prot_P-littoralis_Contig193.96.1 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig193.96.1
Unique Nameprot_P-littoralis_Contig193.96.1
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length267
Homology
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BLAST of mRNA_P-littoralis_Contig193.96.1 vs. uniprot
Match: D7G1I7_ECTSI (Protein HGH1 homolog n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G1I7_ECTSI)

HSP 1 Score: 332 bits (851), Expect = 6.970e-108
Identity = 171/184 (92.93%), Postives = 179/184 (97.28%), Query Frame = 0 
Query:   42 SITRELVEETVPFLRDPRPEIRQAAAATAVAASATKEGVALLHECGAVKWLCRISGDVGTIGKDAVSCLVNVSAEETSVAALEDMCKAGIVSRMMEAVSDEECSPFVRDLCLQLLANVTRVQVGAIKLAQIGVAGGA-REGQYIRRLARWLAEHPAEEGLAYPVLVGGSRDDARVVDRRAALRD 224
            SITREL+EETVPFLRDPRPEIRQAAAATAVAASATKEGVALLH+CGAVKWLCRISGDVGTIGKDAVSCLVNVSAEETSVAALEDMCKAGIV+RMMEAVSDE+C PF+RDLCLQLLANVTRVQVGA KLAQ+GVAGGA REGQYIRRLARWLA+HPA+ GL YPVLVGGSRDDARVVDRRAALRD
Sbjct:   54 SITRELIEETVPFLRDPRPEIRQAAAATAVAASATKEGVALLHKCGAVKWLCRISGDVGTIGKDAVSCLVNVSAEETSVAALEDMCKAGIVNRMMEAVSDEQCIPFMRDLCLQLLANVTRVQVGATKLAQVGVAGGALREGQYIRRLARWLAKHPADNGLPYPVLVGGSRDDARVVDRRAALRD 237
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig193.96.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7G1I7_ECTSI6.970e-10892.93Protein HGH1 homolog n=2 Tax=Ectocarpus TaxID=2879... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011989Armadillo-like helicalGENE3D1.25.10.10coord: 25..228
e-value: 9.8E-10
score: 39.5
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 21..42
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 240..256
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 217..233
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 217..266
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..42
IPR016024Armadillo-type foldSUPERFAMILY48371ARM repeatcoord: 48..162

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig193contigP-littoralis_Contig193:338840..344629 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig193.96.1mRNA_P-littoralis_Contig193.96.1Pylaiella littoralis U1_48mRNAP-littoralis_Contig193 336859..352005 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig193.96.1 ID=prot_P-littoralis_Contig193.96.1|Name=mRNA_P-littoralis_Contig193.96.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=267bp
MPTFEDVTDTEQPAAAGTSEGGAGASTTVGMSNSSSSSSNCSITRELVEE
TVPFLRDPRPEIRQAAAATAVAASATKEGVALLHECGAVKWLCRISGDVG
TIGKDAVSCLVNVSAEETSVAALEDMCKAGIVSRMMEAVSDEECSPFVRD
LCLQLLANVTRVQVGAIKLAQIGVAGGAREGQYIRRLARWLAEHPAEEGL
AYPVLVGGSRDDARVVDRRAALRDDTRGSDSDSEGEEGGEEREGGARREA
KRDGRRSGGGGGGGGA*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011989ARM-like
IPR016024ARM-type_fold