prot_P-littoralis_Contig192.24.1 (polypeptide) Pylaiella littoralis U1_48

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-littoralis_Contig192.24.1
Unique Nameprot_P-littoralis_Contig192.24.1
Typepolypeptide
OrganismPylaiella littoralis U1_48 (Pylaiella littoralis U1_48 (Mung))
Sequence length444
Homology
BLAST of mRNA_P-littoralis_Contig192.24.1 vs. uniprot
Match: A0A6H5KCC9_9PHAE (PSII_BNR domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KCC9_9PHAE)

HSP 1 Score: 731 bits (1887), Expect = 3.490e-264
Identity = 369/419 (88.07%), Postives = 386/419 (92.12%), Query Frame = 0
Query:   25 MAALKSGCAILVALSGVRAFVPQGLKTAIPHSAAPGFRQQEHTSSPLCSRPMRMSLDDLSESRQDFLKGSGVGLVAGVVAVGASTGASPPAEAATVSAWEQIQLPVASVLYDIAFDPEHPDHGLIVGAQGTFLETFDGGNKWSVRTFGNLDEEEEINYRFQKVSMFNDEIFIVGKPPILLHSKDSGKSWERVPLSPKLPGEPSNIVALGGAKAEMTTSSGAIYYTKNAGMNWSAQVKETVDATLNRISSSGVSGASYFTGSIIGTTRAEDGSYLAVSSRGNFYLTWAPGQDFWIPHNRGTSRRIQNMGFVRDRASEGLWMTLNGGAMQMSTTLPQGTSDPVFTDTAIKSGGYGIIDVAWKNDNEAWAVGGGGSLWYSTDGGQTFKFSSGATNIGANLYDVKFFGGDKGFAIGSDGVLLK 443
            M A KSGCA+L AL+GV AFVP GL          GF   EHTS+   SRPMRMSLDD+SESR  FLK S +GL  G VAVGASTGA P AEAATVSAWEQIQLPVASVLYDIAFDPEHPDHGL+VGAQGTFLETFDGG KWSVRTFGNLDEEEEINYRFQKVSM+NDEIFI+GKPPILLHSKD+GK+WERVPLSPKLPGEPSNIVALGGAKAEMTTSSGAIYYTKNAGMNWSAQVKETVDATLNRISSSGVSGASYFTGSIIGTTRAEDGSYLAVSSRGNFYLTW+PGQDFWIPHNRGTSRRIQNMGFVR RA+EGLWMTLNGGAMQMS TLP+GT+DPVF++TAIKSGGYGIIDVAWKNDNEAWAVGGGGSLWYSTDGG+TFKFSSGATNIGANLYDVKFFGGDKGFAIGSDGVLLK
Sbjct:    1 MTASKSGCALLAALAGVSAFVPHGLTKTAQQQVKGGFGH-EHTSA-ASSRPMRMSLDDVSESRGGFLKDSALGLAVGAVAVGASTGAPPAAEAATVSAWEQIQLPVASVLYDIAFDPEHPDHGLVVGAQGTFLETFDGGYKWSVRTFGNLDEEEEINYRFQKVSMYNDEIFIIGKPPILLHSKDAGKTWERVPLSPKLPGEPSNIVALGGAKAEMTTSSGAIYYTKNAGMNWSAQVKETVDATLNRISSSGVSGASYFTGSIIGTTRAEDGSYLAVSSRGNFYLTWSPGQDFWIPHNRGTSRRIQNMGFVRGRAAEGLWMTLNGGAMQMSKTLPEGTNDPVFSETAIKSGGYGIIDVAWKNDNEAWAVGGGGSLWYSTDGGETFKFSSGATNIGANLYDVKFFGGDKGFAIGSDGVLLK 417          
BLAST of mRNA_P-littoralis_Contig192.24.1 vs. uniprot
Match: A0A836CNS8_9STRA (Photosynthesis system II assembly factor YCF48-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CNS8_9STRA)

HSP 1 Score: 494 bits (1272), Expect = 1.060e-170
Identity = 254/369 (68.83%), Postives = 285/369 (77.24%), Query Frame = 0
Query:   82 DLSESRQDFLKGSGVGLVAGVVAVGASTGASPP--AEAATVS--AWEQIQLPVASVLYDIAFDPEHPDHGLIVGAQGTFLETFDGGNKWSVRTFGNLDEEEEINYRFQKVSMFNDEIFIVGKPPILLHSKDSGKSWERVPLSPKLPGEPSNIVALGGAKAEMTTSSGAIYYTKNAGMNWSAQVKETVDATLNRISSSGVSGASYFTGSIIGTTRAEDGSYLAVSSRGNFYLTWAPGQDFWIPHNRGTSRRIQNMGFVRDRASEGLWMTLNGGAMQMSTT---LPQGTSDPVFTDTAIKSGGYGIIDVAWKNDNEAWAVGGGGSLWYSTDGGQTFKFSSGATNIGANLYDVKFFGGDKGFAIGSDGVLLK 443
            D  ESR+DF K S   LV G  AV    G + P  AEAA V   AWEQI LPVA+ LYDIAFD     HG +VGA+GTFLET DGG  W  RTFGNLD EEEINYRF+KVS  + E FI+GKPPILLH+KD G+SWERVPLSPKLPGEPSNIVALG  KAEMTTS+GA+YYT NAG+NW AQVKET+DATLNRISSSGVSGASYFTGSIIGT R + G+YLAVSSRGNFYLTW PGQDFWIPHNRGTSRRIQNMGFV    ++G+WMTLNGG MQ+S +   L   T DP F    IK+GGYGIID AWK+  EAWAVGGGG+LW S DGG+T+K+   A  I  NLY +KFF  + GF +GSDGVLL+
Sbjct:   47 DTVESRRDFFKSSSA-LVGGAAAVAGLAGVTAPSAAEAAPVKVKAWEQIALPVATTLYDIAFDTADTQHGFVVGAKGTFLETRDGGKTWDPRTFGNLDAEEEINYRFEKVSFVDGEAFIIGKPPILLHTKDKGESWERVPLSPKLPGEPSNIVALGSGKAEMTTSTGAVYYTNNAGLNWKAQVKETIDATLNRISSSGVSGASYFTGSIIGTLRDKSGAYLAVSSRGNFYLTWQPGQDFWIPHNRGTSRRIQNMGFVEGDINKGVWMTLNGGVMQISKSGDSLSVAT-DPTFEPVDIKTGGYGIIDAAWKDAKEAWAVGGGGNLWVSMDGGKTYKYDKVADKIPGNLYTIKFFSPESGFVLGSDGVLLR 413          
BLAST of mRNA_P-littoralis_Contig192.24.1 vs. uniprot
Match: A0A7S2XVG6_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XVG6_9STRA)

HSP 1 Score: 457 bits (1176), Expect = 3.600e-156
Identity = 238/397 (59.95%), Postives = 287/397 (72.29%), Query Frame = 0
Query:   51 TAIPHSAAPGFRQQEHTSSPLCSRPMRMSLDDLSES--RQDFLKGSGVGLVAGVVAVGASTGASP-PAEAATVSAWEQIQLPVASVLYDIAFDPEHPDHGLIVGAQGTFLETFDGGNKWSVRTFGNLDEEEEINYRFQKVSMFNDEIFIVGKPPILLHSKDSGKSWERVPLSPKLPGEPSNIVALGGAKAEMTTSSGAIYYTKNAGMNWSAQVKETVDATLNRISSSGVSGASYFTGSIIGTTRAEDGSYLAVSSRGNFYLTWAPGQDFWIPHNRGTSRRIQNMGFVRDRASEGLWMTLNGGAMQMSTTLPQ-GTSDPVFTDTAIKSGGYGIIDVAWKNDNEAWAVGGGGSLWYSTDGGQTFKFSSGATNIGANLYDVKFFGGDKGFAIGSDGVLLK 443
            T IP  +  G R          +RP+RM+ +  + S  R++FL  S     A V   GA+  A P  A AA   AW  ++LP ++ L+D+ FD + P+HG +VG++GTFLETFD G  W VRTF  LD EEEI YRF+KVS  + E +I+GKP ILLHSKD G++WER+PLSPKLPGEP +IVA G   AEMTTS+GAIYYT NA  N+ AQVKET+DATLNRISSSGVSGASYFTGSIIGT R   G+YLAVSSRGNFYLTW PG DFWIPHNRGTSRRIQ MGFV+D  S+GLWMTLNGG +Q+S T      SD  F    IK+GGYGI DVAWK++NE WAVGGGG+++ S DGG+ F F++ A +I  NLY+VKFF   KGF +GSDG+LLK
Sbjct:   28 TNIPSPSIAGVRS--------IARPLRMTAEQAAGSADRREFLVNS-----AKVATAGAAISALPGSASAARSQAWTAVELPASTTLFDLDFDTKDPNHGFLVGSKGTFLETFDAGETWGVRTFSQLDAEEEITYRFEKVSFLDGEAWIIGKPSILLHSKDEGRNWERIPLSPKLPGEPCDIVATGAETAEMTTSAGAIYYTSNAARNFKAQVKETIDATLNRISSSGVSGASYFTGSIIGTIRDSTGAYLAVSSRGNFYLTWQPGDDFWIPHNRGTSRRIQQMGFVQDDLSKGLWMTLNGGVLQISKTGQDVSNSDVEFKAANIKTGGYGITDVAWKDENEVWAVGGGGTMFVSVDGGKNFVFNNAADDIPGNLYNVKFFKNGKGFVLGSDGILLK 411          
BLAST of mRNA_P-littoralis_Contig192.24.1 vs. uniprot
Match: A0A7S3XNC3_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XNC3_HETAK)

HSP 1 Score: 457 bits (1175), Expect = 1.170e-155
Identity = 231/388 (59.54%), Postives = 286/388 (73.71%), Query Frame = 0
Query:   60 GFRQQEHTSSPLCSRPMRMSLDDLSESRQDFLKGSGVGLVAGVVAVGASTGASPPAEAATVS--AWEQIQLPVASVLYDIAFDPEHPDHGLIVGAQGTFLETFDGGNKWSVRTFGNLDEEEEINYRFQKVSMFNDEIFIVGKPPILLHSKDSGKSWERVPLSPKLPGEPSNIVALGGAKAEMTTSSGAIYYTKNAGMNWSAQVKETVDATLNRISSSGVSGASYFTGSIIGTTRAEDGSYLAVSSRGNFYLTWAPGQDFWIPHNRGTSRRIQNMGFVRDRASEGLWMTLNGGAMQMSTTLPQ--GTSDPVFTDTAIKSGGYGIIDVAWKNDNEAWAVGGGGSLWYSTDGGQTFKFSSGATNIGANLYDVKFFGGDKGFAIGSDGVLLK 443
            GF Q    ++   S  + M+  D+S  R +F+  S    V G VA  AS   +P   AAT    AWE+++LP  + L+DI FD ++PDHG +VGA+GTFLETF+GG  W VRTF NLDE+EEINYRF+KVS  + E +I+GKPPILLH++D GKSWER+PLSPKLPGEPS I+A G  +AEMTTS+GAIYYT N   NW AQ+KET+DATLNR+SSSGVSGAS+F+G+I    R  +G+YLAVSSRGNFYLTW PGQDFWIPHNRGT RRIQNMGF++D    G+WM+LNGG +Q++    +  G +D  F D  IKSGGYGI+D  WK++ E WAVGGGG+++YS DGG  FKF S A  I  NLY  KFFG +KGF +GSDGVLL+
Sbjct:   55 GFTQSGRIAASRASSQLNMAEGDIS--RSEFITKSAA--VGGTVA--ASGLWTPSVFAATEKRKAWEKVELPSGATLFDIDFDTKNPDHGFLVGAKGTFLETFNGGKSWGVRTFSNLDEDEEINYRFEKVSFLDGEAWIIGKPPILLHTRDDGKSWERIPLSPKLPGEPSGIIATGNEQAEMTTSTGAIYYTGNQARNWKAQLKETIDATLNRVSSSGVSGASFFSGTINDCKRDVNGNYLAVSSRGNFYLTWVPGQDFWIPHNRGTPRRIQNMGFIQDDIKNGVWMSLNGGLLQLTEPGQEINGINDAKFKDAKIKSGGYGILDCTWKDEKEVWAVGGGGTMYYSRDGGNEFKFDSSADKIPGNLYTCKFFGPNKGFVLGSDGVLLR 436          
BLAST of mRNA_P-littoralis_Contig192.24.1 vs. uniprot
Match: A0A7S2S971_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2S971_9STRA)

HSP 1 Score: 440 bits (1131), Expect = 9.240e-149
Identity = 215/322 (66.77%), Postives = 254/322 (78.88%), Query Frame = 0
Query:  123 WEQIQLPVASVLYDIAFDPEHPDHGLIVGAQGTFLETFDGGNKWSVRTFGNLDEEEEINYRFQKVSMFNDEIFIVGKPPILLHSKDSGKSWERVPLSPKLPGEPSNIVALGGAKAEMTTSSGAIYYTKNAGMNWSAQVKETVDATLNRISSSGVSGASYFTGSIIGTTRAEDGSYLAVSSRGNFYLTWAPGQDFWIPHNRGTSRRIQNMGFVRDRASEGLWMTLNGGAMQMST-TLPQGTSDPVFTDTAIKSGGYGIIDVAWKNDNEAWAVGGGGSLWYSTDGGQTFKFSSGATNIGANLYDVKFFGGDKGFAIGSDGVLLK 443
            W Q+   V + L+DIAFD   P HG +VGA+GTFLET DGG  W  R+F NLD E+EINYRFQ VS  N+E +I+GKP ILLHSKD+GK+WERVPLSPKLPGEP+ IVALG  KAEMTTS+GAIYYT+NAG NW AQVKET+DATLNR+SSSGVSGASYFTGSI    R   GSYLAVSSRGNFYLT+ PG +FWIPHNRGTSRRIQ+MGF  ++  EGLWM+LNGG +++S       + +P F  ++IK+GGYGIIDVAW+N NE WAVGGGG++  S DGG+TFKF + A +I  NLY VKFF  D GF +GSDGVLL+
Sbjct:  133 WTQVDAGVDTTLFDIAFDTADPSHGYVVGARGTFLETVDGGKSWFPRSFTNLDAEDEINYRFQTVSFENNEAWIIGKPAILLHSKDAGKNWERVPLSPKLPGEPNGIVALGPGKAEMTTSTGAIYYTENAGRNWKAQVKETIDATLNRVSSSGVSGASYFTGSISSIERDSSGSYLAVSSRGNFYLTYRPGDEFWIPHNRGTSRRIQSMGFANEKLEEGLWMSLNGGLLEVSNKNTDLNSQEPEFDPSSIKTGGYGIIDVAWRNKNEVWAVGGGGTMHVSKDGGKTFKFDNSADDIPGNLYSVKFFK-DTGFVLGSDGVLLR 453          
BLAST of mRNA_P-littoralis_Contig192.24.1 vs. uniprot
Match: A0A7R9U3Z4_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9U3Z4_9STRA)

HSP 1 Score: 432 bits (1111), Expect = 1.520e-146
Identity = 209/333 (62.76%), Postives = 249/333 (74.77%), Query Frame = 0
Query:  113 PPAEAATVSAWEQIQLPVASVLYDIAFDPEHPDHGLIVGAQGTFLETFDGGNKWSVRTFGNLDEEEEINYRFQKVSMFNDEIFIVGKPPILLHSKDSGKSWERVPLSPKLPGEPSNIVALGGAKAEMTTSSGAIYYTKNAGMNWSAQVKETVDATLNRISSSGVSGASYFTGSIIGTTRAEDGSYLAVSSRGNFYLTWAPGQDFWIPHNRGTSRRIQNMGFVRDRASEGLWMTLNGGAMQMSTTLPQGTSDPV--FTDTAIKSGGYGIIDVAWKNDNEAWAVGGGGSLWYSTDGGQTFKFSSGATNIGANLYDVKFFGGDKGFAIGSDGVLLK 443
            P A  A  + W ++ +     LYDI+FDP  P HG++VGA+G+F E+FDGG  W  R+F  LD +EEI YRF++VS+   E +I+GKP ILLH+KDSGKSWERVPLSPKLPGEPS I+ LG   AEMTTS+GAIYYT N G+NW AQVKET+DATLNRISSSGV GASYF+GSI  T R + G YLAVSSRGNFYLTW PGQDFWIPHNRGTSRRIQNMGF++     G+WM+LNGG +Q++ T P   S  +  F    + SGGYGIID+AWKND E WAVGG GS++ S DGG +F F   A  I  NLY V FFG D+GF +GSDGVLL+
Sbjct:   66 PEASEAGDAFWRRVDVGTTETLYDISFDPSDPKHGMLVGAKGSFFESFDGGKSWQPRSFSALDPDEEITYRFEQVSLNGGEAYIIGKPAILLHTKDSGKSWERVPLSPKLPGEPSTIIGLGSGNAEMTTSTGAIYYTTNGGLNWKAQVKETIDATLNRISSSGVKGASYFSGSIALTHRDDQGKYLAVSSRGNFYLTWEPGQDFWIPHNRGTSRRIQNMGFIKGIQDNGVWMSLNGGEVQLTATAPDMASTDLIDFKKVNLNSGGYGIIDLAWKNDREVWAVGGSGSIFVSRDGGGSFSFDKSADKIPGNLYSVSFFG-DQGFVLGSDGVLLR 397          
BLAST of mRNA_P-littoralis_Contig192.24.1 vs. uniprot
Match: A0A7S2UBA7_9STRA (Hypothetical protein n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2UBA7_9STRA)

HSP 1 Score: 427 bits (1098), Expect = 1.630e-144
Identity = 220/379 (58.05%), Postives = 274/379 (72.30%), Query Frame = 0
Query:   72 CSRPMRMSL---DDLSESRQDFLKGSG-VGLVAGVVAVGASTGASPPAEAATVSAWEQIQLPVASVLYDIAFDPEHPDHGLIVGAQGTFLETFDGGNKWSVRTFGNLDEEEEINYRFQKVSMFNDEIFIVGKPPILLHSKDSGKSWERVPLSPKLPGEPSNIVALGGAKAEMTTSSGAIYYTKNAGMNWSAQVKETVDATLNRISSSGVSGASYFTGSIIGTTRAEDGSYLAVSSRGNFYLTWAPGQDFWIPHNRGTSRRIQNMGFVRDRASEGLWMTLNGGAMQMSTT-LPQGTSDPVFTDTAIKSGGYGIIDVAWKNDNEAWAVGGGGSLWYSTDGGQTFKFSSGATNIGANLYDVKFFG--GDKGFAIGSDGVLLK 443
            CS    +S+   D  SE R+ F+  +G    +A +  V  S G   PAEAA    W+QIQLP    LYD+ FD   P HG +VGA+G F ET DGGN W  R+F NLD EEE+ YRFQ VS  + E +++GKP ++LH+KDSGK+WER+PLSPKLPGEP++I+A G  KAEMTTSSGA+Y T+NAG NW AQVKET+DATLNRISSSGVSGASYF+GSII   R ++G+YLAVSSRGNF+LTW PGQDFWIPHNRG SRRIQ+MGFV     +GLWMTLNGG + ++   +     D  F +  IK+GGYGI DVAW+N +E WAVGG  +++ S DGG++FKF   A NI  NLY+VKFF    + G+A+GS+G+LLK
Sbjct:   28 CSSTSTLSMSAADSGSEGRRTFVTKTGSAAAMASLATVTGSAGLPQPAEAAASKMWKQIQLPFEDTLYDVDFDS--PTHGYLVGARGAFAETNDGGNTWEARSFSNLDAEEEVTYRFQVVSFQDGEGWVLGKPTLMLHTKDSGKTWERIPLSPKLPGEPTSILAKGPGKAEMTTSSGAVYVTENAGRNWKAQVKETIDATLNRISSSGVSGASYFSGSIINQVRDDEGAYLAVSSRGNFFLTWEPGQDFWIPHNRGQSRRIQSMGFVEGDIHKGLWMTLNGGKLLVANKDIDLKKDDFPFVEADIKTGGYGITDVAWRNTDEVWAVGGSNTMYVSFDGGKSFKFDKSANNIPGNLYNVKFFKQFSNAGWAVGSNGLLLK 404          
BLAST of mRNA_P-littoralis_Contig192.24.1 vs. uniprot
Match: A0A7S2SCF7_9STRA (Hypothetical protein n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2SCF7_9STRA)

HSP 1 Score: 423 bits (1087), Expect = 6.360e-143
Identity = 230/422 (54.50%), Postives = 285/422 (67.54%), Query Frame = 0
Query:   25 MAALKSGCAILVALSGVRAFVPQGLKTAIPHSAAPGFRQQEHTSSPLCSRPMRMSLDDLSESRQDFLKGSGVGLVAGVVAVGASTGASPPAEAATVSAWEQIQLPVASVLYDIAFDPEHPDHGLIVGAQGTFLETFDGGNKWSVRTFGNLDEEEEINYRFQKVSMFNDEIFIVGKPPILLHSKDSGKSWERVPLSPKLPGEPSNIVALGGAKAEMTTSSGAIYYTKNAGMNWSAQVKETVDATLNRISSSGVSGASYFTGSIIGTTRAEDGSYLAVSSRGNFYLTWAPGQDFWIPHNRGTSRRIQNMGFVRDRASEGLWMTLNGGAMQMSTTLPQGTSDPV-FTDTAIKSGGYGIIDVAWKNDNEAWAVGGGGSLWYSTDGGQTFKFSSGATNIGANLYDVKFFG--GDKGFAIGSDGVLLK 443
            M  L S  A+L+A S   AFVP   +                  S  C+  + M+ D + E R+ F+ G      A +     + G + PAEAA    W + ++P    +YDI FD   P HG +VGA+G+  ET DGG  W  R+F NLD EEEI YRFQ VS  + E +++GKP +LLH+KDSGKSWER+PLSPKLPGEPS+I+ALG +KAEMTTSSGA+Y T NAG NW AQVKET+DATLNRISSSGVSGASYFTGSII   R +DG+YLAVSSRGNF+LTW PGQDFWIPHNRGTSRRIQNMGFV     +GLWMTLNGG + +S   P  + D   F +  IK+GGYG+ DVAW+N+NEAWAVGG  +++ S DGG+ F F   A N   NLY V+FF    + G+A+GS+G+LL+
Sbjct:    1 MKLLFSSAALLLAASATNAFVPASCR------------------SKTCTN-LFMAADGV-EDRRAFV-GKTASATAALSIASVTGGVAAPAEAAASKMWTKSKVPFEETVYDIDFDS--PTHGYVVGARGSLAETNDGGLTWEPRSFSNLDAEEEITYRFQVVSFKDGEGWVLGKPALLLHTKDSGKSWERIPLSPKLPGEPSSILALGPSKAEMTTSSGAVYVTDNAGRNWKAQVKETIDATLNRISSSGVSGASYFTGSIINQVRDDDGAYLAVSSRGNFFLTWEPGQDFWIPHNRGTSRRIQNMGFVEGDIHKGLWMTLNGGKVFVSPKDPDLSQDAFEFFEADIKTGGYGVTDVAWRNENEAWAVGGSNTMYVSMDGGKKFNFDKSANNFPGNLYSVRFFKEYNNMGWALGSNGMLLR 399          
BLAST of mRNA_P-littoralis_Contig192.24.1 vs. uniprot
Match: A0A7S1FY02_9STRA (Hypothetical protein n=2 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1FY02_9STRA)

HSP 1 Score: 417 bits (1072), Expect = 1.000e-140
Identity = 216/369 (58.54%), Postives = 268/369 (72.63%), Query Frame = 0
Query:   79 SLDDLSESRQDFLKGSGVGLVAGVVAVGASTGASP-PAEAATVSAWEQIQLPVASVLYDIAFDPEHPDHGLIVGAQGTFLETFDGGNKWSVRTFGNLDEEEEINYRFQKVSMFNDEIFIVGKPPILLHSKDSGKSWERVPLSPKLPGEPSNIVALGGAKAEMTTSSGAIYYTKNAGMNWSAQVKETVDATLNRISSSGVSGASYFTGSIIGTTRAEDGSYLAVSSRGNFYLTWAPGQDFWIPHNRGTSRRIQNMGFVRDRASEGLWMTLNGGAMQMSTTLPQGTSDPV-FTDTAIKSGGYGIIDVAWKNDNEAWAVGGGGSLWYSTDGGQTFKFSSGATNIGANLYDVKFFG--GDKGFAIGSDGVLLK 443
            SL  ++ +R+ F+  S     A   AV A+  + P PA AA+   W  I++P A  LYDI FD   P HG +VGA+GTF ET DGGN W  R+F NLD EEE+ YRFQ+VS  + E +++GKP +LLH+KD+GKSWER+PLSPKLPG+P+ I+ALG  +AEMTT+SGAIY T+NAG NW AQVKET+DATLNR+SSSGVSGASYFTG+I+  TR   GSYLAVSSRGNF+LTW  G DFWIPHNRGT RRIQ MGFV D   +GLWMTLNGG + +S  L     D   FT+  IK+GGYGI DVAW+ D+E WAVGG  +++ S D G+ F F S A  I  NLY++KFF   G+ G+A+GS+G+LLK
Sbjct:   33 SLVQMANNRRTFVTES-----ASTAAVVATASSFPLPASAASTKMWTPIEVPFADTLYDIDFDS--PTHGYLVGARGTFAETNDGGNTWEPRSFSNLDAEEEVTYRFQQVSFVDGEGWVLGKPTLLLHTKDAGKSWERIPLSPKLPGDPAKILALGPNRAEMTTTSGAIYITENAGRNWKAQVKETIDATLNRVSSSGVSGASYFTGNILQPTRDSSGSYLAVSSRGNFFLTWEKGGDFWIPHNRGTPRRIQAMGFVGDSIKKGLWMTLNGGKLLVSPPLDAVNEDEYGFTEANIKTGGYGITDVAWRTDDEVWAVGGSNTMYRSVDNGKNFAFDSSANKIPGNLYNLKFFKEFGNMGWALGSNGILLK 394          
BLAST of mRNA_P-littoralis_Contig192.24.1 vs. uniprot
Match: A0A7S4WJL8_9STRA (Hypothetical protein n=4 Tax=Lithodesmiaceae TaxID=49247 RepID=A0A7S4WJL8_9STRA)

HSP 1 Score: 414 bits (1063), Expect = 8.050e-139
Identity = 205/330 (62.12%), Postives = 248/330 (75.15%), Query Frame = 0
Query:  117 AATVSAWEQIQLPVASVLYDIAFDPEHPDHGLIVGAQGTFLETFDGGNKWSVRTFGNLDEEEEINYRFQKVSMFNDEIFIVGKPPILLHSKDSGKSWERVPLSPKLPGEPSNIVALGGAKAEMTTSSGAIYYTKNAGMNWSAQVKETVDATLNRISSSGVSGASYFTGSIIGTTRAEDGSYLAVSSRGNFYLTWAPGQDFWIPHNRGTSRRIQNMGFVRDRASEGLWMTLNGGAMQMSTTLPQGTSDPV-FTDTAIKSGGYGIIDVAWKNDNEAWAVGGGGSLWYSTDGGQTFKFSSGATNIGANLYDVKFFG--GDKGFAIGSDGVLLK 443
            AA    W Q+ LP    LYDI FD   P HG +VGA+G F ET DGG  W  R+F NLD EEE+ YRFQ VS  + E +++GKP ++LH+KD+GK+WER+PLSPKLPGEP++++ALG +KAEMTTSSGA+Y T NAG NW AQVKET+DATLNRISSSGVSGASYFTGSII   R +DG+YLAVSSRGNF+LTW PGQDFWIPHNRGT RRIQNMGFV     +GLWMTLNGG + +S T P  +SD   F +  IK+GGYGI DVAW+  NE WAVGG  +++ STD G+ F F   A +I  NLY+VKFF    + G+A+GS G+LL+
Sbjct:  104 AAASKMWTQVSLPFEDTLYDIDFDS--PTHGYLVGARGAFAETNDGGQTWEARSFSNLDAEEEVTYRFQVVSFKDGEGWVLGKPTLMLHTKDAGKTWERIPLSPKLPGEPTSVLALGPSKAEMTTSSGAVYVTDNAGRNWKAQVKETIDATLNRISSSGVSGASYFTGSIINQVRDDDGAYLAVSSRGNFFLTWEPGQDFWIPHNRGTPRRIQNMGFVEGDIHKGLWMTLNGGKLFVSPTDPNLSSDSFEFNEANIKTGGYGITDVAWRTANEVWAVGGSNTMYVSTDNGKNFSFDKSANSIPGNLYNVKFFKEYDNMGWALGSSGLLLR 431          
The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig192.24.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KCC9_9PHAE3.490e-26488.07PSII_BNR domain-containing protein n=2 Tax=Ectocar... [more]
A0A836CNS8_9STRA1.060e-17068.83Photosynthesis system II assembly factor YCF48-dom... [more]
A0A7S2XVG6_9STRA3.600e-15659.95Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A7S3XNC3_HETAK1.170e-15559.54Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A7S2S971_9STRA9.240e-14966.77Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A7R9U3Z4_9STRA1.520e-14662.76Hypothetical protein n=1 Tax=Pinguiococcus pyrenoi... [more]
A0A7S2UBA7_9STRA1.630e-14458.05Hypothetical protein n=1 Tax=Attheya septentrional... [more]
A0A7S2SCF7_9STRA6.360e-14354.50Hypothetical protein n=1 Tax=Eucampia antarctica T... [more]
A0A7S1FY02_9STRA1.000e-14058.54Hypothetical protein n=2 Tax=Corethron hystrix Tax... [more]
A0A7S4WJL8_9STRA8.050e-13962.12Hypothetical protein n=4 Tax=Lithodesmiaceae TaxID... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR028203Photosynthesis system II assembly factor Ycf48/Hcf136-like domainPFAMPF14870PSII_BNRcoord: 116..443
e-value: 4.5E-124
score: 413.7
IPR015943WD40/YVTN repeat-like-containing domain superfamilyGENE3D2.130.10.10coord: 118..426
e-value: 2.4E-10
score: 41.8
NoneNo IPR availablePANTHERPTHR47199PHOTOSYSTEM II STABILITY/ASSEMBLY FACTOR HCF136, CHLOROPLASTICcoord: 84..443
NoneNo IPR availableSUPERFAMILY110296Oligoxyloglucan reducing end-specific cellobiohydrolasecoord: 122..441

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-littoralis_Contig192contigP-littoralis_Contig192:100400..115076 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Pylaiella littoralis U1_48 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-littoralis_Contig192.24.1mRNA_P-littoralis_Contig192.24.1Pylaiella littoralis U1_48mRNAP-littoralis_Contig192 100400..115076 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-littoralis_Contig192.24.1 ID=prot_P-littoralis_Contig192.24.1|Name=mRNA_P-littoralis_Contig192.24.1|organism=Pylaiella littoralis U1_48|type=polypeptide|length=444bp
RPGQVKIKRGREQHPRRYQVQRGAMAALKSGCAILVALSGVRAFVPQGLK
TAIPHSAAPGFRQQEHTSSPLCSRPMRMSLDDLSESRQDFLKGSGVGLVA
GVVAVGASTGASPPAEAATVSAWEQIQLPVASVLYDIAFDPEHPDHGLIV
GAQGTFLETFDGGNKWSVRTFGNLDEEEEINYRFQKVSMFNDEIFIVGKP
PILLHSKDSGKSWERVPLSPKLPGEPSNIVALGGAKAEMTTSSGAIYYTK
NAGMNWSAQVKETVDATLNRISSSGVSGASYFTGSIIGTTRAEDGSYLAV
SSRGNFYLTWAPGQDFWIPHNRGTSRRIQNMGFVRDRASEGLWMTLNGGA
MQMSTTLPQGTSDPVFTDTAIKSGGYGIIDVAWKNDNEAWAVGGGGSLWY
STDGGQTFKFSSGATNIGANLYDVKFFGGDKGFAIGSDGVLLK*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR028203PSII_CF48-like_dom
IPR015943WD40/YVTN_repeat-like_dom_sf