prot_P-littoralis_Contig193.65.1 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig193.65.1
Unique Nameprot_P-littoralis_Contig193.65.1
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length155
Homology
BLAST of mRNA_P-littoralis_Contig193.65.1 vs. uniprot
Match: A0A6H5KT20_9PHAE (FtsJ domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KT20_9PHAE)

HSP 1 Score: 112 bits (281), Expect = 3.590e-26
Identity = 55/71 (77.46%), Postives = 63/71 (88.73%), Query Frame = 0
Query:   47 QKQRQPG-GKRGATGGVAGRVTKGGSSGLWMKRHLKDPYVSAAIEAGAPSRAAFKLVEMNDKHGILYAGDR 116
            Q+Q++PG GK GA G   GR TKGGSSGLWM+RHLKDPYVSAA+EAGAPSRAAFKLVE+ND+HG+L AGDR
Sbjct:   69 QRQKRPGAGKNGAGGAAGGRATKGGSSGLWMRRHLKDPYVSAAVEAGAPSRAAFKLVEINDRHGVLSAGDR 139          
BLAST of mRNA_P-littoralis_Contig193.65.1 vs. uniprot
Match: A0A5N3PEP1_9HYPH (Ribosomal RNA large subunit methyltransferase E n=2 Tax=Microvirga TaxID=186650 RepID=A0A5N3PEP1_9HYPH)

HSP 1 Score: 86.3 bits (212), Expect = 9.020e-18
Identity = 41/69 (59.42%), Postives = 53/69 (76.81%), Query Frame = 0
Query:   71 SSGLWMKRHLKDPYVSAAIEAGAPSRAAFKLVEMNDKHGILYAGDRVVDLGAAPGGWSMVASRVVHARG 139
            SS +W++R L DPYV+ A   G  SRAAFKL+E++DK+ +L  G RVVDLGAAPGGWS +A+R V A+G
Sbjct:   26 SSKIWLERQLNDPYVARAKREGYRSRAAFKLLEIDDKYNLLKPGQRVVDLGAAPGGWSQIAARKVGAKG 94          
BLAST of mRNA_P-littoralis_Contig193.65.1 vs. uniprot
Match: A0A2E4GGA7_9GAMM (Ribosomal RNA large subunit methyltransferase E n=1 Tax=Gammaproteobacteria bacterium TaxID=1913989 RepID=A0A2E4GGA7_9GAMM)

HSP 1 Score: 85.5 bits (210), Expect = 1.470e-17
Identity = 42/68 (61.76%), Postives = 51/68 (75.00%), Query Frame = 0
Query:   68 KGGSSGLWMKRHLKDPYVSAAIEAGAPSRAAFKLVEMNDKHGILYAGDRVVDLGAAPGGWSMVASRVV 135
            +G SS  W++R L DPYV AA EAG  SRAAFKL+E+N+K  I   GD+VVDLGAAPGGWS V+S  +
Sbjct:   19 RGLSSTRWLQRQLNDPYVLAAKEAGYRSRAAFKLIELNEKFDIFSIGDKVVDLGAAPGGWSQVSSENI 86          
BLAST of mRNA_P-littoralis_Contig193.65.1 vs. uniprot
Match: A0A0S7YYE5_9GAMM (Ribosomal RNA large subunit methyltransferase E n=1 Tax=Gammaproteobacteria bacterium SG8_30 TaxID=1703404 RepID=A0A0S7YYE5_9GAMM)

HSP 1 Score: 84.7 bits (208), Expect = 2.200e-17
Identity = 41/69 (59.42%), Postives = 51/69 (73.91%), Query Frame = 0
Query:   71 SSGLWMKRHLKDPYVSAAIEAGAPSRAAFKLVEMNDKHGILYAGDRVVDLGAAPGGWSMVASRVVHARG 139
            SSG W++RH+ DPYV  A + G  SRA++KLVE+N+K   L  G RVVDLGAAPGGWS VA R+V  +G
Sbjct:    6 SSGRWLQRHVNDPYVQRAQKEGYRSRASYKLVELNEKDRFLRPGMRVVDLGAAPGGWSQVARRIVGDKG 74          
BLAST of mRNA_P-littoralis_Contig193.65.1 vs. uniprot
Match: UPI001BD418C0 (RlmE family RNA methyltransferase n=1 Tax=Bradyrhizobium sp. dw_78 TaxID=2719793 RepID=UPI001BD418C0)

HSP 1 Score: 85.1 bits (209), Expect = 2.220e-17
Identity = 41/67 (61.19%), Postives = 50/67 (74.63%), Query Frame = 0
Query:   71 SSGLWMKRHLKDPYVSAAIEAGAPSRAAFKLVEMNDKHGILYAGDRVVDLGAAPGGWSMVASRVVHA 137
            SS LW++R L DPYV+ A   G  SRAA+KL+E++DKH  L  G  VVDLGAAPGGWS VA++ VHA
Sbjct:   22 SSKLWLERQLNDPYVAQAKRDGYRSRAAYKLIEIDDKHRFLKPGSTVVDLGAAPGGWSQVAAKRVHA 88          
BLAST of mRNA_P-littoralis_Contig193.65.1 vs. uniprot
Match: A0A3M1J730_9PROT (Ribosomal RNA large subunit methyltransferase E n=1 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A3M1J730_9PROT)

HSP 1 Score: 84.7 bits (208), Expect = 3.540e-17
Identity = 47/81 (58.02%), Postives = 56/81 (69.14%), Query Frame = 0
Query:   61 GVAGRVTKGG--SSGLWMKRHLKDPYVSAAIEAGAPSRAAFKLVEMNDKHGILYAGDRVVDLGAAPGGWSMVASRVVHARG 139
            GV  R  KG   SS  W++R L DPYV+ A E G  SRAAFKL+E++ K+G+L  G RVVDLGAAPGGWS VA+R V   G
Sbjct:   16 GVKVRTAKGRKLSSTRWLQRQLNDPYVARAREEGYRSRAAFKLLEIDRKYGLLKPGMRVVDLGAAPGGWSQVAARAVSPEG 96          
BLAST of mRNA_P-littoralis_Contig193.65.1 vs. uniprot
Match: A0A3M1JXH3_9PROT (Ribosomal RNA large subunit methyltransferase E n=1 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A3M1JXH3_9PROT)

HSP 1 Score: 84.7 bits (208), Expect = 4.080e-17
Identity = 41/64 (64.06%), Postives = 48/64 (75.00%), Query Frame = 0
Query:   71 SSGLWMKRHLKDPYVSAAIEAGAPSRAAFKLVEMNDKHGILYAGDRVVDLGAAPGGWSMVASRV 134
            SS  W++R L DPYV+AA EAG  SRAAFKL+EMN+KH  L    R+VDLGAAPGGW+ VA  V
Sbjct:   33 SSTRWLQRQLNDPYVAAAREAGYRSRAAFKLIEMNEKHRFLNGARRIVDLGAAPGGWTQVAIEV 96          
BLAST of mRNA_P-littoralis_Contig193.65.1 vs. uniprot
Match: UPI0009313B52 (RlmE family RNA methyltransferase n=1 Tax=Hyphomicrobium sp. CS1GBMeth3 TaxID=1892845 RepID=UPI0009313B52)

HSP 1 Score: 84.7 bits (208), Expect = 4.220e-17
Identity = 42/69 (60.87%), Postives = 50/69 (72.46%), Query Frame = 0
Query:   71 SSGLWMKRHLKDPYVSAAIEAGAPSRAAFKLVEMNDKHGILYAGDRVVDLGAAPGGWSMVASRVVHARG 139
            SS  W++R L DPYV+AA  AG  SRA FKL+E++DKH  L  G RVVDLGAAPGGWS +A+  V A G
Sbjct:   40 SSQRWLERQLNDPYVTAAKRAGYRSRAVFKLIEIDDKHRFLKPGGRVVDLGAAPGGWSQIAAERVQAIG 108          
BLAST of mRNA_P-littoralis_Contig193.65.1 vs. uniprot
Match: A0A0H5BNY3_BLAVI (Ribosomal RNA large subunit methyltransferase E n=1 Tax=Blastochloris viridis TaxID=1079 RepID=A0A0H5BNY3_BLAVI)

HSP 1 Score: 84.3 bits (207), Expect = 4.450e-17
Identity = 44/72 (61.11%), Postives = 53/72 (73.61%), Query Frame = 0
Query:   64 GRVTKGGSSGLWMKRHLKDPYVSAAIEAGAPSRAAFKLVEMNDKHGILYAGDRVVDLGAAPGGWSMVASRVV 135
            GR T   SS  W+KR L DPYV+ A  AG  SRAAFKLVE++DK+ +L  G RVVDLGAAPGGWS +A++ V
Sbjct:   21 GRTT---SSQQWLKRQLNDPYVARARAAGYRSRAAFKLVEIDDKYHVLKRGQRVVDLGAAPGGWSQIAAQRV 89          
BLAST of mRNA_P-littoralis_Contig193.65.1 vs. uniprot
Match: A0A6C1SQS2_9PROT (Ribosomal RNA large subunit methyltransferase E n=1 Tax=Rhodospirillales bacterium TaxID=2026786 RepID=A0A6C1SQS2_9PROT)

HSP 1 Score: 84.7 bits (208), Expect = 6.200e-17
Identity = 49/89 (55.06%), Postives = 57/89 (64.04%), Query Frame = 0
Query:   53 GGKRGATGGVAGRVTKGG----SSGLWMKRHLKDPYVSAAIEAGAPSRAAFKLVEMNDKHGILYAGDRVVDLGAAPGGWSMVASRVVHA 137
            GG+R   G   GR  KG     SS  W+KRHL DPYV AA   G  SRAAFKL+E++D+   L  G RVVDLGAAPGGW+ VA+  V A
Sbjct:   33 GGRRLRRGAGRGRAVKGPKRKPSSARWLKRHLADPYVIAARRKGYRSRAAFKLLELDDRFRFLRPGARVVDLGAAPGGWTQVAAERVRA 121          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig193.65.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KT20_9PHAE3.590e-2677.46FtsJ domain-containing protein n=2 Tax=Ectocarpus ... [more]
A0A5N3PEP1_9HYPH9.020e-1859.42Ribosomal RNA large subunit methyltransferase E n=... [more]
A0A2E4GGA7_9GAMM1.470e-1761.76Ribosomal RNA large subunit methyltransferase E n=... [more]
A0A0S7YYE5_9GAMM2.200e-1759.42Ribosomal RNA large subunit methyltransferase E n=... [more]
UPI001BD418C02.220e-1761.19RlmE family RNA methyltransferase n=1 Tax=Bradyrhi... [more]
A0A3M1J730_9PROT3.540e-1758.02Ribosomal RNA large subunit methyltransferase E n=... [more]
A0A3M1JXH3_9PROT4.080e-1764.06Ribosomal RNA large subunit methyltransferase E n=... [more]
UPI0009313B524.220e-1760.87RlmE family RNA methyltransferase n=1 Tax=Hyphomic... [more]
A0A0H5BNY3_BLAVI4.450e-1761.11Ribosomal RNA large subunit methyltransferase E n=... [more]
A0A6C1SQS2_9PROT6.200e-1755.06Ribosomal RNA large subunit methyltransferase E n=... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002877Ribosomal RNA methyltransferase, FtsJ domainPFAMPF01728FtsJcoord: 95..137
e-value: 2.5E-12
score: 47.3
IPR029063S-adenosyl-L-methionine-dependent methyltransferase superfamilyGENE3D3.40.50.150Vaccinia Virus protein VP39coord: 68..150
e-value: 9.6E-15
score: 56.5
IPR029063S-adenosyl-L-methionine-dependent methyltransferase superfamilySUPERFAMILY53335S-adenosyl-L-methionine-dependent methyltransferasescoord: 68..134
NoneNo IPR availablePIRSRPIRSR028774-2PIRSR028774-2coord: 91..130
e-value: 3.5E-4
score: 17.8
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 24..70
NoneNo IPR availablePANTHERPTHR10920RIBOSOMAL RNA METHYLTRANSFERASEcoord: 76..136

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig193contigP-littoralis_Contig193:234842..239337 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig193.65.1mRNA_P-littoralis_Contig193.65.1Pylaiella littoralis U1_48mRNAP-littoralis_Contig193 234842..239628 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig193.65.1 ID=prot_P-littoralis_Contig193.65.1|Name=mRNA_P-littoralis_Contig193.65.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=155bp
MVVRVLTKTFERLGLKPLARSAPDKRSLDLHTERKISGTTKGGGAGQKQR
QPGGKRGATGGVAGRVTKGGSSGLWMKRHLKDPYVSAAIEAGAPSRAAFK
LVEMNDKHGILYAGDRVVDLGAAPGGWSMVASRVVHARGAARNTQQRGGR
ATGGG
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002877RNA_MeTrfase_FtsJ_dom
IPR029063SAM-dependent_MTases_sf