mRNA_P-littoralis_Contig192.52.6 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig192.52.6 vs. uniprot
Match: D7FMM0_ECTSI (DNA repair protein RadA n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FMM0_ECTSI) HSP 1 Score: 958 bits (2476), Expect = 0.000e+0 Identity = 536/714 (75.07%), Postives = 572/714 (80.11%), Query Frame = 3
Query: 555 PTSCFLAPL--CPLSRDGVRG-----EQRRRSRNKQPL-AMRGSDDEGGRRRRSSKWDEGDGSESGSEGATRKAGAPMPRMVSWGLNSRSQPNARKALGSSSKTHTIVHVCEVCGSEHVQWVGRCPTCKEWNCVKPFKVRREQGSNPSRVSRAGVSAASVGVRPGG----GGDLEFSGLAGGAFGSSGGAGWLPEDGFAVPMRLSEVGEAEKQERMPLPGSELPRVLGGGLVPGSMVMLGGDPGVGKSTLLLQLAGQLASSQAGCVTGTFEEKEDDDRHQGEGRVEEGG-DAGAKADAEAFRAGTVVYISGEENNSQVAARAKRMGISGVDLFLYCETDIDVIIDQASVLSMQPQPALVMVDSIQTMRTQDSTSSPGSVTQVKECASRLVRLAKGSGITVFIVGHVTKSGSIAGPKVVEHMVDTVLYLEGDRFNSYRLLRSVKNRFGPSNEIGVFQMESGGLDDVADPSMLFLSDKHVDGDEGDESMDGSAVCVYMEGSRPILCELQSLVTYSRLPSPRRTSDGLPVPRLLLLLAVLQKRLGYDMGSREVYLNIVGGLKVQETAADLAVALAVVSSYTTIPVRSDTCFIGEIGLGGELRPVQQLPRRIQEAETFGFSRVVVPFTRKNRSAGPRRGRGADGGKVAASTAAVGSRGGGRRGEIEVVECRNLKDAVAAGLTAVPKKRSYNRSGRRPSPSTSPAAREGGR-RGRYEPS 2654
P CF+ P+ C + ++ R +Q++ R P A R +DE W+EG+ ES E + KAG PMPRMVSWGLNSRSQP+ARKALGS+ KTHTIV+VCEVCGSEHVQWVGRCPTCKEWNCVKPFKVRREQGS+PSRVSRA ++ + G R GG GGD EFSGL GGAFG SGGAGWLPE+GFA P LSEVGEAEKQ RMPLPG+ELPRVLGGGLVPGSMVMLGGDPGVGKSTLLLQLAGQL G DA +AE RAGTVVYISGEENNSQVAARA RMGI GVDLFLYCETDIDVIIDQ +L MQPQPALVMVDSIQTMRTQDSTSSPGSVTQVKECASRLVRLAKGSGITVFIVGHVTKSGSIAGPKVVEHMVDTVLYLEGDRFNSYRLLRSVKNRFGPSNEIGVFQME+GGLDDVADPSMLFLSDK+VD D+ E MDGSAVCVYMEGSRPILCELQSLVTY+RLPSPRRTSDGLP+PRLLLLLAVLQKRLGYDM SREVYLNIVGGLKVQETAADLAVALAVVSSYTTIPVR DTCFIGEIGLGGELRPVQQLPRRIQEAETFGFSRVVVPFTRKNRSA R G A +VAA + G+ GRRG IEV+ECRNLKDAVAAGLTAVPKKR + R GG+ RGR++PS
Sbjct: 35 PLPCFVTPVGGCSVGQEQRRSICFEDQQQKHGRPITPRSARRPREDERSSSDTGGSWNEGEDDESVPERRSGKAGTPMPRMVSWGLNSRSQPSARKALGSNKKTHTIVYVCEVCGSEHVQWVGRCPTCKEWNCVKPFKVRREQGSSPSRVSRAAAASVTAGARGGGRGASGGDPEFSGLGGGAFGGSGGAGWLPEEGFAAPTLLSEVGEAEKQGRMPLPGTELPRVLGGGLVPGSMVMLGGDPGVGKSTLLLQLAGQLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGEDATPVTEAERCRAGTVVYISGEENNSQVAARAARMGIGGVDLFLYCETDIDVIIDQ--MLVMQPQPALVMVDSIQTMRTQDSTSSPGSVTQVKECASRLVRLAKGSGITVFIVGHVTKSGSIAGPKVVEHMVDTVLYLEGDRFNSYRLLRSVKNRFGPSNEIGVFQMEAGGLDDVADPSMLFLSDKNVDDDDHAEHMDGSAVCVYMEGSRPILCELQSLVTYTRLPSPRRTSDGLPIPRLLLLLAVLQKRLGYDMSSREVYLNIVGGLKVQETAADLAVALAVVSSYTTIPVRPDTCFIGEIGLGGELRPVQQLPRRIQEAETFGFSRVVVPFTRKNRSARSRGGGRAGKARVAAGVSEAGN--DGRRGAIEVIECRNLKDAVAAGLTAVPKKRGGG------------SRRSGGKGRGRFDPS 732
BLAST of mRNA_P-littoralis_Contig192.52.6 vs. uniprot
Match: A0A836CK68_9STRA (P-loop containing nucleoside triphosphate hydrolase protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CK68_9STRA) HSP 1 Score: 440 bits (1132), Expect = 8.740e-138 Identity = 273/576 (47.40%), Postives = 338/576 (58.68%), Query Frame = 3
Query: 765 PRMVSWGLNSRSQPNARKALGSSSKTHTIVHVCEVCGSEHVQWVGRCPTCKEWNCVKPFKVRREQGSNPSRVSRAGVSAASVGVRPGGGGDLEFSGLAGGAFGSSGGAGWLPE--DGFAVPMRLSEVGEAEKQERMPLPGS-ELPRVLGGGLVPGSMVMLGGDPGVGKSTLLLQLAGQLASSQAGCVTGTFEEKEDDDRHQGEGRVEEGGDAGAKADAEAFRA-------------------GTVVYISGEENNSQVAARAKRMGISGVDLFLYCETDIDVIIDQASVLSMQPQPALVMVDSIQTMRTQDSTSSPGSVTQVKECASRLVRLAKGSGITVFIVGHVTKSGSIAGPKVVEHMVDTVLYLEGDRFNSYRLLRSVKNRFGPSNEIGVFQMESGGLDDVADPSMLF----LSDKHVDGDEGDESMDGSAVCVYMEGSRPILCELQSLVTYSRLPSPRRTSDGLPVPRLLLLLAVLQKRLGYDMGSREVYLNIVGGLKVQETAADLAVALAVVSSYTTIPVRSDTCFIGEIGLGGELRPVQQLPRRIQEAETFGFSRVVVPFTRKNRSAGPR 2414
PR +S+GL SRS P+ RKALGS SKTH V+VCEVCG+E VQWVGRCPTCKEWN V+ KVRR+ AGWL DG+ + RL+++ E Q R+ LPG+ E RVLGGGLVPGSMVM+GGDPGVGKSTLLLQLAG+LA + + G+VVY+SGEE+ Q+AARA+R+G+ +L+L ETDI +I D +M P PALV++DSIQTM++ D +S+ GS TQV++ AS L+RLAK + I V I+GHVTKSG IAGP+ VEHMVDTVLYLEGD N+YRLLRSVKNRFG +EIGVF+M S GL +VA+PS+LF L D DG+ G ++ DG+AV V MEG+RP+LCE +LVT SR+ +PRR ++G+ RL LLLAVLQ+RL Y SREVY+N+VGGL++Q GELR VQQL RRI EA +GF RVVVP R AG R
Sbjct: 85 PRFISYGLQSRSAPSTRKALGSGSKTHATVYVCEVCGAEQVQWVGRCPTCKEWNSVREHKVRRDGXXXXXXXXXXXXXXXXXXXXX---------------XXXXXXAGWLVPGADGYGIATRLTDITSEEAQRRVELPGAAEFARVLGGGLVPGSMVMIGGDPGVGKSTLLLQLAGRLAGXXXXXXXXXXXXSDTEHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSIGSVVYVSGEESTGQIAARAQRLGLQSPNLYLLAETDIHMICDGLE--AMCPPPALVVIDSIQTMQSPDLSSAAGSTTQVRDTASCLLRLAKSTDIAVVIIGHVTKSGDIAGPRTVEHMVDTVLYLEGDPLNAYRLLRSVKNRFGSCHEIGVFEMTSLGLQEVANPSLLFTSTALGDDDEDGEGGGQAPDGTAVLVAMEGTRPLLCE--ALVTPSRMVAPRRAAEGVGQQRLQLLLAVLQRRLRYPTSSREVYVNVVGGLRLQ----------------------------------GELRMVQQLQRRIAEAGKYGFKRVVVPA---GRGAGSR 604
BLAST of mRNA_P-littoralis_Contig192.52.6 vs. uniprot
Match: A0A838RJB1_9CHLR (DNA repair protein RadA n=1 Tax=Ardenticatenales bacterium TaxID=2614248 RepID=A0A838RJB1_9CHLR) HSP 1 Score: 409 bits (1050), Expect = 1.920e-128 Identity = 231/512 (45.12%), Postives = 318/512 (62.11%), Query Frame = 3
Query: 852 VHVCEVCGSEHVQWVGRCPTCKEWNCVKP-FKVRREQGS-NPSRVSRAGVSAASVGVRPGGGGDLEFSGLAGGAFGSSGGAGWLPEDGFAVPMRLSEVGEAEKQERMPLPGSELPRVLGGGLVPGSMVMLGGDPGVGKSTLLLQLAGQLASSQAGCVTGTFEEKEDDDRHQGEGRVEEGGDAGAKADAEAFRAGTVVYISGEENNSQVAARAKRMGISGVDLFLYCETDIDVIIDQASVLSMQPQPALVMVDSIQTMRTQDSTSSPGSVTQVKECASRLVRLAKGSGITVFIVGHVTKSGSIAGPKVVEHMVDTVLYLEGDRFNSYRLLRSVKNRFGPSNEIGVFQMESGGLDDVADPSMLFLSDKHVDGDEGDESMDGSAVCVYMEGSRPILCELQSLVTYSRLPSPRRTSDGLPVPRLLLLLAVLQKRLGYDMGSREVYLNIVGGLKVQETAADLAVALAVVSSYTTIPVRSDTCFIGEIGLGGELRPVQQLPRRIQEAETFGFSRVVVP 2381
V++C CG+EH +WVGRC C EWN ++ + R GS R +RAG AS + P+++ ++ EA ER+PLP E RVLGGG+VPGS+V++GGDPG+GKSTLL Q++G LA + G V+Y+SGEE+ QV RA+R+G++ DL+L ET++D+ I+ + L +P V++DSIQT+ QD +SS GS++QV+ECA+RL++LAKG + +F+VGHVTK G+IAGP+V+EH+VDTVLYLEGDRFN++RLLR+ KNRFG +NE+GVF+M GG+ +V +PS FL+D GSAV V MEG+RPIL E+QSLVT S PRRT++G+ + RL LLLAVL KR+G + +++V++N+VGGL++ E AADLA+A A+ SSY + D +GEIGLGGELRPV QL +R+ EA GF+R VVP
Sbjct: 7 VYLCRECGAEHAKWVGRCRDCGEWNTLEETVQEPRASGSFGFGRQARAGTLVASNNL----------------------------------PLKIGDI-EANAYERIPLPMEEFTRVLGGGVVPGSLVLVGGDPGIGKSTLLSQVSGMLAEAL----------------------------------------GPVLYLSGEESVYQVKMRAERLGMADKDLYLLSETNLDIAIEHINTL----RPKAVIIDSIQTVYLQDLSSSAGSISQVRECAARLMQLAKGENLPIFLVGHVTKEGAIAGPRVLEHIVDTVLYLEGDRFNTFRLLRAQKNRFGSTNEVGVFEMVEGGMVEVPNPSEAFLADYQA-------GATGSAVAVTMEGTRPILVEMQSLVTQSAFSQPRRTANGVDMNRLHLLLAVLGKRVGLQLFNQDVFVNVVGGLRISEPAADLAIAAAITSSYREKSIPRDLALVGEIGLGGELRPVSQLDKRLNEAAKLGFTRCVVP 432
BLAST of mRNA_P-littoralis_Contig192.52.6 vs. uniprot
Match: A0A800BRF5_9CHLR (DNA repair protein RadA n=1 Tax=Anaerolineae bacterium TaxID=2052143 RepID=A0A800BRF5_9CHLR) HSP 1 Score: 399 bits (1025), Expect = 6.810e-125 Identity = 229/519 (44.12%), Postives = 313/519 (60.31%), Query Frame = 3
Query: 855 HVCEVCGSEHVQWVGRCPTCKEWNCVKPFKVRREQGSNPSRVSRAGVSAASVGVRPGGGGDLEFSGLAGGAFGSSGGAGWLPEDGFAVPMRLSEVGEAEKQERMPLPGSELPRVLGGGLVPGSMVMLGGDPGVGKSTLLLQLAGQLASSQAGCVTGTFEEKEDDDRHQGEGRVEEGGDAGAKADAEAFRAGTVVYISGEENNSQVAARAKRMGISGVDLFLYCETDIDVIIDQASVLSMQPQPALVMVDSIQTMRTQDSTSSPGSVTQVKECASRLVRLAKGSGITVFIVGHVTKSGSIAGPKVVEHMVDTVLYLEGDRFNSYRLLRSVKNRFGPSNEIGVFQMESGGLDDVADPSMLFLSDKHVDGDEGDESMDGSAVCVYMEGSRPILCELQSLVTYSRLPSPRRTSDGLPVPRLLLLLAVLQKRLGYDMGSREVYLNIVGGLKVQETAADLAVALAVVSSYTTIPVRSDTCFIGEIGLGGELRPVQQLPRRIQEAETFGFSRVVVPFTRKNRSAGP 2411
++C+ CG +W+GRCP C EWN + V RE+ PS V P + P L ++ AE ER+P+P EL RVLGGG+VPGS+V++GGDPG+GKSTLLLQL+ LAS G V+YISGEE+ Q+ RA R+GI+ L++ E ++D II+ L+ P +V+VDSIQ++ +++ S+ GSV QVKECAS L+RLAK +GI +F+VGHVTK+G+IAGPKV+EH+VD VLYLEGDRF++YRLLRSVKNRFG +NE+GVF+M GL +VA+PS FL+++ + GSA+ V MEG+RP+L E+Q+L + + PRRT++G+ RLLLL+AVL KR+G + +++++N+VGGLKV E AADLA+A+A+ SSY +PV +D +GEIGL GELR V QL RR+ EA GF R VVP + + R P
Sbjct: 10 YICQNCGYSSPKWMGRCPNCGEWNTLVETVVEREERPRPS-------------VMP-----------------------------TSEPQPLPQI-SAEGFERIPVPIGELSRVLGGGIVPGSVVLIGGDPGIGKSTLLLQLSSLLASPD----------------------------------------GAVLYISGEESPQQIKMRADRLGIANQALYILAEVNLDQIINHIERLN----PKMVVVDSIQSVYSEELMSAAGSVGQVKECASTLLRLAKATGIPIFLVGHVTKAGAIAGPKVLEHIVDAVLYLEGDRFHAYRLLRSVKNRFGSTNEVGVFEMGDRGLAEVANPSEAFLAERLP-------NASGSAIAVTMEGTRPLLVEIQALTSTTSFGHPRRTANGVDFNRLLLLVAVLSKRVGLRLSDQDIFVNVVGGLKVNEPAADLAIAVAIASSYKNVPVAADMAIVGEIGLSGELRAVSQLERRLSEAAKLGFRRCVVPKSLRRRVKAP 434
BLAST of mRNA_P-littoralis_Contig192.52.6 vs. uniprot
Match: A0A0N0RFU1_9CHLR (DNA repair protein RadA n=1 Tax=Ardenticatena maritima TaxID=872965 RepID=A0A0N0RFU1_9CHLR) HSP 1 Score: 394 bits (1012), Expect = 6.840e-123 Identity = 228/517 (44.10%), Postives = 306/517 (59.19%), Query Frame = 3
Query: 837 KTHTIVHVCEVCGSEHVQWVGRCPTCKEWNCVKPFKVRREQGSNPSRVSRAGVSAASVGVRPGGGGDLEFSGLAGGAFGSSGGAGWLPEDGFAVPMRLSEVGEAEKQERMPLPGSELPRVLGGGLVPGSMVMLGGDPGVGKSTLLLQLAGQLASSQAGCVTGTFEEKEDDDRHQGEGRVEEGGDAGAKADAEAFRAGTVVYISGEENNSQVAARAKRMGISGVDLFLYCETDIDVIIDQASVLSMQPQPALVMVDSIQTMRTQDSTSSPGSVTQVKECASRLVRLAKGSGITVFIVGHVTKSGSIAGPKVVEHMVDTVLYLEGDRFNSYRLLRSVKNRFGPSNEIGVFQMESGGLDDVADPSMLFLSDKHVDGDEGDESMDGSAVCVYMEGSRPILCELQSLVTYSRLPSPRRTSDGLPVPRLLLLLAVLQKRLGYDMGSREVYLNIVGGLKVQETAADLAVALAVVSSYTTIPVRSDTCFIGEIGLGGELRPVQQLPRRIQEAETFGFSRVVVPFT 2387
K V+VCE CG+EH +W GRC TC +N +K FK+ E + + + G S P RL+EV EAE +R+PL E RVLGGG+VPGS+V++GGDPG+GKSTLLLQ+AG+LA Q G V+Y+SGEE+ Q+ RA+R+GI DL+L ET+++ I+ L P V+VDSIQT+ SS GSVTQV+ECA+RL++ AK I +F+VGHVTKSG IAGP+V+EH+VD VLYLEGDR ++YRLLRSVKNRFG ++E+GVF+M G+ +VA+PS LFL D D G+A+ V +EG+R +L E+Q+L T + PRRT+ G + RL LL+AVL KR+G + ++++++N+VGGL++ E AADLAVALA+ SSY P+ IGEIGLGGELRPV QL +R+ EA GF+ +VP T
Sbjct: 4 KKARTVYVCEECGAEHPKWGGRCLTCGAYNSLKEFKIAPEPSTRHTAQTWLGASDN-------------------------------------PPRRLTEV-EAEAMQRIPLTNREFARVLGGGIVPGSLVLIGGDPGIGKSTLLLQVAGELAERQ----------------------------------------GVVLYVSGEESTHQIRMRAERLGIHAADLYLLSETNLERIVAHIQHL----HPRAVIVDSIQTVYLDSLASSAGSVTQVRECAARLLQTAKILNIPIFLVGHVTKSGDIAGPRVLEHIVDAVLYLEGDRLHAYRLLRSVKNRFGSTHEVGVFEMAERGMLEVANPSELFLGDHRAD-------PTGAAIAVTLEGTRALLVEIQALSTTTAFSQPRRTATGFDLNRLYLLIAVLTKRVGLKLHNQDIFVNVVGGLRIAEPAADLAVALAIASSYREKPISRRMAAIGEIGLGGELRPVGQLEKRLSEAAKLGFTHCLVPKT 431
BLAST of mRNA_P-littoralis_Contig192.52.6 vs. uniprot
Match: A0A1W9UIT2_9CHLR (DNA repair protein RadA (Fragment) n=1 Tax=Anaerolineaceae bacterium 4572_32.1 TaxID=1971623 RepID=A0A1W9UIT2_9CHLR) HSP 1 Score: 392 bits (1008), Expect = 8.630e-123 Identity = 224/519 (43.16%), Postives = 320/519 (61.66%), Query Frame = 3
Query: 828 SSSKTHTIVHVCEVCGSEHVQWVGRCPTCKEWNCVKPFKVRREQGS-NPSRVSRAGVSAASVGVRPGGGGDLEFSGLAGGAFGSSGGAGWLPEDGFAVPMRLSEVGEAEKQERMPLPGSELPRVLGGGLVPGSMVMLGGDPGVGKSTLLLQLAGQLASSQAGCVTGTFEEKEDDDRHQGEGRVEEGGDAGAKADAEAFRAGTVVYISGEENNSQVAARAKRMGISGVDLFLYCETDIDVIIDQASVLSMQPQPALVMVDSIQTMRTQDSTSSPGSVTQVKECASRLVRLAKGSGITVFIVGHVTKSGSIAGPKVVEHMVDTVLYLEGDRFNSYRLLRSVKNRFGPSNEIGVFQMESGGLDDVADPSMLFLSDKHVDGDEGDESMDGSAVCVYMEGSRPILCELQSLVTYSRLPSPRRTSDGLPVPRLLLLLAVLQKRLGYDMGSREVYLNIVGGLKVQETAADLAVALAVVSSYTTIPVRSDTCFIGEIGLGGELRPVQQLPRRIQEAETFGFSRVVVP 2381
S S+T T+ ++C+ CGS ++W+GRCP C EWN + V R++ + + S++S +G + P RL++VG + ER+ LP E RVLGGG+V GS+V++GGDPG+GKSTLLLQ+A L G V+Y+SGEE+ Q+ R++R+GI L+L ET++DVI S Q +P +V+VDSIQT+ +D S+ GSV+QV+E AS+L+RLAK G+++F+VGHVTK+GSIAGP+V+EH+VDTVLYLEGDRF++YRLLRSVKNRFGP++E+GVF+M G+ +VA+PS FL+++ + GSA+ V MEG+RP+L E+Q+L + + PRRT++G+ + RLLLL+AVL KR+G + ++V+ N+VGGL++ E AADLA+A AV SS+ IPV +D +GEIGL GELR V Q+ RR+ EA GF R ++P
Sbjct: 2 SKSRTKTV-YLCQECGSSQLKWMGRCPDCGEWNTLVETIVERDRRAPHSSQMSLSGAESK--------------------------------------PQRLADVG-TDNMERITLPMPEFSRVLGGGVVRGSLVLIGGDPGIGKSTLLLQVASLLTQK-----------------------------------------GDVLYVSGEESAQQIKMRSQRLGIESNSLYLLTETNLDVI----SAHIQQLKPHVVVVDSIQTVYIEDLNSAAGSVSQVRESASQLMRLAKSQGVSIFLVGHVTKTGSIAGPRVLEHIVDTVLYLEGDRFHTYRLLRSVKNRFGPTSEVGVFEMAQQGMKEVANPSEAFLAERWP-------NAAGSAIAVTMEGTRPLLVEIQALSSATSFRLPRRTANGIDLNRLLLLVAVLSKRVGLQLSDQDVFANVVGGLRIAEPAADLALATAVASSFQNIPVAADMVVVGEIGLSGELRMVGQVERRLNEASKLGFRRCLMP 428
BLAST of mRNA_P-littoralis_Contig192.52.6 vs. uniprot
Match: UPI001AC69C1C (DNA repair protein RadA n=1 Tax=Thermoflexales bacterium TaxID=2497639 RepID=UPI001AC69C1C) HSP 1 Score: 392 bits (1006), Expect = 4.530e-122 Identity = 226/522 (43.30%), Postives = 318/522 (60.92%), Query Frame = 3
Query: 828 SSSKTHTIVHVCEVCGSEHVQWVGRCPTCKEWNCVKPFKVRREQGSNPSRVSRAGVSAASVGVRPGGGGDLEFSGLAGGAFGSSGGAGWLPEDGFAVPMRLSEVGEAEKQERMPLPGSELPRVLGGGLVPGSMVMLGGDPGVGKSTLLLQLAGQLASSQAGCVTGTFEEKEDDDRHQGEGRVEEGGDAGAKADAEAFRAGTVVYISGEENNSQVAARAKRMGISGVDLFLYCETDIDVIIDQASVLSMQPQPALVMVDSIQTMRTQDSTSSPGSVTQVKECASRLVRLAKGSGITVFIVGHVTKSGSIAGPKVVEHMVDTVLYLEGDRFNSYRLLRSVKNRFGPSNEIGVFQMESGGLDDVADPSMLFLSDKHVDGDEGDESMDGSAVCVYMEGSRPILCELQSLVTYSRLPSPRRTSDGLPVPRLLLLLAVLQKRLGYDMGSREVYLNIVGGLKVQETAADLAVALAVVSSYTTIPVRSDTCFIGEIGLGGELRPVQQLPRRIQEAETFGFSRVVVPFTRK 2393
+ +KT+T VC+ CGS ++W+GRCP C EWN +V E+ S SR GGG A P+RLS+V + + +R+P+ E RVLGGG+VPG +V++ GDPG+GKSTLL+Q+A Q+A++ G V+Y+SGEE+ Q+ RA+R+G G L+L ETD+D I + +++P+ L ++DSIQTM + TS+ GS++QV+ECA+RL +AKGSG +VFIVGHVTKSGSIAGPKV+EH+VDTVLYLEGDRF++YRLLRS KNRFG +NE+GVF+M G+ +V +PS FL+++ + GS++ V MEG+RP+L E+Q+L + S PRRT++GL + RLLLL AVL KR+G +G ++V+ N++GGL + E AADLA+A ++ SS +PV D IGE+GL GELR V QLP R+ EA GF+R ++P T++
Sbjct: 2 AKAKTYTQF-VCQQCGSVQLKWMGRCPDCGEWNSF--VEVIEERSSQKSRA---------------GGGQPR-----------------------ATPIRLSDV-KTDALDRIPMAMEEFSRVLGGGIVPGCLVLVSGDPGIGKSTLLMQVATQVAATH----------------------------------------GPVLYVSGEESAQQIKMRAQRLGDDGQQLYLLTETDLDEI--NLHIANLKPR--LAIIDSIQTMTVSELTSAAGSISQVRECAARLQGVAKGSGTSVFIVGHVTKSGSIAGPKVLEHIVDTVLYLEGDRFHTYRLLRSTKNRFGATNEVGVFEMRGSGMAEVLNPSEAFLAERLP-------NAPGSSIAVTMEGTRPLLVEVQALCSTSAFGLPRRTANGLDMNRLLLLTAVLSKRVGLKLGDQDVFANVIGGLHITEPAADLAMACSIASSMRDVPVAVDLAIIGEVGLSGELRTVGQLPARLNEAAKLGFARALIPKTQR 430
BLAST of mRNA_P-littoralis_Contig192.52.6 vs. uniprot
Match: A0A7C3B6J2_9CHLR (DNA repair protein RadA n=1 Tax=Caldilineae bacterium TaxID=2420332 RepID=A0A7C3B6J2_9CHLR) HSP 1 Score: 389 bits (1000), Expect = 3.100e-121 Identity = 220/509 (43.22%), Postives = 308/509 (60.51%), Query Frame = 3
Query: 855 HVCEVCGSEHVQWVGRCPTCKEWNCVKPFKVRREQGSNPSRVSRAGVSAASVGVRPGGGGDLEFSGLAGGAFGSSGGAGWLPEDGFAVPMRLSEVGEAEKQERMPLPGSELPRVLGGGLVPGSMVMLGGDPGVGKSTLLLQLAGQLASSQAGCVTGTFEEKEDDDRHQGEGRVEEGGDAGAKADAEAFRAGTVVYISGEENNSQVAARAKRMGISGVDLFLYCETDIDVIIDQASVLSMQPQPALVMVDSIQTMRTQDSTSSPGSVTQVKECASRLVRLAKGSGITVFIVGHVTKSGSIAGPKVVEHMVDTVLYLEGDRFNSYRLLRSVKNRFGPSNEIGVFQMESGGLDDVADPSMLFLSDKHVDGDEGDESMDGSAVCVYMEGSRPILCELQSLVTYSRLPSPRRTSDGLPVPRLLLLLAVLQKRLGYDMGSREVYLNIVGGLKVQETAADLAVALAVVSSYTTIPVRSDTCFIGEIGLGGELRPVQQLPRRIQEAETFGFSRVVVP 2381
+VC+ CGS H++W+GRCP C EWN + + ++G P+R +RA + V + + DGF ER+P+P EL RVLGGG+VPGS+V++GGDPG+GKSTLLLQL LA Q V+YISGEE+ +Q+ RA R+GI+ L++ +T ++ I+ Q ++ P + +VDSIQ + T TS+ GSV+QV+ECA++L+RLAK I +F+VGHVTK G+IAGP+V+EHMVDTVLYLEG+RF++YR+LRSVKNRFG +NE+GVF+M G+ +V +PS FL+++ + GSA+ V +EG+RP+L E+Q+L + + PSPRRT +G+ RLLLL+AVL KR+G + ++V++N+VGGL V+E AADLAVA A+ SS +PV +D IGE+GL GELR V QL RR+ EA GF R +VP
Sbjct: 8 YVCQQCGSAHMKWMGRCPDCGEWNTLVETVIEEDRG--PARRARATSDVSPVPLPD------------------------IAADGF---------------ERIPVPMGELSRVLGGGIVPGSVVLIGGDPGIGKSTLLLQLCALLAEDQ-----------------------------------------DVLYISGEESATQIKMRAARLGINNPHLYILADTHLETILAQIEHMN----PRIAVVDSIQAIYTDALTSAAGSVSQVRECAAQLLRLAKAQAIPIFLVGHVTKEGTIAGPRVLEHMVDTVLYLEGERFHTYRILRSVKNRFGSTNEVGVFEMVECGMQEVPNPSEAFLAERMP-------NAAGSAIAVTLEGTRPLLVEIQALSSTTSFPSPRRTGNGVDFNRLLLLVAVLSKRVGLRLSDQDVFVNVVGGLTVREPAADLAVACAIASSVRNVPVAADLAIIGEVGLSGELRSVHQLARRLSEAGQLGFRRCLVP 423
BLAST of mRNA_P-littoralis_Contig192.52.6 vs. uniprot
Match: A0A7S4HL01_9STRA (Hypothetical protein n=2 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4HL01_9STRA) HSP 1 Score: 398 bits (1022), Expect = 5.380e-121 Identity = 276/656 (42.07%), Postives = 362/656 (55.18%), Query Frame = 3
Query: 765 PRMVSWGLN-SRSQPNARKALGSSSKTHTIVHVCEVCGSEHVQWVGRCPTCKEWNCVKPFKVRREQGSNPSRVSRAGVSAASVGVRPGGGGDLEFSGLAGGAFGSSGGAGWLPEDGFAV-----PMRLSEVGEA------------EKQERMPLPGSE-LPRVLGGGLVPGSMVMLGGDPGVGKSTLLLQLAGQLASSQAGCVTGTFEEKEDDDRHQGEGRVEEGGDAGAKADAEAFRAGTVVYISGEENNSQVAARAKRMGISGVDLFLYCETDIDVIID--------------------QASVLSMQPQ--PALVMVDSIQTMRTQDSTSSP-GSVTQVKECASRLVRLAKGSGITVFIVGHVTKSGSIAGPKVVEHMVDTVLYLEGDR-----FNSYRLLRSVKNRFGPSNEIGVFQMES--GGLDDVADPSMLFLSDKHVDGDEGDESMDGSAVCVYMEGSRPILCELQSLVTYSRLP----SPRRTSDGLPVPRLLLLLAVLQKRLGYDMGSREVYLNIVGGLKV-----QETAADLAVALAVVSSYTTIPVRSDTCFIGEIGLGGELRPVQQLPRRIQEAETFGFSRVVVP-FTRKNRSAGPR-RGRGADGGKVAASTAAVGSRGGGRRGEIEVVECRNLKDAVAAGLTA 2552
P M+S+GL RS P+ RKA+G S + T VHVC CGSE+V+W+GRCPTCKEWN ++ F+V R P + G S S+ RP F G + G WL DG + P+R++++ E R+ +PG E L VLGGG++PGS+ +LGGDPGVGKSTLLLQ AG +AS R G G+ + D + G V+Y+SGEEN QVA+RA R+GI +L CET+ D I D + + PQ P LV++DSIQTM SS G VTQV+EC +RLAK +G + +VGHVTKSG +AGP+ VEHMVD VLYLEGDR N R+LRS KNRFG S E+GV++M G L V+DPS LFLS++ D DG A+ V +EG R I E+Q+LV S + S RRT DG+ RLLL+LAVLQKR G +V++N+VGG+++ Q + +D+A A+A+VSS T I VR+DTCF+GE+GL GELR V L +R+ EA GFSR+V P R++R R +G DG IE V+C NL DA++AGL +
Sbjct: 79 PGMMSFGLGRGRSAPSHRKAVGRSGSSSTSVHVCTNCGSEYVKWIGRCPTCKEWNTIQEFRVNR---GGPGGAN--GSSFGSIRSRP------SFDGESDVRVGHPRKTTWL--DGVEIGTSHKPVRMTDIYEEMGFDSENPSSFRPGDNRLCVPGDEELNNVLGGGIMPGSLTLLGGDPGVGKSTLLLQTAGAVASLSL------------PSRGIGMGKDDNSQDK---------QCGPVIYVSGEENAMQVASRAARLGIRETELLFLCETNADFISDTVASYYDRTLGESIDFSSEKEEASYQAGPQRPPCLVVIDSIQTMICDSGGSSAAGGVTQVRECVGVFLRLAKITGTPIVLVGHVTKSGGVAGPRTVEHMVDCVLYLEGDRSSSGGLNHLRMLRSAKNRFGSSEEVGVYEMHQRYGKLVPVSDPSSLFLSNRFDTFDS-----DGCAITVVLEGMRAITVEVQALVAPSSIGGKSFSGRRTVDGISTARLLLILAVLQKRCGVSFSRFDVFINVVGGIRLSNGSRQGSESDVATAVALVSSLTGIAVRADTCFVGEVGLLGELRQVSSLEKRVNEARRMGFSRIVTPDLGRRSRGRRVREKGNYVDG--------------------IEWVKCENLLDAISAGLVS 675
BLAST of mRNA_P-littoralis_Contig192.52.6 vs. uniprot
Match: A0A482SXN0_9ARCH (DNA repair protein RadA n=1 Tax=archaeon TaxID=1906665 RepID=A0A482SXN0_9ARCH) HSP 1 Score: 392 bits (1008), Expect = 8.080e-121 Identity = 229/545 (42.02%), Postives = 326/545 (59.82%), Query Frame = 3
Query: 762 MPRMVSWGLNSRSQPNARKALGSSSKTHTIVHVCEVCGSEHVQWVGRCPTCKEWNCVKPFKVRREQGSNPSRVSRAGVSAASVGVRPGGGGDLEFSGLAGGAFGSSGGAGWLPEDGF--AVPMRLSEVGEAEKQERMPLPGSELPRVLGGGLVPGSMVMLGGDPGVGKSTLLLQLAGQLASSQAGCVTGTFEEKEDDDRHQGEGRVEEGGDAGAKADAEAFRAGTVVYISGEENNSQVAARAKRMGISGVDLFLYCETDIDVIIDQASVLSMQPQPALVMVDSIQTMRTQDSTSSPGSVTQVKECASRLVRLAKGSGITVFIVGHVTKSGSIAGPKVVEHMVDTVLYLEGDRFNSYRLLRSVKNRFGPSNEIGVFQMESGGLDDVADPSMLFLSDKHVDGDEGDESMDGSAVCVYMEGSRPILCELQSLVTYSR---LPSPRRTSDGLPVPRLLLLLAVLQKRLGYDMGSREVYLNIVGGLKVQETAADLAVALAVVSSYTTIPVRSDTCFIGEIGLGGELRPVQQLPRRIQEAETFGFSRVVVP 2381
+ R +G+ R KALG K +VCEVCG+EHV+W GRC +CKEWN +K FKV R ++ + VSAA SS A W+ D + +S + + ++R+ + E+ RVLGGGLV GS+ +L G+PGVGKST+LLQLA +A VVYISGEEN Q+A R KR+ ++ +++L C+ ++D ++D S + P+L++VDSIQTMRT D S GSV+Q+++ A+RLV+ AK + ++ +VGHVTK G +AGP+V+EHMVDT+LYLEG +R+LR+VKNRFG +NE+GV M G+ DV++PS LF++ + + E+ +GSAV V MEGSR +L E+Q LV++S + RR +DG P+ RLLL+ AV++KRL +GSR+VYLN+VGGL++ E ADLAVA+A+VSS T+I ++ T FIGE+GLGGELR +++ +RI EA GF RV++P
Sbjct: 28 LSRKHIYGVAVRHSQLFAKALGF--KASAEAYVCEVCGTEHVKWQGRCNSCKEWNTIKAFKVARASSNSYLPPLDSRVSAAQS---------------------SSTKARWINVDVVTNSTLQPMSSIETEDSKQRLTMYSQEVNRVLGGGLVKGSVTLLAGEPGVGKSTILLQLASDIAKKYT----------------------------------------NVVYISGEENQFQLAMRGKRLHLNTDNIYLICDVEMDRVLDMVS--TFHTSPSLLIVDSIQTMRTADCQGSIGSVSQIRDTAARLVQFAKSTSTSIILVGHVTKMGDVAGPRVLEHMVDTLLYLEGSDSADHRILRTVKNRFGSANEVGVLTMTEDGMQDVSNPSALFINSRTLT-----EAQEGSAVMVAMEGSRALLAEVQCLVSFSYGSGKVAARRAADGFPIQRLLLICAVIEKRLRLSLGSRDVYLNVVGGLRISEPTADLAVAMAIVSSLTSIAIQPATVFIGELGLGGELRGGKRVEQRIGEAIARGFKRVILP 502 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig192.52.6 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig192.52.6 >prot_P-littoralis_Contig192.52.6 ID=prot_P-littoralis_Contig192.52.6|Name=mRNA_P-littoralis_Contig192.52.6|organism=Pylaiella littoralis U1_48|type=polypeptide|length=888bp MRSAAVAVACGLALASLPTPNAEAVEHTREHRAAAAATTTRSDRLALNCNback to top mRNA from alignment at P-littoralis_Contig192:263344..278213+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig192.52.6 ID=mRNA_P-littoralis_Contig192.52.6|Name=mRNA_P-littoralis_Contig192.52.6|organism=Pylaiella littoralis U1_48|type=mRNA|length=14870bp|location=Sequence derived from alignment at P-littoralis_Contig192:263344..278213+ (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig192:263344..278213+ >mRNA_P-littoralis_Contig192.52.6 ID=mRNA_P-littoralis_Contig192.52.6|Name=mRNA_P-littoralis_Contig192.52.6|organism=Pylaiella littoralis U1_48|type=CDS|length=2664bp|location=Sequence derived from alignment at P-littoralis_Contig192:263344..278213+ (Pylaiella littoralis U1_48)back to top |