRVLGFVET--------SLPELARDSFFRFTSATGIARTVFLDGAIPKV 435          
BLAST of mRNA_P-littoralis_Contig194.36.1 vs. uniprot
Match: A0A7S0RGR4_9CHLO (Hypothetical protein n=1 Tax=Pyramimonas obovata TaxID=1411642 RepID=A0A7S0RGR4_9CHLO)

HSP 1 Score: 276 bits (707), Expect = 5.140e-83
Identity = 172/446 (38.57%), Postives = 245/446 (54.93%), Query Frame = 1
Query:  301 LTMVATTPVVKRVAIIGAGVGGLTLANALSA--GAMAVDEVQVFEKFDSNKPGIGGGVQINSGAVILARLGLGDAIRAGGNPVERILSRTIGGRVVLDLDVVKMVRSDPKRKAMMVDNGTPMLFTIMRDRLMQILTEGLPSGVVNTRREVVSVEESPSGATLRFGDGSAQGPFDLVVGADGIKGAARKAVKAARGXXXXXXXXXXNGGDAIYSGIRIQYGVASAGQRPEGSEREVHQWFGGDTYGLSATYQGVGDEKFEMVAAIYQDRDRKEENAVWDQVEAKEACLQRLDERGFPDEMKASAEASDRFYELGVYYRNPLEGWVSRGEGQVVLLGDAAHAMPPNLGQGANQAIQDAYCLAERLADLNRGVAYDGSLVDALQDYERARKPDTALVLAKSVFVGAVETLGGAAGGGAAGEAFRDNFFFGMWKAGVAEQVFMDGAMPKV 1632
            L + A+    KRVA++G G  GLT A ALS        + +QVFE++ S KP +G G  IN GA IL +LGL   ++  GNP++R+L+RT+ G  + D+++ K++    K       NG P+ +T+MR  L  +L   LP G+V T  +V+ V E+  G  LR  DGS    FDLVVG DGI+   R AV  +                 +YSGIRI + VA  G  P+    EVHQWFG   Y L+ +  G G+   +M+A    D  +  EN  W +   +E C   L     P+E+     AS+R +++GV+Y N L  W +  +  +VLLGD+AHAMPP +GQGANQAIQDAYCLAE+L  +  G  Y+ S+ +A+  YE+ R+  TA ++  S   G +ET GG       G   RD  F  +   G+  Q+F+  A+P+V
Sbjct:   47 LRVSASAAPPKRVAVVGGGPAGLTFALALSKLNNGAGAENIQVFEQYGSLKPTLGAGFNINGGAAILCKLGLDKELKEIGNPMQRVLARTVTGDPLFDVNIPKILPDSLKF------NGDPVAYTVMRSDLQAVLESKLPEGMVRTSAQVIDVFETGMGVRLRLADGSTSDEFDLVVGCDGIRSLIRAAVTNSTAPVAAP----------VYSGIRILFAVAPLGTYPKADPGEVHQWFGDGAYALAYS-GGKGERGRDMLALCVADGSKVAENEAWAEGSGREQCTAMLQAAAMPEELVDLVGASERIFDIGVHYHNTLPRWTNGSK--LVLLGDSAHAMPPFMGQGANQAIQDAYCLAEKLGQV--GGEYE-SMEEAIVAYEKVRQVPTAAIMQISRLNGWIETQGGI------GATLRDLLFKVLGVLGIPAQIFLQNAVPRV 464          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig194.36.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LRC6_ECTSI7.040e-25877.62Monooxygenase n=1 Tax=Ectocarpus siliculosus TaxID... [more]
A0A6H5KSV7_9PHAE4.300e-18685.31FAD_binding_3 domain-containing protein n=1 Tax=Ec... [more]
A0A836CJN1_9STRA9.120e-12150.68Monooxygenase n=1 Tax=Tribonema minus TaxID=303371... [more]
R1CJR6_EMIHU1.750e-10045.97Hypothetical protein n=1 Tax=Emiliania huxleyi Tax... [more]
A0A7S1UMX4_9STRA8.450e-10044.47Hypothetical protein n=1 Tax=Phaeomonas parva TaxI... [more]
A0A7S2RL63_9STRA2.810e-9443.45Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A812I7S9_9DINO1.970e-8643.44PrhF protein n=1 Tax=Symbiodinium natans TaxID=878... [more]
A0A7S2XFF1_9EUKA2.850e-8542.71Hypothetical protein n=1 Tax=Lotharella oceanica T... [more]
A0A8J5XJX9_DIALT4.440e-8341.50Uncharacterized protein n=1 Tax=Diacronema lutheri... [more]
A0A7S0RGR4_9CHLO5.140e-8338.57Hypothetical protein n=1 Tax=Pyramimonas obovata T... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig194contigP-littoralis_Contig194:116365..123423 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Pylaiella littoralis U1_48 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog2880.D8LRC6
PFAMsFAD_binding_3
Model size1779
Max annot lvl2759|Eukaryota
KEGG rclassRC00389
KEGG koko:K00480
KEGG ReactionR00818,R05632,R06915,R06936,R06939
KEGG Pathwayko00621,ko00624,ko00626,ko01100,ko01120,ko01220,map00621,map00624,map00626,map01100,map01120,map01220
Hectar predicted targeting categorysignal peptide
Exons7
Evalue5.66e-260
EggNOG OGsCOG0654@1|root,KOG2614@2759|Eukaryota
Ec32 ortholog descriptionMonooxygenase
Ec32 orthologEc-06_003030.1
EC1.14.13.1
DescriptionFAD binding
Cds size1596
COG categoryCH
BRITEko00000,ko00001,ko01000
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig194.36.1prot_P-littoralis_Contig194.36.1Pylaiella littoralis U1_48polypeptideP-littoralis_Contig194 116404..123279 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789932.91781-UTR-P-littoralis_Contig194:116364..1164031680789932.91781-UTR-P-littoralis_Contig194:116364..116403Pylaiella littoralis U1_48UTRP-littoralis_Contig194 116365..116403 +
1680789933.0084262-UTR-P-littoralis_Contig194:123279..1234231680789933.0084262-UTR-P-littoralis_Contig194:123279..123423Pylaiella littoralis U1_48UTRP-littoralis_Contig194 123280..123423 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789932.9313242-CDS-P-littoralis_Contig194:116403..1168891680789932.9313242-CDS-P-littoralis_Contig194:116403..116889Pylaiella littoralis U1_48CDSP-littoralis_Contig194 116404..116889 +
1680789932.9419186-CDS-P-littoralis_Contig194:117972..1181071680789932.9419186-CDS-P-littoralis_Contig194:117972..118107Pylaiella littoralis U1_48CDSP-littoralis_Contig194 117973..118107 +
1680789932.956075-CDS-P-littoralis_Contig194:118681..1190041680789932.956075-CDS-P-littoralis_Contig194:118681..119004Pylaiella littoralis U1_48CDSP-littoralis_Contig194 118682..119004 +
1680789932.9673173-CDS-P-littoralis_Contig194:119432..1195521680789932.9673173-CDS-P-littoralis_Contig194:119432..119552Pylaiella littoralis U1_48CDSP-littoralis_Contig194 119433..119552 +
1680789932.9766705-CDS-P-littoralis_Contig194:121768..1219221680789932.9766705-CDS-P-littoralis_Contig194:121768..121922Pylaiella littoralis U1_48CDSP-littoralis_Contig194 121769..121922 +
1680789932.9880183-CDS-P-littoralis_Contig194:122363..1224621680789932.9880183-CDS-P-littoralis_Contig194:122363..122462Pylaiella littoralis U1_48CDSP-littoralis_Contig194 122364..122462 +
1680789932.9990573-CDS-P-littoralis_Contig194:123000..1232791680789932.9990573-CDS-P-littoralis_Contig194:123000..123279Pylaiella littoralis U1_48CDSP-littoralis_Contig194 123001..123279 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-littoralis_Contig194.36.1

>prot_P-littoralis_Contig194.36.1 ID=prot_P-littoralis_Contig194.36.1|Name=mRNA_P-littoralis_Contig194.36.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=532bp
MSCVTVPLQYHRQLCEMESMLALRAAIAAVVAVAACFPVARGFSVPSLGH
THPSGAGLTSRNPSLETHRVDSYRPPSFRRGTPPPPPLTMVATTPVVKRV
AIIGAGVGGLTLANALSAGAMAVDEVQVFEKFDSNKPGIGGGVQINSGAV
ILARLGLGDAIRAGGNPVERILSRTIGGRVVLDLDVVKMVRSDPKRKAMM
VDNGTPMLFTIMRDRLMQILTEGLPSGVVNTRREVVSVEESPSGATLRFG
DGSAQGPFDLVVGADGIKGAARKAVKAARGRGGGGGGGGANGGDAIYSGI
RIQYGVASAGQRPEGSEREVHQWFGGDTYGLSATYQGVGDEKFEMVAAIY
QDRDRKEENAVWDQVEAKEACLQRLDERGFPDEMKASAEASDRFYELGVY
YRNPLEGWVSRGEGQVVLLGDAAHAMPPNLGQGANQAIQDAYCLAERLAD
LNRGVAYDGSLVDALQDYERARKPDTALVLAKSVFVGAVETLGGAAGGGA
AGEAFRDNFFFGMWKAGVAEQVFMDGAMPKV*
back to top

mRNA from alignment at P-littoralis_Contig194:116365..123423+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-littoralis_Contig194.36.1 ID=mRNA_P-littoralis_Contig194.36.1|Name=mRNA_P-littoralis_Contig194.36.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=7059bp|location=Sequence derived from alignment at P-littoralis_Contig194:116365..123423+ (Pylaiella littoralis U1_48)
GGGTGATGTATCATACGGCGGCCCCCTCTACATTCTGTGATGTCATGTGT CACTGTGCCTCTCCAATACCACAGGCAATTGTGTGAGATGGAGAGCATGC TAGCGTTGAGAGCTGCAATAGCAGCAGTAGTGGCGGTGGCAGCGTGCTTC CCCGTTGCTAGAGGCTTCTCCGTCCCGAGTTTGGGCCACACACATCCTTC AGGTGCTGGATTGACATCTCGCAACCCATCTCTCGAAACCCACCGCGTTG ATTCCTACCGGCCGCCGTCGTTTCGACGCGGCACTCCTCCGCCTCCCCCG CTGACAATGGTGGCGACCACGCCTGTTGTGAAGCGTGTCGCAATTATTGG GGCAGGGGTAGGGGGGCTGACGCTCGCCAATGCTCTAAGTGCGGGTGCCA TGGCCGTGGACGAGGTGCAGGTTTTTGAAAAGTTTGACTCGAACAAGCCT GGGATAGGCGGCGGTGTTCAGATCAACAGCGGAGCGGTGATATTGGCGCG GCTTGGGCTTGGAGATGCCATCAGGGTAAGGTACTACTTCGAAGTACTTA CCGTATTATCCTTGTTGTGCACAACTTTGCCGTTCGTACCCGTGCCGAGT CACGTTGGAACAGGGACCCCAGTTGAAGTACCAAAAATGTTCATGCAACT GAAAAAAAGACTCGTGCCGATGAATCCAACAAGCTGTCTCATGTCGGTCT GCGGTCTGCTAGTCTTGTACAGTACGCACTCCTGCCCTTCGTCGGAGTAC GTACTCTACAGCTGTAGAAACGTTGTACCGCTTCGAACTGAGAAAGTGCT GTGCGTTGTAAGTGTGGCACTACACTCCCGCGGAGATGATGTTTTGGGGT AACTGGTAAACCATTTATTTTGATTTGGGCTAAGGCAAATATGTGTATTG CACCTTGTGCCCTTGATTACTTCGTAGATCCTAGTCTAGAGAGACGGAAG ATATATTTGTACTGCTGTCTGTTGCATCTGAGATCTCTGTGCAGAAAAAA AAAAATGCCGTGAAATGCAAAAGCCACCGCCGATGTTCAAGAACGTGGGT GTCGGGGTGCTCTGTCTGGGACGACCAAAACAACAACTGCTGTTGCTTGA AGTTAGGGTACTGGTTCAGCTATACACACCTGAGCGTAAAAATCGTCCTT TTTTAAGTTAAGGGTACTGGTTCAGCCACATACACCTGAGCACAAAATCG TGGCTATCATCGGCGGTGCTCGACACACACGTGACGCATACATGCATACC GGTGTCAAGGTGCTGCCTGCATGTCTTGCGAGTGCGCGATGCTTTTGGCA GACAGCGGTGAGTTGCAGACTGTCGGTTACAAGGCGGCTCGGCCAGGCAG GATGTGGACCTCCGTTTTTTTCACCTACTACTGCTGTATCAAATGACAGA TCTGTATCACATGTATCAACACTTTCGACGTGCCCCGAGTGCATCTGACA CGCAGCGCGAATTCCTCTAGCCTGACTGTACACGTTGACCGCAGCCCGAC GATAATACATACGACAATGCACACGCGCACACCTCCCTTGCACTTTCAGG AATCGCTCCCTTTCACACCAACGACGCCGTCCGTTTTTTTTTTTTCTCTG TATGATAGGCTGGTGGCAACCCGGTGGAGCGCATCCTCAGTCGAACCATC GGGGGTCGTGTTGTTCTTGACCTAGACGTGGTCAAGATGGTTCGGTCGGA TCCCAAGAGGAAGGCGATGATGGTCGATAACGGCACGCCGATGGTGCGTA ATTGGTAGATCCGTTAAGACCGGAGCGAAAGTGGAGCACTGTTTTTGTTA ACTGGTGACGTCACATTACCGAAGTGCGAAAGGAGTGCGGCGGCGCCACC AGTGCTTTATCGTACGATAGCAAGAAGCATCATAGTTTACAAGAAAAACG TTGGCACGTGGTTTTTCCTATCGCAGCTCGAGAGGCGATCAGGTTCTGAC ACGTTGTCTATGACAGCATCCTTGTTATTCAAAATAGTAAGCTCGTAGTC TCACATGATACCTCCTTTTTTTTTCCAAAATTTTGACGGGCGAATGATGC TCTGATCCATTACCCCGGTCTCCTCTCCGAGCGTGACGTAGACAGAGAGC ATTACTTGCCCCCGCCCCCGCTCATTACCCTACAGCAAAACTAAGCACGA TTGGGCGACCCCCCACGCGCCGGCCATACCGCGCCCAACATGACGTATTT CACACAACGAACAACCACCACCAACTACTCATCTCATGGCTGCAGTCAAC ACACGTAACCCCCCCCCCCCCCGCGCGCGCCTCCCACCTTCTACTCCAAC CCCCACCGTCGCGCCAGCTTTTCACTATCATGCGCGACCGCCTGATGCAG ATTCTAACAGAAGGGCTACCCTCCGGCGTGGTGAACACGAGGCGCGAGGT CGTCTCGGTGGAGGAATCGCCATCGGGGGCCACGTTACGCTTCGGGGACG GTTCGGCGCAAGGGCCTTTTGATCTCGTCGTCGGGGCGGACGGCATCAAG GGGGCCGCGCGCAAGGCGGTGAAGGCTGCGCGGGGCCGAGGCGGGGGAGG GGGCGGCGGTGGCGCAAACGGCGGCGACGCCATCTACTCTGGGATTAGGA TCCAGTACGGGGTGGCATCGGCGGGGCAGCGGCCGGAAGGGTGAGGAAAA GGGCCGTTTGATTATCTGATCGCCTGCGGTATTTCGACAGGATGGTGGTG GTGGTGGTGGTGGTGTACACGCAGCAGTGCGAAGCGGAAGACGCGATAAC TGAATAAGACTGCCTCGGACACACGAATGGCTGTTGGGGCACTCTCTTGT TTTATTCCGACCGCGTGGAGGAAATTCTCGCTCTGCCTCAGTCTGTGCGT CTGCTGTACATACACATAGTAGTAGCGCTAGGCCCCTCTCAGACGACCCC CTACCTTAGATATCGTAGGAAACCATGTCTCCGTCTTTGTTCCAGTCAAA CTCGGCGACCCCCCCCCCCGAATTCCCCTCGAAGCATGCATCACACAAAT GTAATATTTTGTTTTTCACCCTTCGGTCACGCCGCTCAAGCATGATGACA CGGTGCCATGAATTCCAGGTCCGAGAGAGAGGTGCACCAGTGGTTCGGGG GCGACACGTACGGGCTGAGCGCCACGTACCAAGGGGTCGGGGACGAGAAG TTCGAGATGGTGGCAGCCATCTACCAGGACCGCGACAGGTGGCTTTTTTT TCGTCTTTTCAGACGTGCGGCAGCGTATTTCTCGCAAGCAAGTGGCGTAT CGCTGACACATCGCGGCGGTCGATTTTATTTTTATTTTTACTTTCCAACA TTCCTTCTACACAAAGCGCTTGATCAACTCGTTGCAGAAGGATTGATCGT TTTGTGGTCGTACAGAGTGAAGAGACGCTGACAGGTGAAATTTATTCGAG GTACAAAATATATTATTACGGGTGGTCTTGCGTTTGCGGAGAAGGCCCAG AAACCAACATCTAGAGCGCACAGCAGTCTTGCATCCTCTGTGATGACACT TGAGACGGATCAGATTGGGTACAAGAGCTGTAGGTATCGTGCACTTCCCG CGCCTTCCTCTTCGCACCAACGGCGCCGCTGCATACAGCGCTGCGACCTC GCGTTGCTTGGTGAAGCACCAACTTCATCGTCGTCTCCTATTGTACGTAC GTACAGTTAGAGGTGTCAATCGTGATTTTTTTGTATAGGATTTTTTTTCC AAAAGTGTCCGGATCTTGCTGGATGGAATATCTACCGAGCCAGCCAAAAT TCGAGAATCGGTCCTCAGTTTCCATCGACGAGCAACGTACGCTCTGTCGA ACGATTGTAGCCACGGACAGCATATCATACCACACGACACGGCTAGCGCT AGAGGTCCCCTTGTGCCTCATCAATACATGCGACGAGCCTACCGCCAGTT GGGTATGACGAGCATGCCCGACGAGTGTCGGTTGTATCGGTGCATGATGG TACCACACCACGGCGTTTGGGCTGCTGTTACTCAACTGGTCCTGCTGTAC ACAGGAGATGAATTTTCTGGACGAACAAAATACACAAGCCTTTTTTTGCT GTCTTTCGACGACGCTGCTCTCTTGCTTCACAACAACCGCTTGCTTCACC ACCTGCTTCTTTGATAGACTGACTGATGACATACAGAGCTCAACCACTGC TGGCTCGGGGTTTCGGCCGTGTGTGCTGGCGCAATGGTAGCGTACGTTTT GTTCTCTGTGTTGCAGCAGCAGCAGAAACGATTGGTGAAACCACAGCAAC AAATATTGTAAGGAAATTGTTGAGGTTGGATTTTTACACCGCTGTAAAAT ATACTGCTTCTAAAAGACTACGTGTTTGTGGATACTGTTGTAGCTTCCAC TCGTTTTCACAGCTTCCACACCACTCCTCTCTCAGCAGTCGCGCTGTTTG CTGCAGCTACAAGGTTGTAGCAATACTCACAGACTGCTGTGGACCGTGCC CAACATGCTCAGCAGGCGCCGCGTGAAGTAGCCTCATGACAAGGCCATCC AACACTCTCATATCATATGTGCGCGCTCGTGTTGTGCTTCATTCGAAAAA AACGACAAAAATATCGGAATTTTTCTGATTTTTTATGTCCCCCCGTCAGG GCATTTTCGTAGTTTTGAGGCAAGTAGGTCATTTCTCTCGAGGCAGAACT CCTAGGCTATTAAGTGGATTGGAGTGCTGTTTGTTGTGCTGTGTGCTCCT AGTCTCAGTGCCGATAGGTGCAAACTCGCTTTTTCGATTTCGGAGTTAGC TCCGCTTGCAAGAGAGAAATAGAGGCAAAATAGGTGGTTTTTGGAACTTT AATCGCCCTCTCTGCAGCTGTCTGTGCAACACCTATAAGCAGGGGTGATT AACGTATGAACAGCCAAGGAGCGGTAGTGACAGAGTTCCGCTCGATCTAT GAACAAGAATCTGTGTGTTCCTGGTAGTCTAAACTTCAGTAGTTTGTTTG GCGTTGTCGTTTTTATTATGTTTTTTTTTTGTTTTTGAACCGAAAATTGC CGAACAGTTATTACACCTTTTCGACGCGCATGCAAGGCACAAATGACACC TCTAACAGAAGTCAAATCTAAAAACACACACATCCTTTGGGCCGACTCCT GAGCTCGAGATGCCTCCACACCAAAACGCTGGCACTCTCCCTGCTGTGCC ACGAGAATGTTGGGCTTTATTCAGCCGCCCCAGGCTTTATATGTTTTCTC TACATGCATGTCAATCAGAAAAGGGTTGTTGCGCGAGGCAAGGGTTCTAT CCAGCGAGTCCATGCCCTTCCCATTGGCTGGCTCACGAACCCCTTCCGCG AAAAGCGAGAGCTAGACCAACATCGCTGTTTTTTTTTTGCTCTGGGTGTA TGTGTGTGTGCTTTTTCTACGCTCGTCGGCTGGCCGGCCGATTACGGTTC ACAGAAAAGAAGAGAACGCTGTGTGGGATCAAGTGGAGGCCAAGGAGGCG TGCCTTCAGAGGCTGGACGAGCGGGGGTTTCCTGACGAGATGAAGGCGTC GGCGGAGGCGAGCGATCGATTCTACGAGCTCGGCGTGTACTACAGGAACC CGCTAGAGGTATGTACGTTCCGTCGCACATTGACGAAGTGACTCCGTCGG AATGAGAGTGCTGGTTAAAATGGCGTGGTGGAGCTGCGTCGGGCTTTTTT CTTTGGAAGTTGCGTTGTCAACAGGCGACTCGTGTGGGTTACAACAGGGT ACGATATACGTTGACTCATGTGGGTTACAACAGGATACGATATACGTTGG TTTAGTGTTCACTGCTGTTTTGCTTCGTGGCTATGATTGTGTGAGAACAA TAACGTAAGATGCCGACACAGCTGCGCTTCATTCCATAAAACCTGAACCG TTACTCGTCGATGCGAAGGCGGTTGGTGCCGGTGGAGCCCCGTGCGTCGT CAGCAATGAAGTTTCGACACATGTGTTGCTTATCATCACGAACCACTTTT GAAACTTGCTACTTGCCAACTTTCCCCTCCCCCCTCCCACTTCCTCAAGG GTTGGGTGAGTCGCGGGGAAGGGCAAGTGGTGCTTCTGGGAGACGCCGCG CACGCGATGCCGCCAAACCTTGGCCAAGGGGCTAACCAAGCAATCCAGGT ATAAAGGAGTTACAGTATACAGCAGTATCGCGGAGCAAAAAAATTGTGTC GGAACGAAGGAACCTTGCAATCTCAGGAGATTCCCATTGACAAAACCAGC GAGACAACACAGACGTGGATGAAGAAGCCTGGCCTTCCAAATGACTCAAC AATCGAAAGAACACGACATGGGGCGGTTCTTGACCACCTCCCGCGCGAGA GAGAACACGAACGGTACCCAAACAAAGTCAAGCTGAATCGAAAGGGGGTA CACGTGGCGGCGGGCGCGTCTCTCCATGGCGACTGACTCTTCCTCGACCT GTTTTTGTTTTTCACCCCGACCGATCTTTTTTTCCCGTCTTTTTTTTTTT TTTTACCCGGAGCACGCCGTGCGTGCGTGTACCACCAGCAATTCCACACT TGCACGGCACGGCACCTAGACACACACGCACACACACAAACCTGCTGATA AAAAACCACCACGACTGTTCTCTTGCCGCCCGCCGTCATAATAACAACAA CAACAACGCGGCCCCGCGGTTGAACACGAAAAAAAGGACGCGTACTGCCT GGCGGAGCGCTTGGCCGACCTCAATCGCGGTGTCGCTTACGACGGTAGCC TCGTCGACGCCCTGCAAGACTACGAGCGGGCGCGCAAACCGGACACGGCC TTGGTGCTTGCAAAGAGCGTTTTCGTGGGGGCGGTGGAAACCCTTGGAGG CGCAGCGGGGGGCGGGGCTGCGGGCGAGGCGTTCCGAGACAATTTTTTCT TCGGCATGTGGAAGGCCGGTGTGGCGGAGCAGGTTTTCATGGACGGTGCA ATGCCGAAGGTTTAGATTTGTAGTGTAGTGAAATATCATATGGCTCGTTC ATTGTAGGGGGATTTTCTGCGTGGGTATCTTGTATATTTGCCATATTCTG TAGGAGTGATGGTGTGTTTTACAGTCTATACGGGTGTACGTGCGGCGTTG AAAGGGAAG
back to top

Coding sequence (CDS) from alignment at P-littoralis_Contig194:116365..123423+

>mRNA_P-littoralis_Contig194.36.1 ID=mRNA_P-littoralis_Contig194.36.1|Name=mRNA_P-littoralis_Contig194.36.1|organism=Pylaiella littoralis U1_48|type=CDS|length=1596bp|location=Sequence derived from alignment at P-littoralis_Contig194:116365..123423+ (Pylaiella littoralis U1_48)
ATGTCATGTGTCACTGTGCCTCTCCAATACCACAGGCAATTGTGTGAGAT
GGAGAGCATGCTAGCGTTGAGAGCTGCAATAGCAGCAGTAGTGGCGGTGG
CAGCGTGCTTCCCCGTTGCTAGAGGCTTCTCCGTCCCGAGTTTGGGCCAC
ACACATCCTTCAGGTGCTGGATTGACATCTCGCAACCCATCTCTCGAAAC
CCACCGCGTTGATTCCTACCGGCCGCCGTCGTTTCGACGCGGCACTCCTC
CGCCTCCCCCGCTGACAATGGTGGCGACCACGCCTGTTGTGAAGCGTGTC
GCAATTATTGGGGCAGGGGTAGGGGGGCTGACGCTCGCCAATGCTCTAAG
TGCGGGTGCCATGGCCGTGGACGAGGTGCAGGTTTTTGAAAAGTTTGACT
CGAACAAGCCTGGGATAGGCGGCGGTGTTCAGATCAACAGCGGAGCGGTG
ATATTGGCGCGGCTTGGGCTTGGAGATGCCATCAGGGCTGGTGGCAACCC
GGTGGAGCGCATCCTCAGTCGAACCATCGGGGGTCGTGTTGTTCTTGACC
TAGACGTGGTCAAGATGGTTCGGTCGGATCCCAAGAGGAAGGCGATGATG
GTCGATAACGGCACGCCGATGCTTTTCACTATCATGCGCGACCGCCTGAT
GCAGATTCTAACAGAAGGGCTACCCTCCGGCGTGGTGAACACGAGGCGCG
AGGTCGTCTCGGTGGAGGAATCGCCATCGGGGGCCACGTTACGCTTCGGG
GACGGTTCGGCGCAAGGGCCTTTTGATCTCGTCGTCGGGGCGGACGGCAT
CAAGGGGGCCGCGCGCAAGGCGGTGAAGGCTGCGCGGGGCCGAGGCGGGG
GAGGGGGCGGCGGTGGCGCAAACGGCGGCGACGCCATCTACTCTGGGATT
AGGATCCAGTACGGGGTGGCATCGGCGGGGCAGCGGCCGGAAGGGTCCGA
GAGAGAGGTGCACCAGTGGTTCGGGGGCGACACGTACGGGCTGAGCGCCA
CGTACCAAGGGGTCGGGGACGAGAAGTTCGAGATGGTGGCAGCCATCTAC
CAGGACCGCGACAGAAAAGAAGAGAACGCTGTGTGGGATCAAGTGGAGGC
CAAGGAGGCGTGCCTTCAGAGGCTGGACGAGCGGGGGTTTCCTGACGAGA
TGAAGGCGTCGGCGGAGGCGAGCGATCGATTCTACGAGCTCGGCGTGTAC
TACAGGAACCCGCTAGAGGGTTGGGTGAGTCGCGGGGAAGGGCAAGTGGT
GCTTCTGGGAGACGCCGCGCACGCGATGCCGCCAAACCTTGGCCAAGGGG
CTAACCAAGCAATCCAGGACGCGTACTGCCTGGCGGAGCGCTTGGCCGAC
CTCAATCGCGGTGTCGCTTACGACGGTAGCCTCGTCGACGCCCTGCAAGA
CTACGAGCGGGCGCGCAAACCGGACACGGCCTTGGTGCTTGCAAAGAGCG
TTTTCGTGGGGGCGGTGGAAACCCTTGGAGGCGCAGCGGGGGGCGGGGCT
GCGGGCGAGGCGTTCCGAGACAATTTTTTCTTCGGCATGTGGAAGGCCGG
TGTGGCGGAGCAGGTTTTCATGGACGGTGCAATGCCGAAGGTTTAG
back to top