mRNA_P-littoralis_Contig191.119.2 (mRNA) Pylaiella littoralis U1_48
|
Overview
Homology
BLAST of mRNA_P-littoralis_Contig191.119.2 vs. uniprot
Match: D7G7Y8_ECTSI (DNA primase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G7Y8_ECTSI) HSP 1 Score: 821 bits (2121), Expect = 2.520e-293 Identity = 408/477 (85.53%), Postives = 436/477 (91.40%), Query Frame = 2
Query: 299 MEVDK-ENVGSAGASGAESKAAPVRSKGVSADDNREAFSPDLLRIYYARLFPYEQMYRWLGYSNMPASLPDTEGIPQAVEEQADFFSKREFSFTIEDDVYIRYQCFADQKEFEQQVQKKQPHKIDIGAVFTLPPKARNHLAVKPGAFQPVERELVFDIDLTDYDDVRTCCSGAKICNRCWSYMTMAVEVMDVGLREDFGFKHILWVYSGRRGVHCWVADDAARALTNEGRGAVADYFSVVAGNDNQAKKVNVATPIHPSLRRAYETLEPLFLEHIITEEGQGLLSDPSRWGKLLATVPEDVRETLHGRWKIGETSPEEKWAELNDELDKRFRKQQGNGKRAKAVDKSSTPEQWRFEVVLEHTYPRLDVNVSKGRNHLLKSPFAVHPKTGRVCVPIDPAKVREFDPFVVPTLGHLQRQIDQYDKDHGEEAKNVSSSDKTDMKGYAKRFEDTFLKGLYKGIRAKKRDRAERVAAVTTAF 1726
MEVDK + AGASG ESKA PVRSKGVSADD+REAFSPDLLRIYYARLFPYEQMYRWLGYSNMPASLPD+ G PQ V+EQADFFSKREFSFTIEDDVYIRYQCFADQKEFEQQVQ+KQPHKIDIGA+FTLPPK NHLAVKPGAFQPVERELVFDIDLTDYDDVRTCCSGAKICNRCWSYMTMAVEVMDVGLR+DFGFKHILWVYSGRRGVHCWVADDAARALTNEGRGAVADYF VVAGNDNQ+KKVNV+ PIHPSLRRAYETLEPLFLEHIITEEGQGLLSDPS WGKLLATVPEDVR+TL GRWK+G +SP +KW EL +E++K+ RKQQ K+ K D+ TPEQWR+EVV EHTYPRLDVNVSKGRNHLLKSPFAVHPKTGRVCVPIDPA VREFDPF VPTLG LQRQID+YDK+HGEE K+VSS +KT+MK Y ++FEDTFL GLYKGIR KKRDR ER+AAVTT F
Sbjct: 6 MEVDKGDQEMVAGASGVESKA-PVRSKGVSADDDREAFSPDLLRIYYARLFPYEQMYRWLGYSNMPASLPDSSGKPQPVDEQADFFSKREFSFTIEDDVYIRYQCFADQKEFEQQVQRKQPHKIDIGAIFTLPPK--NHLAVKPGAFQPVERELVFDIDLTDYDDVRTCCSGAKICNRCWSYMTMAVEVMDVGLRQDFGFKHILWVYSGRRGVHCWVADDAARALTNEGRGAVADYFGVVAGNDNQSKKVNVSLPIHPSLRRAYETLEPLFLEHIITEEGQGLLSDPSHWGKLLATVPEDVRQTLEGRWKMGGSSPADKWEELVEEMEKKGRKQQQLAKKMKPADRPPTPEQWRYEVVFEHTYPRLDVNVSKGRNHLLKSPFAVHPKTGRVCVPIDPAHVREFDPFTVPTLGQLQRQIDKYDKEHGEETKSVSSINKTEMKKYVQQFEDTFLTGLYKGIRVKKRDRTERIAAVTTDF 479
BLAST of mRNA_P-littoralis_Contig191.119.2 vs. uniprot
Match: A0A836CNE6_9STRA (DNA primase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CNE6_9STRA) HSP 1 Score: 456 bits (1173), Expect = 2.830e-150 Identity = 243/468 (51.92%), Postives = 303/468 (64.74%), Query Frame = 2
Query: 386 ADDNREAFSPDLLRIYYARLFPYEQMYRWLGYSNMPASLPDTEGIPQAVEEQADFFSKREFSFTIEDDVYIRYQCFADQKEFEQQVQKKQPHKIDIGAVFTLPPKARNHLAVKPGAFQPVERELVFDIDLTDYDDVRTCCSGAKICNRCWSYMTMAVEVMDVGLREDFGFKHILWVYSGRRGVHCWVADDAARALTNEGRGAVADYFSVVAGNDNQAKKVNVAT-PIHPSLRRAYETLEPLFLEHIITEEGQGLLSDPSRWGKLLATVPED-VRETLHGRWKIGETS--PEEKWAELNDEL----DKRFRKQQGNGKRAKAVDKSSTPEQ----------WRFEVVLEHTYPRLDVNVSKGRNHLLKSPFAVHPKTGRVCVPIDPAKVREFDPFVVPTLGHLQRQIDQYDKDHGEEAKNVSSS---DKTDMKGYAKRFEDTFLKGLYKGIRAKKRDRAERVAAVTTAF 1726
A D+ +FS +LLR+YY RLFPY+QM+RWL Y N P S + + + ++RE SFTI +D+YIRYQCF D+ + Q+QK QPHK+DIGAVF++PP R+H VK GAF+PVERELVFDIDLTDYDDVRTCCSGAK+C RCW YM MA++VMD LR+DFGFKHILWV+SGRRGVHCWV DD AR L N+ R AVA Y SVVAG + + KKV T P+H +L+RAY+ LEP+F E+II E+GQGLL+DP W KLL T+P D V + L W+ + S PE++W E + DK ++ E+ W++E V H YPRLDVNVS NHLLKSPF HPKTGRVCVPI+ A+ EFDPF VPTLG L +ID S ++T + Y + FE +FL+ L IR +RD A+R AAVT F
Sbjct: 2 AADDGPSFSEELLRVYYQRLFPYDQMWRWLCYGNDPLS--------SSGQVDKTYINRREMSFTIANDIYIRYQCFKDKADMVAQIQKMQPHKMDIGAVFSVPP--RDHATVKAGAFKPVERELVFDIDLTDYDDVRTCCSGAKVCGRCWGYMAMAMKVMDASLRDDFGFKHILWVFSGRRGVHCWVCDDNARRLPNDARSAVAAYLSVVAGGEGKGKKVASLTWPLHHALQRAYDALEPMFRENIIGEDGQGLLADPENWRKLLRTIPYDGVADDLDASWQAAQFSQTPEQRWQEAVSAVMARADKEAQRXXXXXXXXXXXXXXXXXEEGKGTATSGYLWKYEAVFTHAYPRLDVNVSTHMNHLLKSPFVAHPKTGRVCVPINCARAEEFDPFSVPTLGQLVAEIDANAASQSSPGSGDSGGADIERTSLHKYVQCFEASFLRPLSAAIRKAQRDAADREAAVTVDF 459
BLAST of mRNA_P-littoralis_Contig191.119.2 vs. uniprot
Match: F0Y4H5_AURAN (DNA primase n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y4H5_AURAN) HSP 1 Score: 442 bits (1136), Expect = 4.150e-145 Identity = 234/443 (52.82%), Postives = 287/443 (64.79%), Query Frame = 2
Query: 407 FSPDLLRIYYARLFPYEQMYRWLGYS-NMPASLPDTEGIPQAVEEQADFFSKREFSFTIEDDVYIRYQCFADQKEFEQQVQKKQPHKIDIGAVFTLPPKARNHLAVKPGAFQPVERELVFDIDLTDYDDVRTCCSGAKICNRCWSYMTMAVEVMDVGLREDFGFKHILWVYSGRRGVHCWVADDAARALTNEGRGAVADYFSVVAGNDNQAKKVNVATPIHPSLRRAYETLEPLFLEHIITEEGQGLLSDPSRWGKLLATVPEDVRETLHGRW-KIGETS-PEEKWAELNDELDKRFRKQQGNGKRAKAVDKSSTPEQWRFEVVLEHTYPRLDVNVSKGRNHLLKSPFAVHPKTGRVCVPIDPAKVREFDPFVVPTLGHLQRQIDQYDKDHGEEAKNVSSSDKTDMKGYAKRFEDTFLKGLYKGIRAKKRDRAERVAAVTTAF 1726
F DLLR+YYARLFPYEQM +WL Y + AS P G A KRE S T+ DDVYIRYQCF D K ++ + K+QPHKIDIGAVF PK +HL++K F+P ERELVFDIDL+DYDDVRTCC GA +C +CW YMT A V + LREDFGF+HI+WVYSGRRGVHCWV D +R LTNE R A+ YFSVV GN+N AKK ++ P+HPSL RAY+ LEPLF++H+I E+GQ LL+ P W KLLAT+PED+ + + W + G+ S P +KW L K G AK ++ E W++EVV H YPRLD NVSK RNHLLKSPFA HPKTGRVCVP D + FDP V TL L +QID +D V +KTD+K + FE +F+ L K + +RD E+ AA+ F
Sbjct: 16 FDADLLRMYYARLFPYEQMCKWLAYQPHGDASTPVGTGSTLA---------KRELSLTLADDVYIRYQCFGDAKAMKELMTKRQPHKIDIGAVFNASPK--DHLSIKN--FRPEERELVFDIDLSDYDDVRTCCQGATVCRKCWQYMTCACRVCESSLREDFGFEHIMWVYSGRRGVHCWVGDAESRKLTNEARLAIIKYFSVVGGNENSAKKTDLQAPLHPSLERAYKLLEPLFIKHVIPEDGQKLLASPEHWSKLLATLPEDIADQIAKHWARAGDASTPAQKWDAL-----KGLCASPDRGSSAKKQKRAQVDELWKYEVVFTHCYPRLDENVSKHRNHLLKSPFAAHPKTGRVCVPFDAKQCAAFDPTAVVTLKDLAKQIDASTED-------VPDLEKTDLKHAVRFFEKSFIDPLLKSLHKGQRDEKEQQAAMVGDF 433
BLAST of mRNA_P-littoralis_Contig191.119.2 vs. uniprot
Match: A0A7S3ZVL9_9STRA (DNA primase n=2 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S3ZVL9_9STRA) HSP 1 Score: 434 bits (1115), Expect = 5.440e-142 Identity = 228/442 (51.58%), Postives = 285/442 (64.48%), Query Frame = 2
Query: 407 FSPDLLRIYYARLFPYEQMYRWLGYSNMPASLPDTEGIPQAVEEQADFFSKREFSFTIEDDVYIRYQCFADQKEFEQQVQKKQPHKIDIGAVFTLPPKARNHLAVKPGAFQPVERELVFDIDLTDYDDVRTCCSGAKICNRCWSYMTMAVEVMDVGLREDFGFKHILWVYSGRRGVHCWVADDAARALTNEGRGAVADYFSVVAGNDNQAKKVNVATPIHPSLRRAYETLEPLFLEHIITEEGQGLLSDPSRWGKLLATVPEDVRETLHGRWKIG--ETSPEEKWAELNDELDKRFRKQQGNGKRAKAVDKSSTPEQWRFEVVLEHTYPRLDVNVSKGRNHLLKSPFAVHPKTGRVCVPIDPAKVREFDPFVVPTLGHLQRQIDQYDKDHGEEAKNVSSSDKTDMKGYAKRFEDTFLKGLYKGIRAKKRDRAERVAAVTTAF 1726
F PDLLR+YYARLFPY+Q +W+ Y++ D G + ++RE S T+ DDVYIRYQCF + KE + + K+QPHKIDIGAVF P R+HL+VK F+P RELVFDIDL+DYDDVRTCC GA +C +CW YMT AV+V + LREDFGF+HI+W+YSGRRGVHCWV D+ AR LTN+ R A+ YFSVV+GN+NQAKK +++P+HPSL RAY LEPLF+EH+I E GQGLL+ RW LL T+PE++ + W+ +TSP EKW L Q AK ++S PE W++E V YPRLD NVSK RNHLLKSPFA HPKTGRVCVP D KV FDP V TL L ++DQ+ D +V DKT + + FE FL + + +RD AE AA+ F
Sbjct: 19 FDPDLLRLYYARLFPYDQWCKWMAYNS------DEPGTGSQL-------ARRELSLTLADDVYIRYQCFTNAKEMKTLMTKRQPHKIDIGAVFNCVP--RDHLSVKN--FRPESRELVFDIDLSDYDDVRTCCQGATVCKKCWQYMTCAVKVCESALREDFGFEHIVWIYSGRRGVHCWVCDETARELTNDARLAIIKYFSVVSGNENQAKKTQLSSPLHPSLERAYRLLEPLFVEHVIGENGQGLLASSERWETLLKTLPEEIGGQISKHWEKNGNDTSPLEKWEALKGLCVSEKPNQ------AKKQKRTSVPELWKYETVFSQCYPRLDENVSKHRNHLLKSPFAAHPKTGRVCVPFDAKKVSTFDPTTVVTLRQLAYELDQHSGD------DVLDLDKTSLAHSVRFFEKDFLHPMMRAWGRARRDDAEYAAALKGDF 431
BLAST of mRNA_P-littoralis_Contig191.119.2 vs. uniprot
Match: K3WL83_GLOUD (DNA primase n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WL83_GLOUD) HSP 1 Score: 425 bits (1093), Expect = 1.000e-138 Identity = 226/445 (50.79%), Postives = 284/445 (63.82%), Query Frame = 2
Query: 401 EAFSPDLLRIYYARLFPYEQMYRWLGYSNMPASLPDTEGIPQAVEEQADFFSKREFSFTIEDDVYIRYQCFADQKEFEQQVQKKQPHKIDIGAVFTLPPKARNHLAVKPGAFQPVERELVFDIDLTDYDDVRTCCSGAKICNRCWSYMTMAVEVMDVGLREDFGFKHILWVYSGRRGVHCWVADDAARALTNEGRGAVADYFSVVAGNDNQAKKVNVATPIHPSLRRAYETLEPLFLEHIITEEGQGLLSDPSRWGKLLATVP-EDVRETLHGRWKI--GETSPEEKWAELNDELDKRFRKQQGNGKRAKAVDKSSTPEQWRF-----EVVLEHTYPRLDVNVSKGRNHLLKSPFAVHPKTGRVCVPIDPAKVREFDPFVVPTLGHLQRQIDQYDKDHGEEAKNVSSSDKTDMKGYAKRFEDTFLKGLYKGIRAKKRDRAERVAA 1711
E FS DLL++YY RLFPYEQM +WL Y + FF +RE SFT+E+D YIRY+ F + +E + + K P KIDIGAVF++ P ++ V F P ERELVFDIDLTDYDD+RTCC GA IC++CW +M AV+VMDV LREDFGF+HI+WVYSGRRG+HCWV+D+ AR LTNE R AV Y S+V GN+N +KV++ P+HPSL RAY LEP+F + I+ EGQG+ + +W KLL VP ED+R L+ RW ++SP EKW EL D ++K K Q N KR + E+V + YPRLD NVSK RNHLLKSPFAVHPKTGRVCVP+D + + FDPF VPTLG LQ +++Q G VS ++T MK Y + FE T LK L + K+RD E AA
Sbjct: 4 EEFSADLLQLYYDRLFPYEQMAKWLTYDGGES-----------------FFFRRELSFTLENDTYIRYKSFHNAEEMKASMTKTLPFKIDIGAVFSVSPADKSK--VNASDFVPEERELVFDIDLTDYDDIRTCCEGASICSKCWQFMIAAVKVMDVSLREDFGFEHIMWVYSGRRGIHCWVSDETARQLTNEARTAVVQYLSLVEGNENSKRKVHLKDPLHPSLDRAYRLLEPMFEDIILGPEGQGIFCEEKQWVKLLDMVPDEDLRSNLNARWSAPSNDSSPREKWLELVDGVEKILAKNQLNNKRQSVGNDQRKRNLMELKTCLQEIVFAYLYPRLDANVSKQRNHLLKSPFAVHPKTGRVCVPVDASTIEAFDPFAVPTLGQLQDELNQDSTMEG-----VSEMERTSMKDYVRFFETTLLKPLDLAAKQKQRDVKESNAA 424
BLAST of mRNA_P-littoralis_Contig191.119.2 vs. uniprot
Match: H3GLH5_PHYRM (DNA primase n=4 Tax=Phytophthora TaxID=4783 RepID=H3GLH5_PHYRM) HSP 1 Score: 422 bits (1084), Expect = 2.150e-137 Identity = 230/456 (50.44%), Postives = 283/456 (62.06%), Query Frame = 2
Query: 398 REAFSPDLLRIYYARLFPYEQMYRWLGYSNMPASLPDTEGIPQAVEEQADFFSKREFSFTIEDDVYIRYQCFADQKEFEQQVQKKQPHKIDIGAVFTLPPKARNHLAVKPGAFQPVERELVFDIDLTDYDDVRTCCSGAKICNRCWSYMTMAVEVMDVGLREDFGFKHILWVYSGRRGVHCWVADDAARALTNEGRGAVADYFSVVAGNDNQAKKVNVATPIHPSLRRAYETLEPLFLEHIITEEGQGLLSDPSRWGKLLATVP-EDVRETLHGRWKIGE--TSPEEKWAELNDELDKRFRKQQGNGKRAKAVDKSSTPE---QWRF----------EVVLEHTYPRLDVNVSKGRNHLLKSPFAVHPKTGRVCVPIDPAKVREFDPFVVPTLGHLQRQIDQYDKDHGEEAKNVSSSDKTDMKGYAKRFEDTFLKGLYKGIRAKKRDRAERVAAVT 1717
+E FS +LL++YY RLFPY QM +WL Y +FF +RE S+T+E+D YIRY+ F +E + + K P KIDIGAVF++ P + V F P +RELVFDIDLTDYDD+RTCC GA ICNRCW +M AVEV++ LREDFGF+H+LWVYSGRRG+HCWVAD+ ARAL NE R AV Y S+V GN+N A+KV + P+HPSL RAY LEP+F I++EEGQG++S W KLLA VP ED+R + RW TSP EKW EL D +DK+ K N R+ + K P RF E+VL + YPRLD NVSK RNHLLKSPFAVHPKTGRVCVPID + + FDPF VPTLG L ++D S + T MK Y FE +FLK L + K+RD E AA+T
Sbjct: 3 QEDFSAELLQLYYDRLFPYRQMTQWLSYDG-----------------GEEFFFRRELSYTLENDTYIRYKAFHTAEELKSSMSKTLPFKIDIGAVFSVSPADKGK--VSAADFTPEQRELVFDIDLTDYDDIRTCCEGAAICNRCWQFMVAAVEVLNAALREDFGFEHLLWVYSGRRGIHCWVADEGARALENEARSAVVGYLSLVEGNENSARKVKLREPLHPSLDRAYRLLEPMFEGIILSEEGQGIMSSEKEWAKLLAMVPDEDIRANMTRRWGATNCSTSPGEKWRELRDAVDKQVLKN-ANAARSGSSLKRPAPNGDANKRFAAAELRTCLQEIVLAYLYPRLDANVSKQRNHLLKSPFAVHPKTGRVCVPIDVSSMEAFDPFKVPTLGQLHEELD-------------SDAPDTSMKEYVDFFESSFLKPLAVAAKRKERDARESDAAMT 425
BLAST of mRNA_P-littoralis_Contig191.119.2 vs. uniprot
Match: A0A067BVH8_SAPPC (DNA primase n=2 Tax=Saprolegnia TaxID=4769 RepID=A0A067BVH8_SAPPC) HSP 1 Score: 419 bits (1077), Expect = 1.960e-136 Identity = 228/447 (51.01%), Postives = 286/447 (63.98%), Query Frame = 2
Query: 401 EAFSPDLLRIYYARLFPYEQMYRWLGYS-NMPASLPDTEGIPQAVEEQADFFSKREFSFTIEDDVYIRYQCFADQKEFEQQVQKKQPHKIDIGAVFTLPPKARNHLAVKPGAFQPVERELVFDIDLTDYDDVRTCCSGAKICNRCWSYMTMAVEVMDVGLREDFGFKHILWVYSGRRGVHCWVADDAARALTNEGRGAVADYFSVVAGNDNQAKKVNVATPIHPSLRRAYETLEPLFLEHIITEEGQGLLSDPSRWGKLLATVP-EDVRETLHGRWKIGET--SPEEKWAEL----NDELDKRFRKQQGNGKRAKAVDKSSTPEQWRFEVVLEHTYPRLDVNVSKGRNHLLKSPFAVHPKTGRVCVPIDPAKVREFDPFVVPTLGHLQRQIDQYDKDHGEEAKNVSSSDKTDMKGYAKRFEDTFLKGLYKGIRAKKRDRAERVAAVT 1717
E+FSP+LL +YY RLFPYE M +WLGY +M P TE ++REFSFT+E+DVYIRY+ F D EF+ +++K P KIDIGAVFT+ P + V F P ERELVFD+DLTDYDD+RTCC AKIC RCW +M AV+V+D LREDFGF+H++WVYSGRRG+HCWV+D AR LTN+ R AV Y + V GN+N +KV + P+HPSL RAY LEPLF + I++++GQG+LS P W KLL VP ED+R T H +W T SP KWA L +D L + RKQ G+ KR + P E+V + YPRLD NVSK RNHLLKSPFAVHPKTGRVCVPIDP K+ FDP VPTL L+RQ+ +GE ++V Y K F+ F+ + + +K+ AE AA T
Sbjct: 4 ESFSPELLGLYYDRLFPYELMTKWLGYDCSMDKGGPGTE-----------LLARREFSFTLENDVYIRYKAFRDADEFKTEMKKLMPFKIDIGAVFTVSPADKGK--VDAAKFVPEERELVFDVDLTDYDDIRTCCQDAKICARCWRFMVAAVKVLDTALREDFGFQHLMWVYSGRRGIHCWVSDYTARMLTNDARSAVVQYLTTVEGNENTKRKVVLRDPLHPSLERAYTILEPLFHDIILSDDGQGILSSPEHWKKLLEMVPDEDIRATFHNKWLKTTTTESPATKWANLKAAIHDALHSKKRKQMGDDKRRLLC--TCIP-----EIVFAYLYPRLDANVSKQRNHLLKSPFAVHPKTGRVCVPIDPRKIDIFDPDTVPTLADLERQL------NGEATEHVKP-----FTDYIKLFDAKFIHPIQLALIKQKKVLAETQAAAT 419
BLAST of mRNA_P-littoralis_Contig191.119.2 vs. uniprot
Match: K8Z712_NANGC (DNA primase n=3 Tax=Monodopsidaceae TaxID=425072 RepID=K8Z712_NANGC) HSP 1 Score: 420 bits (1080), Expect = 2.660e-136 Identity = 212/392 (54.08%), Postives = 272/392 (69.39%), Query Frame = 2
Query: 395 NREAFSPDLLRIYYARLFPYEQMYRWLGYSNMPASLPDTEGIPQAVEEQADFFSKREFSFTIEDDVYIRYQCFADQKEFEQQVQKKQPHKIDIGAVFTLPPKARNHLAVKPGAFQPVERELVFDIDLTDYDDVRTCCSGAKICNRCWSYMTMAVEVMDVGLREDFGFKHILWVYSGRRGVHCWVADDAARALTNEGRGAVADYFSVVAGND-NQAKKVNVATPIHPSLRRAYETLEPLFLEHIITEEGQGLLSDPSRWGKLLATVPEDVRETLHGRWKIGETSPEEKWAELNDELDKRFRKQ-QGNGKRAKAVDKSSTP----EQWRFEVVLEHTYPRLDVNVSKGRNHLLKSPFAVHPKTGRVCVPIDPAKVREFDPFVVPTLGHLQRQID 1552
N + FSP+LLR +Y RLFPY+ M++WL Y N P + D I + D+F+ REFSFTI DD+YIRYQ F D E E +QKKQPHKIDIGAVFTLPPK +H VK AF+PVEREL+FDID+TDYDD+R+CC+GAKIC +CW +MTMAV+V+D LREDFGF++ILWVYSGRRGVHCWV D ARAL+N+GR AV +Y S+ GN+ ++ K ++ P+HPS RA++ LEP+F ++ E GQG+L + W LL T+P++ R T+ +++W E+ ++ GN +R ++ + W++EVV ++ YPRLDVNVSKG NHLLKSPFAVHPKTGRVCVPIDP V FDPF VPTL L QID
Sbjct: 19 NDQEFSPELLRFFYNRLFPYQPMFKWLSYGNDPDN--DAAHIVR------DYFACREFSFTINDDIYIRYQSFRDASEMESAIQKKQPHKIDIGAVFTLPPK--DHHTVKAEAFKPVERELIFDIDMTDYDDIRSCCTGAKICPKCWVFMTMAVKVVDTALREDFGFRYILWVYSGRRGVHCWVCDPNARALSNDGRSAVVEYLSLPRGNEKSKGKNGGLSWPLHPSFTRAFDILEPMFESGVLGEAGQGVLDSENSWDTLLDTLPDEDLANRLRREMRRLTNAQDRWLEIKSQVRAASSAHASGNARRQSRGGRAGNGLFALDLWKYEVVFQYCYPRLDVNVSKGTNHLLKSPFAVHPKTGRVCVPIDPEDVDNFDPFRVPTLKALAAQID 400
BLAST of mRNA_P-littoralis_Contig191.119.2 vs. uniprot
Match: A0A1V9ZZI9_9STRA (DNA primase n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9ZZI9_9STRA) HSP 1 Score: 415 bits (1066), Expect = 7.340e-135 Identity = 214/442 (48.42%), Postives = 284/442 (64.25%), Query Frame = 2
Query: 401 EAFSPDLLRIYYARLFPYEQMYRWLGYSNMPASLPDTEGIPQAVEEQADFFSKREFSFTIEDDVYIRYQCFADQKEFEQQVQKKQPHKIDIGAVFTLPPKARNHLAVKPGAFQPVERELVFDIDLTDYDDVRTCCSGAKICNRCWSYMTMAVEVMDVGLREDFGFKHILWVYSGRRGVHCWVADDAARALTNEGRGAVADYFSVVAGNDNQAKKVNVATPIHPSLRRAYETLEPLFLEHIITEEGQGLLSDPSRWGKLLATVP-EDVRETLHGRWKIGETSPEEKWAELNDELDK--RFRKQQGNGKRAKAVDKSSTPEQWRFEVVLEHTYPRLDVNVSKGRNHLLKSPFAVHPKTGRVCVPIDPAKVREFDPFVVPTLGHLQRQIDQYDKDHGEEAKNVSSSDKTDMKGYAKRFEDTFLKGLYKGIRAKKRDRAERVAAVT 1717
EAFSP+LL +YY RLFPY+QM WLGY+ + + +REFSFT+E+D Y+RY+ F D EF+ ++K QP+KIDIGAVF++ + V F P ERELVFD+DLTDYDD+RTCC A IC RCW +MT AV+V+D LREDFGF+H+LWVYSGRRG+HCWV+D +R LTNE R AV Y +VV GN+N +KV + P+HPSL RAY LEP+F + I++E GQ +L P W KLL VP E++R LH +W + P KW+EL ++ + +K++ N +R + + E+VL + YPRLD NVSK RNHLLKSPFAVHPKTGRVCVPID K+ +FDP VPTL L+R+++ D + KN + Y K FE +F++ + + + +K+ AE AAVT
Sbjct: 3 EAFSPELLALYYDRLFPYDQMTNWLGYATITGP--------------TELLYRREFSFTLENDQYLRYKAFRDADEFKSAMKKLQPYKIDIGAVFSVSVSPADKGKVDANKFIPEERELVFDVDLTDYDDIRTCCKEANICKRCWQFMTAAVKVLDTALREDFGFQHLLWVYSGRRGIHCWVSDYPSRMLTNEARSAVVQYLTVVEGNENTKRKVILKDPLHPSLERAYSILEPMFYDVILSESGQDILGSPDSWSKLLEMVPDEELRSNLHNKWLNNSSPPRAKWSELKASVEAIIKDKKRKINDERRRNLRTCLA------EIVLAYLYPRLDANVSKQRNHLLKSPFAVHPKTGRVCVPIDARKIDDFDPMQVPTLLDLERELNAPD-----DKKNAQT-----FANYVKFFESSFIQPIQRSLIKQKKTLAEAQAAVT 414
BLAST of mRNA_P-littoralis_Contig191.119.2 vs. uniprot
Match: A0A8K1FFX1_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FFX1_PYTOL) HSP 1 Score: 414 bits (1064), Expect = 2.120e-134 Identity = 222/447 (49.66%), Postives = 278/447 (62.19%), Query Frame = 2
Query: 401 EAFSPDLLRIYYARLFPYEQMYRWLGYSNMPASLPDTEGIPQAVEEQADFFSKREFSFTIEDDVYIRYQCFADQKEFEQQVQKKQPHKIDIGAVFTLPPKARNHLAVKPGAFQPVERELVFDIDLTDYDDVRTCCSGAKICNRCWSYMTMAVEVMDVGLREDFGFKHILWVYSGRRGVHCWVADDAARALTNEGRGAVADYFSVVAGNDNQAKKVNVATPIHPSLRRAYETLEPLFLEHIITEEGQGLLSDPSRWGKLLATVP-EDVRETLHGRWKI--GETSPEEKWAELNDELDKRFRKQQGNGKRAKAVDKSSTPEQWRF-----EVVLEHTYPRLDVNVSKGRNHLLKSPFAVHPKTGRVCVPIDPAKVREFDPFVVPTLGHLQRQIDQYDKDHGEEAKNVSSSDKTDMKGYAKRFEDTFLKGLYKGIRAKKRDRAERVAAVT 1717
E FS DLL++YY RLFPYEQM +WL Y + +RE SFT+E+D YIRY+ F + E + K P KIDIGAVF++ P + V F ERELVFDIDLTDYDD+RTCC GA IC +CW +M AV+VMD LREDFGF+HI+WVYSGRRG+HCWV+D+ AR LTN+ R AV Y S+V GN+N +KV++ P+HPSL RAY LEP+F E I+++EGQG+ +W KLL +P ED+R+ L RW +SP EKW E+ D ++K N KR + E+V + YPRLD NVSK RNHLLKSPFAVHPKTGRVCVP+D + EFDPF VPTLG LQ ++++ DK G S D+T MK + K FEDT LK L + K+RD E AA+T
Sbjct: 4 EEFSTDLLQLYYDRLFPYEQMTKWLAYDGGET-----------------YLFRRELSFTLENDTYIRYKAFHNADEMRSSMTKMLPFKIDIGAVFSVSPADKGK--VNANDFTADERELVFDIDLTDYDDIRTCCEGASICPKCWRFMVAAVKVMDAALREDFGFQHIMWVYSGRRGIHCWVSDEFARGLTNDARTAVVQYLSLVEGNENAKRKVHLKEPLHPSLDRAYRILEPMFEELILSDEGQGVFCSEKQWIKLLDMIPDEDLRDQLLHRWSSLSCSSSPREKWMEVVDGVEKIVAMGLNNNKRQSLQSDQRKRNIYELRTCLQEIVFAYLYPRLDANVSKQRNHLLKSPFAVHPKTGRVCVPVDADNIEEFDPFTVPTLGQLQDELNKNDKAGG------SDIDRTSMKEHVKFFEDTLLKPLEVAAKQKQRDAKESNAAMT 425 The following BLAST results are available for this feature:
BLAST of mRNA_P-littoralis_Contig191.119.2 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-littoralis_Contig191.119.2 >prot_P-littoralis_Contig191.119.2 ID=prot_P-littoralis_Contig191.119.2|Name=mRNA_P-littoralis_Contig191.119.2|organism=Pylaiella littoralis U1_48|type=polypeptide|length=481bp MPSSMEVDKENVGSAGASGAESKAAPVRSKGVSADDNREAFSPDLLRIYYback to top mRNA from alignment at P-littoralis_Contig191:414871..423953+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-littoralis_Contig191.119.2 ID=mRNA_P-littoralis_Contig191.119.2|Name=mRNA_P-littoralis_Contig191.119.2|organism=Pylaiella littoralis U1_48|type=mRNA|length=9083bp|location=Sequence derived from alignment at P-littoralis_Contig191:414871..423953+ (Pylaiella littoralis U1_48)back to top Coding sequence (CDS) from alignment at P-littoralis_Contig191:414871..423953+ >mRNA_P-littoralis_Contig191.119.2 ID=mRNA_P-littoralis_Contig191.119.2|Name=mRNA_P-littoralis_Contig191.119.2|organism=Pylaiella littoralis U1_48|type=CDS|length=1443bp|location=Sequence derived from alignment at P-littoralis_Contig191:414871..423953+ (Pylaiella littoralis U1_48)back to top |