prot_P-littoralis_Contig192.104.1 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig192.104.1
Unique Nameprot_P-littoralis_Contig192.104.1
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length169
Homology
BLAST of mRNA_P-littoralis_Contig192.104.1 vs. uniprot
Match: A0A6H5KQP3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KQP3_9PHAE)

HSP 1 Score: 179 bits (453), Expect = 2.210e-55
Identity = 96/104 (92.31%), Postives = 99/104 (95.19%), Query Frame = 0
Query:    1 MSDAGGGSAASAPDAGGSPGTSTLAPGSSTQDAQQDNEVVVVPGSTSGGAPQESVNVKRPAPVFHVGGGEYDVPEATKNAVASFVVPAGFQQEGAREDSFLFSL 104
            MSDA GGSAASAPDAGGSPGTSTLAPGSSTQDAQQDNEVVVVPGSTSGGAPQ+SVNVKRP PVF   GGEYDVPEATKNAVASFVVPAGFQQEGAREDSF++SL
Sbjct:    1 MSDASGGSAASAPDAGGSPGTSTLAPGSSTQDAQQDNEVVVVPGSTSGGAPQQSVNVKRPPPVFRASGGEYDVPEATKNAVASFVVPAGFQQEGAREDSFMYSL 104          
BLAST of mRNA_P-littoralis_Contig192.104.1 vs. uniprot
Match: A0A6H5KS21_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KS21_9PHAE)

HSP 1 Score: 189 bits (479), Expect = 2.320e-55
Identity = 100/110 (90.91%), Postives = 104/110 (94.55%), Query Frame = 0
Query:    1 MSDAGGGSAASAPDAGGSPGTSTLAPGSSTQDAQQDNEVVVVPGSTSGGAPQESVNVKRPAPVFHVGGGEYDVPEATKNAVASFVVPAGFQQEGAREDSFLFSLGNYYVP 110
            MSDA GGSAAS PDAGGSPGTSTLAPGSSTQDAQQDNEVVVVPGSTSGGAPQ+SVNVKRPAPVF V GGEYDVPEATKNAVA+FVVP GFQQEGAREDSF++SLGNY VP
Sbjct:    1 MSDASGGSAASTPDAGGSPGTSTLAPGSSTQDAQQDNEVVVVPGSTSGGAPQQSVNVKRPAPVFRVSGGEYDVPEATKNAVAAFVVPTGFQQEGAREDSFMYSLGNYCVP 110          
BLAST of mRNA_P-littoralis_Contig192.104.1 vs. uniprot
Match: A0A6H5JJJ9_9PHAE (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JJJ9_9PHAE)

HSP 1 Score: 108 bits (269), Expect = 3.610e-24
Identity = 55/118 (46.61%), Postives = 76/118 (64.41%), Query Frame = 0
Query:   47 SGGAPQESVNVKRPAPVFHVGGGEYDVPEATKNAVASFVVPAGFQQEGAREDSFLFSLGNYYVPVGVVSRTSAENKAWFRCQVGGCIKDGKTIPCPKGHKSNVNKHLKDSHQLRGGQG 164
            S G    +V +K+PAP++   G ++ VP+ T +++ SF     +Q+EGAREDSFL+SLGNY  PV      S +   +++CQVG C    KT PCPKG KSNVNKH ++ HQL G +G
Sbjct:   36 SAGVDSAAVRLKQPAPIYTKSGDDFVVPQVTIDSIESFKAKDEYQREGAREDSFLYSLGNYAAPV----EKSGKWIGYYKCQVGKCRTSTKTTPCPKGSKSNVNKHFREVHQLVGAKG 149          
BLAST of mRNA_P-littoralis_Contig192.104.1 vs. uniprot
Match: A0A6H5L4Z5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L4Z5_9PHAE)

HSP 1 Score: 85.5 bits (210), Expect = 5.230e-19
Identity = 50/57 (87.72%), Postives = 52/57 (91.23%), Query Frame = 0
Query:    1 MSDAGGGSAASAPDAGGSPGTSTLAPGSSTQDAQQDNEVVVVPGSTSGGAPQESVNV 57
            MSDA GGSAASAPDA GSPGTSTLAP SSTQDAQQDNEVVVVPGSTSGGAPQ+ + V
Sbjct:    1 MSDASGGSAASAPDADGSPGTSTLAPCSSTQDAQQDNEVVVVPGSTSGGAPQQFIIV 57          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig192.104.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
A0A6H5KQP3_9PHAE2.210e-5592.31Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KS21_9PHAE2.320e-5590.91Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more]
A0A6H5JJJ9_9PHAE3.610e-2446.61Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ec... [more]
A0A6H5L4Z5_9PHAE5.230e-1987.72Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..62
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 148..169
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 143..169
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 15..53

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig192contigP-littoralis_Contig192:431704..432210 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig192.104.1mRNA_P-littoralis_Contig192.104.1Pylaiella littoralis U1_48mRNAP-littoralis_Contig192 431704..432226 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig192.104.1 ID=prot_P-littoralis_Contig192.104.1|Name=mRNA_P-littoralis_Contig192.104.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=169bp
MSDAGGGSAASAPDAGGSPGTSTLAPGSSTQDAQQDNEVVVVPGSTSGGA
PQESVNVKRPAPVFHVGGGEYDVPEATKNAVASFVVPAGFQQEGAREDSF
LFSLGNYYVPVGVVSRTSAENKAWFRCQVGGCIKDGKTIPCPKGHKSNVN
KHLKDSHQLRGGQGKSREQ
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