prot_P-littoralis_Contig193.27.1 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig193.27.1
Unique Nameprot_P-littoralis_Contig193.27.1
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length658
Homology
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BLAST of mRNA_P-littoralis_Contig193.27.1 vs. uniprot
Match: D7G1J8_ECTSI (Hypothetical leucine rich repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G1J8_ECTSI)

HSP 1 Score: 489 bits (1259), Expect = 1.880e-162
Identity = 271/403 (67.25%), Postives = 306/403 (75.93%), Query Frame = 0 
Query:   77 PGDETTSLASRGLLTSSGGGTFSGSYERLPSWGGDG--------------DGGDEETGGGGDISGDKIVRRSISVNSDGGEYGGGSGARSLSISSDIIPATSDGEDLPVGP-VKKRGPKSGRKSR-LALGAGRGGGRQGWGLSMKDRQVLKRRTVLARLTPIVLLSSFVNDLDLVTDWTFLKYGLAGAGEVITQLALLFAVVGTVMWALSATEFSLMSKLKNMWKGNPLSRLQHVGLGWQLLANVILEDAPQFVITVITKPTSVTGVLNLCSSGLSLCAKVVHGISSQRAPSLSTQFKMIDQDPAVTRNLFKLRDEAKKQAASAEKLVELAWINRCCVGEKKAAAVYQVLQIDPTLVNGELEYMRADLLSGSKLYITHCCLTGPIPSKLGDLKILQIVVLSAN 463
            PGD++ +LA  GL  S GGGTFSGSY+RLPSWGGD               DGGD              V RS+S+NSDGG +G G+             A +      +GP +K+R P  G+ SR L    GRG G   W LS KDRQVLKRRT+L+R+TPIVLLSSFV DLDL+TDWTFLKYGLAG G +I +LAL FA+VGTVMWALS TEFSLMSKLKNMWKGNPLSRLQHVGLGWQLLANV LED PQF+ITVIT+PTSVTGVLNLC+SGLSLCAK+VHG SSQRAPSLSTQFKMIDQDPAVTRNLFKLRDEAKK+A +AEKLV LAW NRC  GE+KAAAV+QVLQ+DPT V G+LEYMRADL SGS+LYIT   LTGPIPS++GD+ IL+ VVLS N
Sbjct:   26 PGDKSRALAGLGLSASKGGGTFSGSYQRLPSWGGDXXXXXXXXXXXXXXXDGGD--------------VPRSLSINSDGGGFGAGTXXXXX-----XXXAAATARSTELGPAIKRRAP--GKTSRGLGASGGRGSGGHSWFLSAKDRQVLKRRTILSRITPIVLLSSFVGDLDLITDWTFLKYGLAGQGFLIRKLALFFAIVGTVMWALSTTEFSLMSKLKNMWKGNPLSRLQHVGLGWQLLANVFLEDVPQFIITVITRPTSVTGVLNLCASGLSLCAKIVHGYSSQRAPSLSTQFKMIDQDPAVTRNLFKLRDEAKKKAKAAEKLVYLAWANRCSTGEQKAAAVFQVLQMDPTFVGGDLEYMRADLFSGSRLYITASSLTGPIPSQVGDMTILRAVVLSGN 407
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BLAST of mRNA_P-littoralis_Contig193.27.1 vs. uniprot
Match: A0A6H5JNU7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JNU7_9PHAE)

HSP 1 Score: 396 bits (1018), Expect = 7.430e-130
Identity = 248/407 (60.93%), Postives = 282/407 (69.29%), Query Frame = 0 
Query:    1 MMYIVFLAFLYKLQGGSFISFVRAALGYDVEADKTPATPAKSGNDAFQKGQRRPVQQSIAATTGYASDGAASNSSAPG--------DETTSLASRGLLTSSGGGTFSGSYERLPSWGGDG------------DGGDEETGGGGDISGDKIVRRSISVNSDGGEYGGGSGARSLSISSDIIPATSDGEDLPVGP-VKKRGPKSGRKSR-LALGAGRGGGRQGWGLSMKDRQVLKRRTVLARLTPIVLLSSFVNDLDLVTDWTFLKYGLAGAGE-----------VITQLALLFAVVGTVMWALSATEFSLMSKLKNMWKGNPLSRLQHVGLGWQLLANVILEDAPQFVITVITKPTSVTGVLNLCSSGLSLCAKVVHGISSQRAPSLSTQFKMIDQDPAVTRNLFKLR 374
            MMY+VFLAFLYKLQGG F SFVRA LG+DVEAD TP     S N + +KG  +PV+ ++A   GY SDGAAS+ SAPG        D++ +LA  GL  S GGGTFSGSY+RLPSWGGD             DGGD              V RS+S+NSDGG +  G+             AT+   +L  GP +K+R P  G+ SR L     RG G   W LS KDRQVLKRRT+L+R+TPIVLLSSFV DLDL+TDW FLKYGLAG GE           +I +LAL FA+VGTVMWALS TEFSLMSKLKNMWK      LQHVGLGWQLLANV LED PQF+ITVIT+PTSVTGVLNLC+SGLSLCAK++HGISSQRAPSLSTQFKMIDQDPAVTRNLFKLR
Sbjct:    1 MMYLVFLAFLYKLQGGRFRSFVRAVLGHDVEADMTPT----SHNASDEKGVSKPVKPAVA---GYISDGAASDVSAPGEPAAAALGDKSRALAGLGLSASKGGGTFSGSYQRLPSWGGDXXXXXXXXXXXXXDGGD--------------VPRSLSINSDGGGFEAGTRXXXXXX---XXXATARSTEL--GPAIKRRAP--GKTSRGLGASGARGSGGHSWYLSAKDRQVLKRRTILSRITPIVLLSSFVGDLDLITDWMFLKYGLAGQGENTKAEGCLQRFLIRKLALFFAIVGTVMWALSTTEFSLMSKLKNMWKV-----LQHVGLGWQLLANVFLEDVPQFIITVITRPTSVTGVLNLCASGLSLCAKIIHGISSQRAPSLSTQFKMIDQDPAVTRNLFKLR 374
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BLAST of mRNA_P-littoralis_Contig193.27.1 vs. uniprot
Match: D7FK13_ECTSI (Hypothetical leucine rich repeat protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FK13_ECTSI)

HSP 1 Score: 183 bits (464), Expect = 1.050e-46
Identity = 108/258 (41.86%), Postives = 158/258 (61.24%), Query Frame = 0 
Query:  207 RQVLKRRTVLARLTPIVLLSSFVNDLDLVTDWTFLKYGLAGAGEVITQLALLFAVVGTVMWALSATEFSLMSKLKNMW--KGNPLSRLQHVGLGWQLLANVILEDAPQFVITVITKPTSVTGVLNLCSSGLSLCAKVVHGISSQRAPSLSTQFKMIDQDPAVTRNLFKLRDEAKKQAASAEKLVELAWINRCCV----------GEKKAAAVYQVLQIDPTLVNGELEYMRADLLSGSKLYITHCCLTGPIPSKLGDL 452
            R+ LKR  +  ++TP+ +L+S V+DLDL  DW FL+ GL  A E++  +A +  VVGTVM+ L   EF  +S+    W  +G  LS LQHV LGWQLL NV++ED PQ VIT +T PTSV GVLN+ ++G +L AK+  G +++    +S+Q +MID DP V ++L   R +A++ AA+A  L  L  +NR              ++  A  +QV+Q+DP  +NGEL Y+R + L  S+L +    L G +P  LGD+
Sbjct:  122 RRTLKRSAIWEKVTPLTVLTSVVSDLDLFADWYFLQEGLEDAQELVADVAFVLTVVGTVMYVLLTLEFHPVSEAWT-WCRRGRALSPLQHVPLGWQLLLNVVVEDIPQLVITWVTSPTSVAGVLNIATAGFALLAKMAEGFATRTDLPMSSQLRMIDTDPGVVQHLLNARHKAEELAANAASLAVL--VNRFGAENAAMPTERNSKRLLATAFQVMQVDPGFLNGELGYIR-EKLEVSRLNLGRFGLKGSLPPSLGDV 375
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BLAST of mRNA_P-littoralis_Contig193.27.1 vs. uniprot
Match: A0A6H5JP38_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JP38_9PHAE)

HSP 1 Score: 78.2 bits (191), Expect = 2.020e-14
Identity = 38/56 (67.86%), Postives = 44/56 (78.57%), Query Frame = 0 
Query:  387 LVELAWINRCCVGEKKAAAVYQVLQIDPTLVNGELEYMRADLLSGSKLYITHCCLT 442
            +V L    RC  GE+KAAAV+QVLQ+DPT V G+LEYMRADL SGS+LYIT C LT
Sbjct:    1 MVPLHDTGRCSTGEQKAAAVFQVLQMDPTFVGGDLEYMRADLFSGSRLYITSCSLT 56
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig193.27.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
D7G1J8_ECTSI1.880e-16267.25Hypothetical leucine rich repeat protein n=1 Tax=E... [more]
A0A6H5JNU7_9PHAE7.430e-13060.93Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FK13_ECTSI1.050e-4641.86Hypothetical leucine rich repeat protein n=2 Tax=E... [more]
A0A6H5JP38_9PHAE2.020e-1467.86Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePRINTSPR00019LEURICHRPTcoord: 597..610
score: 42.47
coord: 551..564
score: 55.48
NoneNo IPR availableGENE3D3.30.1490.310coord: 365..426
e-value: 1.4E-26
score: 94.9
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 164..185
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 41..100
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 37..148
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 619..657
NoneNo IPR availablePANTHERPTHR48057LEUCINE-RICH REPEAT SERINE/THREONINE-PROTEIN KINASE 1coord: 441..612
NoneNo IPR availablePANTHERPTHR48057LEUCINE-RICH REPEAT SERINE/THREONINE-PROTEIN KINASE 1coord: 383..567
NoneNo IPR availablePANTHERPTHR48057:SF5PROTEIN, PUTATIVE-RELATEDcoord: 383..567
coord: 441..612
NoneNo IPR availableSUPERFAMILY52058L domain-likecoord: 433..611
IPR003591Leucine-rich repeat, typical subtypeSMARTSM00369LRR_typ_2coord: 548..571
e-value: 6.7
score: 14.7
coord: 573..596
e-value: 230.0
score: 2.1
coord: 597..620
e-value: 57.0
score: 7.1
coord: 500..524
e-value: 44.0
score: 8.0
coord: 476..499
e-value: 200.0
score: 2.7
IPR032675Leucine-rich repeat domain superfamilyGENE3D3.80.10.10Ribonuclease Inhibitorcoord: 522..629
e-value: 6.7E-27
score: 96.1
IPR032675Leucine-rich repeat domain superfamilyGENE3D3.80.10.10Ribonuclease Inhibitorcoord: 351..520
e-value: 1.4E-26
score: 94.9
IPR001611Leucine-rich repeatPFAMPF13855LRR_8coord: 502..561
e-value: 3.1E-9
score: 36.4

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig193contigP-littoralis_Contig193:63480..88248 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig193.27.1mRNA_P-littoralis_Contig193.27.1Pylaiella littoralis U1_48mRNAP-littoralis_Contig193 63393..89881 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig193.27.1 ID=prot_P-littoralis_Contig193.27.1|Name=mRNA_P-littoralis_Contig193.27.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=658bp
MMYIVFLAFLYKLQGGSFISFVRAALGYDVEADKTPATPAKSGNDAFQKG
QRRPVQQSIAATTGYASDGAASNSSAPGDETTSLASRGLLTSSGGGTFSG
SYERLPSWGGDGDGGDEETGGGGDISGDKIVRRSISVNSDGGEYGGGSGA
RSLSISSDIIPATSDGEDLPVGPVKKRGPKSGRKSRLALGAGRGGGRQGW
GLSMKDRQVLKRRTVLARLTPIVLLSSFVNDLDLVTDWTFLKYGLAGAGE
VITQLALLFAVVGTVMWALSATEFSLMSKLKNMWKGNPLSRLQHVGLGWQ
LLANVILEDAPQFVITVITKPTSVTGVLNLCSSGLSLCAKVVHGISSQRA
PSLSTQFKMIDQDPAVTRNLFKLRDEAKKQAASAEKLVELAWINRCCVGE
KKAAAVYQVLQIDPTLVNGELEYMRADLLSGSKLYITHCCLTGPIPSKLG
DLKILQIVVLSANHLSGAIPTELGNLVNLKELSLNENALTGPIPVELSQL
SSLMVLNLSQNALTGPIPSELSGLSMLTLINLSCNELSGEIPRGLSKLSA
LQELDLSHNQLTGPIPKVFGARLHNLRTLRVGNNMLTGRVPMSLERLTQL
KSLDVGNNMLSAAEDTEDQLKRNLHPECSAVFHPQEEPEEEPAEESDPEL
QTEDLAA*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR003591Leu-rich_rpt_typical-subtyp
IPR032675LRR_dom_sf
IPR001611Leu-rich_rpt