mRNA_P-littoralis_Contig193.107.1 (mRNA) Pylaiella littoralis U1_48

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-littoralis_Contig193.107.1
Unique NamemRNA_P-littoralis_Contig193.107.1
TypemRNA
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Homology
BLAST of mRNA_P-littoralis_Contig193.107.1 vs. uniprot
Match: A0A6H5L6B6_9PHAE (DDE Tnp4 domain-containing protein n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L6B6_9PHAE)

HSP 1 Score: 445 bits (1145), Expect = 2.110e-141
Identity = 212/343 (61.81%), Postives = 257/343 (74.93%), Query Frame = 1
Query: 2644 ILVDHLRPELERDTTMGALRNGAVPVEYQVGLTLRWLAGASMYEGMDGHVIARSTAYQTAFRVIKAINDCTELDCKWPATPEDVADKAAHFEKRCSVGSIRKCVGAMDGLFVRTIRPTTRDTAEPNSYYSGHKKGFGMNFQGICDAEYRIIAWTMNSPGCQNDRTAFKFSGFEQLLQDLPPDYFILGDAAYPASDRVLVPYPGTNLPTFHDAFNFWQSQGRISIEQTFGIMVRTWGILWRPMEFGLGRVVEVVGAVVRLHNFCRDRQVSVPTHNVGKITVPVEVTFNSHGLIDNDYFRPASTRPGRPHENQAALSKPREDIRQELEIRGFVRPAHNIARNKNR 3672
            +LVDHLRP L+++  MG LRNGA+PVE QV +TLRWLAG S+YE MDGHVIARSTAY     VI A+N C EL+CKWP   ED A  A  F  R S+  +RKCVGA DGLFVR I+P+ ++ AEPN YY+GHKKGFGMNFQ +CDA+YRI+AW MN PG QNDRTAF FSGF++LL  LP  +F++GDAAY AS+RV+VP+PGT+L    DA N++ SQ R++IEQT+GI+VR WGILWRPME  + +   VV AVVRLHNFCRDR+V VPT N G    P EV F+  GLI +DYF     R GRP ++QA  SKPRE IR+ELE+ G +RP HNIAR+  R
Sbjct:   72 VLVDHLRPALQKNQQMGLLRNGAIPVEDQVAMTLRWLAGGSIYECMDGHVIARSTAYHVTSTVINALNACPELNCKWPEG-EDAARAAELFRNRSSMDVVRKCVGATDGLFVRMIKPSAKEVAEPNLYYNGHKKGFGMNFQAVCDAQYRIMAWMMNCPGSQNDRTAFNFSGFDKLLAGLPEGHFVVGDAAYGASERVVVPFPGTSLSASQDACNYYVSQCRMAIEQTYGILVRRWGILWRPMEVRIEKFEHVVNAVVRLHNFCRDRKVDVPTENTGSAIPPPEVAFDDDGLISSDYFETVPVRTGRPVKDQAKASKPREAIRKELEVAGLMRPEHNIARSHKR 413          
BLAST of mRNA_P-littoralis_Contig193.107.1 vs. uniprot
Match: A0A6H5K3F2_9PHAE (DDE Tnp4 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K3F2_9PHAE)

HSP 1 Score: 424 bits (1090), Expect = 2.290e-133
Identity = 214/377 (56.76%), Postives = 263/377 (69.76%), Query Frame = 1
Query: 2533 RSTLLLRERRAWPLYIKPMLGDGTFKGRFRMHHVDFKILVDHLRPELERDTTMGALRNGAVPVEYQVGLTLRWLAGASMYEGMDGHVIARSTAYQTAFRVIKAINDCTELDCKWPATPEDVADKAAHFEKRCSVGSIRKCVGAMDGLFVRTIRPTTRDTAEPNSYYSGHKKGFGMNFQGICDAEYRIIAWTMNSPGCQNDRTAFKFSGFEQLLQDLPPDYFILGDAAYPASDRVLVPYPGTNLPTFHDAFNFWQSQGRISIEQTFGIMVRTWGILWRPMEFGLGRVVEVVGAVVRLHNFCRDRQVSVPTHNVGKITVPVEVTFNSHGLIDNDYFRPASTRPGRPHENQAALSKPREDIRQELEIRGFVRPAHNIARN 3663
            R   + RERR+W  Y KPM+ DGTF+ RFRM + +F +L D LRP+LER+  MGALRNG +PVE+Q+ + LR+LAG S++E MDG+VIARSTAY    RVI AIN   ELDC WP   ED  D+   + +R + G IR CVGAMDGLFVR  +P+ R    P S+YSGHKKGFGMNFQG+C+A Y IIAWTMN PG  NDRTAFK S F  +L+ LPP  +I+GDAAYPASD+VLVPYPGT+L    DA+NF+QSQ RISIEQ FGIMV+TWGILWRP++  L RV  V+ +VVRLHNF R R+  +P  +  ++T PVEV F   G ++  YF    TR  +    +A  S PRE IRQ LE     RP  N+ RN
Sbjct:   42 RDKFVRRERRSWYTYAKPMVQDGTFRLRFRMDYTEFALLADMLRPKLERNERMGALRNGVIPVEFQLAMALRFLAGGSVFEVMDGNVIARSTAYAIVHRVIDAINQTRELDCVWPEG-EDALDQCGMYRRRSTNGVIRMCVGAMDGLFVRMTQPSLRRHVNPRSFYSGHKKGFGMNFQGVCNARYEIIAWTMNCPGSCNDRTAFKHSVFGTVLKTLPPGAYIVGDAAYPASDQVLVPYPGTSLTRSQDAYNFYQSQARISIEQAFGIMVKTWGILWRPLDMRLERVSSVINSVVRLHNFLRRRRARIP-RSPWRVTQPVEVRFRPDGSLEGTYFDTVPTRGRQTRGGRA--SAPREAIRQYLEQYSIGRPRWNLQRN 414          
BLAST of mRNA_P-littoralis_Contig193.107.1 vs. uniprot
Match: A0A6H5JJA1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JJA1_9PHAE)

HSP 1 Score: 418 bits (1074), Expect = 2.290e-131
Identity = 212/384 (55.21%), Postives = 261/384 (67.97%), Query Frame = 1
Query: 2521 TVKHRSTLLLRERRAWPLYIKPMLGDGTFKGRFRMHHVDFKILVDHLRPELERDTTMGALRNGAVPVEYQVGLTLRWLAGASMYEGMDGHVIARSTAYQTAFRVIKAINDCTELDCKWPATPEDVADKAAHFEKRCSVGSIRKCVGAMDGLFVRTIRPTTRDTAEPNSYYSGHKKGFGMNFQGICDAEYRIIAWTMNSPGCQNDRTAFKFSGFEQLLQDLPPDYFILGDAAYPASDRVLVPYPGTNLPTFHDAFNFWQSQGRISIEQTFGIMVRTWGILWRPMEFGLGRVVEVVGAVVRLHNFCRDRQVSVPTHNVGKITVPVEVTFNSHGLIDNDYFRPASTRPGRPHENQAALSKPREDIRQELEIRGFVRPAHNIARNKNR 3672
            T ++RSTL+ RERR +  YIKPML D TF  RFRM + DF++LVDHLRP L+++   G LRNGA+PVEYQV +TLRWLAG S+YE MDGHVIARSTAY     VI A+N C EL+CKWP   ED+ +  +       +  +RKCVGAMDGLFVR I+P+ ++ AEPN YY+GHKKGFGMNFQ +C                QNDRTAF FSGF++LL  LP  +F++G+AAY AS+RV+VP+PGT+ P                 EQT+GI+VR WGILWRPME  + +   VV AVVRLHNFC DR+V VPT N G    P EV F+  GLI +DYF     R GRP ++QA  SKPRE IR+ELE+ G +RP HNIAR+  R
Sbjct:   42 TKRNRSTLVARERRPFETYIKPMLQDHTFSMRFRMEYDDFRVLVDHLRPALQQNEKTGLLRNGAIPVEYQVAMTLRWLAGGSIYEYMDGHVIARSTAYHVTSTVINALNACPELNCKWPEG-EDLPEPPSFSATAALMDVVRKCVGAMDGLFVRMIKPSAKEVAEPNLYYNGHKKGFGMNFQ-VCS---------------QNDRTAFNFSGFDKLLAGLPEGHFVVGNAAYGASERVVVPFPGTSPPX----------------EQTYGILVRRWGILWRPMEVRIEKFEHVVNAVVRLHNFCWDRKVDVPTENTGSAIPPPEVAFDDDGLISSDYFETVPVRTGRPVKDQAKASKPREAIRKELEVAGLMRPEHNIARSHKR 392          
BLAST of mRNA_P-littoralis_Contig193.107.1 vs. uniprot
Match: A0A6H5K6M2_9PHAE (DDE Tnp4 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K6M2_9PHAE)

HSP 1 Score: 416 bits (1070), Expect = 2.340e-130
Identity = 212/381 (55.64%), Postives = 265/381 (69.55%), Query Frame = 1
Query: 2530 HRSTLLLRERRAWPLYIKPMLGDGTFKGRFRMHHVDFKILVDHLRPELERDTTMGALRNGAVPVEYQVGLTLRWLAGASMYEGMDGHVIARSTAYQTAFRVIKAINDCTELDCKWPATPEDVADKAAHFEKRCSVGSIRKCVGAMDGLFVRTIRPTTRDTAEPNSYYSGHKKGFGMNFQGICDAEYRIIAWTMNSPGCQNDRTAFKFSGFEQLLQDLPPDYFILGDAAYPASDRVLVPYPGTNLPTFHDAFNFWQSQGRISIEQTFGIMVRTWGILWRPMEFGLGRVVEVVGAVVRLHNFCRDRQVSVPTHNVGKITVPVEVTFNSHGLIDNDYFRPASTRPGRPHENQAALSKPREDIRQELEIRGFVRPAHNIARNKNR 3672
            HR   + RERR++  Y++PM+ D TF+ RFRM + DF  L D LRP+L+RD  MGALRNGA+PVE+Q+ +TLR+LAG S++E MD +VIA+STAY    RVI AIN   +L+CKWP   +D   +A  + +R + G IR+CVGAMDGLFVR I P  +  A P S+YSGHKK FGMNFQGIC+A Y II WTMN PG QNDRTAFK SGF+ LL  +PPD FI+GDAAYPAS+RVLVP PGT L    DA+NF+QSQ RISIEQ FGI+V+TW ILW+P+   L RV  V+ A+VRLHNF R R+  V   +   + +P  VTF+  G ID  Y+    TR GRP +  A +  PRE IR  L+ +   RP  N+ RN NR
Sbjct:   45 HRGNFVYRERRSFYTYVRPMVEDNTFRKRFRMDYTDFMTLADILRPKLQRDEKMGALRNGAIPVEFQLAMTLRFLAGGSVFEVMDSNVIAKSTAYAIVHRVIDAINQTRQLNCKWPYG-DDAEAQAELYRRRSTNGVIRRCVGAMDGLFVRLIPPCLKRHAVPGSFYSGHKKAFGMNFQGICNASYEIITWTMNCPGSQNDRTAFKHSGFDALLSKMPPDCFIVGDAAYPASNRVLVPDPGTALTLSQDAYNFYQSQARISIEQAFGILVKTWEILWKPLAIRLDRVGHVMNAIVRLHNFLRRRRAPV-LQSAWNVPMPESVTFHPDGGIDGSYYDTVPTR-GRPSK-AAEVCMPREIIRDYLDQKSMGRPRFNLNRNVNR 421          
BLAST of mRNA_P-littoralis_Contig193.107.1 vs. uniprot
Match: A0A6H5KNF2_9PHAE (DDE Tnp4 domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KNF2_9PHAE)

HSP 1 Score: 327 bits (837), Expect = 2.810e-99
Identity = 151/247 (61.13%), Postives = 188/247 (76.11%), Query Frame = 1
Query: 2932 VGSIRKCVGAMDGLFVRTIRPTTRDTAEPNSYYSGHKKGFGMNFQGICDAEYRIIAWTMNSPGCQNDRTAFKFSGFEQLLQDLPPDYFILGDAAYPASDRVLVPYPGTNLPTFHDAFNFWQSQGRISIEQTFGIMVRTWGILWRPMEFGLGRVVEVVGAVVRLHNFCRDRQVSVPTHNVGKITVPVEVTFNSHGLIDNDYFRPASTRPGRPHENQAALSKPREDIRQELEIRGFVRPAHNIARNKNR 3672
            V  +RKCVGAMDGLFVR I+P+ ++ AEPN YY+GHK GFGMNFQ +CDA+YRI+AWTM+ PG QNDRTAF F+ F++LL  LP  +F++GDAAY AS+RV+VP+PGT+L    DA N++ SQ R++IEQT+GI+VR WGILWRPME  + +   VV AVVRLHNFCRDR+V VPT N G    P EV F+  GLI +DYF     R GRP ++QA  SKPRE IR+ELE+ G +RP HNIAR+  R
Sbjct:   15 VDVVRKCVGAMDGLFVRMIKPSAKEVAEPNLYYNGHKNGFGMNFQAVCDAQYRIVAWTMSCPGSQNDRTAFNFAWFDKLLAGLPEGHFVVGDAAYGASERVVVPFPGTSLSASQDACNYYVSQCRMAIEQTYGILVRRWGILWRPMEVRIEKFEHVVNAVVRLHNFCRDRKVDVPTENTGSAIPPPEVAFDDDGLISSDYFETVPVRTGRPVKDQAKASKPREAIRKELEVAGLMRPEHNIARSHKR 261          
BLAST of mRNA_P-littoralis_Contig193.107.1 vs. uniprot
Match: A0A6H5K540_9PHAE (DDE Tnp4 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K540_9PHAE)

HSP 1 Score: 325 bits (833), Expect = 1.260e-97
Identity = 178/384 (46.35%), Postives = 220/384 (57.29%), Query Frame = 1
Query: 2521 TVKHRSTLLLRERRAWPLYIKPMLGDGTFKGRFRMHHVDFKILVDHLRPELERDTTMGALRNGAVPVEYQVGLTLRWLAGASMYEGMDGHVIARSTAYQTAFRVIKAINDCTELDCKWPATPEDVADKAAHFEKRCSVGSIRKCVGAMDGLFVRTIRPTTRDTAEPNSYYSGHKKGFGMNFQGICDAEYRIIAWTMNSPGCQNDRTAFKFSGFEQLLQDLPPDYFILGDAAYPASDRVLVPYPGTNLPTFHDAFNFWQSQGRISIEQTFGIMVRTWGILWRPMEFGLGRVVEVVGAVVRLHNFCRDRQVSVPTHNVGKITVPVEVTFNSHGLIDNDYFRPASTRPGRPHENQAALSKPREDIRQELEIRGFVRPAHNIARNKNR 3672
            +++ RSTL+ R RR +  YIKPML D TF  RFRM + DF++LVDHLRP L+++  MG LRNGA+PVEYQV +TLRWLAG S YE MDGHVIARSTAY                                                                                     +CDA+YRI+AW MN PG QNDRTAF FSGF++LL  LP  +F++GDAAY AS+RV+VP+PGT+L    DA N++ SQ R++IEQT+GI+V   G+    +E        VV AVVRLHNFCRDR+V VPT N G    P EV F+  GLI +DYF     R GRP ++QA  SKPRE IR+ELE+ G +RP HNIAR+  R
Sbjct:   42 SMRSRSTLVARVRRPFETYIKPMLQDHTFSMRFRMEYDDFRVLVDHLRPALQKNEKMGLLRNGAIPVEYQVAMTLRWLAGGSTYECMDGHVIARSTAYHA-----------------------------------------------------------------------------------VCDAQYRIMAWMMNCPGSQNDRTAFNFSGFDKLLAGLPEGHFVVGDAAYGASERVVVPFPGTSLSASQDACNYYMSQCRMAIEQTYGILVSVVGMAKVVVE-------HVVNAVVRLHNFCRDRKVDVPTENTGSAIPPPEVAFDDDGLISSDYFETVPVRTGRPVKDQAKASKPREAIRKELEVAGLMRPEHNIARSHKR 335          
BLAST of mRNA_P-littoralis_Contig193.107.1 vs. uniprot
Match: A0A6H5JVS8_9PHAE (DDE Tnp4 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JVS8_9PHAE)

HSP 1 Score: 318 bits (815), Expect = 3.800e-95
Identity = 173/384 (45.05%), Postives = 219/384 (57.03%), Query Frame = 1
Query: 2521 TVKHRSTLLLRERRAWPLYIKPMLGDGTFKGRFRMHHVDFKILVDHLRPELERDTTMGALRNGAVPVEYQVGLTLRWLAGASMYEGMDGHVIARSTAYQTAFRVIKAINDCTELDCKWPATPEDVADKAAHFEKRCSVGSIRKCVGAMDGLFVRTIRPTTRDTAEPNSYYSGHKKGFGMNFQGICDAEYRIIAWTMNSPGCQNDRTAFKFSGFEQLLQDLPPDYFILGDAAYPASDRVLVPYPGTNLPTFHDAFNFWQSQGRISIEQTFGIMVRTWGILWRPMEFGLGRVVEVVGAVVRLHNFCRDRQVSVPTHNVGKITVPVEVTFNSHGLIDNDYFRPASTRPGRPHENQAALSKPREDIRQELEIRGFVRPAHNIARNKNR 3672
            T ++RSTL+ RERR +  +IKP+L D TF  RFRM + DF++L+DHLRP L ++  MG LR GA+PVEYQ+ +TLRWLAG S+YE MDGHVIARSTAY     VI A+N C EL+CKWP    DV               +RKCVGAMDGLFVR I+P+ ++ AEPN YY+GH+KG                                                 ++GDAAY AS+RV+VP+PGT+L    DA N + SQ R++IEQT+GI+VR WGILWRPME  + +   VV                                F+  GLI +DYF     R GRP ++QA  SKPRE IR+ELE+ G +RP HNIAR+ NR
Sbjct:   42 TKRNRSTLVARERRPFETHIKPLLQDHTFSVRFRMEYDDFRVLIDHLRPALHKNEKMGLLRIGAIPVEYQIAMTLRWLAGGSIYECMDGHVIARSTAYHVTSTVINALNACPELNCKWPEARMDV---------------VRKCVGAMDGLFVRMIKPSAKEVAEPNLYYNGHRKGV------------------------------------------------VVGDAAYGASERVVVPFPGTSLSASQDACNNYVSQYRMAIEQTYGILVRRWGILWRPMEVRIEKFEHVVA-------------------------------FDDDGLISSDYFETVPVRTGRPVKDQAKASKPREAIRKELEVAGLIRPEHNIARSHNR 331          
BLAST of mRNA_P-littoralis_Contig193.107.1 vs. uniprot
Match: A0A6H5KCG0_9PHAE (DDE Tnp4 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KCG0_9PHAE)

HSP 1 Score: 310 bits (795), Expect = 4.270e-92
Identity = 160/302 (52.98%), Postives = 197/302 (65.23%), Query Frame = 1
Query: 2758 GASMYEGMDGHVIARSTAYQTAFRVIKAINDCTELDCKWPATPEDVADKAAHFEKRCSVGSIRKCVGAMDGLFVRTIRPTTRDTAEPNSYYSGHKKGFGMNFQGICDAEYRIIAWTMNSPGCQNDRTAFKFSGFEQLLQDLPPDYFILGDAAYPASDRVLVPYPGTNLPTFHDAFNFWQSQGRISIEQTFGIMVRTWGILWRPMEFGLGRVVEVVGAVVRLHNFCRDRQVSVPTHNVGKITVPVEVTFNSHGLIDNDYFRPASTRPGRPHENQAALSKPREDIRQELEIRGFVRPAHNIARN 3663
            G S++E MDG V A+STAY   +RVI AIN   E DC WP   +D  D+   + +R +   I  CVGAMDGLFV    P+ R    P  +YSGHKKGFGMNFQ +C+A Y+I AWTMN PG  NDRTAFK SGFE++L+ LP   +I+GD AYPASD+VLVPYPGT L    D++NF+QSQ RI IEQ FG MV+TWGILWRP++  LGRV  V+ AVVRLHNF R  +  VP  +  ++  P EV F   G ++  Y+    TR GRP   Q  +S PRE IRQ L+     RP  N+ RN
Sbjct:   51 GGSIFEVMDGCVFAKSTAYAIVYRVIDAINQTREFDCVWPEG-DDALDQCGVYRQRSTNNVIHMCVGAMDGLFVLIFEPSLRRHVNPRGFYSGHKKGFGMNFQAVCNARYKITAWTMNCPGSCNDRTAFKHSGFERVLKTLPKGAYIVGDGAYPASDQVLVPYPGTTLTPSQDSYNFYQSQARIFIEQAFGNMVKTWGILWRPLQVKLGRVSSVMNAVVRLHNFLRRWRAKVP-QSPWRVDQPQEVRFAPDGSLEGTYYDTVPTR-GRPTTGQR-VSAPREAIRQYLKQYSIGRPRWNLQRN 348          
BLAST of mRNA_P-littoralis_Contig193.107.1 vs. uniprot
Match: A0A6H5L386_9PHAE (DDE Tnp4 domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L386_9PHAE)

HSP 1 Score: 223 bits (569), Expect = 2.760e-60
Identity = 122/306 (39.87%), Postives = 176/306 (57.52%), Query Frame = 1
Query: 2554 ERRAWPLYIKPMLGDGTFKGRFRMHHVDFKILVDHLRPELERDTTMGALR--NGAVPVEYQVGLTLRWLAGASMYEGMDGHVIARSTAYQTAFRVIKAINDCTELDCKW-PATPEDVADKAAHFEKRCSVGSIRKCVGAMDGLFVRTIRPTTRDTAEPNSYYSGHKKGFGMNFQGICDAEYRIIAWTMNSPGCQNDRTAFKFSGFEQLLQDLPPDYFILGDAAYPASDRVLVPYPGTNLPTFHDAFNFWQSQGRISIEQTFGIMVRTWGILWRPMEFGLGRVVEVVGAVVRLHNFCRDRQVSVPTH 3462
            +R  W  +   +     FK  +RM    F+ L + L P L  +     LR  NGA+ V+ ++ + LR LAGAS  +      +   T Y T + VI AIN   E+   + P T  D    AA F+++ + G    CV  +DGLFV+T+ P+ +DTA   +YYSG K  +G+N Q +C A+YR  + +  +PG  ND  A+  S   + +  LP  +++LGDAAYP S+++L PYPG NLP   D+FNF  SQ R+ IEQ+FGI+V TWGILWRP++       +++ A+ RLHNF RD QV+ P H
Sbjct:   66 QRLDWDEHADDLEERDCFKRMYRMPRHAFEKLAELLAPLLTVNKHFAELRTLNGAISVQIRLAVALRILAGASYLDVAVMFGLGLPTVYATLWMVIDAINSTPEVGAFFFPQTEFDCRGHAARFKRKSTNGIFSFCVACVDGLFVKTLAPSPKDTANVIAYYSGQKCAYGINVQAMCTADYRFCSMSAITPGATNDWAAWLRSKLSRAVNRLPKGFYVLGDAAYPLSEQLLTPYPGKNLPLGEDSFNFHLSQLRVKIEQSFGILVGTWGILWRPLKVDFAGRTDLITALFRLHNFLRDEQVT-PVH 370          
BLAST of mRNA_P-littoralis_Contig193.107.1 vs. uniprot
Match: A0A6H5JV75_9PHAE (DDE Tnp4 domain-containing protein n=4 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JV75_9PHAE)

HSP 1 Score: 221 bits (564), Expect = 2.710e-59
Identity = 131/387 (33.85%), Postives = 201/387 (51.94%), Query Frame = 1
Query: 2527 KHRSTLLLRERRAWPLYIKPMLGDGTFKGRFRMHHVDFKILVDHLRPELERDTTMGA--LRNGAVPVEYQVGLTLRWLAGASMYEGMDGHVIARSTAYQTAFRVIKAINDCTELD-CKWPATPEDVADKAAHFEKRCSVGSIRKCVGAMDGLFVRTIRPTTRDTAEPNSYYSGHKKGFGMNFQGICDAEYRIIAWTMNSPGCQNDRTAFKFSGFEQLLQDLPPDYFILGDAAYPASDRVLVPYPGTNLPTFHDAFNFWQSQGRISIEQTFGIMVRTWGILWRPMEFGLGRVVEVVGAVVRLHNFCRDRQVSVPTHNVGKITVPVEVTFNSHG--LIDNDYFRPASTRPGRPHENQAALSKPREDIRQELEIRGFVRPAHNIARNKNR 3672
            K R+ +    R  W  +   +      +  +RM    F  L   L P L+          R GAV  + ++ + LR +AGAS  +      +++ TA+   ++V+ AIN   E+    +P + ++   +AA +E++ + G+ +  V A DGLFV+T+ PT  +T    SYYSG K G+G+N Q  CDA YR  + +  +PG  ND TA+  S     +++LPP +++LGDAAYP SD +L PYPG  LP   DAFNF+ SQ R+ IEQ FGI+V  WGILW+P+        +++ A+ RLHNF RD +V+ P H   +    V+V  +  G   +   +     T        ++     R+ I   L+ +   RP HN+ RN  R
Sbjct:   64 KTRAAIHEPRRLVWEDHAADLKKRKLLRRMYRMEEPVFNKLAGLLEPILQLYDYYARKRYRRGAVSTKIRLAIGLRMMAGASYIDAAMLFGVSKETAFSILWQVVDAINSTAEVGPFFFPQSEDECTRQAAEWEEKSTGGAFQGVVAAGDGLFVKTLAPTALNTPNVLSYYSGSKCGYGVNVQATCDANYRFCSMSCIAPGSTNDWTAWNHSDLSTAVKNLPPGFYMLGDAAYPLSDHLLTPYPGRGLPLDKDAFNFYLSQLRVRIEQAFGILVGQWGILWKPLRVQFAGRCDLITALFRLHNFLRDEKVT-PIHRSEEDAEVVQVRPHLLGDKTLPGTFSTTTKTTKDAQKPTRSGEVSTRKGITMMLDNKRQYRPKHNLVRNAAR 449          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig193.107.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5L6B6_9PHAE2.110e-14161.81DDE Tnp4 domain-containing protein n=3 Tax=Ectocar... [more]
A0A6H5K3F2_9PHAE2.290e-13356.76DDE Tnp4 domain-containing protein n=1 Tax=Ectocar... [more]
A0A6H5JJA1_9PHAE2.290e-13155.21Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5K6M2_9PHAE2.340e-13055.64DDE Tnp4 domain-containing protein n=1 Tax=Ectocar... [more]
A0A6H5KNF2_9PHAE2.810e-9961.13DDE Tnp4 domain-containing protein n=2 Tax=Ectocar... [more]
A0A6H5K540_9PHAE1.260e-9746.35DDE Tnp4 domain-containing protein n=1 Tax=Ectocar... [more]
A0A6H5JVS8_9PHAE3.800e-9545.05DDE Tnp4 domain-containing protein n=1 Tax=Ectocar... [more]
A0A6H5KCG0_9PHAE4.270e-9252.98DDE Tnp4 domain-containing protein n=1 Tax=Ectocar... [more]
A0A6H5L386_9PHAE2.760e-6039.87DDE Tnp4 domain-containing protein (Fragment) n=1 ... [more]
A0A6H5JV75_9PHAE2.710e-5933.85DDE Tnp4 domain-containing protein n=4 Tax=Ectocar... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig193contigP-littoralis_Contig193:365831..370829 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Pylaiella littoralis U1_48 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog4792.ETI53028
PFAMsDDE_Tnp_4
Model size3869
Max annot lvl4776|Peronosporales
Hectar predicted targeting categoryother localisation
Exons4
Evalue8.74e-43
EggNOG OGsKOG4585@1|root,KOG4585@2759|Eukaryota,3QI3U@4776|Peronosporales
Descriptionnuclease activity
Cds size1290
COG categoryS
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig193.107.1prot_P-littoralis_Contig193.107.1Pylaiella littoralis U1_48polypeptideP-littoralis_Contig193 368394..370641 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789931.0970085-UTR-P-littoralis_Contig193:365830..3680431680789931.0970085-UTR-P-littoralis_Contig193:365830..368043Pylaiella littoralis U1_48UTRP-littoralis_Contig193 365831..368043 +
1680789931.1078944-UTR-P-littoralis_Contig193:368215..3683931680789931.1078944-UTR-P-littoralis_Contig193:368215..368393Pylaiella littoralis U1_48UTRP-littoralis_Contig193 368216..368393 +
1680789931.1543972-UTR-P-littoralis_Contig193:370641..3708291680789931.1543972-UTR-P-littoralis_Contig193:370641..370829Pylaiella littoralis U1_48UTRP-littoralis_Contig193 370642..370829 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789931.121035-CDS-P-littoralis_Contig193:368393..3690681680789931.121035-CDS-P-littoralis_Contig193:368393..369068Pylaiella littoralis U1_48CDSP-littoralis_Contig193 368394..369068 +
1680789931.1332877-CDS-P-littoralis_Contig193:369476..3697461680789931.1332877-CDS-P-littoralis_Contig193:369476..369746Pylaiella littoralis U1_48CDSP-littoralis_Contig193 369477..369746 +
1680789931.141986-CDS-P-littoralis_Contig193:370296..3706411680789931.141986-CDS-P-littoralis_Contig193:370296..370641Pylaiella littoralis U1_48CDSP-littoralis_Contig193 370297..370641 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-littoralis_Contig193.107.1

>prot_P-littoralis_Contig193.107.1 ID=prot_P-littoralis_Contig193.107.1|Name=mRNA_P-littoralis_Contig193.107.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=430bp
MHPPLSRRAKRLRRLRRMTARLLRLMDLLAVLDNLDKLETPTTTVKHRST
LLLRERRAWPLYIKPMLGDGTFKGRFRMHHVDFKILVDHLRPELERDTTM
GALRNGAVPVEYQVGLTLRWLAGASMYEGMDGHVIARSTAYQTAFRVIKA
INDCTELDCKWPATPEDVADKAAHFEKRCSVGSIRKCVGAMDGLFVRTIR
PTTRDTAEPNSYYSGHKKGFGMNFQGICDAEYRIIAWTMNSPGCQNDRTA
FKFSGFEQLLQDLPPDYFILGDAAYPASDRVLVPYPGTNLPTFHDAFNFW
QSQGRISIEQTFGIMVRTWGILWRPMEFGLGRVVEVVGAVVRLHNFCRDR
QVSVPTHNVGKITVPVEVTFNSHGLIDNDYFRPASTRPGRPHENQAALSK
PREDIRQELEIRGFVRPAHNIARNKNRNR*
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mRNA from alignment at P-littoralis_Contig193:365831..370829+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-littoralis_Contig193.107.1 ID=mRNA_P-littoralis_Contig193.107.1|Name=mRNA_P-littoralis_Contig193.107.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=4999bp|location=Sequence derived from alignment at P-littoralis_Contig193:365831..370829+ (Pylaiella littoralis U1_48)
GGGAATTGCATCATCACTCCGCCGTCCAAGGTGGCCGTAATTTCCGGCCC TGGTAAATCTCGTATGGTCATCGGGGAATGGTGAGCGCGATGGTACCTAC CTCCGAAGTTGCGGCTCGGCGTACACAGCATGCCTGCATATCCTTGTTGT AGTTGATTCTCCCATTTAGCTCATCTCCAAAATCTAGCCCGTGGTCACAA AAAGTGCTGAGCCCTAGGAAGATCCGAAAAACAGAAATAAAATACTCCGG AGTAGAAAATATTGTACTGCACAAGGGATACCCTGCCGGTCGCCCCGGCG GTTCAGTTGGTTATCCACGCAACCTCCTGATTTTCAGGCGTGAGTTCGAA TCCCAGTGCAGTAACACGATCTGGGGCTTTTTCTCACATTGCGCGTGAAA GTGGAAAGCGATCAATTCGTGAGTAAACAAGATTCGATCGTACCATCGCG AGGGAGAGGGATTTCTGTCCCCTTTCTCGCCATAAAAGCTCAACCAAAAA GGCAAACACCGCAGAGGGAAGTGGAGAAAAAAAAAAAACTCCTGGTTGAC TTCCTCATGTGTGACCCCGTTCGGAGAGTCTACCCACCCGCAACGTGTAG AGTGGCGTCCAATGAAAGGGATGACAACACACACACACACACACACACAC ACACACAAGGGATACCCAATAAAGACCGAAGAAGATACTCCTTCCTACGC GGCGTGCATCACTGAAGTACGTGTGTGTGTTTGTGTTGTTGTTGTTGTTG TTGATTTTCACATTAGCTCACTACCGCCGCAGTCTAGCCCGTGGTCACAA ACCAGGCACATATCGTGCCAGGAGGAAAAAAATAAAAAAATAATATATAT GGACTATGATGACCCACAGTCAGATCAGATATGGTATCGTTGGGGTACCA TCTGTGGTGGCCAGAATACCAAATAAATAAAGAAAAAATAACAGGCTCGA AAGAAAACCAAAAATTGGAACCAGTTTGTGTGTTTGTTGTTGATTCACAC ATTAGGTCCTGTACTGTATGAACGATAGTCGGAAAATCATTATTGGAATG AATCATGATCATGGAAGGTCTCTGATTGGCCAAGCTCTCATTACCTACCG ACGGATATAATGATTTTCCGAAAAACCCTTCGAGACCAAAGAAGTCCAAT TAGACTTAGGTCCTGTATTAACAATAGTAGGAAAATCATTATTGGAATAA ATCATTATCATGGAAGATCTCTGATTCGCCAAGCTCTCATTACCTACCGA CGGAAATAATGATTTTCCGAAAAAACCTTCGAGACCAAAGAAGTCGAAAA AGACATAGCTGGAAGAAAATCATTAATCATTATTGGAGGTCTTGACCCGA TCGAAGGCTTTTTCTGAACGATGTGCCTCGCGCACGAGGCTGGCCAGACA AAATACTACCGAGGCAACCAATAGCAGTGCCATAGAACATAGCATAGAGG TTTGCCGTTGAACCAGGCAAGCCATTGTTAGCACCATACATGACGACAGC GCAACAAACACACCAGTATGCATGATTGACGACCCACAATTCATTTTGCA CAACACACCATCAGCACACACGACGCAGACAGGCAGGTCACAGGTCACGA GCACGAAGCCGCCTCTTACAGCCCAAGGCAGACAGACGCATGACACAGCA GCAGTCTTGAGTGCATGAGCCAACACACGTACCCACGCACCGCACACATC TACAAACGGGGTGTCTGTCAGCATCAAGGCTTGGTGCACAGAGCCCACGA CCCTGCCTTGCATGCGAGAGAGGACGCACATGATGCGTCCAAGTACTGCT GTACTGCTGTACGGAGTACTTTGGTTCTTCGAAGTATATTTTGTTGTTCT GTTTTACCCGTCGTGCCGTCATCATCAGAGGTTTGCATTCTGCTGGCGTT TACAGGCCTTCAAAGAGCCTTTTCAGCTCTTTCGTTGATATGGCTCGAAG GGTTTTTCGGAAAATCATACGATGATAATTATTTCAATAATGATTTTCCA ACTATCGTTAATACGAGGTGTCTGTCAGCATCAAGGCTTGGTGCACAGAG CCCACGACCTTGCCTTGCATGCGAGAGAGGACGCACATGATGCGTCCAAG TACTGCAGTAACGCTGTACGGAGTACTTTGGTATATCTTATTGTTCTGTT TTACCCGTCGTGCCGTCATCATCAGAGGTTTGCATTCGGCTGGCGTTTAC AGGCCTTCAAAGAGCCTTTTCAGCTCTTCCGTTAATATGGCTCGAAGGGT TTTTCGGAAAATCATACGATGATAATTATTTCAATAATGATTTTCCAACT ATCGCTAAGGCCCTGTGTTAACGGAAGTTGGAAAATCATTATTTAAATCA TTATCATTATATGATTTTCCGAAAAACCCTTCGAGCCATATTAACGGAAA CACAGAAAACGCTCGAACGGGACTGTCGGAGCCGTTTGACGCCAACAAAT GTATAAAACCTTCTCTGCTGGCGTTGGAAAAATTCAAATCCACGCCCCAG GACAGCAGGAGCTCATAGCAGCACAGCAAACAAGTTGCTATACTGCTGTC CCTCTCACCGACCATGCACCCCCCTCTTAGCCGAAGGGCCAAGCGTCTTC GGCGTTTGCGCAGAATGACAGCGAGACTGCTGCGGTTGATGGATCTCCTC GCCGTACTAGATAACCTCGACAAGCTCGAAACTCCAACAACAACAGTAAA GCACCGCAGCACCCTGTTGCTGCGAGAAAGGCGAGCGTGGCCTCTTTACA TCAAGCCCATGCTAGGAGACGGGACCTTCAAGGGGCGCTTCCGCATGCAC CATGTCGACTTCAAGATCCTGGTTGATCATCTTCGGCCGGAGCTGGAGAG AGACACTACGATGGGAGCCCTCCGGAACGGCGCCGTTCCGGTCGAGTATC AGGTCGGTTTGACCCTGCGCTGGTTGGCTGGTGCGTCCATGTACGAAGGC ATGGACGGGCATGTCATCGCTAGGAGTACCGCATACCAGACAGCGTTTCG CGTTATCAAGGCCATCAACGACTGTACTGAGCTGGACTGCAAGTGGCCCG CCACGCCGGAGGACGTCGCCGACAAGGCCGCTCACTTCGAAAAACGCTGC TCAGTCGGTAGTATCCGAAAATGCGTCGGGGCCATGGACGGGCTCTTTGT CCGCACCATCAGACCGACCACCAGAGATACAGCCGAACCGAACAGCTACT ACAGCGGTCACAAGAAGGGATTCGGCATGAACTTTCAGGTACACACTACG AAATCTGAAGTAGAAGGGCGTCTTCTGTTTTCATGTACCCACCTCTCTCT CTCTCTCTCTCTACAATAAATATGGCATTGATCTCATAAAAACATAGGGA TCCGTATTTGATGCTCTGGTGCACTCTGCTAGTACAGCAGTACATTTACG TATGCACTACTGCTGTAATGTGCATGACACACCTTAACAACTACAACTGC TGCAGCCCCTTCCGAATACGGACATGCCGCCTGACAAAAGAGAACATGCA TGTATGACAAAATTTGCAAATGCGGTGATAAGGCCATGTGGTAACCGCGG ATGGCTGAAGCGCACATCGATCCGCTGTCCTACTCGATGTGAGTATGTGT CCCAAAACTGAACTGTTCGCGAACTCTTGCCCTCTCACTTATACAGGGGA TCTGCGACGCGGAGTACAGGATCATCGCATGGACCATGAACAGTCCCGGG TGCCAAAATGACCGCACGGCCTTCAAGTTTTCCGGGTTCGAACAGCTCCT CCAGGACTTGCCCCCGGACTACTTCATCCTGGGCGACGCGGCGTACCCCG CTTCCGACCGCGTCCTGGTCCCGTACCCCGGGACAAACCTGCCAACGTTC CACGACGCCTTCAACTTCTGGCAGTCTCAGGGGCGGATCTCCATCGAGCA GACCTTCGGCATAATGGTGAGTGCTCAACGCTTCAGCTGCTGGACTTCCA AATGACGACCATTCGGGGACACCTATTTTGTGTAGCTGAGCTTGTTTGTG TGCGATCTCGAGGTATCTTGCGTGTCGACGATTTCGCCCATTTCTATTTG ATTTTCCCGCCGCGCGCGGTCCAGCACTGGTTGTCAGCTAAAGTACAACT TTTTGTCGTGGGCTGCTGCGATTCAAAAAATTTTGCTGTTTGAAAGTCAT GCGGGTAGCCTTGGTCCCCGCTTGCTGGTGGTCCTCACTGCTGCTGTGCT CTTTCGGGGAGACGAGGACAGCTCCCAGTGTAGGAACAAGTCGCAATTTT GTTCGAGCGGCAGGGTAAGCGAGACGCGTGTTTTATTTTTTAGAGCTGTG CGATTGGGGTCGATCACAGCTGTGAGCACACACTTTCGACGAGCAAACTT CGCGATTTTCTCTTTTGTCTGCTTATTTCATTTGTCTCTTTTCCTGCCAA GTAGTCGGAGACCATCCAACACCCACACCCGACGCCGTTCTTTCCCTGTG CTTGATATTTAAAAAGGTCCGGACGTGGGGAATCCTTTGGCGCCCCATGG AGTTTGGGCTGGGGCGGGTTGTTGAAGTGGTGGGGGCCGTCGTTCGCCTG CACAACTTCTGCAGGGATCGGCAGGTGTCAGTCCCCACGCACAACGTGGG GAAGATCACAGTGCCCGTGGAGGTGACCTTCAACAGCCACGGCCTAATCG ACAACGACTACTTCAGACCGGCCAGTACGCGTCCGGGCCGGCCACATGAG AACCAGGCTGCACTGTCCAAGCCAAGGGAGGACATCCGCCAGGAACTCGA GATCAGAGGCTTTGTGCGTCCCGCACACAACATTGCCAGGAATAAAAACA GGAATCGCTAGGATAGGATAGGGGTGGCGTTATTTTGTTGTTGCTGAAAA TTATTTTCGTGTCGATGTTTCTCTTCGCTTGATATTATTCCGCTGGAAAT GTCCCTTTGCTGGCGGAGACATGTAGTCTGTGGGCAACCTGCTGTAGAAT TTTGGAGAATACCGCAAAACTGTGTGTACTCCCCCCCGGATAGTTATTG
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Coding sequence (CDS) from alignment at P-littoralis_Contig193:365831..370829+

>mRNA_P-littoralis_Contig193.107.1 ID=mRNA_P-littoralis_Contig193.107.1|Name=mRNA_P-littoralis_Contig193.107.1|organism=Pylaiella littoralis U1_48|type=CDS|length=1290bp|location=Sequence derived from alignment at P-littoralis_Contig193:365831..370829+ (Pylaiella littoralis U1_48)
ATGCACCCCCCTCTTAGCCGAAGGGCCAAGCGTCTTCGGCGTTTGCGCAG
AATGACAGCGAGACTGCTGCGGTTGATGGATCTCCTCGCCGTACTAGATA
ACCTCGACAAGCTCGAAACTCCAACAACAACAGTAAAGCACCGCAGCACC
CTGTTGCTGCGAGAAAGGCGAGCGTGGCCTCTTTACATCAAGCCCATGCT
AGGAGACGGGACCTTCAAGGGGCGCTTCCGCATGCACCATGTCGACTTCA
AGATCCTGGTTGATCATCTTCGGCCGGAGCTGGAGAGAGACACTACGATG
GGAGCCCTCCGGAACGGCGCCGTTCCGGTCGAGTATCAGGTCGGTTTGAC
CCTGCGCTGGTTGGCTGGTGCGTCCATGTACGAAGGCATGGACGGGCATG
TCATCGCTAGGAGTACCGCATACCAGACAGCGTTTCGCGTTATCAAGGCC
ATCAACGACTGTACTGAGCTGGACTGCAAGTGGCCCGCCACGCCGGAGGA
CGTCGCCGACAAGGCCGCTCACTTCGAAAAACGCTGCTCAGTCGGTAGTA
TCCGAAAATGCGTCGGGGCCATGGACGGGCTCTTTGTCCGCACCATCAGA
CCGACCACCAGAGATACAGCCGAACCGAACAGCTACTACAGCGGTCACAA
GAAGGGATTCGGCATGAACTTTCAGGGGATCTGCGACGCGGAGTACAGGA
TCATCGCATGGACCATGAACAGTCCCGGGTGCCAAAATGACCGCACGGCC
TTCAAGTTTTCCGGGTTCGAACAGCTCCTCCAGGACTTGCCCCCGGACTA
CTTCATCCTGGGCGACGCGGCGTACCCCGCTTCCGACCGCGTCCTGGTCC
CGTACCCCGGGACAAACCTGCCAACGTTCCACGACGCCTTCAACTTCTGG
CAGTCTCAGGGGCGGATCTCCATCGAGCAGACCTTCGGCATAATGGTCCG
GACGTGGGGAATCCTTTGGCGCCCCATGGAGTTTGGGCTGGGGCGGGTTG
TTGAAGTGGTGGGGGCCGTCGTTCGCCTGCACAACTTCTGCAGGGATCGG
CAGGTGTCAGTCCCCACGCACAACGTGGGGAAGATCACAGTGCCCGTGGA
GGTGACCTTCAACAGCCACGGCCTAATCGACAACGACTACTTCAGACCGG
CCAGTACGCGTCCGGGCCGGCCACATGAGAACCAGGCTGCACTGTCCAAG
CCAAGGGAGGACATCCGCCAGGAACTCGAGATCAGAGGCTTTGTGCGTCC
CGCACACAACATTGCCAGGAATAAAAACAGGAATCGCTAG
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