mRNA_P-littoralis_Contig192.57.4 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig192.57.4 vs. uniprot
Match: D7FMM2_ECTSI (GE20757 n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FMM2_ECTSI) HSP 1 Score: 513 bits (1320), Expect = 5.650e-176 Identity = 265/328 (80.79%), Postives = 284/328 (86.59%), Query Frame = 1
Query: 250 AGRMLGF--AKNVRAAALLPFSTRAGLKMDGGAASGLLFSAAGVIGGANLIGFGITASTKTHKLTDLTGAGAFVLSATACAWKSGSFQSGAVRPLLLNVAVGVWGVRLASYLFARIIKTGEDQRLARYFPAKDEGWLDSARSFFPVNLAAFWTIQASWSCEQLLLLSLSLAMWAWVVSLPVTLANFSPARAVPMGVGGWACFGIAAAGLAVETVADYQAWGKFQFKNDPDNKGKFMGSGLWGLSRHPNYLGEMGVWWALLGVALPALRGPGKIALGLASPVFITYLIMQVSGVPILEQQHDEKYGDDPRYQEWKKNTPMIIPNLSKIF 1227
AGR+LGF A AAA PFSTR GLKM GG SGLLFSA GVIGGANLIGFG+TA+TKTHK+TDLTGAGAFVLSA ACAWKSGSF+SGA+RPLLLNVAVGVWGVRLASYLFARIIKTGEDQRLAR+FP KDEGWLDSARS FPVNLA FWTIQA MWAWVVSLPVTLANFSPARAVPMGVGGWAC G+AA GLAVETVADYQ KFQFKNDPDNKGKFM SGLW LSRHPNYLGEMGVWWA+LGVALPALRGPG++ALG ASP FIT LIM VSGVP+LEQQHDEKYG DPRY+EWK+NTPMI+P++SK++
Sbjct: 3 AGRVLGFGHALGGAAAAFRPFSTRTGLKMAGGG-SGLLFSA-GVIGGANLIGFGVTATTKTHKVTDLTGAGAFVLSAAACAWKSGSFRSGAIRPLLLNVAVGVWGVRLASYLFARIIKTGEDQRLARFFPGKDEGWLDSARSLFPVNLAGFWTIQA---------------MWAWVVSLPVTLANFSPARAVPMGVGGWACLGLAATGLAVETVADYQ---KFQFKNDPDNKGKFMTSGLWSLSRHPNYLGEMGVWWAILGVALPALRGPGRVALGFASPAFITALIMYVSGVPMLEQQHDEKYGGDPRYREWKENTPMILPDMSKVW 310
BLAST of mRNA_P-littoralis_Contig192.57.4 vs. uniprot
Match: A0A835Z1P4_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z1P4_9STRA) HSP 1 Score: 271 bits (693), Expect = 4.430e-82 Identity = 141/289 (48.79%), Postives = 195/289 (67.47%), Query Frame = 1
Query: 346 SGLLFSAAGVIGGANLIGFGITASTKTHKLTDLTGAGAFVLSATACAWKSGSFQSGAVRPLLLNVAVGVWGVRLASYLFARIIKTGEDQRLARYFPAKDEGWLDSARSFFPVNLAAFWTIQASWSCEQLLLLSLSLAMWAWVVSLPVTLANFSPARAVP-MGVGGWACFGIAAAGLAVETVADYQAWGKFQFKNDPDNKGKFMGSGLWGLSRHPNYLGEMGVWWALLGVALPALRGPGKIALGLASPVFITYLIMQVSGVPILEQQHDEKYGDDPRYQEWKKNTPMIIP 1209
+GLLFSAA +IGG NL+GF ITA+TKTHKLTDL G GAFV SA A A+ +G RP +L+ AV +WG+RLA +LF RI+ + +D RL ++ P K E WLDS+ S FP+NLA FW IQA+ WAWVVSLPVT+ANF+P + +G+GG A G A E +AD W K FK +P NKGK++ G+W +SRHPNY GE+ +W +L ++PALRGP ++ +G SP+FI+ LI+ VSG+P+LE + ++ +G D +Y ++K+ TP+++P
Sbjct: 24 NGLLFSAA-IIGGINLLGFSITAATKTHKLTDLFGTGAFVASAAASAYVNGVHAHPWSRPFILSAAVSIWGIRLAGHLFERILTSPKDPRLEKFMPKKGEKWLDSSGSNFPLNLAGFWMIQAA---------------WAWVVSLPVTMANFNPVASTQRLGMGGRVALLTFAGGFAFEAIAD---WQKRSFKKNPANKGKWIDQGVWSVSRHPNYFGELLIWSSLFFASVPALRGPRQVLIGAVSPLFISGLILYVSGIPLLEDKMNKDHGQDEKYLKYKETTPLLVP 293
BLAST of mRNA_P-littoralis_Contig192.57.4 vs. uniprot
Match: A0A6S9K4Z3_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6S9K4Z3_HETAK) HSP 1 Score: 258 bits (660), Expect = 5.660e-77 Identity = 145/309 (46.93%), Postives = 188/309 (60.84%), Query Frame = 1
Query: 322 LKMDGGAASGLLFSAAGVIGGANLIGFGITASTKTHKLTDLTGAGAFVLSATACAWKS---GSFQSGAVRPLLLNVAVGVWGVRLASYLFARIIKTGEDQRLARYFPAKDEGWLDSARSFFPVNLAAFWTIQASWSCEQLLLLSLSLAMWAWVVSLPVTLANFSPAR----------AVPMGVGGWACFGIAAAGLAVETVADYQAWGKFQFKNDPDNKGKFMGSGLWGLSRHPNYLGEMGVWWALLGVALPALRGPGKIALGLASPVFITYLIMQVSGVPILEQQHDEKYGDDPRYQEWKKNTPMIIP 1209
LK+ A GLLFS GVIGG NL GF +TA+ +THKLTDL GAG+FV SA CA ++ G + +R LL AV WG RLA YLF R++ G D RL ++P + EGW + +SF+PV L+ FW IQA+ W W+VS PVTLA F+ A A +G GG GL +E VAD Q W FK +NKGK++ +G+W SRHPNY GE VWW LLG+A P LRGPG++ALGLASP+F T L+ QVSG+P+LE+++D +Y + YQ +K T ++IP
Sbjct: 6 LKLQPHAHGGLLFSG-GVIGGLNLAGFAVTAALETHKLTDLVGAGSFVASAVLCARRAAGPGGVGALPLRAALLAGAVAAWGTRLAGYLFRRVLYVGGDDRLDSFYPEEGEGWFNWEKSFYPVKLSGFWVIQAA---------------WGWLVSAPVTLAIFNAASPNAGAAQAAAARRLGWGGALSLAAFVGGLLLEWVADQQKW---VFKKKEENKGKWIETGVWRYSRHPNYFGETAVWWGLLGLAAPLLRGPGQLALGLASPLFTTLLLTQVSGIPMLEKKYDARYANSAEYQAYKARTNVLIP 295
BLAST of mRNA_P-littoralis_Contig192.57.4 vs. uniprot
Match: A0A0G4EDP8_VITBC (S5A_REDUCTASE domain-containing protein n=1 Tax=Vitrella brassicaformis (strain CCMP3155) TaxID=1169540 RepID=A0A0G4EDP8_VITBC) HSP 1 Score: 208 bits (530), Expect = 1.370e-57 Identity = 128/294 (43.54%), Postives = 166/294 (56.46%), Query Frame = 1
Query: 382 GANLIGFGITASTKTHKLTDLTGAGAFVLSATACAWKSGSFQSGAVRPLLLNVAVGVWGVRLASYLFARIIKTGEDQRLARYFPAKDEGWLDSARSFFPVNLAAFWTIQASWSCEQLLLLSLSLAMWAWVVSLPVTLANFSPARAVPMGVGGWACFGIA--AAGLAVETVADYQAWGKFQ-------FKNDPDNKGKFMGSGLWGLSRHPNYLGEMGVWWALLGVALPALR---GPGKIALGLASPVFITYLIMQVSGVPILEQQHDEKYGDDPRYQEWKKNTPMIIPNLSKIF 1227
G N +GF I+A T T K+TDL G G FVL+A +G A RP L AV +WG RLAS+LF RI+KTGED RL F + LAAFWT Q +W W+ LP T+A +S A + W FGIA + G A ET+AD Q W K Q K D K+M GLW L R+PNY GE+ VW L VA+PAL GP +ALG SP F++ L++ VSGVP+ E++ D+++GDDP+YQE+KK+TP+IIP+L+K+F
Sbjct: 98 GVNGLGFAISAITGTQKITDLFGTGCFVLTALNSFRSAGVPIDIASRPAFLTAAVSLWGTRLASFLFNRILKTGEDTRLTDQFQSTG-------------GLAAFWTAQT---------------VWCWLSLLPSTVAVYSKAAT---SLTRWDAFGIALFSLGFAFETIADNQKWAKKQREMKGEAAKGKGDKAAKWMDEGLWRLCRYPNYFGEICVWSGLYAVAVPALYQAYGPKMVALGALSPAFVSSLLLFVSGVPLAEKRADKRFGDDPQYQEYKKSTPLIIPDLTKVF 360
BLAST of mRNA_P-littoralis_Contig192.57.4 vs. uniprot
Match: A0A7S3GPN7_9STRA (Hypothetical protein n=2 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3GPN7_9STRA) HSP 1 Score: 202 bits (513), Expect = 1.160e-55 Identity = 122/317 (38.49%), Postives = 181/317 (57.10%), Query Frame = 1
Query: 373 VIGGANLIGFGITASTKTHKLTDLTGAGAFVLSATACAWKSG--SFQSGAV---RPLLLNVAVGVWGVRLASYLFARIIKTGEDQRLARYFPAKDEGWLDSARSFFPVNLAAFWTIQASWSCEQLLLLSLSLAMWAWVVSLPVTLANFSPARAVPMGVGG-------WACFGIAAA------------GLAVETVADYQAWGKFQFKNDPDNKGKFMGSGLWGLSRHPNYLGEMGVWWALLGVALPALRGPGKIALGLA-------------SPVFITYLIMQVSGVPILEQQHDEKYGDDPRYQEWKKNTPMIIPN 1212
++GG N +G+G+TA+ +THKLTDL GAG+FV + A ++K+G + +SG V + LL+NV V +WG RLAS+LF+R++K GED+RL ++F E +LD SFFPV LA FWTIQA+ W ++ LPVTL N P + + GG + G A G+ +E +AD W K F+ + N G + GLW +S++PNY GE+ WW++ LPAL A G A SPVFIT+L+ ++SG+P+LE++H +Y + +Y+E+ + TP++IPN
Sbjct: 14 IVGGCNAVGYGLTAAFETHKLTDLVGAGSFVAATLAMSYKNGLLNLKSGGVMHPKLLLVNVGVILWGSRLASFLFSRVLKVGEDKRLQKFFRKPGEAYLDIKASFFPVRLATFWTIQAA---------------WGFICLLPVTLYNSVP---LMLSNGGPNPQFLLKSAHGPVATLLTVLPVAGIFLGVGIEALAD---WQKNTFRENKKNDGHWCDVGLWRMSKYPNYFGELLTWWSVYFSCLPALLPAAAGASGAAGTMFTAAPAVALLSPVFITFLLFKLSGIPLLEKKHSAEYKGNKQYEEYVRITPLLIPN 309
BLAST of mRNA_P-littoralis_Contig192.57.4 vs. uniprot
Match: A0A7S3YEU5_9EUKA (Hypothetical protein n=2 Tax=Lotharella globosa TaxID=91324 RepID=A0A7S3YEU5_9EUKA) HSP 1 Score: 199 bits (505), Expect = 6.270e-55 Identity = 127/299 (42.47%), Postives = 171/299 (57.19%), Query Frame = 1
Query: 376 IGGANLIGFGITASTKTHKLTDLTGAGAFVLSATAC----AWKSGSFQSGAVRPLLLNVAVGVWGVRLASYLFARIIKTGEDQRLARYFPAKDEGWLDSARSFFPVNLAAFWTIQASWSCEQLLLLSLSLAMWAWVVSLPVTLANFSPA------RAVPMGVGGWACFGIA----AAGLAVETVADYQAWGKFQFKNDPDN--KGKFMGSGLWGLSRHPNYLGEMGVWWALLGVALPALRGPGKIALGLASPVFITYLIMQVSGVPILEQQHDEKYGDDPRYQEWKKNTPMIIPNLSKI 1224
+GG NL GF TA T THKLTD+TG AF +SA A A K G S + RP++L+V V W RL YLF RI K+ ED RL F + E L + S FP+ L FW+IQA +WAW LPVT+A + R P + A GI + G VET+AD Q K QFKND N + K+ GLW +SR+PNYLGEM VWW+L +A P A +ASPVF+T+L+ +VSG+P++E+++D KYG++ Y+++K TPM++P+L+ I
Sbjct: 5 VGGWNLAGFTATALTGTHKLTDITGTSAFAVSALASLGLLASKRGLKASLSPRPIMLSVCVTAWAARLGGYLFDRIRKSHEDPRLKYMFRKEGEPML-TGPSAFPLKLLNFWSIQA---------------LWAWTSMLPVTMAIAAAGDPKKVMRTAPRSISSLA-LGIGFVGFSTGFLVETLADSQ---KSQFKNDVTNPRRDKWCDQGLWSISRYPNYLGEMTVWWSLFVMANPLAP-----AWTVASPVFVTFLLTRVSGIPLIEKRYDSKYGNEEEYKQYKAKTPMLVPHLASI 278
BLAST of mRNA_P-littoralis_Contig192.57.4 vs. uniprot
Match: A0A0G4GWI8_9ALVE (Uncharacterized protein n=1 Tax=Chromera velia CCMP2878 TaxID=1169474 RepID=A0A0G4GWI8_9ALVE) HSP 1 Score: 197 bits (501), Expect = 1.630e-53 Identity = 126/329 (38.30%), Postives = 181/329 (55.02%), Query Frame = 1
Query: 295 LLPFSTRAGLKMDGGAASGLLFSA-------AGVIG-GANLIGFGITASTKTHKLTDLTGAGAFVLSATACAWKSGSFQSGAVRPLLLNVAVGVWGVRLASYLFARIIKTGEDQRLARYFPAKDEGWLDSARSFFPVNLAAFWTIQASWSCEQLLLLSLSLAMWAWVVSLPVTL----ANFSPARAVPMGVGGWACFG--IAAAGLAVETVADYQAWGKFQFKNDPDNKGKFMGSGLWGLSRHPNYLGEMGVWWALLGVALPAL-RGPG---KIALGLASPVFITYLIMQVSGVPILEQQHDEKYGDDPRYQEWKKNTPMIIPNLSKIF 1227
++P ++R L++ G A+GL SA +G++ GAN IG+ IT T THK+TDL G G+FV +A A W++G + R LL+ A+ WG RLAS+LFAR++K G+D RL F P + FWTIQA+ WAW+ +P TL A A + M +G I G+ E+VAD+Q W K +F DP KG F +GLW L R PNY GE+ WW +ALP L GP ALG+ SP++I +L++ VSG+P+ E+ +++KYG Y+++KK+TP++IP +S F
Sbjct: 55 VVPKTSRTALRLSAGGAAGLKMSALTQGLIQSGLVALGANSIGYLITRLTDTHKITDLVGTGSFVATALATQWRTGVYTP---RALLMTGAISFWGTRLASFLFARVLKQGDDARLGAVFKK-------------PGGMEGFWTIQAA---------------WAWICMVPHTLLLYGAKSMAAGSAAMALGPLDAIAATIMIGGIVFESVADWQKW-KHRF--DPSKKGTFCKTGLWSLCRQPNYFGELCTWWGGYFLALPGLLAGPWGWKAAALGVVSPLWIQFLLLFVSGIPLSEKGNEKKYGQMEEYKQYKKDTPLLIPKISNAF 349
BLAST of mRNA_P-littoralis_Contig192.57.4 vs. uniprot
Match: A0A7S2X9E1_9EUKA (Hypothetical protein n=1 Tax=Lotharella oceanica TaxID=641309 RepID=A0A7S2X9E1_9EUKA) HSP 1 Score: 188 bits (477), Expect = 8.870e-51 Identity = 120/299 (40.13%), Postives = 169/299 (56.52%), Query Frame = 1
Query: 376 IGGANLIGFGITASTKTHKLTDLTGAGAFVLSATAC----AWKSGSFQSGAVRPLLLNVAVGVWGVRLASYLFARIIKTGEDQRLARYFPAKDEGWLDSARSFFPVNLAAFWTIQASWSCEQLLLLSLSLAMWAWVVSLPVTLANFSPA------RAVPMGVG----GWACFGIAAAGLAVETVADYQAWGKFQFKNDPDN--KGKFMGSGLWGLSRHPNYLGEMGVWWALLGVALPALRGPGKIALGLASPVFITYLIMQVSGVPILEQQHDEKYGDDPRYQEWKKNTPMIIPNLSKI 1224
+GG NL GF TA T +HKLTD+TG AF +SA A A K G + + RPL+L+V V W RL YLF RI + ED RL +Y KD + + S FP+ L FW+IQA +WAW LPVT+A + RA P + G G + G VET+AD Q K QFK+D N + K+ GLW +S++PNYLGEM VWW+L +A P +ASPVF+T+L+ +VSG+P++E+++D KYG+D ++++K TPM++P+ + +
Sbjct: 19 VGGWNLAGFTATALTGSHKLTDITGTSAFTVSALASLGLLASKRGVKAAISPRPLMLSVCVTAWAARLGGYLFDRIRNSHEDPRL-KYMFRKDGEPMLTGPSRFPLKLLNFWSIQA---------------LWAWTSMLPVTMAIAAAGDPKKVIRAAPKSISSVTLGLGLIGFST-GFLVETLADRQ---KSQFKSDVANPRRDKWCDQGLWSISQYPNYLGEMTVWWSLFLMAQPVAP-----VWTVASPVFVTFLLTRVSGIPLMEKRYDRKYGNDEEFKQYKATTPMLLPSFASV 292
BLAST of mRNA_P-littoralis_Contig192.57.4 vs. uniprot
Match: I0YVW6_COCSC (DUF1295-domain-containing protein n=1 Tax=Coccomyxa subellipsoidea (strain C-169) TaxID=574566 RepID=I0YVW6_COCSC) HSP 1 Score: 184 bits (467), Expect = 1.570e-49 Identity = 118/287 (41.11%), Postives = 164/287 (57.14%), Query Frame = 1
Query: 373 VIGGANLIGFGITASTKTHKLTDLTGAGAFVLSA-----TACAWKS-GSFQSGAVRPLLLNVAVGVWGVRLASYLFARIIKTGEDQRLARYFPAKDEGWLDSARSFFPVNLAAFWTIQASWSCEQLLLLSLSLAMWAWVVSLPVTLANFSPARAVPMGVGGWACFGIAAAGLAVETVADYQAWGKFQFKN-DPDNKGKFMGSGLWGLSRHPNYLGEMGVWWALLGVALPALRGP-GKIALGLASPVFITYLIMQVSGVPILEQQHDEKYGDDPRYQEWKKNTPMIIP 1209
VI G N GF +TA T++HK+TDLTG AF+ SA AC + FQ + L L AV +WG RLA YLF R+++TG+D RL FP + L + RS +P+ LA FWT Q+ +W W+V LP+T++ + A P+G GW AG A+ETVAD Q KF FK+ PD KFM SGL+ L RHPNY GE+ +W +L L G K +ASP F +L++ VSG+P LE+ H+++YG D Y+++K +T +++P
Sbjct: 16 VIVGFNTAGFAVTAVTRSHKITDLTGTTAFIASAWATHAAACHMHNLRLFQPS--KSLFLAGAVTLWGTRLAGYLFWRVLQTGKDARLNFLFPRDESEPLLTGRSMYPIKLAGFWTAQS---------------LWGWIVLLPITVSQ-TLTPAAPLGPLGWIAAAGFLAGFAIETVADLQ---KFYFKSAHPD---KFMDSGLFALCRHPNYFGEILLWTSL--TVLAGTHGVFAKHPWIIASPAFTIFLLLYVSGIPTLEKSHEKRYGKDAAYKDYKASTNLLLP 276
BLAST of mRNA_P-littoralis_Contig192.57.4 vs. uniprot
Match: A0A8J9S1B4_9CHLO (Uncharacterized protein n=1 Tax=Coccomyxa sp. Obi TaxID=2315456 RepID=A0A8J9S1B4_9CHLO) HSP 1 Score: 184 bits (467), Expect = 2.540e-49 Identity = 122/287 (42.51%), Postives = 161/287 (56.10%), Query Frame = 1
Query: 373 VIGGANLIGFGITASTKTHKLTDLTGAGAFVLSATAC------AWKSGSFQSGAVRPLLLNVAVGVWGVRLASYLFARIIKTGEDQRLARYFPAKDEGWLDSARSFFPVNLAAFWTIQASWSCEQLLLLSLSLAMWAWVVSLPVTLANFSPARAVPMGVGGWACFGIAAAGLAVETVADYQAWGKFQFKN-DPDNKGKFMGSGLWGLSRHPNYLGEMGVWWALLGVALPALRGP-GKIALGLASPVFITYLIMQVSGVPILEQQHDEKYGDDPRYQEWKKNTPMIIP 1209
VI G N GF ITA T++HK+TDLTG AFV SA A A FQ + L L AV +WG RLA YLF R+++TG+D RL FP ++ L + RS +P+ LA FWT Q+ +W W+V LPVT+ + A AV +G GW G A ET+AD Q KFQFK +PD KFM SGL+ L RHPNY GE+ +W +L L G K LASP F +L++ VSG+P LE H+++YG D Y+ +K +T +++P
Sbjct: 37 VIAGFNTAGFAITAVTRSHKITDLTGTTAFVASAWATHAATCEAHNLRLFQPS--KSLFLAGAVTLWGARLAGYLFYRVLQTGKDARLNFLFPKDEKEPLLTGRSMYPIKLAGFWTAQS---------------LWGWIVLLPVTVGQ-TLAPAVALGPVGWLAAAGFITGFAFETIADLQ---KFQFKTANPD---KFMDSGLFALCRHPNYFGEILLWSSL--TVLAGTHGVLAKHPWILASPAFTIFLLVYVSGIPPLEISHEKRYGKDAAYKRYKASTNLLLP 297 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig192.57.4 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig192.57.4 >prot_P-littoralis_Contig192.57.4 ID=prot_P-littoralis_Contig192.57.4|Name=mRNA_P-littoralis_Contig192.57.4|organism=Pylaiella littoralis U1_48|type=polypeptide|length=329bp MAGRMLGFAKNVRAAALLPFSTRAGLKMDGGAASGLLFSAAGVIGGANLIback to top mRNA from alignment at P-littoralis_Contig192:305120..319405- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig192.57.4 ID=mRNA_P-littoralis_Contig192.57.4|Name=mRNA_P-littoralis_Contig192.57.4|organism=Pylaiella littoralis U1_48|type=mRNA|length=14286bp|location=Sequence derived from alignment at P-littoralis_Contig192:305120..319405- (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig192:305120..319405- >mRNA_P-littoralis_Contig192.57.4 ID=mRNA_P-littoralis_Contig192.57.4|Name=mRNA_P-littoralis_Contig192.57.4|organism=Pylaiella littoralis U1_48|type=CDS|length=987bp|location=Sequence derived from alignment at P-littoralis_Contig192:305120..319405- (Pylaiella littoralis U1_48)back to top |