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Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Stop | 1 |
| Start | 1 |
| Model size | 1398 |
| Hectar predicted targeting category | other localisation |
| Exons | 2 |
| Cds size | 1164 |
Relationships
The following UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1680789931.3935978-UTR-P-littoralis_Contig194:274418..274641 | 1680789931.3935978-UTR-P-littoralis_Contig194:274418..274641 | Pylaiella littoralis U1_48 | UTR | P-littoralis_Contig194 274419..274641 - |
| 1680789931.4239817-UTR-P-littoralis_Contig194:275986..275997 | 1680789931.4239817-UTR-P-littoralis_Contig194:275986..275997 | Pylaiella littoralis U1_48 | UTR | P-littoralis_Contig194 275987..275997 - |
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1680789931.404288-CDS-P-littoralis_Contig194:274641..275521 | 1680789931.404288-CDS-P-littoralis_Contig194:274641..275521 | Pylaiella littoralis U1_48 | CDS | P-littoralis_Contig194 274642..275521 - |
| 1680789931.4136448-CDS-P-littoralis_Contig194:275702..275986 | 1680789931.4136448-CDS-P-littoralis_Contig194:275702..275986 | Pylaiella littoralis U1_48 | CDS | P-littoralis_Contig194 275703..275986 - |
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig194.98.4 >prot_P-littoralis_Contig194.98.4 ID=prot_P-littoralis_Contig194.98.4|Name=mRNA_P-littoralis_Contig194.98.4|organism=Pylaiella littoralis U1_48|type=polypeptide|length=388bp
MVGGSNSYPSGEGLLGVPAPGIGRGVPMSLAFWHLVGGCADGRAGGGGGI
GAVASAVEKDTQHEQRARATELLQQQQQQQHGSLRSGVDPYKTKKRAPAY
TVAEPSSGSTLPRAMAVKEDGNAAAAAASAASAGGGSGEQRASINKAWEL
WRKEEAMPPMPVHRKSSRINEFTLLKGKGGGGGGGGGGEGGVVSPSGSFS
PLVIVSTEGILEGEGGAGVPAAASGAPERAGGATAAAAPAATAPAAAAAA
TSAAVATAAAAAAATLNVVPRKAAFAGNKRRENGASGRSTGRSTGQAAAL
SGPVYASASAAAAAVAAEPPAEEALKPLRVNIKTPGEASPRPAEAVETAG
PAEAANISAPADREKLGEGIDDDAGIAALEVRVWHRR* back to topmRNA from alignment at P-littoralis_Contig194:274419..275997- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_P-littoralis_Contig194.98.4 ID=mRNA_P-littoralis_Contig194.98.4|Name=mRNA_P-littoralis_Contig194.98.4|organism=Pylaiella littoralis U1_48|type=mRNA|length=1579bp|location=Sequence derived from alignment at P-littoralis_Contig194:274419..275997- (Pylaiella littoralis U1_48)
GGGGAGGTGGAATGGTGGGGGGCAGCAACTCGTATCCGTCTGGAGAGGGT
TTGCTCGGGGTCCCTGCACCGGGAATCGGTCGGGGTGTCCCGATGTCGTT
GGCGTTTTGGCACCTGGTTGGGGGGTGCGCCGACGGAAGAGCAGGAGGAG
GAGGAGGTATAGGGGCTGTGGCTTCGGCGGTAGAGAAGGATACGCAGCAT
GAACAACGCGCGAGAGCGACCGAGCTGTTGCAGCAGCAGCAGCAGCAGCA
GCATGGTTCCCTGCGCAGCGGCGTCGATCCCTACAAAACAAAAAAGTGAG
TTGTTGTTTTTTCCTTTTTCATCGTATTCTTCCTATGTAAATGATTTGGA
TGTGGCCGGCAGGTGCGCACAGCAGTGTATACACATCGTACGCCAGCGTA
TTTCGTGATTTCGCCGATTCAAGCCCCCTCCGCTCTTGTGGCTCCGTTCT
GCCTGCGCTTACAACTTCAAAAATAGGCGCGCCCCGGCATATACGGTAGC
AGAACCCTCCTCGGGCTCTACCCTGCCTCGAGCCATGGCGGTGAAGGAGG
ATGGCAATGCTGCTGCCGCGGCTGCCTCTGCCGCCTCTGCCGGCGGCGGG
TCTGGAGAACAGCGCGCGTCCATCAACAAAGCTTGGGAGCTATGGCGCAA
GGAAGAGGCGATGCCTCCGATGCCAGTCCACAGGAAGAGCTCGCGGATCA
ACGAGTTCACCCTGCTCAAAGGCAAGGGTGGCGGCGGAGGCGGTGGCGGT
GGGGGTGAGGGTGGCGTCGTCAGCCCGTCTGGAAGCTTCTCTCCCCTCGT
GATCGTGTCCACCGAGGGGATTCTTGAGGGAGAAGGTGGCGCTGGTGTGC
CGGCGGCGGCCAGTGGCGCTCCTGAAAGGGCAGGTGGTGCCACCGCTGCT
GCTGCTCCTGCTGCTACTGCTCCTGCTGCGGCTGCTGCTGCTACTTCTGC
GGCCGTTGCCACTGCTGCTGCTGCTGCTGCTGCGACTCTCAACGTTGTTC
CCCGAAAAGCCGCTTTCGCTGGTAATAAACGCAGAGAAAATGGAGCAAGT
GGCCGCTCCACCGGCCGCTCCACCGGCCAAGCGGCGGCTCTCTCCGGCCC
GGTGTACGCTAGCGCTTCGGCTGCGGCGGCAGCGGTAGCGGCGGAACCGC
CAGCCGAGGAGGCACTGAAACCCCTGAGGGTTAACATCAAAACACCTGGC
GAAGCATCGCCGAGGCCTGCGGAGGCGGTGGAGACAGCGGGGCCTGCGGA
GGCGGCAAATATTTCGGCTCCGGCTGACCGGGAGAAGCTTGGAGAGGGGA
TTGATGACGACGCCGGCATCGCTGCCCTTGAGGTGAGGGTCTGGCACAGG
AGATAGGGTTGTAAGAAGTTGAGCGTTATTGTTGTTGTTGGTGTCGGTGT
TGGTGTTGGTGATTGTTGGTGTTGTTGGTGTTGTTGGTGTTGTTGGTGTT
GATTCTCACACGAACTTCATCTCCAAAGTCTAGCCCGTGGTCAGAAACCA
GGCAGGCAAAAACTTGCCTCAGAAGAAAAGCCGACATTCAGCTCGCGAGA
TGTGGCGGTGTGGACGGGCAGTGGCTGGG back to topCoding sequence (CDS) from alignment at P-littoralis_Contig194:274419..275997- >mRNA_P-littoralis_Contig194.98.4 ID=mRNA_P-littoralis_Contig194.98.4|Name=mRNA_P-littoralis_Contig194.98.4|organism=Pylaiella littoralis U1_48|type=CDS|length=1164bp|location=Sequence derived from alignment at P-littoralis_Contig194:274419..275997- (Pylaiella littoralis U1_48)
ATGGTGGGGGGCAGCAACTCGTATCCGTCTGGAGAGGGTTTGCTCGGGGT
CCCTGCACCGGGAATCGGTCGGGGTGTCCCGATGTCGTTGGCGTTTTGGC
ACCTGGTTGGGGGGTGCGCCGACGGAAGAGCAGGAGGAGGAGGAGGTATA
GGGGCTGTGGCTTCGGCGGTAGAGAAGGATACGCAGCATGAACAACGCGC
GAGAGCGACCGAGCTGTTGCAGCAGCAGCAGCAGCAGCAGCATGGTTCCC
TGCGCAGCGGCGTCGATCCCTACAAAACAAAAAAGCGCGCCCCGGCATAT
ACGGTAGCAGAACCCTCCTCGGGCTCTACCCTGCCTCGAGCCATGGCGGT
GAAGGAGGATGGCAATGCTGCTGCCGCGGCTGCCTCTGCCGCCTCTGCCG
GCGGCGGGTCTGGAGAACAGCGCGCGTCCATCAACAAAGCTTGGGAGCTA
TGGCGCAAGGAAGAGGCGATGCCTCCGATGCCAGTCCACAGGAAGAGCTC
GCGGATCAACGAGTTCACCCTGCTCAAAGGCAAGGGTGGCGGCGGAGGCG
GTGGCGGTGGGGGTGAGGGTGGCGTCGTCAGCCCGTCTGGAAGCTTCTCT
CCCCTCGTGATCGTGTCCACCGAGGGGATTCTTGAGGGAGAAGGTGGCGC
TGGTGTGCCGGCGGCGGCCAGTGGCGCTCCTGAAAGGGCAGGTGGTGCCA
CCGCTGCTGCTGCTCCTGCTGCTACTGCTCCTGCTGCGGCTGCTGCTGCT
ACTTCTGCGGCCGTTGCCACTGCTGCTGCTGCTGCTGCTGCGACTCTCAA
CGTTGTTCCCCGAAAAGCCGCTTTCGCTGGTAATAAACGCAGAGAAAATG
GAGCAAGTGGCCGCTCCACCGGCCGCTCCACCGGCCAAGCGGCGGCTCTC
TCCGGCCCGGTGTACGCTAGCGCTTCGGCTGCGGCGGCAGCGGTAGCGGC
GGAACCGCCAGCCGAGGAGGCACTGAAACCCCTGAGGGTTAACATCAAAA
CACCTGGCGAAGCATCGCCGAGGCCTGCGGAGGCGGTGGAGACAGCGGGG
CCTGCGGAGGCGGCAAATATTTCGGCTCCGGCTGACCGGGAGAAGCTTGG
AGAGGGGATTGATGACGACGCCGGCATCGCTGCCCTTGAGGTGAGGGTCT
GGCACAGGAGATAG back to top
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