prot_P-littoralis_Contig193.42.1 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig193.42.1
Unique Nameprot_P-littoralis_Contig193.42.1
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length405
Homology
BLAST of mRNA_P-littoralis_Contig193.42.1 vs. uniprot
Match: A0A6H5KFX7_9PHAE (Exonuclease 1 n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KFX7_9PHAE)

HSP 1 Score: 196 bits (497), Expect = 6.500e-52
Identity = 139/401 (34.66%), Postives = 200/401 (49.88%), Query Frame = 0
Query:    4 LPAAGADFSKWLVKNLRSFLQNIRCLERSGVSGTSKTELVSMAGEVMQMVNVLDPSSSRHHLLFRPPMED-ATFEEKLRFVMPDMPRNDFFSTDIEQLIETLPEVSESVVADWLTEGRSVDIRSTRVLYRGMQRAMDLGAAGGLSGALVWKEDGSSSGHMWVRLRIQASMNP-HYYNAYVKLAVVRIAGTGSFEAPDDCDSEAEDEESDGEISVVDGGEEIWR---LLATRVLAALCKCKAGRKGLCHHVCMILQLMRLLQMSIREVNDFNPVTSTGRPCQWILNHCRGGREAAENTWWGMVLPEMAEKSRQIRDPRGQEGFGEYTPVDTRGVVKGNR-QDFVPYPAGGVWAERHKHHVDGRSISLVQKAAFDVLSDAVRSTKQRRGRRSLATDVLPPLVR 398
            LP A  DF+KW V  LR FL   RCL+ +G S   K  L  +AG+V+ M+      +S     FR P+ D ++F++K R VMP++P      +  E L + LPE+S+SV+  +L +   +    +RV YRGMQ+ MD+G    L G          +G M++ +   AS +    Y   ++L V  +            D  A    ++ E   V+ G+  W    L+A  V+AALC+C AG  G C H  M+L L RLLQM+  E+  FNP T TGR C WI+ +C+GGR   + + +G  L       R++RDPR   GF +      +GV   +R Q F P+P+GG W E   H   G+  S  +        D  R    R    ++A D LPPLVR
Sbjct:  463 LPGAEEDFNKWTVAQLREFLSVFRCLDHAGHSAYLKGPLAELAGQVVAMIKKCGLLNSNQ--AFRHPVPDLSSFQDKERMVMPELPGPRSRISGFEHLQQHLPEMSKSVILQFLGQVNPISGEGSRVWYRGMQKVMDMGNLNRLWGVPA------KNGLMYLGMSAGASFSDTKTYEVRIQLRVEAL------------DESAHPSAAEEEGRGVESGQ--WPRPPLVALGVVAALCECPAGISGGCSHTAMVLFLTRLLQMTEDELATFNPSTCTGRACSWIMQNCKGGRSGEQCSLYGEPLSHGTNVVRKMRDPR--RGFDDDLLAKVQGVTAIDRMQHFNPHPSGGKWDELKLHFDAGKDFSRFKMDKLLAFVDCARGPDNR----AVAMDYLPPLVR 835          
BLAST of mRNA_P-littoralis_Contig193.42.1 vs. uniprot
Match: A0A6H5KTJ3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KTJ3_9PHAE)

HSP 1 Score: 179 bits (455), Expect = 4.430e-48
Identity = 140/397 (35.26%), Postives = 202/397 (50.88%), Query Frame = 0
Query:    9 ADFSKWLVKNLRSFLQNIRCLERSGVSGTSKTELVSMAGEVMQMVNVLDPSSSRHHLLFRPPMEDATFEEKLRFVMPDMPRNDFFSTDIEQLIETLPEVS-ESVVADWLTEGRSVDIRSTRVLYRGMQRAMDLGAAGGLSGALVWKEDGSSSGHMWVRLRIQASMNPHYYNAYVKLAVVRIAGTGSFEAPDDCDSEAEDEESDGEISVVDGGEEIWRLLATRVLAALCKCKAGRKGLCHHVCMILQLMRLLQMSIREVNDFNPVTSTGRPCQWILNHCRGGREAAENTWWGMVLPEMAEKSRQIRDPRGQE--GFGEYTPVDTRGVVKGNRQ-DFVPYPAGGVWAERHKHHVDGRSISLVQKAAFDVLSDAVRSTKQ--RRGRRSLATDVLPPLVRR 399
            A      V  LR FL   RCLE++G +   K +L+S+A  V+Q+V       S   L+FR P +DA             P + +   D E L   LPE++ ++++  WL    S+   + RVLYRGM+R +DLGA G LSG       G + G + +RL  + SM    Y     + V R+         D+ DS + D  SD +I          RL+AT V AA C+C++G  G CHHVC +LQL+RLLQ++  E+  ++P + T   CQWIL HC GGR    + + G  + E+  + R +RDP+     G G+  P  TRGVV  +R+ +F  +P  G WA   +    G S+S  Q   +D+LS  +   +     G  SLA DVL P +RR
Sbjct:  103 AQLGSMTVAQLREFLGPFRCLEQAGTTSFLKPKLLSVAKGVVQVVEQSGLVGSS--LVFRMPQQDAAAGGL------GQPSDGWL--DWEPLRAQLPELAGDTIIIAWLRARGSLIGDTGRVLYRGMERVLDLGALGWLSGIPC----GENGGTLHLRLNSRGSMRDKEYLVQADVRVERVDVVAQHPDVDEGDSNSSDGRSDDDIR--------RRLVATCVEAAWCQCQSGAGGGCHHVCQLLQLVRLLQLTEHELETWDPDSPTSVACQWILRHCGGGRNTEFDIFNGATVREVVGELRTLRDPKRVPFGGGGDDVP-STRGVVAMDRRTEFSSHPDHGKWASAREDFDGGESMSHAQ---WDMLSRFIDGERVPGAGGSTSLAVDVLRPRLRR 473          
BLAST of mRNA_P-littoralis_Contig193.42.1 vs. uniprot
Match: D7G3Y3_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G3Y3_ECTSI)

HSP 1 Score: 90.9 bits (224), Expect = 5.560e-17
Identity = 52/139 (37.41%), Postives = 79/139 (56.83%), Query Frame = 0
Query:    4 LPAAGADFSKWLVKNLRSFLQNIRCLERSGVSGTSKTELVSMAGEVMQMVNVLDPSSSRHHLLFRPPMED-ATFEEKLRFVMPDMPRNDFFSTDIEQLIETLPEVSESVVADWLTEGRSVDIRSTRVLYRGMQRAMDLG 141
            LP A  DF+KW V  LR FL   RCL+ +G S   K  LV +AG+++ M+      +S     FR P+ D ++F++K R  MP++P      +  E L + LPE+S+SV+  +L +   +    +RV YRGMQ+  D+G
Sbjct:  125 LPGAEEDFNKWTVAQLREFLSVFRCLDHAGHSAYLKGPLVELAGQIVAMIKKCGLLNSNQ--AFRHPVPDLSSFQDKERMAMPELPGPRSRISGFEHLQQHLPEMSKSVILQFLRQVNPISGEGSRVWYRGMQKVTDMG 261          
BLAST of mRNA_P-littoralis_Contig193.42.1 vs. uniprot
Match: D7FQM4_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FQM4_ECTSI)

HSP 1 Score: 81.6 bits (200), Expect = 2.990e-13
Identity = 59/174 (33.91%), Postives = 90/174 (51.72%), Query Frame = 0
Query:    4 LPAAGADFSKWLVKNLRSFLQNIRCLERSGVSGTSKTELVSMAGEVMQMVNVLDPSSSRHHLLFRPPMED-ATFEEKLRFVMPDMPRNDFFSTDIEQLIETLPEVSESVVADWLTEGRSVDIRSTRVLYRGMQRAMDLGAAGGLSGALVWKEDGSSSGHMWVRLR-IQASMNPH 175
            LP A  DF+KW V  LR FL   RCL+ +G S   K  L  +AG+V+ M+      +S     FR P+ D ++F++K R  MP +P      +  E L + LPE+S+SV+  +L +   +    +RV   GMQ+ MD+G    L G          +G M++ +R + AS  P+
Sbjct:  237 LPGAEEDFNKWTVAQLREFLSVFRCLDHAGHSAYLKGPLAELAGQVVAMIKKCGLLNSNQ--AFRHPVPDLSSFQDKERMAMPGLPGPRSRISGFEHLQQHLPEMSKSVILQFLRQVNPISGEGSRV---GMQKVMDMGNLNRLWGVPA------KNGLMYLGMRPVSASPTPN 399          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig193.42.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
A0A6H5KFX7_9PHAE6.500e-5234.66Exonuclease 1 n=1 Tax=Ectocarpus sp. CCAP 1310/34 ... [more]
A0A6H5KTJ3_9PHAE4.430e-4835.26Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G3Y3_ECTSI5.560e-1737.41Uncharacterized protein n=2 Tax=Ectocarpus silicul... [more]
D7FQM4_ECTSI2.990e-1333.91Uncharacterized protein n=2 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig193contigP-littoralis_Contig193:126498..128439 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig193.42.1mRNA_P-littoralis_Contig193.42.1Pylaiella littoralis U1_48mRNAP-littoralis_Contig193 126205..129706 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig193.42.1 ID=prot_P-littoralis_Contig193.42.1|Name=mRNA_P-littoralis_Contig193.42.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=405bp
MPSLPAAGADFSKWLVKNLRSFLQNIRCLERSGVSGTSKTELVSMAGEVM
QMVNVLDPSSSRHHLLFRPPMEDATFEEKLRFVMPDMPRNDFFSTDIEQL
IETLPEVSESVVADWLTEGRSVDIRSTRVLYRGMQRAMDLGAAGGLSGAL
VWKEDGSSSGHMWVRLRIQASMNPHYYNAYVKLAVVRIAGTGSFEAPDDC
DSEAEDEESDGEISVVDGGEEIWRLLATRVLAALCKCKAGRKGLCHHVCM
ILQLMRLLQMSIREVNDFNPVTSTGRPCQWILNHCRGGREAAENTWWGMV
LPEMAEKSRQIRDPRGQEGFGEYTPVDTRGVVKGNRQDFVPYPAGGVWAE
RHKHHVDGRSISLVQKAAFDVLSDAVRSTKQRRGRRSLATDVLPPLVRRL
DIAT*
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