mRNA_P-littoralis_Contig193.96.1 (mRNA) Pylaiella littoralis U1_48

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-littoralis_Contig193.96.1
Unique NamemRNA_P-littoralis_Contig193.96.1
TypemRNA
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Homology
[Close]
BLAST of mRNA_P-littoralis_Contig193.96.1 vs. uniprot
Match: D7G1I7_ECTSI (Protein HGH1 homolog n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G1I7_ECTSI)

HSP 1 Score: 392 bits (1007), Expect = 4.410e-122
Identity = 200/255 (78.43%), Postives = 212/255 (83.14%), Query Frame = 2 
Query:  893 EVLDQWQHCASVLCNAARIPEGRRALRRPDPLVALTELLPQLSSANPVRRWGIAGCVRNCCFEELDHPWLLHEVKVVPHLLMRLSDHGDEYNFEEKVILDPRVWRKD------EGSDAVSRRREPVQCIKRDVVEALLQLCAILESRQSLRKCGVYFVIREMDKSEPDAEISQVCYNLVNFLQRDEQDKQARIDYLKGLAEAEAKEE--SAGGEPSPXXXXXXXXXXXXXXXXXXXXXGSTADRTAYLRDKLAAE 1633
            EVLDQWQHCASVLCNAARIPEGRRALRRPDPLVALTE+LPQL+SANPVRRWG+AGCVRNCCFEELDHPWLLHEVKVVPHLLMRL+D  DEY+FEEKVILDPRVWRK+      E S A  RRREPVQCIKRD+VEALLQLCAILESRQSLRKCGVYFVIREMDKSEPDAEISQVCYNLVNFLQRDEQDKQ RIDYLK LA++E KE   SAG +P+                      GSTADRTA+LRDKL  E
Sbjct:  261 EVLDQWQHCASVLCNAARIPEGRRALRRPDPLVALTEVLPQLASANPVRRWGVAGCVRNCCFEELDHPWLLHEVKVVPHLLMRLADDKDEYDFEEKVILDPRVWRKEKEEGSYEDSPAAPRRREPVQCIKRDIVEALLQLCAILESRQSLRKCGVYFVIREMDKSEPDAEISQVCYNLVNFLQRDEQDKQGRIDYLKSLADSEGKEAAGSAGEDPA----TTEPSSEIEVMPPSTASPGSTADRTAFLRDKLVVE 511
[Close]
BLAST of mRNA_P-littoralis_Contig193.96.1 vs. uniprot
Match: A0A835YVT2_9STRA (DUF383 domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YVT2_9STRA)

HSP 1 Score: 141 bits (355), Expect = 6.090e-32
Identity = 80/180 (44.44%), Postives = 106/180 (58.89%), Query Frame = 2 
Query:  899 LDQWQHCASVLCNAARIPEGRRALRRPDPLVALTELLPQLSSANPVRRWGIAGCVRNCCFEELDHPWLLHEVKVVPHLLMRLSDHGDEYNFEEKVILDPRVWRKDEGSDAVS-RRREPVQCIKRDVVEALLQLCAILESRQSLRKC-----GVYFVIREMDKSEPDAEISQVCYNLVNFL 1420
            +DQWQH AS+LCN  R   GR+ L R D  V L +LLPQL SA   RR GI+GC+RN CF+   HP LL   +V+PH+L  L+   D Y+F++KV LDP VWR   G  A++   REP    + +++EAL  LCA  ES  +LRK      G Y V+RE  + E D  +   C+ +   L
Sbjct:  179 VDQWQHAASLLCNVTREETGRQILARADTGV-LEDLLPQLRSAVAARRRGISGCIRNLCFDAKLHPRLLDGARVLPHVLRGLASSRDAYSFQDKVALDPMVWRAPAGEGAMTFHEREPDAETRGNLLEALQLLCAHPESCAALRKQATLLQGTYCVVRETARRETDERLLVACHAIATAL 357
[Close]
BLAST of mRNA_P-littoralis_Contig193.96.1 vs. uniprot
Match: A0A7S3QJL9_9STRA (Protein HGH1 homolog n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3QJL9_9STRA)

HSP 1 Score: 124 bits (310), Expect = 5.200e-26
Identity = 78/195 (40.00%), Postives = 114/195 (58.46%), Query Frame = 2 
Query:  887 AAEVLDQWQHCASVLCNAARIPEGRRALRRPD-----------PLVALTELLPQLSSANPVRRWGIAGCVRNCCFEELDHPWLLHEVKVVPHLLMRLSDHGDEYNFEEKVILDPRVWRKDEGSDAVSRRREPVQCIKRDVVEALLQLCAI-LESRQSLRKCGVYFVIREMDKSEPDAEISQVCYNLVNFLQRDEQ 1435
            AA   D +QH A+VL NA ++ +GRR + + +           P   L  +LP+L S NP+RR GI+G ++NCCF++    WLL+EV V+P++L  LS   +E + +EK  +DP +W   EG D V   REP Q  +  +VEA+L LCA    SR+ +R    Y V++ MD SE   EIS+     V +L+RDE+
Sbjct:  260 AACADDPFQHFAAVLMNATQVEQGRRFVMKINHNSSSASASAKPTSILQRILPELRSTNPIRRRGISGTLKNCCFDKDSSWWLLNEVDVLPNILYPLSG-PEELDLDEKRGMDPDLWL--EGPDKV---REPDQVARLLLVEAVLLLCATGRRSREQIRVQRTYVVLKTMDMSEESEEISERIDECVQYLRRDEE 448
[Close]
BLAST of mRNA_P-littoralis_Contig193.96.1 vs. uniprot
Match: A0A7S2E724_TRICV (Hypothetical protein n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S2E724_TRICV)

HSP 1 Score: 113 bits (282), Expect = 3.060e-24
Identity = 77/204 (37.75%), Postives = 115/204 (56.37%), Query Frame = 2 
Query:  902 DQWQHCASVLCNAARIPEGRRALRRPD------PLVALTELLPQLSSANPVRRWGIAGCVRNCCFEELDHPWLLHEVKVVPHLLMRLSDHGDEYNFEEKVILDPRVWRKDEGSDAVSRRREPVQCIKRDVVEALLQLCAI-LESRQSLRKCGVYFVIREMDKSEPDAEISQVCYNLVNFLQRDEQDKQARIDYLKGLAEAEAKE 1492
            D +QH A+VL NA +   GR+   R +          L  +LPQL S+NPVRR G+AG V+NCCF++    WLL+EV +  HLL  L+   +E   +EKV L P +W   EG D V   RE     +  +VE++L LCA    SR++LR    Y +++ MD +E + ++S    + V FL+RDE+  +      +G ++A A+E
Sbjct:   24 DPYQHFAAVLMNATQTERGRKFAMRLEYKADGSTTSVLQSILPQLRSSNPVRRRGVAGAVKNCCFDKDSAYWLLNEVDLARHLLYPLAG-PEELEPDEKVGLHPDLWI--EGPDKV---RESDATTRLLLVESVLLLCASGRRSRETLRAKRTYVILKVMDMTEEEEDVSTRVNDCVQFLRRDEEGTE------EGSSDARAEE 215
[Close]
BLAST of mRNA_P-littoralis_Contig193.96.1 vs. uniprot
Match: A0A6U1R1M9_CYCTE (Hypothetical protein n=1 Tax=Cyclophora tenuis TaxID=216820 RepID=A0A6U1R1M9_CYCTE)

HSP 1 Score: 104 bits (259), Expect = 1.570e-21
Identity = 64/147 (43.54%), Postives = 87/147 (59.18%), Query Frame = 2 
Query:  995 LTELLPQLSSANPVRRWGIAGCVRNCCFEELDHPWLLHEVKVVPHLLMRLSDHGDEYNFEEKVILDPRVWRKDEGSDAVSRRREPVQCIKRDVVEALLQLCAI-LESRQSLRKCGVYFVIREMDKSEPDAEISQVCYNLVNFLQRDE 1432
            L +LLPQL SANP+RR G+AG ++NCC +     WLL EVK+  HLL  L+   +E + +EK  LDP +W   EG D V   REP    +  +VE+LL LCA   +SR+SLR    Y +++  D  E    +S+     V FL+RDE
Sbjct:   41 LQQLLPQLRSANPIRRRGVAGTIKNCCLDTDSAWWLLEEVKLTKHLLYPLAG-PEELDVDEKRGLDPDLWL--EGPDKV---REPDHYTRLYLVESLLLLCATGRKSRESLRLSRTYVILKWADMVEEHENVSERINECVQFLRRDE 181
[Close]
BLAST of mRNA_P-littoralis_Contig193.96.1 vs. uniprot
Match: G4YZ65_PHYSP (Protein HGH1 homolog n=17 Tax=Phytophthora TaxID=4783 RepID=G4YZ65_PHYSP)

HSP 1 Score: 104 bits (260), Expect = 8.290e-20
Identity = 75/243 (30.86%), Postives = 126/243 (51.85%), Query Frame = 2 
Query:  785 GAIAIA--KARRAGRSXXXGRAEKPRGTDEGVGGGGAAEVLDQWQHCASVLCNAARIPEGRRALRRPDPLVALT-ELLPQLSSANPVRRWGIAGCVRNCCFEELDHPWLLHEVKVVPHLLMRLSDHGDEYNFEEKVILDPRVWRKDEGSDAVSRRREPVQCIKRDVVEALLQLCAILESRQSLRKCGVYFVIREMDKSEPDAEISQVCYNLVNFLQRDEQDKQARIDYLKGLAEAEAKEESAG 1504
            G IA+   K R+   S   G  E P G D   G     +  D++Q+ A++L N +++ +GR  L +     +L   LLPQL S N VRR G+   ++N CF+  +H +L  ++ V  H+++ L+   +E + ++K+ ++P V+     S    ++RE  + ++   V+ LL LC     R+ LR+  VY +IR     EPD EI    Y LV+FL RDE  ++   + ++  + A  +E   G
Sbjct:  143 GTIAVRERKIRKLTNSFLEGEPE-PDGVDSSSG---EPKWDDEYQYVANILANISQLEQGRDFLLKMRQSTSLAGALLPQLKSPNVVRRRGVTAALKNLCFDTDNHFYLYDQLDVPTHMMVLLAG-PEELDEDDKIGMNPVVY-----SQGDKKKREHDRLVRLAAVDCLLLLCTTRNGRKELRRKKVYPIIRNAHLEEPDEEIGDQIYKLVDFLIRDEDGEEPDWNEIRAKSFAPDQETKTG 375
[Close]
BLAST of mRNA_P-littoralis_Contig193.96.1 vs. uniprot
Match: A0A2P4WXK1_9STRA (Protein HGH1 homolog (Fragment) n=1 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4WXK1_9STRA)

HSP 1 Score: 102 bits (255), Expect = 8.840e-20
Identity = 68/212 (32.08%), Postives = 113/212 (53.30%), Query Frame = 2 
Query:  803 KARRAGRSXXXGRAEKPRGTDEGVGGGGAAEVLDQWQHCASVLCNAARIPEGRRALRRPDPLVALT-ELLPQLSSANPVRRWGIAGCVRNCCFEELDHPWLLHEVKVVPHLLMRLSDHGDEYNFEEKVILDPRVWRKDEGSDAVSRRREPVQCIKRDVVEALLQLCAILESRQSLRKCGVYFVIREMDKSEPDAEISQVCYNLVNFLQRDEQ 1435
            K R    S   G  E P G D   G     +  D++Q+ A++L N +++ +GR  L +     +L   LLPQL S N VRR G+   ++N CF+  +H +L  ++ +  H+++ L+   +E + ++K+ ++P V+     S    ++RE  + ++   V+ LL LC     R+ LR+  VY +IR+    EPD EI    Y LV+FL RDE+
Sbjct:  151 KIRTLTNSFLEGEPE-PDGVDSATG---EPKWDDEYQYVANILANISQLEQGRDFLLKMRQSTSLAGALLPQLKSPNVVRRRGVTAALKNLCFDSDNHFYLYDQLDIPTHMMVLLAG-PEELDEDDKMGMNPVVY-----SQGDKKKREHDRLVRLAAVDCLLLLCTTRNGRKELRRKKVYPIIRDAHLVEPDEEIGDQIYKLVDFLIRDEE 352
[Close]
BLAST of mRNA_P-littoralis_Contig193.96.1 vs. uniprot
Match: A0A3R7J7J1_9STRA (Protein HGH1 homolog n=3 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3R7J7J1_9STRA)

HSP 1 Score: 103 bits (256), Expect = 9.080e-20
Identity = 72/232 (31.03%), Postives = 123/232 (53.02%), Query Frame = 2 
Query:  803 KARRAGRSXXXGRAEKPRGTDEGVGGGGAAEVLDQWQHCASVLCNAARIPEGRRALRRPDPLVALT-ELLPQLSSANPVRRWGIAGCVRNCCFEELDHPWLLHEVKVVPHLLMRLSDHGDEYNFEEKVILDPRVWRKDEGSDAVSRRREPVQCIKRDVVEALLQLCAILESRQSLRKCGVYFVIREMDKSEPDAEISQVCYNLVNFLQRDEQDKQARIDYLKGLAEAEAKEE 1495
            K R    S   G  E P G D   G    A+  D++Q+ A++L N +++ +GR  L +     +L   LL QL S N VRR G+   ++N CF+  +H +L  ++ +  H++  LS   +E + ++K+ ++P V+     S    ++RE  + ++   V+ LL LC  L  R+ LR+  VY +IR     EPD EI    Y LV+FL RDE+ ++   + ++  ++ E ++E
Sbjct:  151 KIRTLTNSFLEGEPE-PDGVDTATGD---AKWDDEYQYVANILANISQLEQGRAFLLKLRQSTSLAGALLSQLKSPNVVRRRGVTAVLKNLCFDTDNHFYLYDQLDLPTHMMFLLSG-PEEIDEDDKLGMNPVVY-----SQGKKKKRENDRLVRLAAVDCLLLLCTTLSGRKELRRKKVYPIIRNAHLVEPDEEIGDQIYKLVDFLIRDEEGEEPDWNEVRTKSDEEDEKE 372
[Close]
BLAST of mRNA_P-littoralis_Contig193.96.1 vs. uniprot
Match: K3WKR7_GLOUD (Protein HGH1 homolog n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WKR7_GLOUD)

HSP 1 Score: 104 bits (259), Expect = 1.070e-19
Identity = 71/213 (33.33%), Postives = 113/213 (53.05%), Query Frame = 2 
Query:  848 KPRGTDEGVGGGGAAEVLDQWQHCASVLCNAARIPEGRR-ALRRPDPLVALTELLPQLSSANPVRRWGIAGCVRNCCFEELDHPWLLHEVKVVPHLLMRLSDHGDEYNFEEKVILDPRVWRKDEGSDAVSRRREPVQCIKRDVVEALLQLCAILESRQSLRKCGVYFVIREMDKSEPDAEISQVCYNLVNFLQRDEQDKQARIDYLKGLAEAE 1483
            +P G D+  G    A+  D++Q+ A++L N +++ EGR   L+       + ELLPQL S N VRR GIA  VRN CF+  +H + L++   +P  +  L    +  + ++KV L P V+R  E      ++RE  + ++   V+ LL LC     R  LR+  VY ++R     EP+ EI    Y LV+FL RDE  ++   + ++  A A+
Sbjct:  167 EPEGIDQETGD---AKWDDEYQYVANILANISQLAEGRDFLLKNRGNTTLIAELLPQLRSPNVVRRRGIASVVRNLCFDTDNH-FFLYDQLDIPSKMNYLLAGPEPLDEDDKVGLHPSVYRLGE-----KKKREKDKQVRLYAVDCLLLLCTTRNGRNDLRRKKVYPIVRNAHLVEPEEEIGDQIYKLVDFLIRDEDGEEPDWNEIRSKAYAD 370
[Close]
BLAST of mRNA_P-littoralis_Contig193.96.1 vs. uniprot
Match: HGH1_XENTR (Protein HGH1 homolog n=3 Tax=Xenopus tropicalis TaxID=8364 RepID=HGH1_XENTR)

HSP 1 Score: 101 bits (252), Expect = 2.260e-19
Identity = 59/166 (35.54%), Postives = 93/166 (56.02%), Query Frame = 2 
Query:  926 VLCNAARIPEGRRALRRPDPLVALTELLPQLSSANPVRRWGIAGCVRNCCFEELDHPWLL-HEVKVVPHLLMRLSDHGDEYNFEEKVILDPRVWRKDEGSDAVSRRREPVQCIKRDVVEALLQLCAILESRQSLRKCGVYFVIREMDKSEPDAEISQVCYNLVNFL 1420
            +LCN  ++PEGR  +   +  V +  LLP L S + VRR GI G +RNCCF   DH WLL  +V ++P LL+ L+  G+E+  EE   L P +        A  ++RE    I++ ++E +L LCA  + R+ +++ G Y V+RE+   E +  + + C  L+  L
Sbjct:  160 LLCNLTQLPEGRHFILDRNRCV-VQRLLPYLQSGSTVRRGGIVGTLRNCCFSHRDHAWLLGDDVDLLPFLLLPLAG-GEEFTEEEMETLPPDLQYL-----AEDKQREADPDIRKMLIETVLLLCATADGRRLVKQRGTYLVMRELHSWEREPCVKRACEKLIQML 318
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig193.96.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G1I7_ECTSI4.410e-12278.43Protein HGH1 homolog n=2 Tax=Ectocarpus TaxID=2879... [more]
A0A835YVT2_9STRA6.090e-3244.44DUF383 domain-containing protein n=1 Tax=Tribonema... [more]
A0A7S3QJL9_9STRA5.200e-2640.00Protein HGH1 homolog n=1 Tax=Chaetoceros debilis T... [more]
A0A7S2E724_TRICV3.060e-2437.75Hypothetical protein n=1 Tax=Trieres chinensis Tax... [more]
A0A6U1R1M9_CYCTE1.570e-2143.54Hypothetical protein n=1 Tax=Cyclophora tenuis Tax... [more]
G4YZ65_PHYSP8.290e-2030.86Protein HGH1 homolog n=17 Tax=Phytophthora TaxID=4... [more]
A0A2P4WXK1_9STRA8.840e-2032.08Protein HGH1 homolog (Fragment) n=1 Tax=Phytophtho... [more]
A0A3R7J7J1_9STRA9.080e-2031.03Protein HGH1 homolog n=3 Tax=Phytophthora kernovia... [more]
K3WKR7_GLOUD1.070e-1933.33Protein HGH1 homolog n=1 Tax=Globisporangium ultim... [more]
HGH1_XENTR2.260e-1935.54Protein HGH1 homolog n=3 Tax=Xenopus tropicalis Ta... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig193contigP-littoralis_Contig193:336859..352005 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Pylaiella littoralis U1_48 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog2880.D7G1I7
Preferred nameHGH1
PFAMsDUF383,DUF384
Model size2869
Max annot lvl2759|Eukaryota
Hectar predicted targeting categoryother localisation
GOsGO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005737,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044424,GO:0044464
Exons13
Evalue1.14e-108
EggNOG OGsKOG2973@1|root,KOG2973@2759|Eukaryota
DescriptionDomain of unknown function (DUF383)
Cds size801
COG categoryI
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789930.5710032-UTR-P-littoralis_Contig193:336858..3369421680789930.5710032-UTR-P-littoralis_Contig193:336858..336942Pylaiella littoralis U1_48UTRP-littoralis_Contig193 336859..336942 +
1680789930.5812047-UTR-P-littoralis_Contig193:338821..3388391680789930.5812047-UTR-P-littoralis_Contig193:338821..338839Pylaiella littoralis U1_48UTRP-littoralis_Contig193 338822..338839 +
1680789930.652282-UTR-P-littoralis_Contig193:344629..3446861680789930.652282-UTR-P-littoralis_Contig193:344629..344686Pylaiella littoralis U1_48UTRP-littoralis_Contig193 344630..344686 +
1680789930.661171-UTR-P-littoralis_Contig193:345452..3455251680789930.661171-UTR-P-littoralis_Contig193:345452..345525Pylaiella littoralis U1_48UTRP-littoralis_Contig193 345453..345525 +
1680789930.6719024-UTR-P-littoralis_Contig193:346948..3470951680789930.6719024-UTR-P-littoralis_Contig193:346948..347095Pylaiella littoralis U1_48UTRP-littoralis_Contig193 346949..347095 +
1680789930.6820166-UTR-P-littoralis_Contig193:348346..3484571680789930.6820166-UTR-P-littoralis_Contig193:348346..348457Pylaiella littoralis U1_48UTRP-littoralis_Contig193 348347..348457 +
1680789930.6919281-UTR-P-littoralis_Contig193:349553..3496551680789930.6919281-UTR-P-littoralis_Contig193:349553..349655Pylaiella littoralis U1_48UTRP-littoralis_Contig193 349554..349655 +
1680789930.7097285-UTR-P-littoralis_Contig193:349961..3500601680789930.7097285-UTR-P-littoralis_Contig193:349961..350060Pylaiella littoralis U1_48UTRP-littoralis_Contig193 349962..350060 +
1680789930.7216015-UTR-P-littoralis_Contig193:350628..3520051680789930.7216015-UTR-P-littoralis_Contig193:350628..352005Pylaiella littoralis U1_48UTRP-littoralis_Contig193 350629..352005 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789930.5957904-CDS-P-littoralis_Contig193:338839..3390271680789930.5957904-CDS-P-littoralis_Contig193:338839..339027Pylaiella littoralis U1_48CDSP-littoralis_Contig193 338840..339027 +
1680789930.6047533-CDS-P-littoralis_Contig193:340225..3403361680789930.6047533-CDS-P-littoralis_Contig193:340225..340336Pylaiella littoralis U1_48CDSP-littoralis_Contig193 340226..340336 +
1680789930.6141584-CDS-P-littoralis_Contig193:341242..3413441680789930.6141584-CDS-P-littoralis_Contig193:341242..341344Pylaiella littoralis U1_48CDSP-littoralis_Contig193 341243..341344 +
1680789930.6232407-CDS-P-littoralis_Contig193:341947..3420351680789930.6232407-CDS-P-littoralis_Contig193:341947..342035Pylaiella littoralis U1_48CDSP-littoralis_Contig193 341948..342035 +
1680789930.6341586-CDS-P-littoralis_Contig193:342449..3425961680789930.6341586-CDS-P-littoralis_Contig193:342449..342596Pylaiella littoralis U1_48CDSP-littoralis_Contig193 342450..342596 +
1680789930.6431394-CDS-P-littoralis_Contig193:344464..3446291680789930.6431394-CDS-P-littoralis_Contig193:344464..344629Pylaiella littoralis U1_48CDSP-littoralis_Contig193 344465..344629 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig193.96.1prot_P-littoralis_Contig193.96.1Pylaiella littoralis U1_48polypeptideP-littoralis_Contig193 338840..344629 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-littoralis_Contig193.96.1

>prot_P-littoralis_Contig193.96.1 ID=prot_P-littoralis_Contig193.96.1|Name=mRNA_P-littoralis_Contig193.96.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=267bp
MPTFEDVTDTEQPAAAGTSEGGAGASTTVGMSNSSSSSSNCSITRELVEE
TVPFLRDPRPEIRQAAAATAVAASATKEGVALLHECGAVKWLCRISGDVG
TIGKDAVSCLVNVSAEETSVAALEDMCKAGIVSRMMEAVSDEECSPFVRD
LCLQLLANVTRVQVGAIKLAQIGVAGGAREGQYIRRLARWLAEHPAEEGL
AYPVLVGGSRDDARVVDRRAALRDDTRGSDSDSEGEEGGEEREGGARREA
KRDGRRSGGGGGGGGA*
back to top

mRNA from alignment at P-littoralis_Contig193:336859..352005+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-littoralis_Contig193.96.1 ID=mRNA_P-littoralis_Contig193.96.1|Name=mRNA_P-littoralis_Contig193.96.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=15147bp|location=Sequence derived from alignment at P-littoralis_Contig193:336859..352005+ (Pylaiella littoralis U1_48)
CACGCAGTCGCGGCGTACTCGTGTCTCTCTCTCGCTGCTCTCTCTCTCCC
TCCCTTTCTCTCCGGACAACAAAGACAAGTGAAGGTGCGAGAGGTCGCTA
CAGATGAATATGCCCACCCGTTTGAATCTTCCGGGGAACAGGTCCAATCC
ACGCGAGTTGTACGGAGTCTCGCAGAGCAATATCGTGTCCCGAAACCACA
ACAACCACCCAACTTCTTGCTGTGTGTCCCTCGATAGACCATCATGTGCG
GAGCTCGCGGGCAAGTGTAGTTTAGAGCGAGGCGTGTCGAACCAGGAACA
ACCTACCAGCTACCCAGCTACCAATTGAATTGAGCAGCCGAATGCGGCGC
AACTGATTTTTTAAATTCCACGGAACACAGAAGCACCCTGGTATCATACG
TAGGACGGCAGATGACATAAGTTACCACAGATGTTGAGAGCTTGGTTTCT
CCACAGCAAGATGAGTACCATATCAGTGTCGATAATGGTGATGTAATACT
GCTGTAGAAAGATCTCGTCAAGAGCTTTTCCAGAAGACTGGTGCATCGTT
TTTGATGCTGGCACCCTTCACTTTACGGACAAATCGAACTGCTGTGACAG
GTCCAGGGGGTGTGGTATCTTGTGTCACCTACAGTCAGTAGTGCTGGGAC
GGTAACCTTACCTGTACAGCAGCAGTATCCGTCATACGGAGCAAGAGAGA
GCCATCGCCTCGAGCTGTCTTGAACAACGCCACGGACTCTCTCCTTTCCC
CGCCCCGGCCGCCGTATATATCCTGACACATTCTACACGCCATATCGAGC
TCCGCTTTTAAAATTGCACAGCAGCAGCAGTAGGCCTTTTGTTGCCCTGC
GCCGGGTATCATAGCCTGGTGCGACCGGTGTGCTACACGTACTACAGCAG
TCGTGCGGTGTTTGGACCAACGGCACTTCGCCCAGCCCAGCCTCCTCGCT
GACGCACAGCAGTACAAAAGTACACGGATTGAGTTGATTGGCACTTGGCT
CTGTTGTGCGCGCGCAGACAAGAACATGCTTTGGACTCACACGGGCGCTG
AGTCTGTCTGCAGACTACTGCTGCTGTGGAGCAGGTCGCCCGTTTTCGCC
GACTGCCGACTTTTTGCGGACTGCCGAAGCGTATTTTTGAAACATGGCAG
GCAACGCCAGCAATGCTTCAACCTTAACCCTGTCCAAACCAACGGGGAAC
GAAAGGGACGTTGACGGGCGTGTCTGATTTCCTGTTCATGTGGTATCATA
TCACGTGTCATACTCAAATGATGGGTTGATTCTCCTTGTAGTTGTATCCG
GGGAAGGGCAAAGCTACGGCGGTATCGTCGTTGATTGCTGTCAAGCTCGA
CGTTCGACATTCGATATTTTGATCGGGGACCCATGCGTATTCCAGAAGGC
CAATGCAGCATTCCTGGACTAGGAGCGCTCAGAGTGCGTACTTGCAGAAG
TGATGAAAAGGTTGCACGATTTACGTTCTTGTTAGCAGTATTGTGGAACA
AGCTGGACTCAAATCGACACAGCAATCATACCCTCGACCGATTGATTGCT
GTCGCTCGCCGTTGTACTGCTCTTCAGAAAAAAATAAGGAACTGACTGTG
ATGAAATGCTCCGTACAAAATGAAAATGACAGCAGTAGTCACATGATAAA
ACGCCTCTTTGCACTACTGCTTCGTTTTTGAGAAAACCATTTCATTATTC
AGGGGGATAATGCTGAGTCCCTTTTGACAGGGAGGTTTTCCGCACCATTG
CAACAACAGCAGCAGTCCAGCCGAGATGTAAAACGCCCGAAGGAGATAAA
GTTCCACCGTCTATACTTGAAAGAAGTGTTGATCATACTGCTGTACCGTT
GTAAGATACCTTTCCGAATATTTCTCTCTGCAAGGTCAAATAGATATGAT
AGCACTACTTGTTTACTCCTTCTATCTTCTCCCCTCTGTGCGCGTGCGTC
ATGGCATGGCCAGGCCAGGCCAGGTCAGGTGATGCCCACGTTCGAAGATG
TCACCGATACCGAACAACCTGCGGCGGCAGGGACGAGCGAAGGCGGCGCA
GGGGCCAGCACCACCGTTGGCATGAGCAACAGCAGCAGCAGCAGCAGCAA
CTGCAGCATTACTCGCGAGCTTGTCGAGGAAACGGTGCCGTTCTTGCGCG
ACCCGCGACCAGAAATCAGGTGAGAGAAGGAGAAACCCAGCGGCCCCGTG
TGTATCTCACAGGACACACAGGCTTACACCCCGACACCCGAGAGGGGGTC
CCATTGTCGAAGCGGAAGGGTGCAGTGCCGCAATCAGAGCGGCCGCGTGT
GCGTTGCCCGCACCATACACCAGCACACGACAGCGGTCGGTGCTGCTTTA
CTTGTTGCGTACCTTGCATGTTATTCATCGATTCACCCGGTATTTGGTAG
AGTTTTGGGCTTTACAAGCCGACGCTTTGCCGTCAATACAACAGCGTACG
GAATTATCATTCACTGATGCACACATACTGCTGTACGATATCAGCCCACC
TGATGCTGCACGAAACAATAGGGGAATATATAAAAAAAAGAAAACAAAAA
ATGGTTTCCCGTCGGAACAAAATGAAAAAATAAAAAACTGTTAGGGTACC
GCTGGTAGCAGGTGCGCATCCAGTGTCAGGTACGCTGCTTGCTGCTCATC
TGGCCCGTCCTGATTGGGTCTTTGCTTCCGTCTCAAGAGCTTTTCCACTG
GCCGAATTCCACCGTGCGTTATGATGGGAACGACTGCAGTACTACTTTAC
CACTGCTGTGCGCTTGGATGATATTTATTCATTTAGCGTGGACTATTACG
TGTGAAGCGCTGGTGTGTGTGTTTGTCTCATGTGTTTTTGATGGTCTCAA
GGTTTGTTCCATCGGGGCGGGAGTTCCTCACGGACCTCCATGTAAGTCAA
GCACAAACCCGTGCGTATGAGGCGCAGGACTTTGGTCGTCAAGCGATGTT
GGCATCAGAGAAGGACTTTTCTTAAGGCCACTATTCCTGCCGTACTCTCG
CGGTTCCTCCCCGATTTGCGATCGACTTGAATAAACTGCTGTACTTCCAA
GTAGGAATTTGTACAAAACAATTTTGTAGACGTGAGAGAAAAACACACAC
ACACACTCACACACACACACGAAAAAAAAAAAAAAACACACACACACAAT
ACCCGAAAAAGAGCTTTCTTTTATTTATTTCTTTTTTTCTGTTCGTTGCT
GTTCATGTATCTCACGCGAAACTGCTTGCTGCAGGGAGGCAGGCAGGCGA
CCGACTTGGTTCTGCCGTGTGTGTCATCACAGCGTGGTACTTTTTACGTT
TCAAACGAAAAAATTGAACACAAAATGACACGCGCGCACTCACACACACG
CACACGCACACGCACAGGCAAGCCGCGGCGGCGACAGCGGTGGCCGCCTC
TGCCACCAAGGAGGGCGTGGCGCTCCTCCACGAGTGTGGGGCAGTGAAGT
GGCTGTGCCGGATCTCGGGGGACGTCGGGTAAGGGTGTGCGTCTGGCGTC
TTAAGGAGCAGGTGGTGGACATTGACCCCTTTCCGTCAAATAATTTTTCC
CTGCAGATGATTATCATATACAGCCTGCTGTAATTTTCTTGGTTCCATCA
CGAAAGCATGTTTTCATTGTGCGGGTGCAGGAAAGGAAAAAGTTCGGAGA
TTATTTTTTGAACTTACCACAGCGGTTTTCCTTTTTTTTACAGAAGGCAG
GTTTTCTCATTATTTATACATATATAAAAATACTGCTGTACCTGCGTCCG
TGCATATATATATACTTCGTATATTATTTTGTCTTTACAAGGTAAGATGC
TCGGGGATGTGTTTTGGGCATGCCACAGCGGTTTTCCTGATAAACACAAG
GGGATGTATTCCTGGCATGTACTTCAGACGTTTTCCTGATTACACATGGC
AGGGTAGTTGGTTCCCTCATCTGAAAATATTTTCCCCCTGCACAAATGTG
TTTTCATCCGTTCCTCTTTCCAGTGCTTCCATACTTGTCGCCTTCATCGA
GTACCTCCATACTCCGCACCTCCAATACAGCATCTCAGTACTCCGTACCT
CTGCCGGTACAGTACCTCCATGCTCCGCACCTCCAGTACAGCAGTACCTC
AGTACTCCGTACCTCTATTCAGTACCTCCATGCTCCGTACATCTATCAAG
TACCTCCACACTTGCACTCCGTTCCTTTTTCCGGTGCCTCCATACTCCGC
GCCTCCATCCAGTACACAGTACCTCCATGCTCCGCGCCTCCATCAAGTTC
CTTCTTATTCCGACCTCGATGCAGGAATTCGTTGCTGAAGGACGGCTGAC
TGAGTTCCGTGGTCACGCATATGGTATGTATTTACACGCGTTTTTTTTTG
TTTGTTTTTTCTCGCTGTTGCTCTTGCGGGGCAGGACGATCGGCAAGGAC
GCGGTCTCTTGCTTGGTCAACGTCAGCGCCGAAGAAACTTCGGTCGCAGC
TCTCGAGGACATGTGCAAGGCCGGCATCGTCAGCAGGTGCCATGCACTAA
CTGTACGCGTGATGTGACAAGTCGGATGTGTGACCTGTATGTATTCCTAA
AGTGCTGCTTTTTTGCTCTCTTCTTGTTGTTACTTGTTCGTCTCTCCTCA
TGATGCTATTTCTTTCTGGTTCTTTCTGACTTTTTTCTTTCTTCCTTGCT
TGTCTTCCAGTATTTTCTTGTTACTTTCTTGTCATCATGTCTACATATAA
AAATAAAAATATAACACATCTGCACACTCCTCGGAAACAAAAACATTGTT
TTCCTTCACTCCAACCCCCGAATGCTGCCCATCATACGTGGGGCACAACC
TGTTCCGTATGTGGCGTTGATACTCAGCTTTTCGAGTTGGTGGTTCTACC
GACAGCTTCAGTCCGCTTTCCGGGATTTCCAGGGTTTGGGGGAGGCGGTT
TCGGATAGTGAGCGCATGTCTAGCTGTGCATGTCGAGACAACCCGACACC
AAACACGTTGTGCAACTTGGGAGGATTGGCTCTTGCGTGATGTCACCCTA
ACTCGGGCGCAATACACGTGTTTTCTCCATCTACATTCATATTTATTCTG
CGGGTGTCTTGAATATTTTATGCCACTGGGGATTTCCAGGATGATGGAGG
CGGTTTCGGACGAGGAGTGCTCGCCCTTTGTGCGCGACTTGTGTCTCCAG
CTCCTCGCCAACGTCACACGTGTGCAGGTGATACGGTACCAAACCAAAGC
GATGACCACCCCAACTGGCCAAACTTGTCGGTGGCATTCGAAAGCTACGG
CAGTAGACATAACATTGCTCGCCAGGGCAAAATAATCATCGGGGAAGCTG
TTGTTAGAACTTGCTGGTGGTGTGTCACGAAATCTACATGGAGGGGGTTT
ACTGGTGTGCTGTCGAGAGCAGGTACCATTAGGTTCGTGGGCCTCGCCAT
GCTGTCCGGTGGCCGGCTTCCGGTATGGTCTGCCGTGAAATGATTGAGTT
AAGCTAACCCTCCCCACATCACCCCCCCCATCCCGCGTCTCCTTCCCGCT
GGGTTGTGTTTTGGTTTTGGGACTTCAACGCCTAAATAACTATGTGTTGT
GATGGGGCGTGATATGACGCGAATGGATGTAATGCGTCCAGGTCGGAGCG
ATAAAGCTGGCCCAGATTGGTGTTGCCGGGGGCGCGCGGGAGGGGCAGTA
CATCCGGAGGCTGGCACGGTGGCTGGCGGAGCACCCGGCCGAAGAGGGAC
TGGCGTACCCCGTGCTCGTTGGTGGCAGCCGTGATGACGTGAGTTAGTTC
TGCGTTCGGCCACTCTCATGTCAAAGTTAGATATTCTGTCTGAAGATACT
TTGTTGCTGATTTTTTTGCATCCTTTGCGTTATTTTTGAAACTTGTTTTG
GTATCGTTGGGTCAATTTTGGATGCGGCATTGAGTGAGGCATTTTTTTTT
TTTGGACATTCGCCGCGTGGGAATTCAGTCATTGTGTTCCGAAATAAGCA
GTGAAGGTGCCACACTTATTTTAGGGGGTGGGTGGATGGGTGGGGTTACT
TGTTTGTTTGCCTTAAGAGTGATTTTTTTCTGTTCTTTCGGCCCACGCAC
CGTAGATTAGGGACTTTTTCATTTTGTTTCTGCGCTCGTGAGTGCTCTTC
ACGCTATTCTTTCCTATTTCAATTACTTGGTGTGTGGTCCCAAATTGGCT
AGAAATAAGAAAAAAAAAAATCTGTTTTTGCTGCTACGTAAATCTGTAGG
CCAAGGTTGACGGGTGTCTTTTGTGCGTGTGTTTAGTCATTCCAATCTAT
TCCGGACACTAATGTACACCTTTCGATATGAGCTGGGTGCACGCGTCAGC
CGGACGGGGTGAAACAGCAGGAGGTACTGTAGGTCAAAATAGGGTGTTTT
TGTTGTTTTTTGAGCTAGGTCAGCAAGTAAAGGGGGGTATGTACACACGT
ACCCTCAACACGTTTCAACGGGATATGATGCAGCAACACCGCATTGTTCA
GCCAGCCTTTGCCCCCTATCGAACACCCGACTTTTTTTTCGGTTCGATCC
GCATATCCGGTGAGGGTTCGGTTAGTTATACCCCCCTCTCCCGACGAAGG
GCACCATCAAGAATCCCCCCTGTTTTCGTTGTGCCGGGCGCGCGGGGCGG
GCTCATCATCTGAAGTGAGCACACAAGGGTCGTACGGCAGGCACAGCATG
GAGAACAGGGGATTCCCGGACGGTGTCGAAATGCTGTGCCTCGAGCGAGC
CAGCGGTTAGTTACGCTCTCTCGTGTGCCATGATGGAAAAGTCGTCGCAA
CTACAGCATGAAAGCAGAGCGCCACGCTAAAGGAAGGACGAACGTTCGTG
CCATGCCACGGTGACTCAAGCCGTCGCGACCGTCCTTCACACCACCTTGT
CATACCCCCGCCACATGCCAAGGCATGCAGCAAACCTCGTCGGTGATCTC
CGTCGCATGCATGCGTTCTTCCGCGTCCTTCTGCTGCCTGGCCGCCGCCG
CTGCCGCCGCCGCCCACGAGCGGGTTGGTGACGGGAAGGCAGTGTTCTGC
GAAAGGCACGAGACAGGTCGATGCACACATACCGCGTCGTCAGGCAACGC
CGTCGTTTTTTTTTTCGAGGCAGCATTCGAGGACGGCCGCGTGCGCGCGC
GGGGCCTCACCCTCAACTTTTAAGCGGTGCTCTTCGTGCCGTGGCGTAGG
AGTGCGTGATGACTTCCAACGACGGGCGACGGGGTCCCACACGACTGGCA
CAGGGAGGGGGTACTCTGGTTGGGGACCTTCTGCGGGAGGAGGAGGGAGA
GGGGGGGGGGGAGGGGAGGAGGTTGCGGTGGCAATGGATCTGCCGAAGAA
TCACAAGGAGGGGGGAGTCTTGTTGGGGCCCTTCTGCGGGAGGGCGGGGG
GGGGGGTGCGGTGGCACTGGATCTGCCGAAGAGTCATATCGCCGCACAGC
AGTAGTACATCCCATCCGATACATGATTCACGAAAGTGAAGAAAAGTGCC
ATTTTTTTTCGGGGGGGGGTGAGGGGGGTTGGGAATATGAAAATGTATTG
TTTCGCGATGTTATCCGTTTAAATGTGGCAATGGCCCTCCGGCATGATGC
TGCGCGCATGCTGCATCATCGTCGCCCCTTGTCTTTGTCTTGGGGCCCCC
ACACAGGCTCGCGTTGTCGACAGGCGAGCCGCCCTTCGTGACGATACCCG
AGGGAGCGATAGCGATAGCGAAGGCGAGGAGGGCGGGGAGGAGCGGGAGG
GGGGGGCGCGCAGAGAAGCCAAGAGGGACGGACGAAGGAGTGGGGGGGGG
GGGGGCGGCGGAGGTGCTTGACCAGTGGCAGCACTGCGCGAGCGTGCTCT
GCAACGCTGCTAGAATTCCCGAAGGAAGGTGCGACACACACGCACACACA
TATCGTTGGGTGGAGGCGTGACATGCATACATGCTGTACCCCCCCCCCAT
CCAGACACACTGCTGATTGGGTTGGTACTCGTGCAAGGCGGCCACAAGCG
AAGAGGGGATGGGGCAGGACCGTGAAAAATAATCCCACAAACGCGTTTTA
AGAGCGCCTCAAATGTTGGTGATGACTCCCATTACGTATATAGGAGTAGG
ACGGCGCTCCACCTCCGCGCGTGGTAAATACGAATTAATAAATAACGTTC
AAATTGCCAGAATACAAGCAATGGTCGAAGTTCACCCTCGCCCTCCCCCA
CAAACACACACTGCCGTGAGCCGGTTTGAACGCATAATCTACACACAGCC
CAAGGGGGGGGGGGGGGTGGCGGCGATGCCTACCTTTCGGGTATAGATTG
CTCTATAAAGTGGTCAACGTCCAAAATGCACGCATCCCCCCCCCCCCCTT
CACGCGCACGCACACAGCTGTGATGGTAGGATGCCGGCCGCCAAAAGCAA
GGAACACTGTGTGCTTGCAATTTTGTGTAGCCGGTTTCGAACGGGACAAA
TCGACGCCTCGTACTGATTGGTATCATACTTTTGAAGTGCATTTTTTTTC
GTTCTTTCGTTTTTTCTTTTTCTTTTGTTAAGTTTTCCGTCTATTTTATT
TTATTTATTTATTCAAGTTTCGTTTAGGTTTTTCGGGGAGTGGAGTTCCT
TTTTTTCATACAGTGCTCCAACTCGTCTTGTTTTGTTTGTGCAGGCGGGC
GTTGAGGCGACCAGATCCGCTCGTGGCGCTCACCGAGCTTCTCCCTCAAC
TTTCATCGGCGAATCCGGTAAGAATCATAATTTCTTACGTTGACAATACT
ACTCGCTGGGACGATATATTTTTGATCCTGTGACAGCAGTATTAATAGTA
CTGCTTGCTTTATTACAATAATTCTTGCTGCAATACTGTGATATCAATGT
TTGCTGTGACAACAGCAGTTCTTGCTCCAACGATACAGCAGTATTTATCG
CGGCGAAAATAGTTATTACCGTAACATGTCATAGTTTTATCGTTGTAACA
GTAATTCGTGCAGCCGACGAAACATTTTCCTTGTACATGGAACAGAAATC
CATACAGCAATGACGATTCATTGCAGCCTGTAAATCGACGCGCTAAGCCA
TGGAACCGTATTATGAGTGACGTAGGATACCGCACCCCCTGAACTGACTC
TTGTCAGATCGATTGCACCACGGCAAGACGAATTTCAGTGCCGACAATGG
TGGGTACTTTAGGAACGCCTCGCCGAGAGCTTCTGGAAAACTTACCATTT
GGTTTGGCGACCCTTTCGTTACTTACCACTTCGAAGTATTACACTGCTGT
GAAAGTCGTTCCAGGGGGGTATGGTATCTGGCGCCACCTACGGCTGCAAT
TTGATCGTTCGTTTCACAAGATACCAAGCGGCTGCAGCAAGTAAGCCGTA
CTGTGTGTGTTTACAGTGTGGTGGGATTCGATCCCCCCGTGTTTGCTGTG
ATGGTGTGGTGATGCTGCAGCAAGTAAGCCATACTGTGTGTTTTACAGTG
TGGTTGGGATTCGGTCCCCCCGTGTTTGCTGTGATGGTGGTGGTGGTGAT
GATGATGATGATGCTGCTGCTGGTGTTGTTGATTTGGTGAAGATGCAGGC
ATGGTGTTACGAAGATGGTGGTGTACTTCGAAGTAGGTGTGGCGGCTCTC
GTTGTTGGGCACGTAGTGCAAGCTACACGAGTTTCCTTCATTACTGTATT
GCGGTCACGTCTTCCAGAGCGGTTCCCTCGTGGGAGCTTTGGATGTTGAC
TGAACAGGCAAAAGTCGCGAGTCACGCCCCGGCACTAAAATAAGCCCTCA
AGAGAAATGTACTTGGAATATCATATTCCCCCGACGAGGTTGAAGGAGGG
GTCAAACTCTCCTAAACTTACCCGTCCTTGAGCCTCATGCTGGTATATAC
CGGGACACACGATGACTTGCGACCACGCCCAACGGCAGCCGTGATGAGGA
GACCAGGGCCTGGGAGAGGAGAGAGGGATGTGCCTGCTTAATGGCGCAGG
CGACGCTCTTACCGTCTGGGGGGTTTTGTTGTCAATGAGTTACGGCACAG
TGTGACAACATCAACAAGATGAGTTTGCGTGTGCAGAGGGGGGCGGGGGG
TGCCGGTACTGCTGTATTCATATGATACTCGTAACATACACAGCACCAAA
AAAAAAAAAACCAAACGTTTTGAACGGCGCGCGTCCGCAGGTCAGGAGAT
GGGGCATCGCCGGCTGCGTCCGCAACTGCTGCTTCGAGGAGCTGGATCAC
CCGTGGCTGCTGCACGAGGTCAAGGTGGTGCCGCACCTGCTCATGAGGCT
TTCGGACCACGGCGACGAGTACAATTTCGAGGAGAAGGTGTGCGGTGTCC
AACCATCATTTTTTTCTTTTCGGACATGTGTGACCTGTAACGTACATAAG
GTGTTCTTGCTCTCTTTCGCTGCTTTGTTATTGTTGCCTTTTTGATTCAG
GGCCGGAGAGAGCGCTCCGTGAATAAACAAAAGTTTTTAAATAGCTCTGA
AAAGGTTTTGCTTGTACTTGACGGGGCTTGCAGACGGTGGCGGCGTGATG
AGTTCGACTTCGGCGGAGAAGATGCGGCCGCCGGGACGTGCGGTCGGCTG
TTTTCCTTTTTGCTCGTCGTTTTTGGTCCGTGTATGTGTGCGTCTCTTGT
GTGTGGGTGCTCCTTGTTTCTGCTTTTTTCATTCAAGGCCGGACCGGAGA
GTGCCCTCAAGCTGCACTTGTGGTGGCATGCGACCTTTGTTTGTATCGCT
GTCAGCGTACGATGCCGGGGAGAAGGCGAGGAGCCGGCAAGGATTTGTCG
TCCTTGTACGTGTCCCAAGAACTCCGCCGCGTTGTGCTTGGCGGCGTGTG
TGTATGCGTGTTTGCTGTGATCTCAACTTAGCTGGGCATACCAGTCTGCA
CCACCTCAAGGTGCTTGTTGGGCGCGTCAACCGGGGTCCCGACAGACAGG
AAGAATAAAGATTAACACACAGGAGGTTTCTCTTCTGGTACGTACATGGT
TTTGTTAGTCACACAGGAGGAAGGTCAACACACAGGAGTTTTCCTTCCTG
GTACAGTTGTTGTTGTTGGTGGTGTTGTGGTTCTCACGTTAGCTAGCTTG
CCGTTACCACGCAGTCCCTACCCTGGAGGACCCTACAGCCTACGAGTTGT
TGTGATTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTATTG
TTGTTGACTATCACATTAGCTCACCACCAAAGTCTCGCCCGTGCTCACAA
ACCAGGCACATAGCGTCCCAGGAAGAAGGATGCATAATGACGAAAAAAAT
GAAGAAGGCCGTACGTGCCCAAAAAGGGCACGTGCAAGAAAAAACGGGCA
TCGATAACGCCCAACCAACAAGTATCTTCCGTCGGTCGTGCCCGAAATGA
AAAAAATGCAGATGAAAATACAGTCGCGAAAAAACAAAATTGAAAAAAAG
CCGAAAAACATACAATACAAACAATCATGTGAAAGGTGTACCTGTTATCA
TACAGCATAAAAAAGAAAAAGGCGTGTTAACCTGCTTTCGTCATGTCCGT
GTCGTGCAAAATTGTTTGGATCCCCCCCCCTTCCCAAGGTGATCCTGGAC
CCGCGGGTGTGGAGGAAAGACGAAGGGTCTGACGCCGTGTCCAGAAGACG
GGAGCCCGTCCAGTGCATCAAGAGGGACGTCGTCGAGGCTTTGCTACAGG
TGATGACGCCTTGACCTCGACCTTCACCTTTCCCTTCTCGTCCTACCGCA
CCCCGCCCCACCCCAACCCCACCCCAACCCCACCCCAACCCCAACCCACC
CCACCCAAACCCCAACCCCACCCCACTCCACCCCACCCAAAAACTCAGCC
CGAAGGTCACGTGTTCACCACAGTACCACACATGCCGTGCTGCCGCTTGC
CGCGCCAGGCCGTGGTTATACGGGTGCCCGTCACCCCAAAAATTTCGCCC
AAATGTGTCGTGTGCACAACGAAAGGTGTACGTAGTTGTAGACTGGTGCC
CAGAAACAAATGGAATGAAAACTTACACTCACACTCACACTCACACTCAC
ACTCACACACTTAAATCGTGCTGCTGTCGCACGGGTCGTGTCCGGTCGTA
CGATATACTGCAGCGCTGTGTACCGCCTGTTTGTGCCCGTGAACCGAGGA
CTCATGCACTCGTGCACGCTTCTTGCGGATACATGCCTTCAGTCAGCACC
GTCCCACCCCGTTTGTTATTGTTTTATTTTGTTATTCTGCCGTCAAACGG
TACCGTCATTGCCCCCCCCCCTTTCAATTTTTTGTTTTGCCTCTGGCCGT
TCCTGCCTGTAAAAATGATACCCATCATGGGTGGATTTCTCTCCTCGTTG
CTTTTTTTGCTCCTACTTGTACCGCTTGACTCTCTCTTGATTAGTTTATC
ACGAAGCTTTTTTTTTTTTGCCATCAAATGGTACTACACATGCTGCCCTT
CCCCGTTTTCTTTTTTCTTTTTGCTCTCTGTGTATTCGAAAATGGTATCC
ACCGCAGGTTTCTGCCGTCAATTGATACTGCTGCGCCCCCCTCTTTAACT
TTTATTGTCCCTCTTGTTCCTGCCTCCAAGATGAGTGATACCTACCGCTG
GACTCCTGGAACTATATCAATATTTTCCCCTCTTTCTTTCTTCGAGCTAC
GCGTGCACTCTCTTTTCCTTTTTTGTTTTTTTTTTCTGCCGTCAAATGAT
ACACTGGGCCCCCCTGAAGCAGTTTTTTTCTTCCCTTTGTTTTGCCGTCA
AAAACGGTACCTGCCGCTGGACGCTGGACCCCATTTTTCCCTCAGCTGTG
CGCTATTCTGGAATCTCGGCAGTCGCTCCGCAAGTGCGGGGTGTACTTCG
TGATCCGTGAGATGGATAAATCTGAGCCTGATGCCGAAATATCTCAGGTG
AGGGAGATGTCACCACCACACGACAACAGCAGTCCAAAGTTGTTGCTGGG
TGTTGTTTCTTTCTGTGCTTTAAAATTTCTTCTGAGCTGTGCGTGCATTG
AACAGTCGTTATGACGTCTGCGATCCACTGCCCCCCCGCCCTTGTAGTAA
TCCAACGACGGTGATCACGAGTGGGAGCGATCGGCGAAAGAAAAAAAGTT
GTTCTCTTGTTATCCCACCAATTTCGTTTGAGGCTTAACAACTCCGCCCC
CCCCCCCCCACCCCCTCCCATCTCCCGGTGGTCGAACGAACGCCTCCTCG
CAGGTCTGCTACAATCTGGTAAACTTCTTGCAGAGGGACGAGCAAGACAA
GCAGGCCCGCATCGACTACCTTAAGGGCCTTGCGGAGGCGGAGGCCAAAG
AGGTACCGTATGATTCGATACGATACAAGCACGGTATGATATACTTCAGT
ATAATGTACCCGTACAACAAAAGTTGTTTTCACTCATTCTTTTTGCTTTT
CTGTTTGGTTTCAGACGAAATTAAACCCACACACAGGCATCGATCAATCA
ACCAATCAATCCTTGTTTCCTTCCTTCTCCGCGACACGTGATGATGGTAG
TGTAGTTAGACACGTCGTTGTGACGCAATTACACCCTTCTCCTTTTTGCG
ATGTACAAACGATCGAAGTCTCTCGGCTTTTATCCTGACTGGCATCATCC
TCAGCTCTCATATCGATTGATTGCAGCTATCATACAAACAGCAGTGGCCA
GCGAGCCAGCCCCCTGGCGATTTGCGCCCACTCGTTCTCCACTCATCACT
GTTGTCAATCACTTCATTGCACCTATTATGACCACCTCCCCACTACAAGT
ACGTGAGAGCACGTGTGCCTGCACCCATCCGTCTCCCCCGTGGCCTCGAA
ATTATCTCCACTGGATGGATGTTTTTTTTTTCTTATTTTCGTTGTATGAT
ACCGCGCGCCGTCGAAACAGGAGTCAGCAGGAGGAGAACCGTCACCCGCG
GCACCGCCGCCGGCGCCATCATCCGGGATGGAAATTATTCCCCCACCGAC
GGCGCCCCCGGGGTCGACGGCCGACAGGACGGCCTACCTCCGCGACAAAC
TCGCGGCGGAGAAGGTTGCCGCCGGCGGTGGTGGTGGAACGGCCAAGGTC
AAGGGCGGGAAGAAAGGGGCGGGGGGGGAGGAGGGGGGGGGGAGGGGGTT
GAAGAGTTCGTGGGGGAGAAAGGGGGCGATGCGATGATTGAGATGCTGTC
CGCTTTCGATGACGTATCGGACGACGAAAAGTAAACGAAACAAAAAGAAA
AGTAAATTTTCAGGTGTATTTTTTTTTTTTTGGTTCGTTGGTCGATATTG
TTTGCTGTTGCAGCAGTGAGTATTGTACGGACGCGTTGGGGTTGTCACGA
ATCGTACCGAAGAAAGAGTTGATTGGCTTCGGGATGGAAGGCGAGCGTGG
TAGGGTAGGAAGTCGGTGGGGAACGGTGGCGCGCATAAGTGGGTGAGATC
GAGGTGGCGTCCTTGGCCTTTGGCGACTCTCGCGGCCGTGGTGTATGAAC
AGGCACAGGTCAAGATGTGCCCCGTATCAACGAAACACACCCGTTCCAAT
CAAAGAGGGAGGGAGGGAAATAGTCAACAGCCTGTACAAGACAAGCTTGT
CGGCTAAACCAGCCAGTGTGCCTTCGCCGATGCAAGCGTCGTCCCCAGGA
AGGTCGGCCCCAAACGTGACCTTTGCTTTAGGGTTAAGGGGGCCCCGCAG
CGACGCTGTGGAGGCACGTAGGTGTTGCTTCAATACTCCAGGGCAAGTCC
AAGTACAACGGCAGTGAAGTGAAAGTTAAAGTTGAGTGCCCCTCCCCCCC
CGGTAATGCCCTCCCCCCCGTCAACTTTTCAGGCGAAAAGTTTGGAAACT
TTGGTTTGCCCCCGAGAACGGAGaaAAAAAAAGCCCCCCCCGTTCCGTGA
TTTCCACCCCCCTCCCCTCTCTTCCCGTAGATATTTTCATAGACTTCCCC
CGGGGTTGATTGATTTTCCAACACTTTTTGCGCTTTCGGCATCGTTGTAC
ATGGGTGTGGGGGCTGACACGGCTCTATGTGCGTTTAGCCCTAGGAGGGC
ACATGGGGTAATTCATGTGGATTGCCGGCAGTGGCCGGTCTTGGATGATA
TGCAACTGCACGTACATGCCCTGTACGATTTCGCCAAGTCTTCGAGTGTT
GATTCTAGTTGATTGGCATTGCGGAGATGTTGATGTCCACCGCTCGAACA
CCGAGAACAGCATGGCGTCAGAGCAAAGACGCGCGGGCATCGAAACCAAA
ATTTTACTGTGTTTTATTCCATCGTCCGAAAATAGTTCCGGCTGAAA
back to top

Coding sequence (CDS) from alignment at P-littoralis_Contig193:336859..352005+

>mRNA_P-littoralis_Contig193.96.1 ID=mRNA_P-littoralis_Contig193.96.1|Name=mRNA_P-littoralis_Contig193.96.1|organism=Pylaiella littoralis U1_48|type=CDS|length=801bp|location=Sequence derived from alignment at P-littoralis_Contig193:336859..352005+ (Pylaiella littoralis U1_48)
ATGCCCACGTTCGAAGATGTCACCGATACCGAACAACCTGCGGCGGCAGG
GACGAGCGAAGGCGGCGCAGGGGCCAGCACCACCGTTGGCATGAGCAACA
GCAGCAGCAGCAGCAGCAACTGCAGCATTACTCGCGAGCTTGTCGAGGAA
ACGGTGCCGTTCTTGCGCGACCCGCGACCAGAAATCAGGCAAGCCGCGGC
GGCGACAGCGGTGGCCGCCTCTGCCACCAAGGAGGGCGTGGCGCTCCTCC
ACGAGTGTGGGGCAGTGAAGTGGCTGTGCCGGATCTCGGGGGACGTCGGG
ACGATCGGCAAGGACGCGGTCTCTTGCTTGGTCAACGTCAGCGCCGAAGA
AACTTCGGTCGCAGCTCTCGAGGACATGTGCAAGGCCGGCATCGTCAGCA
GGATGATGGAGGCGGTTTCGGACGAGGAGTGCTCGCCCTTTGTGCGCGAC
TTGTGTCTCCAGCTCCTCGCCAACGTCACACGTGTGCAGGTCGGAGCGAT
AAAGCTGGCCCAGATTGGTGTTGCCGGGGGCGCGCGGGAGGGGCAGTACA
TCCGGAGGCTGGCACGGTGGCTGGCGGAGCACCCGGCCGAAGAGGGACTG
GCGTACCCCGTGCTCGTTGGTGGCAGCCGTGATGACGCTCGCGTTGTCGA
CAGGCGAGCCGCCCTTCGTGACGATACCCGAGGGAGCGATAGCGATAGCG
AAGGCGAGGAGGGCGGGGAGGAGCGGGAGGGGGGGGCGCGCAGAGAAGCC
AAGAGGGACGGACGAAGGAGTGGGGGGGGGGGGGGCGGCGGAGGTGCTTG
A
back to top