prot_P-littoralis_Contig193.63.1 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_P-littoralis_Contig193.63.1
Unique Name	prot_P-littoralis_Contig193.63.1
Type	polypeptide
Organism	Pylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length	373

Homology

[Close]

BLAST of mRNA_P-littoralis_Contig193.63.1 vs. uniprot
Match: A0A6H5KT20_9PHAE (FtsJ domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KT20_9PHAE)

HSP 1 Score: 207 bits (526), Expect = 3.160e-58
Identity = 158/330 (47.88%), Postives = 172/330 (52.12%), Query Frame = 0

Query:   42 EEGNVQKDFNGERVFLPRGTSASRALLPRPEQPSTDPLEELFLAATSTPSVAAEEPTATPAAPAAQDIKPSSLVVGGVRRGRVSRDENGANRSPPSAPSSSTPPGSGRRRRANVVLSDMAPSFSGDRDTDQARVAGLVLDALAACLGDEATRLREQPQRCGAGAGGSDPQDREARGRSTGAAAYPCR-ADGDEAMSSTRSSGRILPGKGGQGSVTDVPGISFPGPGEMNSSSSSRRSDVRGRLTVPCSENERNVGGGGDEIEEEGSDGTGLLARGGTFLGKFFAGRDEREVKEEAERLFEGVKVVKPPASRSGSGEKYLLATGFLLGGRK 370
            ++G+       E  FL RGTSASR LLPRPEQPSTD LE LFLA                  PA                                              RA+VVLSDMAPSFSGDRDTDQ RVA LVLDALAACLGDEA+R R +P R GAG  G +  D    G  +GA       A G++A    R  G  +    G    +DV   S  G       SSSR+  V GR                DE      +G GLLARGGTFLGKFFAGRDEREVKEEAERLFE VKVVKPPASRSGSGE YLLATGFLLGGRK
Sbjct:  239 DDGSASDGVGEEDAFLLRGTSASRTLLPRPEQPSTDSLEHLFLAGGGNRD------------PATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTRASVVLSDMAPSFSGDRDTDQGRVAALVLDALAACLGDEASR-RSEPPRKGAGERGRNSVDPLGGGEGSGAVRLGGDVAGGEKAARMRREEGNEVGATTGGTLSSDVGVSSNGGTAAETPVSSSRKHAVGGR----------------DEWGGIEGEGPGLLARGGTFLGKFFAGRDEREVKEEAERLFERVKVVKPPASRSGSGEMYLLATGFLLGGRK 539

[Close]

BLAST of mRNA_P-littoralis_Contig193.63.1 vs. uniprot
Match: A0A6L5Z4E8_9RHOB (Ribosomal RNA large subunit methyltransferase E n=1 Tax=Halovulum marinum TaxID=2662447 RepID=A0A6L5Z4E8_9RHOB)

HSP 1 Score: 58.5 bits (140), Expect = 3.770e-6
Identity = 32/60 (53.33%), Postives = 41/60 (68.33%), Query Frame = 0

Query:  311 LLARGGTFLGKFFAGRDEREVKEEAERLFEGVKVVKPPASRSGSGEKYLLATGFLLGGRK 370
            +L  GGTF+ K  AG  E E+ ++ +R +  VK VKPPASRS S EK++LATGF   GRK
Sbjct:  180 ILVPGGTFVAKVLAGGAEGELLQQLKRDYASVKHVKPPASRSDSSEKFVLATGFR--GRK 237

[Close]

BLAST of mRNA_P-littoralis_Contig193.63.1 vs. uniprot
Match: A0A2S7K0A4_9PROT (Ribosomal RNA large subunit methyltransferase E n=1 Tax=Marinicaulis flavus TaxID=2058213 RepID=A0A2S7K0A4_9PROT)

HSP 1 Score: 58.5 bits (140), Expect = 4.420e-6
Identity = 30/54 (55.56%), Postives = 38/54 (70.37%), Query Frame = 0

Query:  311 LLARGGTFLGKFFAGRDEREVKEEAERLFEGVKVVKPPASRSGSGEKYLLATGF 364
            +LA GG F+ K FAG  E ++    ++ FE VK VKP ASRSGS EKY++ATGF
Sbjct:  215 VLAPGGAFVCKVFAGGAEGDILTRLKQNFESVKHVKPKASRSGSAEKYVVATGF 268

[Close]

BLAST of mRNA_P-littoralis_Contig193.63.1 vs. uniprot
Match: A0A316GGX9_9RHOB (Ribosomal RNA large subunit methyltransferase E n=1 Tax=Silicimonas algicola TaxID=1826607 RepID=A0A316GGX9_9RHOB)

HSP 1 Score: 57.8 bits (138), Expect = 5.500e-6
Identity = 30/54 (55.56%), Postives = 37/54 (68.52%), Query Frame = 0

Query:  311 LLARGGTFLGKFFAGRDEREVKEEAERLFEGVKVVKPPASRSGSGEKYLLATGF 364
            +L  GGTF+ K  AG  E E++   +R FE V  VKPPASRS S EKY++ATGF
Sbjct:  178 VLEEGGTFVAKVLAGGAEGELQLTLKRRFEKVANVKPPASRSDSSEKYVVATGF 231

[Close]

BLAST of mRNA_P-littoralis_Contig193.63.1 vs. uniprot
Match: A0A6S6QUQ1_9HYPH (Ribosomal RNA large subunit methyltransferase E n=1 Tax=Terrihabitans soli TaxID=708113 RepID=A0A6S6QUQ1_9HYPH)

HSP 1 Score: 57.0 bits (136), Expect = 9.780e-6
Identity = 30/54 (55.56%), Postives = 36/54 (66.67%), Query Frame = 0

Query:  311 LLARGGTFLGKFFAGRDEREVKEEAERLFEGVKVVKPPASRSGSGEKYLLATGF 364
            +LA  G FL K  AG  ERE+    ++ F  VK +KPPASRSGS E Y+LATGF
Sbjct:  175 VLAPNGRFLAKVLAGGTERELLAMLKKDFREVKHIKPPASRSGSSELYVLATGF 228

[Close]

BLAST of mRNA_P-littoralis_Contig193.63.1 vs. uniprot
Match: A0A0J9GS43_9RHOB (Ribosomal RNA large subunit methyltransferase E n=1 Tax=Candidatus Rhodobacter lobularis TaxID=1675527 RepID=A0A0J9GS43_9RHOB)

HSP 1 Score: 56.6 bits (135), Expect = 1.380e-5
Identity = 28/54 (51.85%), Postives = 38/54 (70.37%), Query Frame = 0

Query:  311 LLARGGTFLGKFFAGRDEREVKEEAERLFEGVKVVKPPASRSGSGEKYLLATGF 364
            +LA GGTF+ K  AG  E ++++  +R F  V  VKPPASRS S EK+++ATGF
Sbjct:  180 VLAEGGTFVAKVLAGGTEGDLQKTLKRRFAKVANVKPPASRSDSSEKFVVATGF 233

[Close]

BLAST of mRNA_P-littoralis_Contig193.63.1 vs. uniprot
Match: A0A365U4Q7_9RHOB (Ribosomal RNA large subunit methyltransferase E n=1 Tax=Rhodosalinus halophilus TaxID=2259333 RepID=A0A365U4Q7_9RHOB)

HSP 1 Score: 56.6 bits (135), Expect = 1.440e-5
Identity = 29/54 (53.70%), Postives = 36/54 (66.67%), Query Frame = 0

Query:  311 LLARGGTFLGKFFAGRDEREVKEEAERLFEGVKVVKPPASRSGSGEKYLLATGF 364
            +L  GGTF+ K  AG  E  ++ E +R F  V  VKPPASRS S EKY++ATGF
Sbjct:  180 VLEEGGTFVAKVLAGGAEDALQAELKRRFAKVSNVKPPASRSDSSEKYVVATGF 233

[Close]

BLAST of mRNA_P-littoralis_Contig193.63.1 vs. uniprot
Match: A0A4Q3Y9A2_9RHOB (Ribosomal RNA large subunit methyltransferase E n=1 Tax=Loktanella sp. IMCC34160 TaxID=2510646 RepID=A0A4Q3Y9A2_9RHOB)

HSP 1 Score: 56.6 bits (135), Expect = 1.480e-5
Identity = 29/54 (53.70%), Postives = 39/54 (72.22%), Query Frame = 0

Query:  311 LLARGGTFLGKFFAGRDEREVKEEAERLFEGVKVVKPPASRSGSGEKYLLATGF 364
            +LA GGTF+ K  AG  E E+++  ++ FE V  VKPPASRS S EK+++ATGF
Sbjct:  183 VLAPGGTFVAKVLAGGAEGELQKLLKQRFEKVANVKPPASRSDSSEKFVVATGF 236

[Close]

BLAST of mRNA_P-littoralis_Contig193.63.1 vs. uniprot
Match: A0A1I1DM63_9RHOB (Ribosomal RNA large subunit methyltransferase E n=1 Tax=Tropicimonas isoalkanivorans TaxID=441112 RepID=A0A1I1DM63_9RHOB)

HSP 1 Score: 56.2 bits (134), Expect = 1.980e-5
Identity = 29/54 (53.70%), Postives = 38/54 (70.37%), Query Frame = 0

Query:  311 LLARGGTFLGKFFAGRDEREVKEEAERLFEGVKVVKPPASRSGSGEKYLLATGF 364
            +LA GGTF+ K  AG  E E+++  +  FE V  VKPPASRS S EK+++ATGF
Sbjct:  178 VLAPGGTFVAKVLAGGAEGELQKLLKNRFEKVANVKPPASRSDSSEKFVVATGF 231

[Close]

BLAST of mRNA_P-littoralis_Contig193.63.1 vs. uniprot
Match: A0A3M0WK59_9PROT (Ribosomal RNA large subunit methyltransferase E n=1 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A3M0WK59_9PROT)

HSP 1 Score: 56.2 bits (134), Expect = 2.130e-5
Identity = 29/54 (53.70%), Postives = 36/54 (66.67%), Query Frame = 0

Query:  311 LLARGGTFLGKFFAGRDEREVKEEAERLFEGVKVVKPPASRSGSGEKYLLATGF 364
            +LA GG F+ K  AG  E E+++  +R F  V  VKPPASRS S EKY+LA GF
Sbjct:  185 VLAPGGVFVAKVLAGGAEGELQKRLKRAFREVHNVKPPASRSDSAEKYVLALGF 238

The following BLAST results are available for this feature:

BLAST of mRNA_P-littoralis_Contig193.63.1 vs. uniprot

BLAST of mRNA_P-littoralis_Contig193.63.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
A0A6H5KT20_9PHAE	3.160e-58	47.88	FtsJ domain-containing protein n=2 Tax=Ectocarpus ...	[more]
A0A6L5Z4E8_9RHOB	3.770e-6	53.33	Ribosomal RNA large subunit methyltransferase E n=...	[more]
A0A2S7K0A4_9PROT	4.420e-6	55.56	Ribosomal RNA large subunit methyltransferase E n=...	[more]
A0A316GGX9_9RHOB	5.500e-6	55.56	Ribosomal RNA large subunit methyltransferase E n=...	[more]
A0A6S6QUQ1_9HYPH	9.780e-6	55.56	Ribosomal RNA large subunit methyltransferase E n=...	[more]
A0A0J9GS43_9RHOB	1.380e-5	51.85	Ribosomal RNA large subunit methyltransferase E n=...	[more]
A0A365U4Q7_9RHOB	1.440e-5	53.70	Ribosomal RNA large subunit methyltransferase E n=...	[more]
A0A4Q3Y9A2_9RHOB	1.480e-5	53.70	Ribosomal RNA large subunit methyltransferase E n=...	[more]
A0A1I1DM63_9RHOB	1.980e-5	53.70	Ribosomal RNA large subunit methyltransferase E n=...	[more]
A0A3M0WK59_9PROT	2.130e-5	53.70	Ribosomal RNA large subunit methyltransferase E n=...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR029063	S-adenosyl-L-methionine-dependent methyltransferase superfamily	GENE3D	3.40.50.150	Vaccinia Virus protein VP39	coord: 305..366 e-value: 2.0E-11 score: 46.1
IPR002877	Ribosomal RNA methyltransferase, FtsJ domain	PFAM	PF01728	FtsJ	coord: 150..364 e-value: 1.3E-14 score: 54.7
None	No IPR available	PIRSR	PIRSR005461-1	PIRSR005461-1	coord: 311..364 e-value: 2.9E-11 score: 41.3
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 265..279
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..172
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 130..148
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 187..310
None	No IPR available	PANTHER	PTHR10920:SF18	RRNA METHYLTRANSFERASE 2, MITOCHONDRIAL	coord: 149..364
None	No IPR available	PANTHER	PTHR10920	RIBOSOMAL RNA METHYLTRANSFERASE	coord: 149..364

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
P-littoralis_Contig193	contig	P-littoralis_Contig193:233075..234193 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
Pylaiella littoralis U1_48 OGS1.0	2022-07-08

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_P-littoralis_Contig193.63.1	mRNA_P-littoralis_Contig193.63.1	Pylaiella littoralis U1_48	mRNA	P-littoralis_Contig193 232631..234821 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_P-littoralis_Contig193.63.1 ID=prot_P-littoralis_Contig193.63.1|Name=mRNA_P-littoralis_Contig193.63.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=373bp
MKSGEETSVVDETTRASLGRNSDGGGDGGVENIGGFNKGKEEEGNVQKDF
NGERVFLPRGTSASRALLPRPEQPSTDPLEELFLAATSTPSVAAEEPTAT
PAAPAAQDIKPSSLVVGGVRRGRVSRDENGANRSPPSAPSSSTPPGSGRR
RRANVVLSDMAPSFSGDRDTDQARVAGLVLDALAACLGDEATRLREQPQR
CGAGAGGSDPQDREARGRSTGAAAYPCRADGDEAMSSTRSSGRILPGKGG
QGSVTDVPGISFPGPGEMNSSSSSRRSDVRGRLTVPCSENERNVGGGGDE
IEEEGSDGTGLLARGGTFLGKFFAGRDEREVKEEAERLFEGVKVVKPPAS
RSGSGEKYLLATGFLLGGRKKR*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR029063	SAM-dependent_MTases_sf
IPR002877	RNA_MeTrfase_FtsJ_dom