mRNA_P-littoralis_Contig193.84.1 (mRNA) Pylaiella littoralis U1_48

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-littoralis_Contig193.84.1
Unique NamemRNA_P-littoralis_Contig193.84.1
TypemRNA
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Homology
BLAST of mRNA_P-littoralis_Contig193.84.1 vs. uniprot
Match: D7FZG7_ECTSI (Exonuclease I Exo1 n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZG7_ECTSI)

HSP 1 Score: 301 bits (771), Expect = 2.770e-94
Identity = 166/325 (51.08%), Postives = 210/325 (64.62%), Query Frame = 1
Query:    7 AAQDDAFGQIQRALCEGVVRESRLEDSQEARLNVMRKLQTAHNMFRHAVVWNPIADTLQHFSGSAPAQSIATDTGTLAMSSVARRIAWGEVSPSTGLEWVPVIAGAPPAASTPTAEPSRGTPTLLGDEDAQKRGSSGAPGGTSGTTR-KNPRRTVSHDTNNYSRHGFSRLPDDGEDFSRWTVPQLREFLSVFRCLDNAGTSGLNKALLSTIAGDVVRMIRKCGLLDTNLAFRHPVADTTSFEDKERMIMPDLPAISHRIPEWSVVRRHLPEISKSFILQFIQRVNPLAQEGSRVWYRALQRTMDMGNLGKIWAVPAQEGVMWLGT 978
            AA    F  +   L   ++ ESR ED+  AR     +L+  H M    VVW+P++  LQH SG+   + I   TGTL +S +A R+A G+V P TG EW P + G   A      E +         E A  R     P  +S  +R + P+     DTNNY  HGFSRLP + ED+++WTVP+LREFLSVFRCLD AGTSG  KALL+ +AGDVVR+IR CG+LDTNLAFRHPV D +SFE+KE  +MPDLPA   RI EWS +RR+LPEISK+ I +F+  VN LA EGSR+WYR+LQR +DMGNL + WAVPA  G+MW+GT
Sbjct:  189 AASLQPFDAVVGDLASRLLVESREEDTPAARREFEIRLRACHTMVTQPVVWDPLSGELQHLSGAPTREEITRHTGTLELSPLASRVARGDVCPLTGREWDPPL-GTAQAKGQAVGEDAGRQKKRATPETASTR----PPNASSRASRARGPQ-----DTNNYREHGFSRLPGETEDYTKWTVPKLREFLSVFRCLDTAGTSGFKKALLAQMAGDVVRLIRSCGVLDTNLAFRHPVPDLSSFEEKEARLMPDLPATGLRIKEWSAMRRYLPEISKAVISRFLGEVNKLAGEGSRLWYRSLQRVLDMGNLSRFWAVPAAGGIMWIGT 503          
BLAST of mRNA_P-littoralis_Contig193.84.1 vs. uniprot
Match: A0A6H5KVY6_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KVY6_9PHAE)

HSP 1 Score: 306 bits (785), Expect = 7.690e-94
Identity = 166/319 (52.04%), Postives = 214/319 (67.08%), Query Frame = 1
Query:   25 FGQIQRALCEGVVRESRLEDSQEARLNVMRKLQTAHNMFRHAVVWNPIADTLQHFSGSAPAQSIATDTGTLAMSSVARRIAWGEVSPSTGLEWVPVIAGAPPAASTPTAEPSRGTPTLLGDEDAQKRGSSGAPGGTSGTTR-KNPRRTVSHDTNNYSRHGFSRLPDDGEDFSRWTVPQLREFLSVFRCLDNAGTSGLNKALLSTIAGDVVRMIRKCGLLDTNLAFRHPVADTTSFEDKERMIMPDLPAISHRIPEWSVVRRHLPEISKSFILQFIQRVNPLAQEGSRVWYRALQRTMDMGNLGKIWAVPAQEGVMWLGT 978
            F  +   L   ++ ES+ ED+  A   V  +L+  H MF   VVWNP++  LQH SG+  ++ I   TGTL +S +A  +A G+V P TG EW P + G   A      E +      +  E A  R     P  +S T+R + P+     +TNNY  HGFSRLP + ED+++WTVP+LREFL+VFRCLDNAGTSG NKALL+ +AGDVVR+IR CG+LDTNLAFRHPV D +SFE+KE  +MPDLPA   RI EWS +RRHLPEISK+ IL+F++ VN LA EGSR+WYR+LQR +DMGNL + WAV A  G+MW+GT
Sbjct:  508 FDAVVGDLASRLLVESKEEDTPAAWREVEIRLRACHTMFTQPVVWNPLSGELQHLSGAPTSEDITRHTGTLELSPLASGVARGDVCPLTGGEWDPPL-GTAQAKGQAAGEDASRPKKKVTPEIASSR----PPNASSRTSRARGPQ-----ETNNYRAHGFSRLPGETEDYTKWTVPKLREFLTVFRCLDNAGTSGFNKALLAQMAGDVVRLIRSCGVLDTNLAFRHPVPDLSSFEEKEARLMPDLPATGLRIKEWSAMRRHLPEISKAVILRFMREVNKLAGEGSRLWYRSLQRVLDMGNLSRFWAVSAAGGIMWIGT 816          
BLAST of mRNA_P-littoralis_Contig193.84.1 vs. uniprot
Match: D7G3Y3_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G3Y3_ECTSI)

HSP 1 Score: 278 bits (711), Expect = 1.690e-89
Identity = 149/285 (52.28%), Postives = 192/285 (67.37%), Query Frame = 1
Query:  136 MFRHAVVWNPIADTLQHFSGSAPAQSIATDTGTLAMSSVARRIAWGEVSPSTGLEWVPVIAGAPPAASTPTAEPSRGTPTLLGDEDAQKRGSSGAPGGT-----SGTTRKNPRRTVSHDTNNYSRHGFSRLPDDGEDFSRWTVPQLREFLSVFRCLDNAGTSGLNKALLSTIAGDVVRMIRKCGLLDTNLAFRHPVADTTSFEDKERMIMPDLPAISHRIPEWSVVRRHLPEISKSFILQFIQRVNPLAQEGSRVWYRALQRTMDMGNLGKIWAVPAQEGVMWLG 975
            MF +AVVW+P+ +TL+HFSG+A + +I  DTGTL  SSVA  IA GEVSP+TG  W      APP   T  A+  R      G +                   S +  K  R+ V+HDTNNY +HGFSRLP   EDF++WTV QLREFLSVFRCLD+AG S   K  L  +AG +V MI+KCGLL++N AFRHPV D +SF+DKERM MP+LP    RI  +  +++HLPE+SKS ILQF+++VNP++ EGSRVWYR +Q+  DMGNL ++W VPA+ G+M+LG
Sbjct:    1 MFHNAVVWDPLKNTLRHFSGAASSLAITNDTGTLEFSSVASGIASGEVSPTTGQVW------APPLLETRIAQEFRRATRRPGSQPPXXXXXXXXXXXXXXXXXSTSRNKRSRKAVTHDTNNYHKHGFSRLPGAEEDFNKWTVAQLREFLSVFRCLDHAGHSAYLKGPLVELAGQIVAMIKKCGLLNSNQAFRHPVPDLSSFQDKERMAMPELPGPRSRISGFEHLQQHLPEMSKSVILQFLRQVNPISGEGSRVWYRGMQKVTDMGNLNRLWGVPAKNGLMYLG 279          
BLAST of mRNA_P-littoralis_Contig193.84.1 vs. uniprot
Match: A0A6H5KFX7_9PHAE (Exonuclease 1 n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KFX7_9PHAE)

HSP 1 Score: 294 bits (752), Expect = 2.170e-89
Identity = 160/310 (51.61%), Postives = 207/310 (66.77%), Query Frame = 1
Query:   58 VVRESRLEDSQEARLNVMRKLQTAHNMFRHAVVWNPIADTLQHFSGSAPAQSIATDTGTLAMSSVARRIAWGEVSPSTGLEWVPVIAGAPPAASTPTAEPSRGTPTLLGDEDAQKRGSSGAPGGTSGTT----RKNPRRTVSHDTNNYSRHGFSRLPDDGEDFSRWTVPQLREFLSVFRCLDNAGTSGLNKALLSTIAGDVVRMIRKCGLLDTNLAFRHPVADTTSFEDKERMIMPDLPAISHRIPEWSVVRRHLPEISKSFILQFIQRVNPLAQEGSRVWYRALQRTMDMGNLGKIWAVPAQEGVMWLG 975
            VV++S+ E++  A      KL+ AHNMF +AVVW+P+ +TL+HFSG+A + +I  DTGTL  SSVA  IA GEVSP+TG  W      APP   T  A+  R      G +                       K  R  V+HDTNNY +HGFSRLP   EDF++WTV QLREFLSVFRCLD+AG S   K  L+ +AG VV MI+KCGLL++N AFRHPV D +SF+DKERM+MP+LP    RI  +  +++HLPE+SKS ILQF+ +VNP++ EGSRVWYR +Q+ MDMGNL ++W VPA+ G+M+LG
Sbjct:  314 VVQDSKEEETPAALEEAEEKLRRAHNMFHNAVVWDPLKNTLRHFSGAASSLAITKDTGTLEFSSVASGIASGEVSPTTGQVW------APPLLETRIAQELRRATRRPGSQPPXXXXXXXXXXXXXXXXXXXXNKRSRNAVTHDTNNYHKHGFSRLPGAEEDFNKWTVAQLREFLSVFRCLDHAGHSAYLKGPLAELAGQVVAMIKKCGLLNSNQAFRHPVPDLSSFQDKERMVMPELPGPRSRISGFEHLQQHLPEMSKSVILQFLGQVNPISGEGSRVWYRGMQKVMDMGNLNRLWGVPAKNGLMYLG 617          
BLAST of mRNA_P-littoralis_Contig193.84.1 vs. uniprot
Match: D7FZU5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZU5_ECTSI)

HSP 1 Score: 285 bits (730), Expect = 5.870e-89
Identity = 148/281 (52.67%), Postives = 189/281 (67.26%), Query Frame = 1
Query:  136 MFRHAVVWNPIADTLQHFSGSAPAQSIATDTGTLAMSSVARRIAWGEVSPSTGLEWVPVIAGAPPAASTPTAEPSRGTPTLLGDEDAQKRGSSGAPGGTSGTTRKNPRRTVSHDTNNYSRHGFSRLPDDGEDFSRWTVPQLREFLSVFRCLDNAGTSGLNKALLSTIAGDVVRMIRKCGLLDTNLAFRHPVADTTSFEDKERMIMPDLPAISHRIPEWSVVRRHLPEISKSFILQFIQRVNPLAQEGSRVWYRALQRTMDMGNLGKIWAVPAQEGVMWLGT 978
            + R  VVWNP++  LQH SG++  + I   TGTL +S +A R+A G++   TG EW P +  A        A+  R        E A  R S+         + +  R     DTNNY  HGFSRLP + ED+++WTVP+LREFLSVFRCLDN GTSGLNKALL+ +AGDVVR+IR CG+LDTNLAFRHP  D +SFE+KE  +MPDLPA   RI EWS +RR+LPEISK+ IL+F++ VN LA +GSR+WYR+LQR +DMGNL + W V A   +MW+GT
Sbjct:  257 LLRGPVVWNPLSGELQHLSGASTREEITRHTGTLELSPLASRVARGDICLLTGREWDPPLGTAQGKGQAAGADAGRQKKKAT-PETASSRPSN--------ASSRASRARGPQDTNNYREHGFSRLPGETEDYTKWTVPKLREFLSVFRCLDNTGTSGLNKALLAQMAGDVVRLIRSCGVLDTNLAFRHPFPDLSSFEEKEARLMPDLPATGLRIKEWSAMRRYLPEISKAVILRFMREVNKLAGKGSRLWYRSLQRVLDMGNLSRFWTVQAAGSIMWIGT 528          
BLAST of mRNA_P-littoralis_Contig193.84.1 vs. uniprot
Match: D7FQM4_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FQM4_ECTSI)

HSP 1 Score: 279 bits (714), Expect = 3.380e-88
Identity = 157/309 (50.81%), Postives = 205/309 (66.34%), Query Frame = 1
Query:   58 VVRESRLEDSQEARLNVMRKLQTAHNMFRHAVVWNPIADTLQHFSGSAPAQSIATDTGTLAMSSVARRIAWGEVSPSTGLEWVPVIAGAPPAASTPTAEPSRGTPTLLGDEDAQKRGSSGAPGGTSGTTR-KNPRRTVSHDTNNYSRHGFSRLPDDGEDFSRWTVPQLREFLSVFRCLDNAGTSGLNKALLSTIAGDVVRMIRKCGLLDTNLAFRHPVADTTSFEDKERMIMPDLPAISHRIPEWSVVRRHLPEISKSFILQFIQRVNPLAQEGSRVWYRALQRTMDMGNLGKIWAVPAQEGVMWLGTR 981
            VV++S+ E++  A      KL+ + NMF +AVVW+P+ +TL+HFS +A + +I  DTGTL  SSVA  IA GEVSP+TG  W      APP   T  A+  R      G +                T R K  R+ V+HDTNNY +HGFSRLP   EDF++WTV QLREFLSVFRCLD+AG S   K  L+ +AG VV MI+KCGLL++N AFRHPV D +SF+DKERM MP LP    RI  +  +++HLPE+SKS ILQF+++VNP++ EGSRV    +Q+ MDMGNL ++W VPA+ G+M+LG R
Sbjct:   91 VVQDSKEEETPAALEEAEEKLRRSQNMFHNAVVWDPLKNTLRHFSCAASSLAITKDTGTLEFSSVASGIASGEVSPTTGQVW------APPLLETRIAQEFRRATRRAGSQMPPXXXXXXXXXXDQSTGRNKRSRKAVTHDTNNYRKHGFSRLPGAEEDFNKWTVAQLREFLSVFRCLDHAGHSAYLKGPLAELAGQVVAMIKKCGLLNSNQAFRHPVPDLSSFQDKERMAMPGLPGPRSRISGFEHLQQHLPEMSKSVILQFLRQVNPISGEGSRV---GMQKVMDMGNLNRLWGVPAKNGLMYLGMR 390          
BLAST of mRNA_P-littoralis_Contig193.84.1 vs. uniprot
Match: D7G0K2_ECTSI (Exonuclease 1 n=3 Tax=Ectocarpus TaxID=2879 RepID=D7G0K2_ECTSI)

HSP 1 Score: 289 bits (740), Expect = 6.290e-88
Identity = 160/319 (50.16%), Postives = 204/319 (63.95%), Query Frame = 1
Query:   25 FGQIQRALCEGVVRESRLEDSQEARLNVMRKLQTAHNMFRHAVVWNPIADTLQHFSGSAPAQSIATDTGTLAMSSVARRIAWGEVSPSTGLEWVPVIAGAPPAASTPTAEPSRGTPTLLGDEDAQKRGSSGAPGGTSGTTR-KNPRRTVSHDTNNYSRHGFSRLPDDGEDFSRWTVPQLREFLSVFRCLDNAGTSGLNKALLSTIAGDVVRMIRKCGLLDTNLAFRHPVADTTSFEDKERMIMPDLPAISHRIPEWSVVRRHLPEISKSFILQFIQRVNPLAQEGSRVWYRALQRTMDMGNLGKIWAVPAQEGVMWLGT 978
            F  +   L   ++ ESR ED+   R     +L+  H MF   VVWNP++  LQH SG+   + I    GT  +S +A R+A  +  P TG EW P + G   A      E +         E A  R     P  +S  +R + P+     DTNNY  HGFSRLP + ED+++ TVP+LREFLSVFRCLDNAGTSG NKALL+ +AGDVVR+IR CG+LDTNLAFRHPV D +SFE+KE  +M DLPA   RI EWS +RR+LPEISK+ IL+F+  V  LA EGSR+WYR++QR +DMGNL + WAVPA  G+MW+GT
Sbjct:  263 FDAVVGYLASRLLVESREEDTPAVRREFEIRLRACHTMFTQPVVWNPLSGELQHLSGAPTREEITRHAGTSELSPLASRVARRDACPLTGREWDPPL-GTAQAKGQAVGEDAGRQKKRATPETASTR----PPNASSRASRSRGPQ-----DTNNYREHGFSRLPAETEDYTKLTVPKLREFLSVFRCLDNAGTSGFNKALLAQMAGDVVRLIRSCGVLDTNLAFRHPVPDLSSFEEKEARLMTDLPATGLRIKEWSAMRRYLPEISKAVILRFMGEVKKLAGEGSRLWYRSVQRVLDMGNLSRFWAVPAAGGIMWIGT 571          
BLAST of mRNA_P-littoralis_Contig193.84.1 vs. uniprot
Match: D7G6L7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G6L7_ECTSI)

HSP 1 Score: 192 bits (489), Expect = 1.550e-55
Identity = 119/266 (44.74%), Postives = 154/266 (57.89%), Query Frame = 1
Query:   58 VVRESRLEDSQEARLNVMRKLQTAHNMFRHAVVWNPIADTLQHFSGSAPAQSIATDTGTLAMSSVARRIAWGEVSPSTGLEWVPVIAGAPPAAS--TPTAEPSRGTPTLLGDEDAQKRGSSGAPGGTSGTTRKNPRRTVSHDTNNYSRHGFSRLPDDGEDFSRWTVPQLREFLSVFRCLDNAGTSGLNKALLSTIAGDVVRMIRKCGLLDTNLAFRHPVADTTSFEDKERMIMPDLPAISHRIPEWSVVRRHLPEISKSFILQFIQ 849
            VV++S+ E++  A      KL+ +HNMF +AVVW P+ +TL+HFS +A + +I  DTGTL  S VA  IA GEVSP+TG  W P +  A  A      T  P    P               + G       K  R+ V+HDTNNY +HGFSRLP   EDF++WTV QLREFLSV                       VV MI+KCGLL++N AFRHPV D +SF+DKERM MP+LP    RI  +  +++HLPE+SKS ILQF++
Sbjct:   91 VVQDSKEEETPAALEEAEEKLRRSHNMFHNAVVWGPLKNTLRHFSCAASSLAITKDTGTLEFSYVASGIASGEVSPTTGQVWAPPLLEARMAQEFRRATRRPGSQPPXXXXXXXXXXXXXDQSTG-----RNKRSRKAVTHDTNNYHKHGFSRLPGAEEDFNKWTVAQLREFLSV----------------------QVVAMIKKCGLLNSNQAFRHPVPDLSSFQDKERMAMPELPGPRSRISGFEHLQQHLPEMSKSVILQFLR 329          
BLAST of mRNA_P-littoralis_Contig193.84.1 vs. uniprot
Match: D7G4G5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G4G5_ECTSI)

HSP 1 Score: 177 bits (450), Expect = 9.950e-48
Identity = 89/168 (52.98%), Postives = 109/168 (64.88%), Query Frame = 1
Query:  475 DTNNYSRHGFSRLPDDGEDFSRWTVPQLREFLSVFRCLDNAGTSGLNKALLSTIAGDVVRMIRKCGLLDTNLAFRHPVADTTSFEDKERMIMPDLPAISHRIPEWSVVRRHLPEISKSFILQFIQRVNPLAQEGSRVWYRALQRTMDMGNLGKIWAVPAQEGVMWLGT 978
            DTNNY  HGFSRLP + ED+++WTVP+LREF+SV+RCLDNAGTSG NKALL+ +AGDVVR+IR CG+LDTNLAFRHPV D +SFE++E  +MPDLPA   RI   + V                                     +DMGNL + WAVPA  G+MW+GT
Sbjct:  361 DTNNYREHGFSRLPGETEDYTKWTVPKLREFVSVYRCLDNAGTSGFNKALLAQMAGDVVRVIRSCGVLDTNLAFRHPVPDLSSFEEEEARLMPDLPATGLRIKIAAAV-------------------------------------LDMGNLSRFWAVPAAGGIMWIGT 491          
BLAST of mRNA_P-littoralis_Contig193.84.1 vs. uniprot
Match: D7G2U9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G2U9_ECTSI)

HSP 1 Score: 142 bits (358), Expect = 1.310e-38
Identity = 64/107 (59.81%), Postives = 86/107 (80.37%), Query Frame = 1
Query:  655 MIRKCGLLDTNLAFRHPVADTTSFEDKERMIMPDLPAISHRIPEWSVVRRHLPEISKSFILQFIQRVNPLAQEGSRVWYRALQRTMDMGNLGKIWAVPAQEGVMWLG 975
            MI+KCGLL++N AFRHP+ D +SF+DKERM MP+LP    RI  +   ++HLPE+SKS ILQF ++VNP++ EGSRVWYR +Q+ MDMGNL ++W VPA+ G+M+LG
Sbjct:    1 MIKKCGLLNSNQAFRHPIPDLSSFQDKERMAMPELPGPRSRISGFEHPQQHLPEMSKSVILQFPRQVNPISGEGSRVWYRGMQKVMDMGNLNRLWRVPAKNGLMYLG 107          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig193.84.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 11
Match NameE-valueIdentityDescription
D7FZG7_ECTSI2.770e-9451.08Exonuclease I Exo1 n=2 Tax=Ectocarpus siliculosus ... [more]
A0A6H5KVY6_9PHAE7.690e-9452.04Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more]
D7G3Y3_ECTSI1.690e-8952.28Uncharacterized protein n=2 Tax=Ectocarpus silicul... [more]
A0A6H5KFX7_9PHAE2.170e-8951.61Exonuclease 1 n=1 Tax=Ectocarpus sp. CCAP 1310/34 ... [more]
D7FZU5_ECTSI5.870e-8952.67Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7FQM4_ECTSI3.380e-8850.81Uncharacterized protein n=2 Tax=Ectocarpus silicul... [more]
D7G0K2_ECTSI6.290e-8850.16Exonuclease 1 n=3 Tax=Ectocarpus TaxID=2879 RepID=... [more]
D7G6L7_ECTSI1.550e-5544.74Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7G4G5_ECTSI9.950e-4852.98Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7G2U9_ECTSI1.310e-3859.81Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig193contigP-littoralis_Contig193:302409..304226 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Pylaiella littoralis U1_48 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start0
Seed ortholog2880.D7G495
PFAMsXPG_I,XPG_N
Model size985
Max annot lvl2759|Eukaryota
KEGG koko:K10746
KEGG Pathwayko03430,map03430
Hectar predicted targeting categoryother localisation
Exons3
Evalue7.24e-90
EggNOG OGsCOG0258@1|root,KOG2518@2759|Eukaryota
Description5'-3' exodeoxyribonuclease activity
Cds size984
COG categoryL
BRITEko00000,ko00001,ko01000,ko03032,ko03400
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680789930.3204699-CDS-P-littoralis_Contig193:302408..3028191680789930.3204699-CDS-P-littoralis_Contig193:302408..302819Pylaiella littoralis U1_48CDSP-littoralis_Contig193 302409..302819 -
1680789930.3318126-CDS-P-littoralis_Contig193:303076..3034201680789930.3318126-CDS-P-littoralis_Contig193:303076..303420Pylaiella littoralis U1_48CDSP-littoralis_Contig193 303077..303420 -
1680789930.3415194-CDS-P-littoralis_Contig193:303997..3042261680789930.3415194-CDS-P-littoralis_Contig193:303997..304226Pylaiella littoralis U1_48CDSP-littoralis_Contig193 303998..304226 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig193.84.1prot_P-littoralis_Contig193.84.1Pylaiella littoralis U1_48polypeptideP-littoralis_Contig193 302409..304226 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-littoralis_Contig193.84.1

>prot_P-littoralis_Contig193.84.1 ID=prot_P-littoralis_Contig193.84.1|Name=mRNA_P-littoralis_Contig193.84.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=328bp
DQAAQDDAFGQIQRALCEGVVRESRLEDSQEARLNVMRKLQTAHNMFRHA
VVWNPIADTLQHFSGSAPAQSIATDTGTLAMSSVARRIAWGEVSPSTGLE
WVPVIAGAPPAASTPTAEPSRGTPTLLGDEDAQKRGSSGAPGGTSGTTRK
NPRRTVSHDTNNYSRHGFSRLPDDGEDFSRWTVPQLREFLSVFRCLDNAG
TSGLNKALLSTIAGDVVRMIRKCGLLDTNLAFRHPVADTTSFEDKERMIM
PDLPAISHRIPEWSVVRRHLPEISKSFILQFIQRVNPLAQEGSRVWYRAL
QRTMDMGNLGKIWAVPAQEGVMWLGTR*
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mRNA from alignment at P-littoralis_Contig193:302409..304226-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-littoralis_Contig193.84.1 ID=mRNA_P-littoralis_Contig193.84.1|Name=mRNA_P-littoralis_Contig193.84.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=1818bp|location=Sequence derived from alignment at P-littoralis_Contig193:302409..304226- (Pylaiella littoralis U1_48)
GATCAGGCCGCTCAAGATGATGCCTTCGGGCAAATCCAGAGAGCACTGTG CGAAGGCGTTGTCCGAGAGTCGAGATTGGAGGACAGTCAGGAAGCGAGGT TGAATGTGATGAGGAAGTTACAAACAGCTCACAACATGTTTCGACACGCC GTCGTGTGGAACCCGATTGCGGATACTCTACAGCACTTCTCCGGGTCGGC TCCGGCGCAAAGCATCGCCACAGACACAGGTCAGGATGACTGCAACAAAC CTCGCTGCTGCCTACATTGTTACCTACAGCGGTCTACCTCCGTAACGAAT AATATCGCACGACATATACACCCCTATGTACGCCGTCACCAACATGAACC GTTGTCATGTCGTAGGGATGACATCGCTTTGACCGCCATATGCCGTATAG GACAACGAAAGAAAGTATCAAAACAGTGGCTCTTGCATGGAAGCAATGGA GCACGTCGCCAATAATCATGTCGACGACATCACCGGCGCTAAGAACGCGC TTTGCAAGTTCAGGATTGGCGACGTAAAAATTAGCTCGTAGGTCTCAAGC TAATCACTGTAGGAGGTGGCGAACGACAAAAATGCCACTCTCATGACGGC ATTTAGGTGCAGAAGGGTAAGTGGGTCACTTGGGCAATCGTTTCTTTCGA CCGCCTGTACCCCCCCCCATCGCGTTTTGTTCGGGTACAAGGAATCAGAT GTTGCCAAGTAAAACGTCACGTATCGAGCATCATGCAAGTTTGAAGTACG ATAACGCAGCCCGATTGCTTCTTTTACATGTCACCTTTCGCAATTGTTTG GACCAGGAACACTGGCGATGTCATCGGTAGCCCGCAGAATAGCTTGGGGC GAGGTTTCTCCAAGTACTGGACTAGAGTGGGTACCGGTGATAGCGGGTGC ACCACCGGCGGCTTCAACGCCAACCGCAGAACCCAGTCGTGGCACCCCCA CGTTGTTGGGGGACGAGGACGCTCAGAAGCGCGGATCCTCTGGGGCACCA GGCGGCACGTCCGGTACCACGCGAAAAAATCCACGTCGGACAGTTTCCCA CGACACCAACAACTACAGTCGCCATGGTTTCAGCCGGCTCCCGGATGACG GGGAGGATTTCAGTCGATGGACAGTCCCACAGCTACGCGAGTTTCTGAGT GTAAGCGCGACGAGGATTGTGTGTGTTGCGGGTTGTTTTTGTAGAGGGTA TTTCCTGTCGTATTTTTGTAAGACAAGTCACTACCACCTTGCGATGCTGA CATCAGCTTGAGAGCGATGATGGTGGGACTCACCCCCATTTGGTTCGAGG TCATGCACATGACCTGCCTTTGACATGTCGAGCGTGCGCTGGACCACGAT GGCCACACTCTGGAATTTACCACCGCCTCCCCACCACCTCCAATTGTATC GCCTTAGGTTTTCAGGTGCTTGGACAACGCGGGCACTAGCGGATTAAACA AGGCGCTCCTCTCAACGATTGCAGGGGATGTAGTGCGCATGATTAGGAAG TGCGGGTTGCTTGACACCAACTTAGCCTTTCGACACCCTGTGGCAGACAC CACTTCTTTCGAAGACAAGGAGCGCATGATCATGCCCGATCTACCTGCCA TCTCTCATCGGATTCCGGAGTGGTCAGTCGTTCGACGACACCTCCCGGAG ATATCCAAGTCTTTCATTCTGCAGTTCATTCAGCGGGTAAACCCTCTCGC CCAGGAGGGTTCGCGGGTCTGGTATCGAGCGTTACAGCGAACGATGGACA TGGGGAATCTGGGCAAGATTTGGGCCGTTCCAGCACAAGAAGGCGTCATG TGGCTTGGAACGAGGTGA
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Coding sequence (CDS) from alignment at P-littoralis_Contig193:302409..304226-

>mRNA_P-littoralis_Contig193.84.1 ID=mRNA_P-littoralis_Contig193.84.1|Name=mRNA_P-littoralis_Contig193.84.1|organism=Pylaiella littoralis U1_48|type=CDS|length=984bp|location=Sequence derived from alignment at P-littoralis_Contig193:302409..304226- (Pylaiella littoralis U1_48)
GATCAGGCCGCTCAAGATGATGCCTTCGGGCAAATCCAGAGAGCACTGTG
CGAAGGCGTTGTCCGAGAGTCGAGATTGGAGGACAGTCAGGAAGCGAGGT
TGAATGTGATGAGGAAGTTACAAACAGCTCACAACATGTTTCGACACGCC
GTCGTGTGGAACCCGATTGCGGATACTCTACAGCACTTCTCCGGGTCGGC
TCCGGCGCAAAGCATCGCCACAGACACAGGAACACTGGCGATGTCATCGG
TAGCCCGCAGAATAGCTTGGGGCGAGGTTTCTCCAAGTACTGGACTAGAG
TGGGTACCGGTGATAGCGGGTGCACCACCGGCGGCTTCAACGCCAACCGC
AGAACCCAGTCGTGGCACCCCCACGTTGTTGGGGGACGAGGACGCTCAGA
AGCGCGGATCCTCTGGGGCACCAGGCGGCACGTCCGGTACCACGCGAAAA
AATCCACGTCGGACAGTTTCCCACGACACCAACAACTACAGTCGCCATGG
TTTCAGCCGGCTCCCGGATGACGGGGAGGATTTCAGTCGATGGACAGTCC
CACAGCTACGCGAGTTTCTGAGTGTTTTCAGGTGCTTGGACAACGCGGGC
ACTAGCGGATTAAACAAGGCGCTCCTCTCAACGATTGCAGGGGATGTAGT
GCGCATGATTAGGAAGTGCGGGTTGCTTGACACCAACTTAGCCTTTCGAC
ACCCTGTGGCAGACACCACTTCTTTCGAAGACAAGGAGCGCATGATCATG
CCCGATCTACCTGCCATCTCTCATCGGATTCCGGAGTGGTCAGTCGTTCG
ACGACACCTCCCGGAGATATCCAAGTCTTTCATTCTGCAGTTCATTCAGC
GGGTAAACCCTCTCGCCCAGGAGGGTTCGCGGGTCTGGTATCGAGCGTTA
CAGCGAACGATGGACATGGGGAATCTGGGCAAGATTTGGGCCGTTCCAGC
ACAAGAAGGCGTCATGTGGCTTGGAACGAGGTGA
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