prot_P-littoralis_Contig192.96.1 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig192.96.1
Unique Nameprot_P-littoralis_Contig192.96.1
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length44
Homology
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BLAST of mRNA_P-littoralis_Contig192.96.1 vs. uniprot
Match: A0A6H5KW14_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KW14_9PHAE)

HSP 1 Score: 60.5 bits (145), Expect = 1.670e-9
Identity = 22/30 (73.33%), Postives = 26/30 (86.67%), Query Frame = 0 
Query:    1 ILYYVAGWLLSRVWSHSRRHNIPDQEWEII 30
            +LYY+AGWLLS+ WS  RRHNIPDQEW+ I
Sbjct:  142 VLYYIAGWLLSKAWSRKRRHNIPDQEWDFI 171
[Close]
BLAST of mRNA_P-littoralis_Contig192.96.1 vs. uniprot
Match: D7FVM7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FVM7_ECTSI)

HSP 1 Score: 47.8 bits (112), Expect = 5.130e-5
Identity = 16/27 (59.26%), Postives = 23/27 (85.19%), Query Frame = 0 
Query:    1 ILYYVAGWLLSRVWSHSRRHNIPDQEW 27
            +LYY++GWLLS+VW+H RR  I ++EW
Sbjct:  203 VLYYISGWLLSKVWTHVRRQKIEEREW 229
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig192.96.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5KW14_9PHAE1.670e-973.33Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FVM7_ECTSI5.130e-559.26Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig192contigP-littoralis_Contig192:420059..420206 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig192.96.1mRNA_P-littoralis_Contig192.96.1Pylaiella littoralis U1_48mRNAP-littoralis_Contig192 420026..420206 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig192.96.1 ID=prot_P-littoralis_Contig192.96.1|Name=mRNA_P-littoralis_Contig192.96.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=44bp
ILYYVAGWLLSRVWSHSRRHNIPDQEWEIIPPPVRAPLREIQS*
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