mRNA_P-littoralis_Contig193.22.1 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig193.22.1 vs. uniprot
Match: D7G1J7_ECTSI (Ubiquinone Biosynthesis Monooxygenase COQ6 (C-terminal region) Ubiquinone Biosynthesis Monooxygenase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G1J7_ECTSI) HSP 1 Score: 743 bits (1918), Expect = 1.880e-259 Identity = 443/642 (69.00%), Postives = 474/642 (73.83%), Query Frame = 3
Query: 60 MLGSAAAAWKRPWIAAASKGTTSSRVVRSLSRVIGGLRDHPDKWEYDHDVLVVGGGIVGCTLACRLAQDIAATXXXXXXXXXXXXXXXLGGVNPTGGQKGADSRKNETQNRRRKRPSVGLIELRPPPSLEAALARDSPDPRVYSLAPASVEVLRDLGVWDGARRRGAGGCHGDGRGGGDESVAAVLKERSQTFGGMQVWDDRGSGHLRFDGEGKGA---ALGFISEHGVIHSSLFDRVGELDAAGLIELSCPSQASAQVKRIAFPPVGPGGATGPLKVAVEGAGGETSEVSCRLLVAADGGGSKARIGKSRRFLGEGVAKMMGLPSFGWGYGQRAVVATVKLSESHGEMAFQRYLSRGPLAMLPLEGGKSASLVWSTTPEHAESLKSMTETEFLKEVNDALRLPPTIGITSSERSSECSSEFSPPPPSSSSWPAPTFFSGTVQENI-PGAVLGGVSSLAALPFAAASALGEGFAKGAEGVAGALAGLSLGLQ--GGXXXXXGFRTPPEAVEVMTPRLGFDLSLRQAHRYTGDRMALVGDAAHTVHPMAGQGLNLGIADADALARAVLEGRSSGTDVGSKTLLGRYEEERKTEALVMMGALDVLHRLFGSDARAVAAVRSAGLSALNAAGPIKRRLARHAMGG 1967
MLGS A W+ +AA S+ T R R+ S GL D WEYDHDVLVVGGGIVGCTLACRLA+D+++T G+ P K P+VGLIE RPPPSLEAALAR +PDPRVYSLAP+SVE+L LGVWD GGG VLK RSQ FGGMQVWDDRG+GHLRFDGEGKG ALGFISEHGVIHSSLF+RV EL+A GL EL+CP AQVKR+ FPPVG GGATGPL V VE A GETS+ +CRLLVAADGG SK VAKMMGL SFGWGYGQRAVVATVKL+ESHGE+AFQRYLSRGPLAMLPL GGK ASLVWSTTPEHAESLKSM+ TEF+KEVNDALRLPPTIG + PSSS+ PA FSGTV + GGVSSLAALPFA ASALGEG AKGAEG+AGALAGLSLGLQ G GF TPPEA EV+TPRLGFDLSLRQAH+YTGDRMALVGDAAHTVHPMAGQGLNLGIADADALARAVLEGR SGTDVGSKTLLGRYEEERKTEALVMMGALDVLHRLFGSDARAVAA RSAGLSALNAAGP+KRRLARHAMGG
Sbjct: 1 MLGSGMA-WRHSRVAA-SRNMTRLRSHRAFSSAPAGLGDKAAGWEYDHDVLVVGGGIVGCTLACRLAKDLSSTTPSTI------------GLPPLSTGKDDGXXXXXXXXXXXXXPAVGLIEARPPPSLEAALARGAPDPRVYSLAPSSVEILGKLGVWD--------------EGGG------VLKGRSQPFGGMQVWDDRGAGHLRFDGEGKGGKTTALGFISEHGVIHSSLFERVRELEADGLAELTCP----AQVKRVTFPPVGAGGATGPLTVTVETASGETSDTTCRLLVAADGGDSK-------------VAKMMGLSSFGWGYGQRAVVATVKLAESHGEVAFQRYLSRGPLAMLPLPGGKLASLVWSTTPEHAESLKSMSTTEFVKEVNDALRLPPTIGTS----------------PSSSAEPAS--FSGTVPPFAGEHGLFGGVSSLAALPFATASALGEGVAKGAEGIAGALAGLSLGLQEGAGDGGRGGFCTPPEATEVVTPRLGFDLSLRQAHKYTGDRMALVGDAAHTVHPMAGQGLNLGIADADALARAVLEGRLSGTDVGSKTLLGRYEEERKTEALVMMGALDVLHRLFGSDARAVAAARSAGLSALNAAGPLKRRLARHAMGG 573
BLAST of mRNA_P-littoralis_Contig193.22.1 vs. uniprot
Match: A0A6H5KUH3_9PHAE (FAD_binding_3 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KUH3_9PHAE) HSP 1 Score: 590 bits (1521), Expect = 5.270e-201 Identity = 346/460 (75.22%), Postives = 366/460 (79.57%), Query Frame = 3
Query: 648 QVWDDRGSGHLRFDGEGKG---AALGFISEHGVIHSSLFDRVGELDAAGLIELSCPSQASAQVKRIAFPPVGPGGATGPLKVAVEGAGGETSEVSCRLLVAADGGGSKARIGKSRRFLGEG--------------VAKMMGLPSFGWGYGQRAVVATVKLSESHGEMAFQRYLSRGPLAMLPLEGGKSASLVWSTTPEHAESLKSMTETEFLKEVNDALRLPPTIGITSSERSSECSSEFSPPPPSSSSWPAPTFFSGTVQENIPG-AVLGGVSSLAALPFAAASALGEGFAKGAEGVAGALAGLSLGLQ--GGXXXXXGFRTPPEAVEVMTPRLGFDLSLRQAHRYTGDRMALVGDAAHTVHPMAGQGLNLGIADADALARAVLEGRSSGTDVGSKTLLGRYEEERKTEALVMMGALDVLHRLFGSDARAVAAVRSAGLSALNAAGPIKRRLARHAMGG 1967
+VWDDRG+GHLRFDGEGKG AALGFISEH VIHSSLF+RV E +A GL EL+C QVKR+ FPPVG GGATGPL V VE A GETS+ +CRLLVAADGG SKAR +RRF G VAKMMGL SFGWGYGQRAVVATVKL+ESHGE+AFQRYLSRGPLAMLPL GGK ASLVWSTTP HAESLKSM+ TEF+KEVNDALRLPPTIG + PSSS+ PA FSGTV + G VSSLAALPFA ASALGEGFAK AEGVAGALAGLSLGLQ G GF TPPEAVEV+TPRLGFDLSLRQAHRYTG RMALVGDAAHTVHPMAGQGLNLGIADADALARAVLEGR SGTDVGS TLLG YE++RKTEALVMMGALDVLHRLFGSDARAVAA RSAGLSALNAAGP+KRRLARHAMGG
Sbjct: 42 KVWDDRGAGHLRFDGEGKGGRTAALGFISEHSVIHSSLFERVREFEADGLAELACM-----QVKRVTFPPVGAGGATGPLTVTVETASGETSDTTCRLLVAADGGDSKAR---NRRFYLRGPKSFASSLRGCRPRVAKMMGLSSFGWGYGQRAVVATVKLAESHGEVAFQRYLSRGPLAMLPLPGGKLASLVWSTTPVHAESLKSMSTTEFVKEVNDALRLPPTIGTS----------------PSSSAEPAS--FSGTVPPFAGDHGLFGRVSSLAALPFATASALGEGFAKSAEGVAGALAGLSLGLQEGAGGGGTGGFCTPPEAVEVVTPRLGFDLSLRQAHRYTGARMALVGDAAHTVHPMAGQGLNLGIADADALARAVLEGRLSGTDVGSTTLLGHYEQDRKTEALVMMGALDVLHRLFGSDARAVAAARSAGLSALNAAGPLKRRLARHAMGG 475
BLAST of mRNA_P-littoralis_Contig193.22.1 vs. uniprot
Match: A0A835Z6E6_9STRA (Ubiquinone biosynthesis monooxygenase COQ6, mitochondrial n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z6E6_9STRA) HSP 1 Score: 293 bits (750), Expect = 5.590e-86 Identity = 230/613 (37.52%), Postives = 293/613 (47.80%), Query Frame = 3
Query: 189 WEYDHDVLVVGGGIVGCTLACRLAQDIAATXXXXXXXXXXXXXXXLGGVNPTGGQKGADSRKNETQNRRRKRPSVGLIELRPPPSLEAALARDSPDPRVYSLAPASVEVLRDLGVWDGARRRGAGGCHGDGRGGGDESVAAVLKERSQTFGGMQVWDDRGSGHLRFDGEGKGA--------ALGFISEHGVIHSSLFDRVGELDAAGLIELSCPSQASAQVKRIAF--PPVGPGGATGPLKVAVEGAGGETSEVSCR-------LLVAADGGGSKARIGKSRRFLGEGVAKMMGLPSFGWGYGQRAVVATVKLSES-HGEMAFQRYLSRGPLAMLPLEGGKSASLVWSTTPEHAESLKSMTETEFLKEVNDALRLPPTIGITSSERSSECSSEFSPPPPSSSSWPAPTFFSGTVQENIPGAVLGGVSSLAALPFAAASALGEGFAKGAEGVAGALAGLSLGLQGGXXXXXGFRTP---PEAVEVMTPRLGFDLSLRQAHRYTGDRMALVGDAAHTVHPMAGQGLNLGIADADALARAVLEGRSSGTDVGSKTLLGRYEEERKTEALVMMGALDVLHRLFGSDARAVAAVRSAGLSALNAAGPIKRRLARHAMG 1964
W+YD+DVLVVGGGIVG LAC+LA+ + GG +GL+E R PP++ +AR +PD RVY+LAP+SV L +G W A + R+ F M VWD RG G LRFD A ALG +EH + ++LF+R+ L A G + L CP + +A R PP GP++ + G L+VAADGG SK R ++ GL SFGWGYGQRAVV TV L A+QRYL RGPLA+LPL G AS+VWSTTPE AE LK++ FL+ +N ALR + +PPPP PFA LG A+GA XXXX G T P AV + PRLGFDLSL Q+ YT R+ALVGDAAHTVHPMAGQGLNLG++DA+ALA A+ E SG D+GS L RY+ +R+ M+G LD LHR+F + A VA R+AG++ ++A+ +K +AR AMG
Sbjct: 31 WDYDYDVLVVGGGIVGAALACKLAE-----------------------IPKAGGSF-----------------KIGLVEGRAPPTVADVMARPTPDARVYTLAPSSVHFLDSVGAW------------------------AAVAPRAHAFSRMHVWDARGRGALRFDARTAAASASAAAPPALGHTAEHTALQAALFERLRALHADGALALLCPRELAALDFRGTEREPP-------GPMRATLSGXXXXXXXXXXXXXXXXXXLVVAADGGASKVR-------------RLRGLRSFGWGYGQRAVVCTVALERGGDAATAWQRYLPRGPLALLPLWDG-FASVVWSTTPEEAEELKALPPGAFLERLNAALR-----------------GDAAPPPP---------------------------------PFAGIPLLGAA-AEGAANXXXXXXXXXXXXXXXXXXXSGGDTAVVSPLAVGLPGPRLGFDLSLAQSAAYTAPRVALVGDAAHTVHPMAGQGLNLGLSDAEALAAAIREAALSGGDIGSVQALSRYDSDRRMRNAAMLGGLDALHRVFATGAAPVALARNAGMALIDASPQLKAAIARVAMG 507
BLAST of mRNA_P-littoralis_Contig193.22.1 vs. uniprot
Match: W7U180_9STRA (Ubiquinone biosynthesis monooxygenase coq6 n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7U180_9STRA) HSP 1 Score: 273 bits (698), Expect = 4.060e-78 Identity = 228/656 (34.76%), Postives = 297/656 (45.27%), Query Frame = 3
Query: 141 RSLSRVIGGLRDH---PDKWEYDHDVLVVGGGIVGCTLACRLAQDIAATXXXXXXXXXXXXXXXLGGVNPTGGQKGADSRKNETQNRRRKRPSVGLIELRPPPSLEAALARDS-PDPRVYSLAPASVEVLRDLGVWDGARRRGAGGCHGDGRGGGDESVAAVLKERSQTFGGMQVWDDRGSGHLRFD------------------GEGKGAA-LGFISEHGVIHSSLFDRVGELDAAGLIELSCPSQASAQVKRIAFPPVGPGGATGPLKVAVEGAGGETSEVSCRLLVAADGGGSKARIGKSRRFLGEGVAKMMGLPSFGWGYGQRAVVATVKLSE---------------------SHGEM----AFQRYLSRGPLAMLPLEGGKSASLVWSTTPEHAESLKSMTETEFLKEVNDALRLPPTIGITSSERSSECSSEFSPPPPSSSSWPAPTFFSGTVQENIPGAVLGGVSSLAALPFAAASALGEGFAKGAEGVAGALAGLSLGLQGGXXXXXGFRTPPEAVEVMTPRLGFDLSLRQAHRYTGDRMALVGDAAHTVHPMAGQGLNLGIADADALARAVLEGRSSGTDVGSKTLLGRYEEERKTEALVMMGALDVLHRLFGSDARAVAAVRSAGLSALNAAGPIKRRLARHAMG 1964
R + R+ H D W+YD V+++GGGIVG +LAC LA+++ +R + L+E+RPPP L A LA D PDPRVY+LAPASV L LG W ++K+R + + MQVW+ GSG +RFD GEGK LG ++E+ + ++LF + L A GL+E+ CP QV+ IAF G TGP +V G G S+V+ RLLV ADG S+ V K GLPS+GW Y QRAVVATV L E SH A+Q +L +GPLA LPL G S+VWSTTP A+ LK++ FL E+N L+ P IG+ PPS F V + + A++G + ++ +AA LS G F P +V PRL FDL A Y G R ALVGDAAHT+HPMAGQGLNLG+ADA AL+ + G G DVGS L RY+ R+ L M+G L LH LFG + +R+ GL LNA P+K ++A AMG
Sbjct: 17 RCIGRLFSSTAPHGTSTDSWDYD--VIILGGGIVGASLACSLAENVG----------------------------------------QRHGMKIALLEIRPPPPLAACLAPDRLPDPRVYALAPASVAFLESLGAWQ------------------------LIKDRKRDYQYMQVWEGGGSGSIRFDAAKAKVMGLGSTRAEGSNGEGKERKKLGTMAENSTLQAALFQCMISLQAQGLLEVLCP----VQVEAIAFDTSGTD-PTGPARVTWAGKDGVRSQVTTRLLVGADGAASR-------------VKKARGLPSWGWDYAQRAVVATVSLDEQADAADAPSPRPSTTLSANKLSHSSSSPATAWQTFLPQGPLAFLPL-WGPYHSIVWSTTPAEADRLKALPREAFLAELNAKLQCP--IGLLD--------------PPS---------FPSYVPQPLVKALVGAHHLVESVVVSAA--------------------LSQG----------FHVAPIVRDVCGPRLSFDLRAEHASAYVGARAALVGDAAHTIHPMAGQGLNLGLADAMALSTLIEAGVVEGQDVGSPLFLRRYQNARQAANLGMLGGLTALHGLFGRKEGSWRWLRNVGLGTLNALDPVKAKMAEVAMG 532
BLAST of mRNA_P-littoralis_Contig193.22.1 vs. uniprot
Match: A0A7S2S5V6_9STRA (Ubiquinone biosynthesis monooxygenase COQ6, mitochondrial n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2S5V6_9STRA) HSP 1 Score: 263 bits (673), Expect = 8.640e-75 Identity = 209/640 (32.66%), Postives = 295/640 (46.09%), Query Frame = 3
Query: 135 VVRSLSRVIGGLRDH---------------------PDKWEYDHDVLVVGGGIVGCTLACRLAQDIAATXXXXXXXXXXXXXXXLGGVNPTGGQKGADSRKNETQNRRRKRPSVGLIELRPPPSLEAALARDSP-DPRVYSLAPASVEVLRDLGVWDGARRRGAGGCHGDGRGGGDESVAAVLKERSQTFGGMQVWDDRGSGHLRFDGEGKGAA----LGFISEHGVIHSSLFDRVGELDAAGLIELSCPSQASAQVKRIAFP--PVG-PGGATGPLKVAVEGAGGETSEVSCRLLVAADGGGSKARIGKSRRFLGEGVAKMMGLPSFGWGYGQRAVVATVKLSESHGEMAFQRYLSRGPLAMLPLEGGKSASLVWSTTPEHAESLKSMTETEFLKEVNDALRLPPTIGITSSERSSECSSEFSPPPPSSSSWPAPTFFSGTVQENIPGAVLGGVSSLAALPFAAASALGEGFAKGAEGVAGALAGLSLGLQGGXXXXXGFRTPPEAVEVMTPRLGFDLSLRQAHRYTGDRMALVGDAAHTVHPMAGQGLNLGIADADALARAVLEGRSSGTDVGSKTLLGRYEEERKTEALVMMGALDVLHRLFGSDARAVAAVRSAGLSALNAAGPIKRRLARHAMGG 1967
VVR+ R++ G+R H + +DHDV VVGGG+VG A RLA+ G N +G++E RPPP LE AL+ +P D R Y++ P S + LR LGVW ER Q + MQ+W+ G G++RFD LG I E+ + ++LF R+ EL+A G + L CP AQV ++FP P G P GP ++ + G + +++ RL++AADG S R + G+P++GWGYGQ+AVVATV+L + H + A+QR++ GP+A+LPL+G AS+VWST A L +++T+F+K +N AL P S +S++ P P V SL A AA G+ F + PE V + R DLSL QA YTG+R+ L+GDAAHTVHP+AGQGLNLG+ DA+ + + +GTD+GS L YE RK L MM LD +HRLF + + +R+ G+S LNAA P+K ++ + AMGG
Sbjct: 13 VVRAGGRLVEGVRRHLSRTAATAAXXXXGPTSGPRASSELNWDHDVTVVGGGVVGAAAAIRLAES-----------------SIFQGSN------------------------IGVVETRPPPGLEEALSPATPPDVRTYAMTPGSEKFLRSLGVWQ----------------------LLEEAERLQPYSAMQIWEWGGDGYMRFDSHNHAPHEQQHLGTIVENRALQAALFHRLKELEANGRVTLYCP----AQVASMSFPTAPRGDPNSPIGPARLRLVSEGMDL-DLTSRLVLAADGAKSPTR-------------QAAGIPTWGWGYGQKAVVATVELQQ-HTDTAWQRFIRSGPIAILPLKG-PYASIVWSTDTAEANHLAKLSDTDFVKALNGALAAP----------SEPFASQYLPTP------------------------FAMVDSLLATASRAARLTGD---------------------------QAFESAPEVCAVASRRFALDLSLSQARTYTGNRLCLLGDAAHTVHPLAGQGLNLGLGDAEHICEVIEAAARAGTDIGSPQHLISYEHTRKLANLQMMALLDGIHRLFAVEPGPLRWLRNTGMSVLNAAPPVKSQVVKFAMGG 508
BLAST of mRNA_P-littoralis_Contig193.22.1 vs. uniprot
Match: A0A4D9CX62_9STRA (FAD_binding_3 domain-containing protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CX62_9STRA) HSP 1 Score: 214 bits (544), Expect = 9.090e-58 Identity = 176/484 (36.36%), Postives = 227/484 (46.90%), Query Frame = 3
Query: 645 MQVWDDRGSGHLRFD------------------GEGKGAA-LGFISEHGVIHSSLFDRVGELDAAGLIELSCPSQASAQVKRIAFPPVGPGGATGPLKVAVEGAGGETSEVSCRLLVAADGGGSKARIGKSRRFLGEGVAKMMGLPSFGWGYGQRAVVATVKLSE---------------------SHGEM----AFQRYLSRGPLAMLPLEGGKSASLVWSTTPEHAESLKSMTETEFLKEVNDALRLPPTIGITSSERSSECSSEFSPPPPSSSSWPAPTFFSGTVQENIPGAVLGGVSSLAALPFAAASALGEGFAKGAEGVAGALAGLSLGLQGGXXXXXGFRTPPEAVEVMTPRLGFDLSLRQAHRYTGDRMALVGDAAHTVHPMAGQGLNLGIADADALARAVLEGRSSGTDVGSKTLLGRYEEERKTEALVMMGALDVLHRLFGSDARAVAAVRSAGLSALNAAGPIKRRLARHAMG 1964
MQVW+ GSG +RFD GEGK LG ++E+ + ++LF + L A GL+E+ CP QV+ IAF G TGP +V G G S+++ RLLV ADG S+ V K GLPS+GW Y QRAVVATV L E SH A+Q +L +GPLA+LPL G S+VWSTTP A+ LK++ FL E+N L+ P IG+ PPS F V + + A++G + ++ +AA GF P +V PRL FDL A Y G R ALVGDAAHT+HPMAGQGLNLG+ADA AL+ + G G DVGS L RY+ R+ L M+G L LH LFG + +R+ GL LNA P+K ++A AMG
Sbjct: 1 MQVWEGGGSGSIRFDAAKAKLMGLGSTRAEGSNGEGKERKKLGTMAENSTLQAALFQCMTSLQAQGLLEVLCP----VQVEAIAFDTSGTD-PTGPARVTWAGKDGVRSQLTTRLLVGADGAASR-------------VKKARGLPSWGWDYAQRAVVATVSLDEQADAADAPSPRPSTTLSANKSSHSNSSPATAWQTFLPQGPLALLPL-WGPYHSIVWSTTPAEADRLKALPREAFLAELNAKLQCP--IGLLD--------------PPS---------FPSYVPQPLVKALVGAHHLVESVVVSAA------------------------------LNQGFHVAPLVRDVCGPRLSFDLRAEHASAYVGARAALVGDAAHTIHPMAGQGLNLGLADAMALSTLIEAGVVEGQDVGSPLFLRRYQNARQAANLGMLGGLTALHGLFGRKEGSWRWLRNVGLGTLNALDPVKAKMAEVAMG 410
BLAST of mRNA_P-littoralis_Contig193.22.1 vs. uniprot
Match: A0A0P1AJ38_PLAHL (Ubiquinone biosynthesis monooxygenase COQ6, mitochondrial n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1AJ38_PLAHL) HSP 1 Score: 214 bits (544), Expect = 3.440e-57 Identity = 185/593 (31.20%), Postives = 269/593 (45.36%), Query Frame = 3
Query: 201 HDVLVVGGGIVGCTLACRLAQDIAATXXXXXXXXXXXXXXXLGGVNPTGGQKGADSRKNETQNRRRKRPSVGLIELRPPPSLEAALARDSPDPRVYSLAPASVEVLRDLGVWDGARRRGAGGCHGDGRGGGDESVAAVLKERSQTFGGMQVWDDRGSGHLRFDGEGKGA-ALGFISEHGVIHSSLFDRVGEL----DAAGLIELSCPSQASAQVKRIAFPPVGPGGATGPLKVAVEGAGGETSEVSCRLLVAADGGGSKARIGKSRRFLGEGVAKMMGLPSFGWGYGQRAVVATVKLSESHGEMAFQRYLSRGPLAMLPLEGGKSASLVWSTTPEHAESLKSMTETEFLKEVNDALRLPPTIGITSSERSSECSSEFSPPPPSSSSWPAPTFFSGTVQENIPGAVLGGVSSLAALPFAAASALGEGFAKGAEGVAGALAGLSLGLQGGXXXXXGFRTPPEAVEVMTPRLGFDLSLRQAHRYTGDRMALVGDAAHTVHPMAGQGLNLGIADADALARAVLEGRSSGTDVGSKTLLGRYEEERKTEALVMMGALDVLHRLFGSDARAVAAVRSAGLSALNAAGPIKRRLARHAMG 1964
+DV+VVGGG+VG LAC+L G N V +IE PP + ++ DSPD RV+++ PAS +L +G W G DG+ F MQVWD G GH+RFD + G ALG++ EH V+ +L DR+ +L D + ++L CP A+VK P + +G + +E + + L+VAADGG S R + L ++GW Y Q+AVVATVK ++ E A+QR+ GP+A+LP+ G S S+VWS + E A+ L + EF+ +N A PP + PP +P S V+ GV AA +A+AL E F PP+A++ + R + L L A +Y +ALVGD+AHT+HP+AGQGLNLG+ D +AL+ ++EG SG ++ S+ L +YE ER + + M A+D RLFG AV+ R+ G+ LNA P+K + ++AMG
Sbjct: 30 YDVVVVGGGLVGSALACQLKSH-----------------PMFKGKN------------------------VAVIEPAAPP-VAPSVEEDSPDLRVFTITPASRNLLESIGAW---------GLIADGQ--------------KTAFKDMQVWDAMGDGHIRFDSKTLGKDALGYVVEHRVLVRALHDRMSQLAAETDDSAPLKLYCP----AKVKHFQRPTI----VSGISSIGLE----DGQRLKADLVVAADGGNSIVRT-------------LSALGTWGWDYDQQAVVATVK-TDRLNETAWQRFYPTGPVALLPMRDGYS-SVVWSCSAEMAKELTELNSDEFVVRLNAAFSAPPISTV----------------PPE---FPGIPLLSDLVK---------GVHD-AANTLMSAAALTEPFV----------------------------APPKAIDAVGLRFAYPLKLMHATKYIKPGVALVGDSAHTIHPLAGQGLNLGLGDVNALSNLLIEGVKSGKNLSSEYFLQQYESERLKDNITMQLAMDGFKRLFGPTPDAVSVARNVGMGTLNAVEPLKNHIMKYAMG 473
BLAST of mRNA_P-littoralis_Contig193.22.1 vs. uniprot
Match: A0A7S0IF53_MICPS (Ubiquinone biosynthesis monooxygenase COQ6, mitochondrial n=3 Tax=Micromonas TaxID=38832 RepID=A0A7S0IF53_MICPS) HSP 1 Score: 214 bits (546), Expect = 7.380e-57 Identity = 185/531 (34.84%), Postives = 248/531 (46.70%), Query Frame = 3
Query: 408 SVGLIELRPPPSLEAALARD---SPDPRVYSLAPASVEVLRDLGVWDGARRRGAGGCHGDGRGGGDESVAAVLKERSQTFGGMQVWDDRGSGHLRFDGEGKGAA-LGFISEHGVIHSSLFDRVGELDA-----AGLIELSCPSQASAQVKRIAFPPVGPGGATGPLKVAVEGAGGETSEVSCRLLVAADGGGSKARIGKSRRFLGEGVAKMMGLPSFGWGYGQRAVVATVKLSESHGEMAFQRYLSRGPLAMLPL-EGGKSASLVWSTTPEHAESLKSMTETEFLKEVNDALRLPPTIGITSSERSSECSS-EFSPPPPSSSSWPAPTFFSGTVQENIPGAVLGGVSSLAALPFAAASALGEGFAKGAEGVAGALAGLSLGLQGGXXXXXGFRTPPEAVEVMTPRLGFDLSLRQAHRYTGDRMALVGDAAHTVHPMAGQGLNLGIADADALARAVLEGRSSGTDVGSKTLLGRYEEERKTEALVMMGALDVLHRLFGSDARAVAAVRSAGLSALNAAGPIKRRLARHAMGG 1967
+V L + PPP+ +A D +P+PRV +L PASV +LRD+G WD R+ F MQVWD GH+R+D GA LG + E+ V+H++L + L A + L P+ + I F G G G + E E EV RL+V ADG S+ R + GL + GW YG +A V TV E H A+QR+L GPLA+LP+ E G+ +++VW+TTPE A+ L + + F EV+ ALR G S E + E P + G QE + +L + AA A+ GF G G F PP V PR F L+ A RY R+ALVGDAAH VHP+ GQG+NLG+ D +L A+ ++G DVGS +L Y + + MM ALD L RLF SD VA R AGL+ +NA GPI+RR+AR+AMGG
Sbjct: 70 TVSLADRAPPPA--SAWLDDPPPTPEPRVSALTPASVALLRDVGAWD----------------------RVEASRRACAFRAMQVWDAEAVGHVRYDASEVGATELGHVVENRVVHTALHEAARRLGVQTSPPAAAVALDLPADGGGDLATIKFRREGRDG--GGDENGDEDGTPEIEEVRARLVVGADGPSSEVRT-------------LAGLRAAGWRYGLKAAVGTVATDEPH-RTAWQRFLPTGPLALLPVTEDGRVSNVVWTTTPEEADRLCGLCDEAFAAEVDAALR---GEGRHSHGGQGEVGTGEGKRRRPGFVYGFEGQWLMGEAQERLVDVLLKPATE------AAIRAVANGF----------------GGAAGDDAPPPFEHPPRVVAAAGPRGAFPLATSLAGRYALRRLALVGDAAHQVHPLGGQGVNLGMRDVVSLTDALAAACANGGDVGSMLVLRGYADAANDANVPMMAALDGLQRLFASDQPLVAWARGAGLAGVNALGPIRRRIARYAMGG 535
BLAST of mRNA_P-littoralis_Contig193.22.1 vs. uniprot
Match: A0A7I4CUP6_PHYPA (Ubiquinone biosynthesis monooxygenase COQ6, mitochondrial n=3 Tax=Physcomitrium patens TaxID=3218 RepID=A0A7I4CUP6_PHYPA) HSP 1 Score: 211 bits (536), Expect = 5.640e-56 Identity = 169/519 (32.56%), Postives = 242/519 (46.63%), Query Frame = 3
Query: 411 VGLIELRPPPSLEAALARDSPDPRVYSLAPASVEVLRDLGVWDGARRRGAGGCHGDGRGGGDESVAAVLKERSQTFGGMQVWDDRGSGHLRFDGEGKGA-ALGFISEHGVIHSSLFDRVGELDAAGLIELSCPSQASAQVKRIAFPPVGPGGATGPLKVAVEGAGGETSEVSCRLLVAADGGGSKARIGKSRRFLGEGVAKMMGLPSFGWGYGQRAVVATVKLSESHGEMAFQRYLSRGPLAMLPLEGGKSASLVWSTTPEHAESLKSMTETEFLKEVNDALRLPPTIGITSSERSSECSSEFSPPPPSSSSWPAPTFFSGTVQENIPGAVLGGVSSLAALPFAAASALGEGFAKGAEGVAGALAGLSLGLQGGXXXXXGFRTPPEAVEVMTPRLGFDLSLRQAHRYTGDRMALVGDAAHTVHPMAGQGLNLGIADADALARAVLEGRSSGTDVGSKTLLGRYEEERKTEALVMMGALDVLHRLFGSDARAVAAVRSAGLSALNAAGPIKRRLARHAMG 1964
V +I+ P + + PD RV ++ PA+V +++G W ESV A + F MQVWD G G+ R+ + GA LG++ E+ V+ +L R+ + AG ++ CP AQVK + P G P A G + + RL+V ADGG S R G + GW Y Q AV+ TV++ +H AFQR+L GP A+LPL S ++VW+TTPE A++LK+M+ +F+ E N AL + P P S + G V + P +LG + A+ PF + PP V+ TPRL F LSL A Y G R+ALVGDAAHTVHP+AGQG+NLG DA +L++ + +G +G D+G LL YE ERK L MM LD +++ SD + RS G +A++A GP+K+++ +AMG
Sbjct: 74 VAIIDSSKPMAAPKHDPKAVPDQRVSAITPATVRFFKEVGAW--------------------ESVQAAMPT---PFDAMQVWDYEGLGYTRYTADDVGAYVLGYVVENKVLLGALRSRI---ENAGSVDFICP----AQVKSVLLPTPSGQGLDSPQDRAEVGLN-DGRSLRARLVVGADGGRSAVRA-------------TAGFQTRGWEYKQSAVICTVRVETNHAT-AFQRFLPTGPFALLPLNDTYS-NIVWTTTPEKADALKTMSAEQFVVEANKALI-----------------DDHGPKPGSKIAE-----IVGNVVTSSP--LLGAMGPSASEPF--------------------------------------QEPPRIVDCATPRLSFPLSLMHASNYVGHRVALVGDAAHTVHPLAGQGVNLGFGDAASLSKVLQKGVETGHDIGQIDLLEEYERERKRTNLTMMAILDGFQKMYSSDFGPLKYARSFGFNAVHALGPLKKQIISYAMG 484
BLAST of mRNA_P-littoralis_Contig193.22.1 vs. uniprot
Match: A0A835YJF8_9CHLO (Ubiquinone biosynthesis monooxygenase COQ6, mitochondrial n=1 Tax=Edaphochlamys debaryana TaxID=47281 RepID=A0A835YJF8_9CHLO) HSP 1 Score: 197 bits (500), Expect = 5.500e-51 Identity = 186/537 (34.64%), Postives = 256/537 (47.67%), Query Frame = 3
Query: 387 NRRRKRPSVGLIELRPPPSLEAALARDSPDPRVYSLAPASVEVLRDLGVWDGARRRGAGGCHGDGRGGGDESVAAVLKERSQTFGGMQVWDDRGSGHLRFDGEGKGAA-LGFISEHGVIHSSLFDRVGELDAAGLIELSCPSQASAQVKRIAFPPVG----PGGATGPLKVAVEGAGGETSEVSCRLLVAADGGGSKARIGKSRRFLGEGVAKMMGLPSFGWGYGQRAVVATVKLSESHGEMAFQRYLSRGPLAMLPLEGGKSASLVWSTTPEHAESLKSMTETEFLKEVNDALRLPPTIGITSSERSSECSSEFSPPPPSSSSWPAPTFFSGTVQENIPGAVLGGVSSLAALPFAAASALGEGFAKGAEGVAGALAGLSLGLQGGXXXXXGFRTPPEAVEVM--TPRLGFDLSLRQAHRYTGDRMALVGDAAHTVHPMAGQGLNLGIADADALARAVLEGRSSGTDVGSKTLLGR-YEEERKTEALVMMGALDVLHRLFGSDARAVAAVRSAGLSALNAAGPIKRRLARHAMGGGT 1973
NR ++ V +++++P P + P RV ++ P S+ VL+ G W E V A+ S F MQVWD GH+R+ G +G ++E+ ++ +SL + G E P A+++ + P PG + G ++ + A G T + RL+VAADG S+ R +M GL ++GWGYGQR VVATV +E H AFQR+L GPLA+LP+ GG S S+VWSTTPE A +L+++ EF VN AL PP +S F+P VSSLA ALG GA XXXX +R PP AVE++ +P+ F L L+QA R+ R+ALVGDAAH VHP+AGQG+NLG+ DA ALA A+ + G+D G LLG YE R+ L M A+D + R F A AAVR GL +NA GP++ + +AM G T
Sbjct: 71 NRMTQQMRVAVLDVKPQPL--SFTPAPVPGLRVSTITPGSIGVLKAAGAW--------------------EEVEAL----SAPFVDMQVWDAAAPGHIRWSARDLGEERMGVVAENPLLQASLLRAAQR--SGGRTEFLWP----AELRGLRLPDEQGRPHPGCSHGLAELDL--ADGRT--LVARLVVAADGSASRVR-------------QMAGLRTWGWGYGQRGVVATVSTAEPH-VTAFQRFLPTGPLALLPVRGGLS-SIVWSTTPEAAAALEALGPREFAAAVNKALLDPPA----------SAASGFAP-----------------------------VSSLA-------EALGRMVGAGAX-----------------XXXXXWREPPRAVELVGSSPK-SFPLQLKQAGRFVLPRLALVGDAAHAVHPLAGQGVNLGLGDAGALAEALRGAVAGGSDPGDARLLGEAYEAPRRRAVLAMTAAMDGVKRAFAVQAPPFAAVRGLGLGLINAVGPVRNGIMNYAMMGNT 492 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig193.22.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig193.22.1 >prot_P-littoralis_Contig193.22.1 ID=prot_P-littoralis_Contig193.22.1|Name=mRNA_P-littoralis_Contig193.22.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=640bp MLGSAAAAWKRPWIAAASKGTTSSRVVRSLSRVIGGLRDHPDKWEYDHDVback to top mRNA from alignment at P-littoralis_Contig193:35213..46509- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig193.22.1 ID=mRNA_P-littoralis_Contig193.22.1|Name=mRNA_P-littoralis_Contig193.22.1|organism=Pylaiella littoralis U1_48|type=mRNA|length=11297bp|location=Sequence derived from alignment at P-littoralis_Contig193:35213..46509- (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig193:35213..46509- >mRNA_P-littoralis_Contig193.22.1 ID=mRNA_P-littoralis_Contig193.22.1|Name=mRNA_P-littoralis_Contig193.22.1|organism=Pylaiella littoralis U1_48|type=CDS|length=1920bp|location=Sequence derived from alignment at P-littoralis_Contig193:35213..46509- (Pylaiella littoralis U1_48)back to top |