prot_P-littoralis_Contig192.54.1 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig192.54.1
Unique Nameprot_P-littoralis_Contig192.54.1
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length158
Homology
BLAST of mRNA_P-littoralis_Contig192.54.1 vs. uniprot
Match: D7FMM1_ECTSI (Topo-VIb_trans domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FMM1_ECTSI)

HSP 1 Score: 160 bits (406), Expect = 2.980e-43
Identity = 97/129 (75.19%), Postives = 105/129 (81.40%), Query Frame = 0
Query:   27 LVQTVKELVDNAIDACRCRSSEQDAPTVRVVLRRRP-NRKDAEGESRVGESQELEEEQPLELQVADNGAGLPDVTKALVLFSSTKSGHGSLTPGDVSAP-SAGTNAGKYGLGLTLSLLYSQQHFGGFLK 153
            ++QTVKELVDNAID+CRCR+SEQDAPTVRVVLRR       AEG   VGE  +LEEE PLELQVADNGAGL DVTKAL LFSSTKSGH      DVS+  +AG NAGKYGLGLTLSLLYSQ+HFGGFLK
Sbjct:    5 ILQTVKELVDNAIDSCRCRTSEQDAPTVRVVLRRAAAGAAVAEG---VGEDLDLEEE-PLELQVADNGAGLTDVTKALGLFSSTKSGHTPPVAPDVSSSGAAGKNAGKYGLGLTLSLLYSQKHFGGFLK 129          
BLAST of mRNA_P-littoralis_Contig192.54.1 vs. uniprot
Match: A0A6H5JUR8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JUR8_9PHAE)

HSP 1 Score: 106 bits (264), Expect = 1.200e-26
Identity = 65/86 (75.58%), Postives = 70/86 (81.40%), Query Frame = 0
Query:   29 QTVKELVDNAIDACRCRSSEQDAPTVRVVLRRRP-NRKDAEGESRVGESQELEEEQPLELQVADNGAGLPDVTKALVLFSSTKSGH 113
            QTVKELVDNAID+CRCR+SEQDAPTVRVVLRR       AEG   V E  +L+EE PLELQVADNGAGL DVTKA+ LFSSTKSGH
Sbjct:   27 QTVKELVDNAIDSCRCRASEQDAPTVRVVLRRSAAGATVAEG---VVEDLDLDEE-PLELQVADNGAGLTDVTKAVGLFSSTKSGH 108          
BLAST of mRNA_P-littoralis_Contig192.54.1 vs. uniprot
Match: W2RBB1_PHYPN (Uncharacterized protein n=8 Tax=Phytophthora TaxID=4783 RepID=W2RBB1_PHYPN)

HSP 1 Score: 59.7 bits (143), Expect = 1.760e-7
Identity = 48/142 (33.80%), Postives = 70/142 (49.30%), Query Frame = 0
Query:    9 QHFKANFELSGFGSPGQALVQTVKELVDNAIDACRCRSSE---QDAPTVRVVLRRRPNRKDAEGESRVGESQELEEEQPLELQVADNGAGLPDVTKALVLFSSTKSGHGSLTPGDVSAPSAGTNAGKYGLGLTLSLLYSQQH 147
            Q  ++N EL GF S   ALVQ VKEL +NA+DA +  SS+    DAP   + +  + N                EE   +++  AD G+G+      L+  S+ ++   S   G       G N+GKYG+GL  ++LYSQ H
Sbjct:   13 QFIRSNLELLGFESRRDALVQAVKELFENALDATQALSSDVSWDDAPLELLRVNVKLN----------------EETGSIDIVCADTGSGIHAHQVKLLCCSAFETTKTSAQGG------GGCNSGKYGIGLKAAMLYSQMH 132          
BLAST of mRNA_P-littoralis_Contig192.54.1 vs. uniprot
Match: A0A0W8DZ01_PHYNI (Type 2 DNA topoisomerase 6 subunit B n=7 Tax=Phytophthora TaxID=4783 RepID=A0A0W8DZ01_PHYNI)

HSP 1 Score: 59.7 bits (143), Expect = 1.860e-7
Identity = 48/142 (33.80%), Postives = 70/142 (49.30%), Query Frame = 0
Query:    9 QHFKANFELSGFGSPGQALVQTVKELVDNAIDACRCRSSE---QDAPTVRVVLRRRPNRKDAEGESRVGESQELEEEQPLELQVADNGAGLPDVTKALVLFSSTKSGHGSLTPGDVSAPSAGTNAGKYGLGLTLSLLYSQQH 147
            Q  ++N EL GF S   ALVQ VKEL +NA+DA +  SS+    DAP   + +  + N                EE   +++  AD G+G+      L+  S+ ++   S   G       G N+GKYG+GL  ++LYSQ H
Sbjct:   13 QFIRSNLELLGFESRRDALVQAVKELFENALDATQALSSDVTWDDAPLELLRVNVKLN----------------EETGSIDIVCADTGSGIHAHQVKLLCCSAFETTKTSAQGG------GGCNSGKYGIGLKAAMLYSQMH 132          
BLAST of mRNA_P-littoralis_Contig192.54.1 vs. uniprot
Match: A0A0P1ADA9_PLAHL (Dna topoisomerase vi subunit b n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1ADA9_PLAHL)

HSP 1 Score: 57.4 bits (137), Expect = 1.110e-6
Identity = 49/146 (33.56%), Postives = 71/146 (48.63%), Query Frame = 0
Query:    8 VQHFKANFELSGFGSPGQALVQTVKELVDNAIDACRCRSSE---QDAPTVRVVLRRRPNRKDAEGESRVGESQELEEEQPLELQVADNGAGLPDVTKALVL---FSSTKSGHGSLTPGDVSAPSAGTNAGKYGLGLTLSLLYSQQH 147
            VQ  ++N EL GFG+   ALVQ VKEL +NA+DA +  SSE     AP   + +  + N       +  G          +++  AD G+G+      L+    F +TK+G G            G  +GKYG+GL  ++LYSQ H
Sbjct:   12 VQFIRSNLELLGFGNRRDALVQAVKELFENALDATQALSSEILWDHAPLEFLRISVKLN-------ATTGN---------IDIVCADTGSGIHAHQVKLLCCNAFETTKNGKG------------GGTSGKYGVGLKAAMLYSQMH 129          
BLAST of mRNA_P-littoralis_Contig192.54.1 vs. uniprot
Match: A0A1Z5JMG3_FISSO (HATPase_c domain-containing protein n=1 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5JMG3_FISSO)

HSP 1 Score: 57.0 bits (136), Expect = 1.610e-6
Identity = 44/131 (33.59%), Postives = 62/131 (47.33%), Query Frame = 0
Query:   24 GQALVQTVKELVDNAIDACRCRSSEQDAPTVRVVLRRRPNRKDAEGESRVGESQELEEEQPLELQVADNGAGLPDVTKALVLFSSTKSGHGSLTPGDVSAPSAGTNAGKYGLGLTLSLLYSQQHFGGFLKV 154
            G A  Q +KELVDNA+DAC     E  +P  RV +  +P ++D               E  L + V DNG G+ D+   +  F ++K    S T            AG+YG+GLTL LL++Q+   G   V
Sbjct:   45 GDAFAQIIKELVDNAVDACLSSKKEDSSPK-RVRVDIQPTKED---------------EHLLRVTVTDNGCGMHDIQACVDPFRTSKQDTESNT------------AGRYGIGLTLCLLHAQRLVRGSCAV 147          
BLAST of mRNA_P-littoralis_Contig192.54.1 vs. uniprot
Match: D9PZY9_ACIS3 (Type 2 DNA topoisomerase 6 subunit B n=1 Tax=Acidilobus saccharovorans (strain DSM 16705 / JCM 18335 / VKM B-2471 / 345-15) TaxID=666510 RepID=D9PZY9_ACIS3)

HSP 1 Score: 56.6 bits (135), Expect = 2.120e-6
Identity = 53/150 (35.33%), Postives = 70/150 (46.67%), Query Frame = 0
Query:    6 SVVQHFKANFELSGFGSPGQALVQTVKELVDNAIDACRCRSSEQDAPTVRVVLRRRPNRKDAEGESRVGESQELEEEQPL--ELQVADNGAGLPDVTKAL----VLFSSTKSGHGSLTPGDVSAPSAGTNAGKYGLGLTLSLLYSQQHFG 149
            SV + F  N EL+GF +P +AL QTV+ELV+NA+DA     S    P V++ +      K+ E E+         EE+P   E+ V DNG G+P    A     VLFSS                      G YGLG+   +LYSQ   G
Sbjct:   18 SVAEFFSKNKELAGFSNPTRALYQTVRELVENALDAT---DSHGILPEVKIYI------KEVEPEN---------EERPARYEVSVEDNGIGVPKTVMAQAFGKVLFSSKYV--------------IRQTRGMYGLGVKAVVLYSQTTTG 135          
BLAST of mRNA_P-littoralis_Contig192.54.1 vs. uniprot
Match: A0A833WNN5_PHYIN (Histidine kinase-/DNA gyrase B-/HSP90-like ATPase n=1 Tax=Phytophthora infestans TaxID=4787 RepID=A0A833WNN5_PHYIN)

HSP 1 Score: 55.5 bits (132), Expect = 5.130e-6
Identity = 46/142 (32.39%), Postives = 69/142 (48.59%), Query Frame = 0
Query:    9 QHFKANFELSGFGSPGQALVQTVKELVDNAIDACRCRSSEQ---DAPTVRVVLRRRPNRKDAEGESRVGESQELEEEQPLELQVADNGAGLPDVTKALVLFSSTKSGHGSLTPGDVSAPSAGTNAGKYGLGLTLSLLYSQQH 147
            Q  ++N EL GFG+   ALVQ VKEL +NA+DA +  SSE    DAP   + +  + N                E+   +++  AD G+G+      L+  S+ ++    L  G          +GKYG+GL  ++LYSQ H
Sbjct:   11 QFIRSNLELLGFGTCRDALVQAVKELFENALDATQALSSEDSWDDAPLELLRVNVKLN----------------EDTGSIDIVCADTGSGIHAHQVKLLCCSAFETTKTRLNGGGA------CTSGKYGVGLKAAMLYSQIH 130          
BLAST of mRNA_P-littoralis_Contig192.54.1 vs. uniprot
Match: A0A1Z5KBQ7_FISSO (HATPase_c domain-containing protein n=1 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5KBQ7_FISSO)

HSP 1 Score: 54.7 bits (130), Expect = 1.020e-5
Identity = 43/131 (32.82%), Postives = 62/131 (47.33%), Query Frame = 0
Query:   24 GQALVQTVKELVDNAIDACRCRSSEQDAPTVRVVLRRRPNRKDAEGESRVGESQELEEEQPLELQVADNGAGLPDVTKALVLFSSTKSGHGSLTPGDVSAPSAGTNAGKYGLGLTLSLLYSQQHFGGFLKV 154
            G A  Q +KELVDNA+DAC     E  +P  RV +  +P ++D               +  L + V DNG G+ D+   +  F ++K    S T            AG+YG+GLTL LL++Q+   G   V
Sbjct:   46 GDAFAQIIKELVDNAVDACLSSDHEDTSPK-RVRVDIQPTKED---------------DHLLRVTVTDNGCGMLDIQACVDPFRTSKQDTESNT------------AGRYGIGLTLCLLHAQRLVRGSCAV 148          
BLAST of mRNA_P-littoralis_Contig192.54.1 vs. uniprot
Match: A0A524FWL9_THOAR (Type 2 DNA topoisomerase 6 subunit B n=1 Tax=Thorarchaeota archaeon (strain OWC) TaxID=2053491 RepID=A0A524FWL9_THOAR)

HSP 1 Score: 54.3 bits (129), Expect = 1.310e-5
Identity = 46/143 (32.17%), Postives = 71/143 (49.65%), Query Frame = 0
Query:    6 SVVQHFKANFELSGFGSPGQALVQTVKELVDNAIDACRCRSSEQDAPTVRVVLRRRPNRKDAEGESRVGESQELEEEQPLELQVADNGAGLPDVTKALVL---FSSTKSGHGSLTPGDVSAPSAGTNAGKYGLGLTLSLLYSQ 145
            S+   F  N  ++GF +P ++L  +V+EL++N++DAC      Q  P V V+L+R    K+  G   + +  E+      EL V DNG G+P  T  L+L    + TK  H               + G +GLG +L+LLY Q
Sbjct:   16 SISAWFYRNRAIAGFDNPARSLYVSVRELMENSLDACE---EAQILPEVTVLLKRE---KETLGTDVLSQGPEI-----FELVVKDNGTGIPRETIPLLLGKMLTGTKFTHKQ-------------SRGTFGLGGSLALLYGQ 134          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig192.54.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 19
Match NameE-valueIdentityDescription
D7FMM1_ECTSI2.980e-4375.19Topo-VIb_trans domain-containing protein n=2 Tax=E... [more]
A0A6H5JUR8_9PHAE1.200e-2675.58Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
W2RBB1_PHYPN1.760e-733.80Uncharacterized protein n=8 Tax=Phytophthora TaxID... [more]
A0A0W8DZ01_PHYNI1.860e-733.80Type 2 DNA topoisomerase 6 subunit B n=7 Tax=Phyto... [more]
A0A0P1ADA9_PLAHL1.110e-633.56Dna topoisomerase vi subunit b n=1 Tax=Plasmopara ... [more]
A0A1Z5JMG3_FISSO1.610e-633.59HATPase_c domain-containing protein n=1 Tax=Fistul... [more]
D9PZY9_ACIS32.120e-635.33Type 2 DNA topoisomerase 6 subunit B n=1 Tax=Acidi... [more]
A0A833WNN5_PHYIN5.130e-632.39Histidine kinase-/DNA gyrase B-/HSP90-like ATPase ... [more]
A0A1Z5KBQ7_FISSO1.020e-532.82HATPase_c domain-containing protein n=1 Tax=Fistul... [more]
A0A524FWL9_THOAR1.310e-532.17Type 2 DNA topoisomerase 6 subunit B n=1 Tax=Thora... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR036890Histidine kinase/HSP90-like ATPase superfamilyGENE3D3.30.565.10coord: 2..156
e-value: 1.3E-20
score: 75.9
IPR036890Histidine kinase/HSP90-like ATPase superfamilySUPERFAMILY55874ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinasecoord: 12..150
IPR003594Histidine kinase/HSP90-like ATPasePFAMPF02518HATPase_ccoord: 26..153
e-value: 2.3E-8
score: 34.5
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 57..79
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 57..85

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig192contigP-littoralis_Contig192:288287..295836 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig192.54.1mRNA_P-littoralis_Contig192.54.1Pylaiella littoralis U1_48mRNAP-littoralis_Contig192 288287..295836 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig192.54.1 ID=prot_P-littoralis_Contig192.54.1|Name=mRNA_P-littoralis_Contig192.54.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=158bp
SAGNSSVVQHFKANFELSGFGSPGQALVQTVKELVDNAIDACRCRSSEQD
APTVRVVLRRRPNRKDAEGESRVGESQELEEEQPLELQVADNGAGLPDVT
KALVLFSSTKSGHGSLTPGDVSAPSAGTNAGKYGLGLTLSLLYSQQHFGG
FLKVRVW*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036890HATPase_C_sf
IPR003594HATPase_C