mRNA_P-littoralis_Contig192.31.2 (mRNA) Pylaiella littoralis U1_48
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Overview
Homology
BLAST of mRNA_P-littoralis_Contig192.31.2 vs. uniprot
Match: D7FML5_ECTSI (Putative: similar to cytoplasmic dynein intermediate chain n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FML5_ECTSI) HSP 1 Score: 1015 bits (2625), Expect = 0.000e+0 Identity = 562/709 (79.27%), Postives = 600/709 (84.63%), Query Frame = 3
Query: 63 MADAEAVRQQRXXXXXXXXXXXXXXXXXXXXXXXXXXXASDAAATPQQQADGEPADSSSGTSLAKVSVAAGGGADLDDYIKNLLSMPAPGGSTEDQARASPPDPVGVGNLSGSS---GSDRRVAERLSSLTVTCGLGSVDVLPKTIELYDKGCQTDL---AGTAAHGGGEVEEDGGAVGAQPTSSVKKTSDKRRNHLRVFGRGGKGVPVPDGSDGEDLGYPPTVGPSLIAASSPSRPGSRT-VVSTPGSRSGRGLADGSGGMAALPMTPPSSAAQPLSVEDKKEIVQTDHFQASDFLRRSSRVLERALGEREALDVLLDYAADEGDGSRGDQGQRLNEAMTLHEDRWCQERALTDLQWSPHHPELVLASYSARGHGLDATSSSALHTDADGLVLVWSMAMQHRPEYQLSSQSPVLTAKFHPFDTHVIIGGTYSGQVVVWDTRAKSLPVQRTPLSTAGHTYPVYNLHIGGTDNAPSLLTASTEGRVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEQKDLVVGSESGGIYTTPLHFRNSGAVEEYSGHYGLVTSVDANPSASKSLRGLVLSSSVDWTTRLWRLGKGSNTPIQSLTHGTYDYVCDAKWSPKHPALFVTANISGELGLWNLNHSMEEPFTPPVKVVVDRCALTRMAWSPDGRRLCVGDDKGYARIFNMDQETALPRPDEELRLEAALAVKGNGAVP 2168
MADA+AVRQQR XXXXXXXXXXX ASDAAAT Q+QADGE +++ G+ +A GGADLD YIK+LLS PAPGG E+ R+ PP P GV +G S GSDRR A+RLSSLT+ CGLGSVDV PK+ E YDKGCQ DL AGT A G +E AVGAQ +SS K+T DKRRNH RVFGRGGKGVPVPDGS+GEDLGYPP+ PSL+AASSPSRPG R V STPGSRSGR DG+GGM ALPMTPP++AA+PLSV++KKEIVQTDHFQ DFLRRSSRVLERALGE+EALDVLLDYA DEGD RGDQGQRLNEAMTLHEDRWCQER+LTDLQWSPHHPELVLASY+ARGHGLDATSSSALHTDADGLVLVWSMAMQHRPEYQLSSQSPVLTA+FHPFDTHVIIGGTYSGQVVVWDTRAKSLPVQRTPLS GHTYPVYNLHIGGTDNAPSLLTASTEGRV XXXXXXXXXXXXXXXXXX EQK++VVGSESGGIYTTPLHFRNSG VEEYSGHYGLVTSVDANPSASK LRGLVLSSSVDWTTRLWRLG+GSN +Q+LTHGTYDYVCDAKWSPKHPALFVTANISGELGLWNLNHSMEEPFTPPVKVV DRCALTRMAWSPDGRRLCVGD KGYAR+FNMDQETALPR DE+LRLEAALAVK NG +P
Sbjct: 1 MADADAVRQQRQKQLEDKRRRLDALXXXXXXXXXXXKIASDAAATAQKQADGEAENAAPGSPVAT------GGADLDAYIKSLLSTPAPGGGAEEDGRSPPPAP-GVSTSTGGSSWAGSDRRAADRLSSLTIVCGLGSVDVAPKSTEFYDKGCQADLGGAAGTGAQGTAGADEGVDAVGAQSSSSAKRTPDKRRNHRRVFGRGGKGVPVPDGSEGEDLGYPPSGAPSLVAASSPSRPGVRQPVASTPGSRSGRWTGDGTGGMTALPMTPPATAAKPLSVDEKKEIVQTDHFQ--DFLRRSSRVLERALGEKEALDVLLDYAGDEGDSGRGDQGQRLNEAMTLHEDRWCQERSLTDLQWSPHHPELVLASYTARGHGLDATSSSALHTDADGLVLVWSMAMQHRPEYQLSSQSPVLTARFHPFDTHVIIGGTYSGQVVVWDTRAKSLPVQRTPLSATGHTYPVYNLHIGGTDNAPSLLTASTEGRVSTXXXXXXXXXXXXXXXXXXGKPVTISSMAVAQGDEQKNIVVGSESGGIYTTPLHFRNSGVVEEYSGHYGLVTSVDANPSASKPLRGLVLSSSVDWTTRLWRLGQGSNACVQTLTHGTYDYVCDAKWSPKHPALFVTANISGELGLWNLNHSMEEPFTPPVKVV-DRCALTRMAWSPDGRRLCVGDAKGYARVFNMDQETALPRTDEDLRLEAALAVKANGTIP 699
BLAST of mRNA_P-littoralis_Contig192.31.2 vs. uniprot
Match: A0A836C896_9STRA (WD40-repeat-containing domain protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C896_9STRA) HSP 1 Score: 362 bits (929), Expect = 9.220e-113 Identity = 192/425 (45.18%), Postives = 267/425 (62.82%), Query Frame = 3
Query: 903 TDHFQASDFLRRSSRVLERALGEREALDVLLDYAADEGDGSRGDQGQ-RLNEAMTLHEDRWCQERALTDLQWSPHHPELVLASYSARGHGLDATSS-----SALHTDADGLVLVWSMAMQHRPEYQLSSQSPVLTAKFHPFDTHVIIGGTYSGQVVVWDTRAKSLPVQRTPLSTAGHTYPVYNLHIGGTDNAPSLLTASTEGRVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX------EQKDLVVGSESGGIYTTPLHFRNSGAVEEYSGHYGLVTSVDANPSASKSLRGLVLSSSVDWTTRLWRLGKGSNTPIQSLTHGTYDYVCDAKWSPKHPALFVTANISGELGLWNLNHSMEEPFTPPVKVVVDRCALTRMAWSPDGRRLCVGDDKGYARIFNMDQETALPRPDEELRLEAAL 2141
TD F S FL+R V+ERAL E+ D+L DY+ +G S G +L++ + ++ WC +RA+TD+ WSPH+PEL+L +YSA G G + S+ +A DGLVLVWS+A+ RPE+ L SQSP+LTA+FH FD H+++GG+YSGQVV WD RA SLPVQ+TP+S A HT P++ + + GT A +L+TAST+GRV E L+VG +SG I +H ++G E+ GH+G+VT++D NPS +K+L+ LVLSSS+DWTTRLW L + S+ P+ + +H +YDYVCD +WSP HPALF TAN++G+L LWN+ S++ P TPP KV + ALT++AWS +G RL GD G ++ + ++ ALPR DEE RLE L
Sbjct: 54 TDSF--SKFLKRCGTVVERALTEQATFDILKDYS--KGATSERTHGSDQLHKLLRFYDPTWCGDRAITDVHWSPHYPELLLVAYSASGRGQNLESALLGAPAAGDAHPDGLVLVWSLALPSRPEFILYSQSPILTARFHEFDAHLVVGGSYSGQVVTWDLRATSLPVQQTPVSDAAHTRPIFGMAMEGTGAAHALVTASTDGRVAWWNPRQLLQPNEVLQLALAQSDNDASGGGLSVSCIACVPGETVQLLVGMDSGRILAVAVHTHSAGVQREFHGHFGMVTALDTNPSKAKALQELVLSSSMDWTTRLWSL-RQSDKPLVTFSHDSYDYVCDVRWSPVHPALFATANVAGDLTLWNVTASLDTPVTPPCKVSGN--ALTKLAWSREGCRLAAGDVTGAVHVYAIAEDMALPRHDEEHRLERLL 471
BLAST of mRNA_P-littoralis_Contig192.31.2 vs. uniprot
Match: F4PS77_CAVFA (Cytoplasmic dynein intermediate chain n=1 Tax=Cavenderia fasciculata (strain SH3) TaxID=1054147 RepID=F4PS77_CAVFA) HSP 1 Score: 288 bits (738), Expect = 5.090e-83 Identity = 172/426 (40.38%), Postives = 239/426 (56.10%), Query Frame = 3
Query: 870 LSVEDKKEIVQTDHFQASDFLRRSSRVLERALGEREALDVLLDYA-ADEGDGSRGDQGQRLNEAMTLHEDRWCQERALTDLQWSPHHPELVLASYSARGHGLDATSSSALHTDADGLVLVWSMA-MQHRPEYQLSSQSPVLTAKFHPFDTHVIIGGTYSGQVVVWDTRAKSLPVQRTPLSTAGHTYPVYNLHIGGTDNAPSLLTASTEGRVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX--------EQKDLVVGSESGGIYTTPLHFRNSGAVEEYSGHYGLVTSVDANPS-ASKSLRGLVLSSSVDWTTRLWRLGKGSNTPIQSLTHGTYDYVCDAKWSPKHPALFVTANISGELGLWNLNHSMEEPFTPPVKVVVDRCALTRMAWSPDGRRLCVGDDKGYARIFNMDQETALPRPD 2114
L ++KKEI++++ F+ F RSS+V+ERAL + +D+L+DY D+ D S + L TL ++RW + R++TD+ WSP HPELV+ SYSA G D DG+VLVWS+ +PEY + QSPV+T F F +I+GGTYSGQ+VVWDTR+KS PVQRTPLS+ GHT+PVY++ + G+ NA +L++ ST+G++ E VGSE G IY H +G + Y GH+G +TS+D +PS S L LSSS DWTTRLW K + P+ S DYV DA+WSP HP++FVT + +G++ LW+LN EE P V+ + AL R++WS DG+RL VGD G +++ A P PD
Sbjct: 198 LDEQEKKEILESESFRT--FFTRSSKVIERALMLDDNIDILVDYTKTDDEDKSSS---KELKLMGTLVDERWSKHRSVTDINWSPKHPELVVTSYSANETGSH---------DPDGVVLVWSVNNFYQKPEYVFNCQSPVMTTFFSRFHPTLIVGGTYSGQIVVWDTRSKSTPVQRTPLSSVGHTHPVYSMSVVGSTNANTLISVSTDGKLCSWNLDNLSQPVETLDLNAKNNTSSTVSATSSIAVTSLVFQETEMNAFFVGSEDGSIYQAHRHGSKTGISDRYKGHHGPITSIDFHPSRGSIDFGNLFLSSSTDWTTRLWSTNK-TEAPVYSF-EDYVDYVYDARWSPVHPSVFVTGDGNGQMCLWDLN---EETDAPIVRNKISSHALNRLSWSGDGKRLLVGDSTGQLSLYDTSPY-ANPEPD 603
BLAST of mRNA_P-littoralis_Contig192.31.2 vs. uniprot
Match: UPI0006449257 (hypothetical protein n=1 Tax=Acytostelium subglobosum LB1 TaxID=1410327 RepID=UPI0006449257) HSP 1 Score: 286 bits (731), Expect = 5.360e-82 Identity = 170/428 (39.72%), Postives = 237/428 (55.37%), Query Frame = 3
Query: 870 LSVEDKKEIVQTDHFQASDFLRRSSRVLERALGEREALDVLLDYAADEGDGSRGDQGQRLNEAMTLHEDRWCQERALTDLQWSPHHPELVLASYSARGHGLDATSSSALHTDADGLVLVWSMAMQ-HRPEYQLSSQSPVLTAKFHPFDTHVIIGGTYSGQVVVWDTRAKSLPVQRTPLSTAGHTYPVYNLHIGGTDNAPSLLTASTEGRVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX------EQKDLVVGSESGGIYTTPLHFRNSGAVEEYSGHYGLVTSVDANPS-ASKSLRGLVLSSSVDWTTRLWRLGKGSNTPIQSLTHGTYDYVCDAKWSPKHPALFVTANISGELGLWNLNHSMEEPFTPPVKVVVDRCALTRMAWSPDGRRLCVGDDKGYARIFNMDQETALPRPDEELRL 2129
LS DK I+++D F++ F RSS+V+ERAL +++D+L+DY + D + L TL ++RW + R++TD+ WSP HPELV+ SYS S+ A D DG+VLVWS+ +PEY + QSPV+T F F +I+GGTYSGQ+VVWDTR+KS PVQRTPLS+ GHT+PVY++ + G+ NA SL++ ST+G++ E VG+E G IY H +G E + GHYG +TSVD +PS S L LSSS DWT +LW K + TPI S +YV DA+WSP P++F T + SG+L LW+LN E P ++ +L R++WS DG+RL GD G +++ Q A P+PD+ R
Sbjct: 201 LSEHDKNNILESDSFRS--FFSRSSKVIERALYLDDSIDILVDYT--KSDEVTKSSTKELTLVGTLADERWTKHRSVTDINWSPKHPELVVTSYS---------SNEAGSHDPDGVVLVWSVNNYFQKPEYTFNCQSPVMTTFFSRFHHTLIVGGTYSGQIVVWDTRSKSTPVQRTPLSSIGHTHPVYSMSVVGSANANSLVSISTDGKLCSWSLENLSQPIETLDLNSRNNTNISTTASIAVTSLVFPESEMNSFYVGTEEGVIYQAQRHGAKAGVNERFKGHYGPITSVDFHPSRGSTDFSNLFLSSSTDWTCKLWSTNK-TETPIYSF-EDYVEYVYDARWSPTAPSIFATGDGSGQLSLWDLNEETEAPI---FRIKPSSRSLNRISWSADGKRLLAGDSAGSLYLYDSSQ-FASPQPDDWNRF 609
BLAST of mRNA_P-littoralis_Contig192.31.2 vs. uniprot
Match: A0A2R5G024_9STRA (Cytoplasmic dynein 1 intermediate chain 2 n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5G024_9STRA) HSP 1 Score: 282 bits (721), Expect = 2.290e-80 Identity = 202/631 (32.01%), Postives = 308/631 (48.81%), Query Frame = 3
Query: 279 GADLDDYIKNLLSMPAPGGSTEDQARASPPDPVGVGNLSGSSGSDRRVAERLSSLTVTCGLGSVDVLPKTIELYDKGCQTDLAGTAAHGGGEVEEDGGAVG-AQPTSSVKKTSDKRRNHLRVFGRGGKGVPVPDGSDGEDLGYPPTVGPSLIAASSPSRPGSRTVVSTPGSRSGRGLADGSGGMAALPMTPPSSAAQPLSVEDKKEIVQTDHFQASDFLRRSSRVLERALGEREALDVLLDYAADEGDGSRGDQGQRLNEAMTLHEDRWCQERALTDLQWSPHHPELVLASYSAR--GHGLDATSSSALHTDADGLVLVWSMAMQ-HRPEYQLSSQSPVLTAKFHPFDTHVIIGGTYSGQVVVWDTRAKSLPVQRTPLSTAGHTYPVYNLHIGGTDNAPSLLTASTEGRVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEQKDLVVGSESGGIYTTPLHFRNSGAVEEYSGHYGLVTSVDANPSASKSLRGLVLSSSVDWTTRLWRLGKGSNTPIQSLTHGTYDYVCDAKWSPKHPALFVTANISGELGLWNLNHSMEEP---FTPPVKVVVD--RCALTRMAWSPDGRRLCVGDDKGYARIFNMDQETALPRPDEELRLEAALA 2144
G +LD+ I++LLS P+ ED A+ + + + R L +T LG+V+V + ++ YDKG QTD EV DGG G PTS KRR+ RGG S+ AA SPS P S + + A MT + ++ +++ + ++FL +S RV+ERA+ + D+ +DY E +G + +R+ + ++ ++RW + R +TD+QWSPHH EL LA+Y+ R LD ++ D G+VL+WS M RPEY + SPV A FHP+ +++IGGTYSGQ+V+WD RAKS+PVQR+ LS HT+PVY++ + G+ NA +L++ ST+GR+ E +L VG+E G ++ +H +G + H+G VT + + S + L+LS+S+DWT +LW G P+ G+ DYV D KWSP HP++F T N +G L +WN+N +E P F P+ AL + W+P GR++ GD +G +F++ + A PR DE RLE ++A
Sbjct: 83 GGNLDNLIESLLSAPSTEQDAEDAAQTQDHSATPTQDQADDAPRGRGPIVSLKRVTQ---LGTVNVALREVDTYDKGTQTDPLDDIDDNPNEV--DGGIRGPGSPTS-------KRRSW-----RGG----------------------SVQAAPSPSTPSSPRLAES-----------------AATMTETTXXXXXXXXXXERTVLEAEPSY-TNFLNQSVRVVERAMKQNSLFDITIDYGGLESNGQS--EAERITLSESISDERWSRGRTVTDIQWSPHHKELFLAAYTKRMVSSELDWARGAS---DPSGVVLIWSTHMSSERPEYVFTCPSPVHAACFHPYSANLVIGGTYSGQIVLWDMRAKSVPVQRSLLSPESHTHPVYSMTVTGSANAHNLVSVSTDGRLCVWNLANISAPTDSRQLKYNKKDVTATSLAFADG-ETNELFVGAEDGRLFRAQVHGTKAGVQSQTEAHFGPVTKMHFHKGTSATAD-LMLSASMDWTVKLWSHRSGDK-PLACF-EGSEDYVFDVKWSPVHPSVFATVNGAGMLDVWNINVDLEVPQARFKVPLPAGAQGATAALASLQWAPSGRKVLAGDARGNIHVFDLAADLANPRRDEWARLETSVA 647
BLAST of mRNA_P-littoralis_Contig192.31.2 vs. uniprot
Match: A0A0G4H2R6_VITBC (Uncharacterized protein n=2 Tax=Vitrella brassicaformis TaxID=1169539 RepID=A0A0G4H2R6_VITBC) HSP 1 Score: 281 bits (719), Expect = 6.320e-80 Identity = 166/432 (38.43%), Postives = 238/432 (55.09%), Query Frame = 3
Query: 870 LSVEDKKEIVQTDHFQASDFLRRSSRVLERALGEREALDVLLDY---AADEGDGSRGDQGQRLNEAMTLHEDRWCQERALTDLQWSPHHPELVLASYSARGHGLDATSSSALHTDADGLVLVWSMAMQHRPEYQLSSQSPVLTAKFHPFDTHVIIGGTYSGQVVVWDTRAKSLPVQRTPLSTAGHTYPVYNLHIGGTDNAPSLLTASTEGRVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEQKDLVVGSESGGIYTTPLHFRNSGAVEEYSGHYGLVTSVDANPSASKSLRG-----LVLSSSVDWTTRLWRLGKGSNTPIQSLTHGTYDYVCDAKWSPKHPALFVTANISGELGLWNLNHSMEEPFTPPVKVVVDRCALTRMAWSPDGRRLCVGDDKGYARIFNMDQETALPRPDEELRLEAAL 2141
L ED+++I+ + F +DF ++SR++ERALG + D+L+DY AA+EG+ G + + +E T +D+W Q R +T + SP PEL +ASY R +A TD DG VLVWS+ M RPEY + QS VLTA F F H++IGGTYSG +V+WDTRAK+ P+ RTPLS+ GH +PVY++ + GT NA +L++ ST+GR+ E L+ G+E G I +H G E + GH G +T VD +P + G L+LS+S DWT RLW K + + S + DYV DAKW P HPA+F + + G L +W+LN +E P V+V A+ + WSPDGRRL G +G ++N+D+E P+P++ RLE +
Sbjct: 221 LPDEDRQKILTSTDF--ADFFNKTSRLVERALGAQ--FDILVDYSGVAAEEGNDMEGVEKVKRHE--TYRDDKWTQGRCVTSVCNSPKFPELFMASYGQR--------ENAAPTDPDGCVLVWSLPMTQRPEYVFTCQSAVLTACFDKFQPHLVIGGTYSGSIVLWDTRAKAGPIHRTPLSSRGHAHPVYSMALVGTQNAHNLISVSTDGRLCVWSLGMLVHPQEFIDFKKGNRDVSVTCMAFEEG-ETNVLMAGAEDGSIVQAHIHGTKVGVTEAFEGHDGPITGVDYHPIGEAASHGADFSDLLLSTSFDWTIRLWS-PKHHSQCLHSF-EVSEDYVYDAKWHPHHPAVFASVDGEGNLDVWDLNKDLESPH---VRVNSGESAMNHLCWSPDGRRLVSGTSEGIIAVWNVDKELTTPKPEDWARLEEQI 632
BLAST of mRNA_P-littoralis_Contig192.31.2 vs. uniprot
Match: D3AZM5_POLPP (Cytoplasmic dynein intermediate chain n=1 Tax=Polysphondylium pallidum (strain ATCC 26659 / Pp 5 / PN500) TaxID=670386 RepID=D3AZM5_POLPP) HSP 1 Score: 279 bits (713), Expect = 2.340e-79 Identity = 165/422 (39.10%), Postives = 232/422 (54.98%), Query Frame = 3
Query: 882 DKKEIVQTDHFQASDFLRRSSRVLERALGEREALDVLLDYAADEGDGSRGDQGQRLNEAMTLHEDRWCQERALTDLQWSPHHPELVLASYSARGHGLDATSSSALHTDADGLVLVWSMAMQ-HRPEYQLSSQSPVLTAKFHPFDTHVIIGGTYSGQVVVWDTRAKSLPVQRTPLSTAGHTYPVYNLHIGGTDNAPSLLTASTEGRVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-------EQKDLVVGSESGGIYTTPLHFRNSGAVEEYSGHYGLVTSVDANPSA--SKSLRGLVLSSSVDWTTRLWRLGKGSNTPIQSLTHGTYDYVCDAKWSPKHPALFVTANISGELGLWNLNHSMEEPFTPPVKVVVDRCALTRMAWSPDGRRLCVGDDKGYARIFNMDQETALPRPDE 2117
DK I+++D F++ F R+S+V+ERAL +++D+L+DY + D + L TL ++RW + R++TD+ WSP HPELV+ SYSA G D DG+VLVW++ +PEY + QSPV+T F + +I+GGTYSGQ+VVWDTR+KS PVQRTPLS+ GHT+PVY++ + G+ NA SL++ ST+G++ E VG+E G IY H +G E + HYG VTS+D +P + S L LSSS DWT RLW K + PI S T DYV DA+WSP +P++F T + SG+L LW+LN E P + +L R++WS DGRRL VGD G +++ Q A P+ D+
Sbjct: 206 DKSNILESDSFKS--FFSRTSKVIERALCLDDSIDILVDYT--KSDEESKSSSKELTLIGTLQDERWSKHRSVTDINWSPKHPELVVTSYSANEAGSH---------DPDGVVLVWTVNNYFQKPEYVFNCQSPVMTTFFSRYHPTLIVGGTYSGQIVVWDTRSKSTPVQRTPLSSVGHTHPVYSMAVVGSANANSLVSISTDGKLCSWSLDNLSQPIETLDLNSRANTATVSTTTSIAVTSLVFPETEMNTFYVGTEEGVIYQAQAHGAKAGVNERFKAHYGPVTSIDFHPPSRNSSEFSNLFLSSSTDWTCRLWSSSK-PDQPIYSFEDYT-DYVFDARWSPVNPSIFATGDGSGQLALWDLNEETEAPI---FRAKTSSRSLNRLSWSADGRRLLVGDSGGQLSLYDSSQ-FASPQVDD 608
BLAST of mRNA_P-littoralis_Contig192.31.2 vs. uniprot
Match: A0A0D2WJ75_CAPO3 (Uncharacterized protein n=2 Tax=Capsaspora owczarzaki (strain ATCC 30864) TaxID=595528 RepID=A0A0D2WJ75_CAPO3) HSP 1 Score: 278 bits (710), Expect = 5.700e-79 Identity = 165/434 (38.02%), Postives = 243/434 (55.99%), Query Frame = 3
Query: 870 LSVEDKKEIVQTDHFQASDFLRRSSRVLERALGEREALDVLLDYAADEGDGSRGDQG--QRLNEAMTLHEDRWCQERALTDLQWSPHHPELVLASYSARGHGLDATSSSALHTDADGLVLVWSMAMQHRPEYQLSSQSPVLT---AKFHPFDTHVIIGGTYSGQVVVWDTRAKSLPVQRTPLSTAGHTYPVYNLHIGGTDNAPSLLTASTEGRVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEQKDLVVGSESGGIYTTPLHFRNSGAVEEYSGHYGLVTSVDANPSAS--KSLRGLVLSSSVDWTTRLWRLGKGSNTPIQSLTHGTYDYVCDAKWSPKHPALFVTANISGELGLWNLNHSMEEPFTPPVKVVVDR--CALTRMAWSPDGRRLCVGDDKGYARIFNMDQETALPRPDEELRLEAALA 2144
LS +D+ IV++D F F RSSR++ERAL + + DV +DY+ S D G +R++ ++RW RA+T +QWSP HPEL+ A G+G++ SS D DG+VL+W++ + RPE + QS V++ +KFHP ++I+GGTYSG +V+WDTRAK+ PVQRTPL++A HT+PVY L + GT NA +L++ ST+GR+ E +VG E G + H R +G +GH+G VT+V ++P+ + + L++SSS+DW+ +LW S TPI S + DY+ DA+WSP HPA+F T + + L LWNLN +E P V +D AL R+ WS DG ++ VGD G ++N+ ++ A PR DE L + LA
Sbjct: 197 LSEDDRSAIVKSDRF--LQFFDRSSRLVERALND--SYDVTVDYSGGAQTDSDSDAGASERVSINTKFVDERWSVHRAITSMQWSPKHPELL-----AVGYGINPASSQ----DPDGVVLLWNLHLPQRPELVFTCQSAVMSVCLSKFHP---NLIVGGTYSGSIVLWDTRAKTTPVQRTPLTSACHTHPVYCLEMVGTQNAHNLISVSTDGRMCAWSMDMFAQPQTKSEPRHERLPILAATALAFPEDEIAHFIVGGEDGTVGLGSRHGRQAGVHSTLAGHHGPVTAVHSHPTINNYRDFNDLIISSSMDWSVKLW--SSKSRTPIHSF-EASGDYIYDAQWSPVHPAVFATVDGASRLDLWNLNGDIE---VPAVSTTIDANGAALNRLRWSADGSKVAVGDADGTVHVYNIGEKFAQPRADETSILRSTLA 608
BLAST of mRNA_P-littoralis_Contig192.31.2 vs. uniprot
Match: A0A0G4HJL6_9ALVE (Uncharacterized protein n=1 Tax=Chromera velia CCMP2878 TaxID=1169474 RepID=A0A0G4HJL6_9ALVE) HSP 1 Score: 274 bits (700), Expect = 4.950e-77 Identity = 187/611 (30.61%), Postives = 293/611 (47.95%), Query Frame = 3
Query: 411 DRRVAERLSSLTVTCGLGSVDVLPKTIELYDKGCQTDLAGTAAHGGGEVEEDGGAVGAQPTSSVKKTSDKRRNHLRVFGRGGKGVPVPDGSDGEDLGYPPTVGPSLIAASSPSRPGSRTVVSTPGSRSGRGLADGSGGMA-ALPMTPPSSAAQPLSVEDKKEIVQTDHFQASDFLRRSSRVLERALGEREALDVLLDY--AADEGDGSRGDQGQRLNEAMTLHEDRWCQERALTDLQWSPHHPELVLASYSARGHGLDATSSSALHTDADGLVLVWSMAMQHRPEYQLSSQSPVLTAKFHPFDTHVIIGGTYSGQVVVWDTRAKSLPVQRTPLSTAGHTYPVYNLHIGGTDNAPSLLTASTEGRVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEQKDLVVGSESGGIYTTPLHFRNSGAVEEYSG-------------------------HYGLVTSVDANPSASKSLRG-----LVLSSSVDWTTRLWRLGKGSNTPIQSLTHGTYDYVCDAKWSPKHPALFVTANISGELGLWNLNHSMEEPFTPPVKVVVDRCALTRMAWSPDGRRLCVGDDKGYARIFNMDQETALPRPDEELRLEAALA 2144
D A++ + L LG V++ PK +E YDK Q +L GG EED G G TS ++ S ++ D E +P V S+ A T + T R+ A G G A T P +S +D K + + F SDF ++SR++ERALG+++ DV +DY A DE + G+ +R + + + +W + R + D++ SP +PEL LA+Y + + TD DG VL+WS+ + RPE+ SQS VL+A F+ F ++++GGTYSG +V+WDTRAK+ P+QRTPL+ GH++PVY L + G+ NA +L++ ST+GR+ E L G+E G ++ +H +G ++ G H G V+++D +P + G +LSSS DWT +LW K + P+ S + DYV D KW+P+HPALF + + G + +W++N ME P+ V+V AL ++ WS DGRR+ GD G ++ +D+E +P++ RL+ ++
Sbjct: 81 DAHAAKKSTKLKRATNLGEVNIPPKILEAYDKSVQVELDPPIYRGG--HEEDPGGHGH--TSMQRRASTITAQRVK---------------DKEKAAHPGGVHHSISAGQVKEH---ATHLDTDRERTEEQGAAGEGQEENAEEETEPQIRV--MSDDDFKTVSKQPEF--SDFFSKTSRLMERALGQQKFADVFVDYSGALDEDEDGEGESAERAQKVDSYFDPKWTETRPVMDVKSSPKYPELFLAAYGQK--------ENESVTDPDGCVLLWSLNLPSRPEFAFVSQSAVLSADFNKFQPNIVVGGTYSGSIVMWDTRAKAGPIQRTPLTARGHSHPVYALQLVGSQNAHNLVSISTDGRLCVWALGMLVQPQESLDFRRGANREVAATCLSLSEGETNILYTGAEDGNVFQAHIHGSKNGVTDQLEGIDTNPQTGLHRATAGHDPSLAKTPAHEGPVSALDFHPQGEAAQHGADFSDFLLSSSFDWTIKLWS-PKSFSKPLHSF-EASEDYVFDVKWNPQHPALFASVDGEGYVDVWDMNRDMESPY---VRVRDKELALNKVCWSSDGRRIVTGDHSGVVNVWGIDKELTTAKPEDFTRLDEKIS 652
BLAST of mRNA_P-littoralis_Contig192.31.2 vs. uniprot
Match: UPI000B8E9CE9 (cytoplasmic dynein 1 intermediate chain-like isoform X1 n=9 Tax=Zootermopsis nevadensis TaxID=136037 RepID=UPI000B8E9CE9) HSP 1 Score: 268 bits (686), Expect = 2.140e-76 Identity = 167/445 (37.53%), Postives = 234/445 (52.58%), Query Frame = 3
Query: 849 PSSAAQPLSVEDKKEIVQTDHFQASDFLRRSSRVLERALGEREALDVLLDYAADEGDGSRG---DQGQRLNEAMTLHEDRWCQERALTDLQWSPHHPELVLASYSARGHGLDATSSSALHTDADGLVLVWSMAMQHR-PEYQLSSQSPVLTAKFHPFDTHVIIGGTYSGQVVVWDTRA-KSLPVQRTPLSTAGHTYPVYNLHIGGTDNAPSLLTASTEGRVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEQKDLVVGSESGGIYTTPLHFRNSGAVEEYSGHYGLVTSVDANP-SASKSLRGLVLSSSVDWTTRLWRLGKGSNTPIQSLTHGTYDYVCDAKWSPKHPALFVTANISGELGLWNLNHSMEEPFTPPVKVVVDRCALTRMAWSPDGRRLCVGDDKGYARIFNMDQETALPRPDEELRLEAALA-VKGNGA 2162
P+ + LS E+K+ I+ T+ FQ FL R+ RV+ERAL E ++D+ DY GDG G RL+ ++DRW + R +T L WSP +PEL++ASY H + + + D DG+ L+W+ + PEY QSPVL A F F ++I+GGTYSGQ+V+WD R K PVQRTPLSTA HT+PVY L + GT NA +L++ ST+GR+ + + +VGSE G +YT H G E Y GH G VT + A+ L L+SS DWT +LW + + N P+ S DYV D WSP HPALF T + +G L LW+LN E P +V AL R++W+P G + VGDD G ++++ ++ + PR D+ + L +K N A
Sbjct: 104 PAKQVRELSEEEKQMIILTEDFQR--FLDRAGRVMERALSE--SVDIYTDYTG-VGDGDEAADEKSGLRLSLNRCFYDDRWSRNRCVTSLDWSPQYPELLVASY----HNNEDSPN-----DPDGVCLIWNTKFKKTTPEYIFHCQSPVLAATFARFHPNLILGGTYSGQIVLWDNRVQKRTPVQRTPLSTAAHTHPVYCLSVVGTQNAHNLISVSTDGRLCSWSLDMLSQPQETLELQHKQGKPIAVTCLAFPHSDVNNFIVGSEEGSVYTACRHGSKVGVTETYEGHQGPVTGISAHSVQGGIDFSHLFLTSSFDWTVKLWSVKE--NRPLYSFEDNG-DYVYDVAWSPVHPALFATVDGTGRLDLWDLNQDTEVPTA--TALVEGSPALNRVSWTPSGLHVTVGDDMGKIWVYDVGEQLSQPRLDDWSKFVYTLQELKNNKA 529 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig192.31.2 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig192.31.2 >prot_P-littoralis_Contig192.31.2 ID=prot_P-littoralis_Contig192.31.2|Name=mRNA_P-littoralis_Contig192.31.2|organism=Pylaiella littoralis U1_48|type=polypeptide|length=703bp MADAEAVRQQRQKQLEDKRRRVNALRKRKKEKETATKIASDAAATPQQQAback to top mRNA from alignment at P-littoralis_Contig192:175609..190104- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig192.31.2 ID=mRNA_P-littoralis_Contig192.31.2|Name=mRNA_P-littoralis_Contig192.31.2|organism=Pylaiella littoralis U1_48|type=mRNA|length=14496bp|location=Sequence derived from alignment at P-littoralis_Contig192:175609..190104- (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig192:175609..190104- >mRNA_P-littoralis_Contig192.31.2 ID=mRNA_P-littoralis_Contig192.31.2|Name=mRNA_P-littoralis_Contig192.31.2|organism=Pylaiella littoralis U1_48|type=CDS|length=2109bp|location=Sequence derived from alignment at P-littoralis_Contig192:175609..190104- (Pylaiella littoralis U1_48)back to top |